data_9A2S # _entry.id 9A2S # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Graziadei, A." 2 "Dau, T." 3 "Brock, O." 4 "Rappsilber, J." 5 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000177 PDBDEV_00000177 ? PDB 9A2S pdb_00009a2s 10.2210/pdb9a2s/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A2S _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2023-02-03 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _ihm_entry_collection.id PDBDEV_G_1000001 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000001 _ihm_entry_collection_mapping.entry_id 9A2S # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nature Biotechnology" _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume . _citation.page_first . _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41587-023-01704-z _citation.pdbx_database_id_PubMed 36941363 _citation.title "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning" _citation.year 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Graziadei, A." 2 1 "Dau, T." 3 1 "Brock, O." 4 1 "Rappsilber, J." 5 # _entity.details . _entity.formula_weight 58647.85 _entity.id 1 _entity.pdbx_description P0ABB4 _entity.pdbx_number_of_molecules 1 _entity.src_method NAT _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL _entity_poly.pdbx_seq_one_letter_code_can MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . ALA 2 1 . THR 3 1 . GLY 4 1 . LYS 5 1 . ILE 6 1 . VAL 7 1 . GLN 8 1 . VAL 9 1 . ILE 10 1 . GLY 11 1 . ALA 12 1 . VAL 13 1 . VAL 14 1 . ASP 15 1 . VAL 16 1 . GLU 17 1 . PHE 18 1 . PRO 19 1 . GLN 20 1 . ASP 21 1 . ALA 22 1 . VAL 23 1 . PRO 24 1 . ARG 25 1 . VAL 26 1 . TYR 27 1 . ASP 28 1 . ALA 29 1 . LEU 30 1 . GLU 31 1 . VAL 32 1 . GLN 33 1 . ASN 34 1 . GLY 35 1 . ASN 36 1 . GLU 37 1 . ARG 38 1 . LEU 39 1 . VAL 40 1 . LEU 41 1 . GLU 42 1 . VAL 43 1 . GLN 44 1 . GLN 45 1 . GLN 46 1 . LEU 47 1 . GLY 48 1 . GLY 49 1 . GLY 50 1 . ILE 51 1 . VAL 52 1 . ARG 53 1 . THR 54 1 . ILE 55 1 . ALA 56 1 . MET 57 1 . GLY 58 1 . SER 59 1 . SER 60 1 . ASP 61 1 . GLY 62 1 . LEU 63 1 . ARG 64 1 . ARG 65 1 . GLY 66 1 . LEU 67 1 . ASP 68 1 . VAL 69 1 . LYS 70 1 . ASP 71 1 . LEU 72 1 . GLU 73 1 . HIS 74 1 . PRO 75 1 . ILE 76 1 . GLU 77 1 . VAL 78 1 . PRO 79 1 . VAL 80 1 . GLY 81 1 . LYS 82 1 . ALA 83 1 . THR 84 1 . LEU 85 1 . GLY 86 1 . ARG 87 1 . ILE 88 1 . MET 89 1 . ASN 90 1 . VAL 91 1 . LEU 92 1 . GLY 93 1 . GLU 94 1 . PRO 95 1 . VAL 96 1 . ASP 97 1 . MET 98 1 . LYS 99 1 . GLY 100 1 . GLU 101 1 . ILE 102 1 . GLY 103 1 . GLU 104 1 . GLU 105 1 . GLU 106 1 . ARG 107 1 . TRP 108 1 . ALA 109 1 . ILE 110 1 . HIS 111 1 . ARG 112 1 . ALA 113 1 . ALA 114 1 . PRO 115 1 . SER 116 1 . TYR 117 1 . GLU 118 1 . GLU 119 1 . LEU 120 1 . SER 121 1 . ASN 122 1 . SER 123 1 . GLN 124 1 . GLU 125 1 . LEU 126 1 . LEU 127 1 . GLU 128 1 . THR 129 1 . GLY 130 1 . ILE 131 1 . LYS 132 1 . VAL 133 1 . ILE 134 1 . ASP 135 1 . LEU 136 1 . MET 137 1 . CYS 138 1 . PRO 139 1 . PHE 140 1 . ALA 141 1 . LYS 142 1 . GLY 143 1 . GLY 144 1 . LYS 145 1 . VAL 146 1 . GLY 147 1 . LEU 148 1 . PHE 149 1 . GLY 150 1 . GLY 151 1 . ALA 152 1 . GLY 153 1 . VAL 154 1 . GLY 155 1 . LYS 156 1 . THR 157 1 . VAL 158 1 . ASN 159 1 . MET 160 1 . MET 161 1 . GLU 162 1 . LEU 163 1 . ILE 164 1 . ARG 165 1 . ASN 166 1 . ILE 167 1 . ALA 168 1 . ILE 169 1 . GLU 170 1 . HIS 171 1 . SER 172 1 . GLY 173 1 . TYR 174 1 . SER 175 1 . VAL 176 1 . PHE 177 1 . ALA 178 1 . GLY 179 1 . VAL 180 1 . GLY 181 1 . GLU 182 1 . ARG 183 1 . THR 184 1 . ARG 185 1 . GLU 186 1 . GLY 187 1 . ASN 188 1 . ASP 189 1 . PHE 190 1 . TYR 191 1 . HIS 192 1 . GLU 193 1 . MET 194 1 . THR 195 1 . ASP 196 1 . SER 197 1 . ASN 198 1 . VAL 199 1 . ILE 200 1 . ASP 201 1 . LYS 202 1 . VAL 203 1 . SER 204 1 . LEU 205 1 . VAL 206 1 . TYR 207 1 . GLY 208 1 . GLN 209 1 . MET 210 1 . ASN 211 1 . GLU 212 1 . PRO 213 1 . PRO 214 1 . GLY 215 1 . ASN 216 1 . ARG 217 1 . LEU 218 1 . ARG 219 1 . VAL 220 1 . ALA 221 1 . LEU 222 1 . THR 223 1 . GLY 224 1 . LEU 225 1 . THR 226 1 . MET 227 1 . ALA 228 1 . GLU 229 1 . LYS 230 1 . PHE 231 1 . ARG 232 1 . ASP 233 1 . GLU 234 1 . GLY 235 1 . ARG 236 1 . ASP 237 1 . VAL 238 1 . LEU 239 1 . LEU 240 1 . PHE 241 1 . VAL 242 1 . ASP 243 1 . ASN 244 1 . ILE 245 1 . TYR 246 1 . ARG 247 1 . TYR 248 1 . THR 249 1 . LEU 250 1 . ALA 251 1 . GLY 252 1 . THR 253 1 . GLU 254 1 . VAL 255 1 . SER 256 1 . ALA 257 1 . LEU 258 1 . LEU 259 1 . GLY 260 1 . ARG 261 1 . MET 262 1 . PRO 263 1 . SER 264 1 . ALA 265 1 . VAL 266 1 . GLY 267 1 . TYR 268 1 . GLN 269 1 . PRO 270 1 . THR 271 1 . LEU 272 1 . ALA 273 1 . GLU 274 1 . GLU 275 1 . MET 276 1 . GLY 277 1 . VAL 278 1 . LEU 279 1 . GLN 280 1 . GLU 281 1 . ARG 282 1 . ILE 283 1 . THR 284 1 . SER 285 1 . THR 286 1 . LYS 287 1 . THR 288 1 . GLY 289 1 . SER 290 1 . ILE 291 1 . THR 292 1 . SER 293 1 . VAL 294 1 . GLN 295 1 . ALA 296 1 . VAL 297 1 . TYR 298 1 . VAL 299 1 . PRO 300 1 . ALA 301 1 . ASP 302 1 . ASP 303 1 . LEU 304 1 . THR 305 1 . ASP 306 1 . PRO 307 1 . SER 308 1 . PRO 309 1 . ALA 310 1 . THR 311 1 . THR 312 1 . PHE 313 1 . ALA 314 1 . HIS 315 1 . LEU 316 1 . ASP 317 1 . ALA 318 1 . THR 319 1 . VAL 320 1 . VAL 321 1 . LEU 322 1 . SER 323 1 . ARG 324 1 . GLN 325 1 . ILE 326 1 . ALA 327 1 . SER 328 1 . LEU 329 1 . GLY 330 1 . ILE 331 1 . TYR 332 1 . PRO 333 1 . ALA 334 1 . VAL 335 1 . ASP 336 1 . PRO 337 1 . LEU 338 1 . ASP 339 1 . SER 340 1 . THR 341 1 . SER 342 1 . ARG 343 1 . GLN 344 1 . LEU 345 1 . ASP 346 1 . PRO 347 1 . LEU 348 1 . VAL 349 1 . VAL 350 1 . GLY 351 1 . GLN 352 1 . GLU 353 1 . HIS 354 1 . TYR 355 1 . ASP 356 1 . THR 357 1 . ALA 358 1 . ARG 359 1 . GLY 360 1 . VAL 361 1 . GLN 362 1 . SER 363 1 . ILE 364 1 . LEU 365 1 . GLN 366 1 . ARG 367 1 . TYR 368 1 . GLN 369 1 . GLU 370 1 . LEU 371 1 . LYS 372 1 . ASP 373 1 . ILE 374 1 . ILE 375 1 . ALA 376 1 . ILE 377 1 . LEU 378 1 . GLY 379 1 . MET 380 1 . ASP 381 1 . GLU 382 1 . LEU 383 1 . SER 384 1 . GLU 385 1 . GLU 386 1 . ASP 387 1 . LYS 388 1 . LEU 389 1 . VAL 390 1 . VAL 391 1 . ALA 392 1 . ARG 393 1 . ALA 394 1 . ARG 395 1 . LYS 396 1 . ILE 397 1 . GLN 398 1 . ARG 399 1 . PHE 400 1 . LEU 401 1 . SER 402 1 . GLN 403 1 . PRO 404 1 . PHE 405 1 . PHE 406 1 . VAL 407 1 . ALA 408 1 . GLU 409 1 . VAL 410 1 . PHE 411 1 . THR 412 1 . GLY 413 1 . SER 414 1 . PRO 415 1 . GLY 416 1 . LYS 417 1 . TYR 418 1 . VAL 419 1 . SER 420 1 . LEU 421 1 . LYS 422 1 . ASP 423 1 . THR 424 1 . ILE 425 1 . ARG 426 1 . GLY 427 1 . PHE 428 1 . LYS 429 1 . GLY 430 1 . ILE 431 1 . MET 432 1 . GLU 433 1 . GLY 434 1 . GLU 435 1 . TYR 436 1 . ASP 437 1 . HIS 438 1 . LEU 439 1 . PRO 440 1 . GLU 441 1 . GLN 442 1 . ALA 443 1 . PHE 444 1 . TYR 445 1 . MET 446 1 . VAL 447 1 . GLY 448 1 . SER 449 1 . ILE 450 1 . GLU 451 1 . GLU 452 1 . ALA 453 1 . VAL 454 1 . GLU 455 1 . LYS 456 1 . ALA 457 1 . LYS 458 1 . LYS 459 1 . LEU 460 # _ihm_chemical_component_descriptor.auth_name L-Photo-Leucine _ihm_chemical_component_descriptor.chemical_name . _ihm_chemical_component_descriptor.common_name L-Photo-Leucine _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C5H9N3O2/c1-5(7-8-5)2-3(6)4(9)10/h3H,2,6H2,1H3,(H,9,10)/t3-/m0/s1 _ihm_chemical_component_descriptor.inchi_key MJRDGTVDJKACQZ-VKHMYHEASA-N _ihm_chemical_component_descriptor.smiles CC1(C[C@H](N)C(O)=O)N=N1 _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 GLU LEU 1 . P0ABB4 P0ABB4 1 1 1 1 1 L-Photo-Leucine 128 421 LEU LEU 1 . P0ABB4 P0ABB4 1 1 2 2 1 L-Photo-Leucine 127 421 LEU SER 1 . P0ABB4 P0ABB4 1 1 3 3 1 L-Photo-Leucine 120 172 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . GLU LEU . 10 1 1 1 1 by-residue NO 0.05 "upper bound" 128 421 . . A A . . LEU LEU . 10 1 1 2 2 by-residue NO 0.05 "upper bound" 127 421 . . A A . . LEU SER . 10 1 1 3 3 by-residue NO 0.05 "upper bound" 120 172 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code JPST001851 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name jPOSTrepo _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # _ihm_entity_poly_segment.comp_id_begin MET _ihm_entity_poly_segment.comp_id_end LEU _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 460 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 1 5 1 6 1 7 1 8 1 9 1 10 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 1 5 . 1 1 1 6 . 1 1 1 7 . 1 1 1 8 . 1 1 1 9 . 1 1 1 10 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description P0ABB4 _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag YES _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 10 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id . _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method "AlphaLink with 10 msa subsamples" _ihm_modeling_protocol_details.step_name AlphaLink _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative modeling using in-cell photo-crosslinking mass spectrometry and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "Integrative model" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description P0ABB4 _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # _software.citation_id 1 _software.classification "model building" _software.description "protein structure prediction by deep learning assisted by experimental distance restraints" _software.location https://github.com/lhatsk/AlphaLink _software.name AlphaLink _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A2S _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.title "Model of E. coli AtpD by in-cell photo-crosslinking MS and deep learning" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details P0ABB4 _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code ATPB_ECOLI _struct_ref.db_name UNP _struct_ref.details "ATP synthase subunit beta OS=Escherichia coli (strain K12) OX=83333 GN=atpD PE=1 SV=2" _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P0ABB4 _struct_ref.pdbx_seq_one_letter_code MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.db_align_end 460 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 460 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 ALA 2 2 ALA ALA A . A 1 3 THR 3 3 THR THR A . A 1 4 GLY 4 4 GLY GLY A . A 1 5 LYS 5 5 LYS LYS A . A 1 6 ILE 6 6 ILE ILE A . A 1 7 VAL 7 7 VAL VAL A . A 1 8 GLN 8 8 GLN GLN A . A 1 9 VAL 9 9 VAL VAL A . A 1 10 ILE 10 10 ILE ILE A . A 1 11 GLY 11 11 GLY GLY A . A 1 12 ALA 12 12 ALA ALA A . A 1 13 VAL 13 13 VAL VAL A . A 1 14 VAL 14 14 VAL VAL A . A 1 15 ASP 15 15 ASP ASP A . A 1 16 VAL 16 16 VAL VAL A . A 1 17 GLU 17 17 GLU GLU A . A 1 18 PHE 18 18 PHE PHE A . A 1 19 PRO 19 19 PRO PRO A . A 1 20 GLN 20 20 GLN GLN A . A 1 21 ASP 21 21 ASP ASP A . A 1 22 ALA 22 22 ALA ALA A . A 1 23 VAL 23 23 VAL VAL A . A 1 24 PRO 24 24 PRO PRO A . A 1 25 ARG 25 25 ARG ARG A . A 1 26 VAL 26 26 VAL VAL A . A 1 27 TYR 27 27 TYR TYR A . A 1 28 ASP 28 28 ASP ASP A . A 1 29 ALA 29 29 ALA ALA A . A 1 30 LEU 30 30 LEU LEU A . A 1 31 GLU 31 31 GLU GLU A . A 1 32 VAL 32 32 VAL VAL A . A 1 33 GLN 33 33 GLN GLN A . A 1 34 ASN 34 34 ASN ASN A . A 1 35 GLY 35 35 GLY GLY A . A 1 36 ASN 36 36 ASN ASN A . A 1 37 GLU 37 37 GLU GLU A . A 1 38 ARG 38 38 ARG ARG A . A 1 39 LEU 39 39 LEU LEU A . A 1 40 VAL 40 40 VAL VAL A . A 1 41 LEU 41 41 LEU LEU A . A 1 42 GLU 42 42 GLU GLU A . A 1 43 VAL 43 43 VAL VAL A . A 1 44 GLN 44 44 GLN GLN A . A 1 45 GLN 45 45 GLN GLN A . A 1 46 GLN 46 46 GLN GLN A . A 1 47 LEU 47 47 LEU LEU A . A 1 48 GLY 48 48 GLY GLY A . A 1 49 GLY 49 49 GLY GLY A . A 1 50 GLY 50 50 GLY GLY A . A 1 51 ILE 51 51 ILE ILE A . A 1 52 VAL 52 52 VAL VAL A . A 1 53 ARG 53 53 ARG ARG A . A 1 54 THR 54 54 THR THR A . A 1 55 ILE 55 55 ILE ILE A . A 1 56 ALA 56 56 ALA ALA A . A 1 57 MET 57 57 MET MET A . A 1 58 GLY 58 58 GLY GLY A . A 1 59 SER 59 59 SER SER A . A 1 60 SER 60 60 SER SER A . A 1 61 ASP 61 61 ASP ASP A . A 1 62 GLY 62 62 GLY GLY A . A 1 63 LEU 63 63 LEU LEU A . A 1 64 ARG 64 64 ARG ARG A . A 1 65 ARG 65 65 ARG ARG A . A 1 66 GLY 66 66 GLY GLY A . A 1 67 LEU 67 67 LEU LEU A . A 1 68 ASP 68 68 ASP ASP A . A 1 69 VAL 69 69 VAL VAL A . A 1 70 LYS 70 70 LYS LYS A . A 1 71 ASP 71 71 ASP ASP A . A 1 72 LEU 72 72 LEU LEU A . A 1 73 GLU 73 73 GLU GLU A . A 1 74 HIS 74 74 HIS HIS A . A 1 75 PRO 75 75 PRO PRO A . A 1 76 ILE 76 76 ILE ILE A . A 1 77 GLU 77 77 GLU GLU A . A 1 78 VAL 78 78 VAL VAL A . A 1 79 PRO 79 79 PRO PRO A . A 1 80 VAL 80 80 VAL VAL A . A 1 81 GLY 81 81 GLY GLY A . A 1 82 LYS 82 82 LYS LYS A . A 1 83 ALA 83 83 ALA ALA A . A 1 84 THR 84 84 THR THR A . A 1 85 LEU 85 85 LEU LEU A . A 1 86 GLY 86 86 GLY GLY A . A 1 87 ARG 87 87 ARG ARG A . A 1 88 ILE 88 88 ILE ILE A . A 1 89 MET 89 89 MET MET A . A 1 90 ASN 90 90 ASN ASN A . A 1 91 VAL 91 91 VAL VAL A . A 1 92 LEU 92 92 LEU LEU A . A 1 93 GLY 93 93 GLY GLY A . A 1 94 GLU 94 94 GLU GLU A . A 1 95 PRO 95 95 PRO PRO A . A 1 96 VAL 96 96 VAL VAL A . A 1 97 ASP 97 97 ASP ASP A . A 1 98 MET 98 98 MET MET A . A 1 99 LYS 99 99 LYS LYS A . A 1 100 GLY 100 100 GLY GLY A . A 1 101 GLU 101 101 GLU GLU A . A 1 102 ILE 102 102 ILE ILE A . A 1 103 GLY 103 103 GLY GLY A . A 1 104 GLU 104 104 GLU GLU A . A 1 105 GLU 105 105 GLU GLU A . A 1 106 GLU 106 106 GLU GLU A . A 1 107 ARG 107 107 ARG ARG A . A 1 108 TRP 108 108 TRP TRP A . A 1 109 ALA 109 109 ALA ALA A . A 1 110 ILE 110 110 ILE ILE A . A 1 111 HIS 111 111 HIS HIS A . A 1 112 ARG 112 112 ARG ARG A . A 1 113 ALA 113 113 ALA ALA A . A 1 114 ALA 114 114 ALA ALA A . A 1 115 PRO 115 115 PRO PRO A . A 1 116 SER 116 116 SER SER A . A 1 117 TYR 117 117 TYR TYR A . A 1 118 GLU 118 118 GLU GLU A . A 1 119 GLU 119 119 GLU GLU A . A 1 120 LEU 120 120 LEU LEU A . A 1 121 SER 121 121 SER SER A . A 1 122 ASN 122 122 ASN ASN A . A 1 123 SER 123 123 SER SER A . A 1 124 GLN 124 124 GLN GLN A . A 1 125 GLU 125 125 GLU GLU A . A 1 126 LEU 126 126 LEU LEU A . A 1 127 LEU 127 127 LEU LEU A . A 1 128 GLU 128 128 GLU GLU A . A 1 129 THR 129 129 THR THR A . A 1 130 GLY 130 130 GLY GLY A . A 1 131 ILE 131 131 ILE ILE A . A 1 132 LYS 132 132 LYS LYS A . A 1 133 VAL 133 133 VAL VAL A . A 1 134 ILE 134 134 ILE ILE A . A 1 135 ASP 135 135 ASP ASP A . A 1 136 LEU 136 136 LEU LEU A . A 1 137 MET 137 137 MET MET A . A 1 138 CYS 138 138 CYS CYS A . A 1 139 PRO 139 139 PRO PRO A . A 1 140 PHE 140 140 PHE PHE A . A 1 141 ALA 141 141 ALA ALA A . A 1 142 LYS 142 142 LYS LYS A . A 1 143 GLY 143 143 GLY GLY A . A 1 144 GLY 144 144 GLY GLY A . A 1 145 LYS 145 145 LYS LYS A . A 1 146 VAL 146 146 VAL VAL A . A 1 147 GLY 147 147 GLY GLY A . A 1 148 LEU 148 148 LEU LEU A . A 1 149 PHE 149 149 PHE PHE A . A 1 150 GLY 150 150 GLY GLY A . A 1 151 GLY 151 151 GLY GLY A . A 1 152 ALA 152 152 ALA ALA A . A 1 153 GLY 153 153 GLY GLY A . A 1 154 VAL 154 154 VAL VAL A . A 1 155 GLY 155 155 GLY GLY A . A 1 156 LYS 156 156 LYS LYS A . A 1 157 THR 157 157 THR THR A . A 1 158 VAL 158 158 VAL VAL A . A 1 159 ASN 159 159 ASN ASN A . A 1 160 MET 160 160 MET MET A . A 1 161 MET 161 161 MET MET A . A 1 162 GLU 162 162 GLU GLU A . A 1 163 LEU 163 163 LEU LEU A . A 1 164 ILE 164 164 ILE ILE A . A 1 165 ARG 165 165 ARG ARG A . A 1 166 ASN 166 166 ASN ASN A . A 1 167 ILE 167 167 ILE ILE A . A 1 168 ALA 168 168 ALA ALA A . A 1 169 ILE 169 169 ILE ILE A . A 1 170 GLU 170 170 GLU GLU A . A 1 171 HIS 171 171 HIS HIS A . A 1 172 SER 172 172 SER SER A . A 1 173 GLY 173 173 GLY GLY A . A 1 174 TYR 174 174 TYR TYR A . A 1 175 SER 175 175 SER SER A . A 1 176 VAL 176 176 VAL VAL A . A 1 177 PHE 177 177 PHE PHE A . A 1 178 ALA 178 178 ALA ALA A . A 1 179 GLY 179 179 GLY GLY A . A 1 180 VAL 180 180 VAL VAL A . A 1 181 GLY 181 181 GLY GLY A . A 1 182 GLU 182 182 GLU GLU A . A 1 183 ARG 183 183 ARG ARG A . A 1 184 THR 184 184 THR THR A . A 1 185 ARG 185 185 ARG ARG A . A 1 186 GLU 186 186 GLU GLU A . A 1 187 GLY 187 187 GLY GLY A . A 1 188 ASN 188 188 ASN ASN A . A 1 189 ASP 189 189 ASP ASP A . A 1 190 PHE 190 190 PHE PHE A . A 1 191 TYR 191 191 TYR TYR A . A 1 192 HIS 192 192 HIS HIS A . A 1 193 GLU 193 193 GLU GLU A . A 1 194 MET 194 194 MET MET A . A 1 195 THR 195 195 THR THR A . A 1 196 ASP 196 196 ASP ASP A . A 1 197 SER 197 197 SER SER A . A 1 198 ASN 198 198 ASN ASN A . A 1 199 VAL 199 199 VAL VAL A . A 1 200 ILE 200 200 ILE ILE A . A 1 201 ASP 201 201 ASP ASP A . A 1 202 LYS 202 202 LYS LYS A . A 1 203 VAL 203 203 VAL VAL A . A 1 204 SER 204 204 SER SER A . A 1 205 LEU 205 205 LEU LEU A . A 1 206 VAL 206 206 VAL VAL A . A 1 207 TYR 207 207 TYR TYR A . A 1 208 GLY 208 208 GLY GLY A . A 1 209 GLN 209 209 GLN GLN A . A 1 210 MET 210 210 MET MET A . A 1 211 ASN 211 211 ASN ASN A . A 1 212 GLU 212 212 GLU GLU A . A 1 213 PRO 213 213 PRO PRO A . A 1 214 PRO 214 214 PRO PRO A . A 1 215 GLY 215 215 GLY GLY A . A 1 216 ASN 216 216 ASN ASN A . A 1 217 ARG 217 217 ARG ARG A . A 1 218 LEU 218 218 LEU LEU A . A 1 219 ARG 219 219 ARG ARG A . A 1 220 VAL 220 220 VAL VAL A . A 1 221 ALA 221 221 ALA ALA A . A 1 222 LEU 222 222 LEU LEU A . A 1 223 THR 223 223 THR THR A . A 1 224 GLY 224 224 GLY GLY A . A 1 225 LEU 225 225 LEU LEU A . A 1 226 THR 226 226 THR THR A . A 1 227 MET 227 227 MET MET A . A 1 228 ALA 228 228 ALA ALA A . A 1 229 GLU 229 229 GLU GLU A . A 1 230 LYS 230 230 LYS LYS A . A 1 231 PHE 231 231 PHE PHE A . A 1 232 ARG 232 232 ARG ARG A . A 1 233 ASP 233 233 ASP ASP A . A 1 234 GLU 234 234 GLU GLU A . A 1 235 GLY 235 235 GLY GLY A . A 1 236 ARG 236 236 ARG ARG A . A 1 237 ASP 237 237 ASP ASP A . A 1 238 VAL 238 238 VAL VAL A . A 1 239 LEU 239 239 LEU LEU A . A 1 240 LEU 240 240 LEU LEU A . A 1 241 PHE 241 241 PHE PHE A . A 1 242 VAL 242 242 VAL VAL A . A 1 243 ASP 243 243 ASP ASP A . A 1 244 ASN 244 244 ASN ASN A . A 1 245 ILE 245 245 ILE ILE A . A 1 246 TYR 246 246 TYR TYR A . A 1 247 ARG 247 247 ARG ARG A . A 1 248 TYR 248 248 TYR TYR A . A 1 249 THR 249 249 THR THR A . A 1 250 LEU 250 250 LEU LEU A . A 1 251 ALA 251 251 ALA ALA A . A 1 252 GLY 252 252 GLY GLY A . A 1 253 THR 253 253 THR THR A . A 1 254 GLU 254 254 GLU GLU A . A 1 255 VAL 255 255 VAL VAL A . A 1 256 SER 256 256 SER SER A . A 1 257 ALA 257 257 ALA ALA A . A 1 258 LEU 258 258 LEU LEU A . A 1 259 LEU 259 259 LEU LEU A . A 1 260 GLY 260 260 GLY GLY A . A 1 261 ARG 261 261 ARG ARG A . A 1 262 MET 262 262 MET MET A . A 1 263 PRO 263 263 PRO PRO A . A 1 264 SER 264 264 SER SER A . A 1 265 ALA 265 265 ALA ALA A . A 1 266 VAL 266 266 VAL VAL A . A 1 267 GLY 267 267 GLY GLY A . A 1 268 TYR 268 268 TYR TYR A . A 1 269 GLN 269 269 GLN GLN A . A 1 270 PRO 270 270 PRO PRO A . A 1 271 THR 271 271 THR THR A . A 1 272 LEU 272 272 LEU LEU A . A 1 273 ALA 273 273 ALA ALA A . A 1 274 GLU 274 274 GLU GLU A . A 1 275 GLU 275 275 GLU GLU A . A 1 276 MET 276 276 MET MET A . A 1 277 GLY 277 277 GLY GLY A . A 1 278 VAL 278 278 VAL VAL A . A 1 279 LEU 279 279 LEU LEU A . A 1 280 GLN 280 280 GLN GLN A . A 1 281 GLU 281 281 GLU GLU A . A 1 282 ARG 282 282 ARG ARG A . A 1 283 ILE 283 283 ILE ILE A . A 1 284 THR 284 284 THR THR A . A 1 285 SER 285 285 SER SER A . A 1 286 THR 286 286 THR THR A . A 1 287 LYS 287 287 LYS LYS A . A 1 288 THR 288 288 THR THR A . A 1 289 GLY 289 289 GLY GLY A . A 1 290 SER 290 290 SER SER A . A 1 291 ILE 291 291 ILE ILE A . A 1 292 THR 292 292 THR THR A . A 1 293 SER 293 293 SER SER A . A 1 294 VAL 294 294 VAL VAL A . A 1 295 GLN 295 295 GLN GLN A . A 1 296 ALA 296 296 ALA ALA A . A 1 297 VAL 297 297 VAL VAL A . A 1 298 TYR 298 298 TYR TYR A . A 1 299 VAL 299 299 VAL VAL A . A 1 300 PRO 300 300 PRO PRO A . A 1 301 ALA 301 301 ALA ALA A . A 1 302 ASP 302 302 ASP ASP A . A 1 303 ASP 303 303 ASP ASP A . A 1 304 LEU 304 304 LEU LEU A . A 1 305 THR 305 305 THR THR A . A 1 306 ASP 306 306 ASP ASP A . A 1 307 PRO 307 307 PRO PRO A . A 1 308 SER 308 308 SER SER A . A 1 309 PRO 309 309 PRO PRO A . A 1 310 ALA 310 310 ALA ALA A . A 1 311 THR 311 311 THR THR A . A 1 312 THR 312 312 THR THR A . A 1 313 PHE 313 313 PHE PHE A . A 1 314 ALA 314 314 ALA ALA A . A 1 315 HIS 315 315 HIS HIS A . A 1 316 LEU 316 316 LEU LEU A . A 1 317 ASP 317 317 ASP ASP A . A 1 318 ALA 318 318 ALA ALA A . A 1 319 THR 319 319 THR THR A . A 1 320 VAL 320 320 VAL VAL A . A 1 321 VAL 321 321 VAL VAL A . A 1 322 LEU 322 322 LEU LEU A . A 1 323 SER 323 323 SER SER A . A 1 324 ARG 324 324 ARG ARG A . A 1 325 GLN 325 325 GLN GLN A . A 1 326 ILE 326 326 ILE ILE A . A 1 327 ALA 327 327 ALA ALA A . A 1 328 SER 328 328 SER SER A . A 1 329 LEU 329 329 LEU LEU A . A 1 330 GLY 330 330 GLY GLY A . A 1 331 ILE 331 331 ILE ILE A . A 1 332 TYR 332 332 TYR TYR A . A 1 333 PRO 333 333 PRO PRO A . A 1 334 ALA 334 334 ALA ALA A . A 1 335 VAL 335 335 VAL VAL A . A 1 336 ASP 336 336 ASP ASP A . A 1 337 PRO 337 337 PRO PRO A . A 1 338 LEU 338 338 LEU LEU A . A 1 339 ASP 339 339 ASP ASP A . A 1 340 SER 340 340 SER SER A . A 1 341 THR 341 341 THR THR A . A 1 342 SER 342 342 SER SER A . A 1 343 ARG 343 343 ARG ARG A . A 1 344 GLN 344 344 GLN GLN A . A 1 345 LEU 345 345 LEU LEU A . A 1 346 ASP 346 346 ASP ASP A . A 1 347 PRO 347 347 PRO PRO A . A 1 348 LEU 348 348 LEU LEU A . A 1 349 VAL 349 349 VAL VAL A . A 1 350 VAL 350 350 VAL VAL A . A 1 351 GLY 351 351 GLY GLY A . A 1 352 GLN 352 352 GLN GLN A . A 1 353 GLU 353 353 GLU GLU A . A 1 354 HIS 354 354 HIS HIS A . A 1 355 TYR 355 355 TYR TYR A . A 1 356 ASP 356 356 ASP ASP A . A 1 357 THR 357 357 THR THR A . A 1 358 ALA 358 358 ALA ALA A . A 1 359 ARG 359 359 ARG ARG A . A 1 360 GLY 360 360 GLY GLY A . A 1 361 VAL 361 361 VAL VAL A . A 1 362 GLN 362 362 GLN GLN A . A 1 363 SER 363 363 SER SER A . A 1 364 ILE 364 364 ILE ILE A . A 1 365 LEU 365 365 LEU LEU A . A 1 366 GLN 366 366 GLN GLN A . A 1 367 ARG 367 367 ARG ARG A . A 1 368 TYR 368 368 TYR TYR A . A 1 369 GLN 369 369 GLN GLN A . A 1 370 GLU 370 370 GLU GLU A . A 1 371 LEU 371 371 LEU LEU A . A 1 372 LYS 372 372 LYS LYS A . A 1 373 ASP 373 373 ASP ASP A . A 1 374 ILE 374 374 ILE ILE A . A 1 375 ILE 375 375 ILE ILE A . A 1 376 ALA 376 376 ALA ALA A . A 1 377 ILE 377 377 ILE ILE A . A 1 378 LEU 378 378 LEU LEU A . A 1 379 GLY 379 379 GLY GLY A . A 1 380 MET 380 380 MET MET A . A 1 381 ASP 381 381 ASP ASP A . A 1 382 GLU 382 382 GLU GLU A . A 1 383 LEU 383 383 LEU LEU A . A 1 384 SER 384 384 SER SER A . A 1 385 GLU 385 385 GLU GLU A . A 1 386 GLU 386 386 GLU GLU A . A 1 387 ASP 387 387 ASP ASP A . A 1 388 LYS 388 388 LYS LYS A . A 1 389 LEU 389 389 LEU LEU A . A 1 390 VAL 390 390 VAL VAL A . A 1 391 VAL 391 391 VAL VAL A . A 1 392 ALA 392 392 ALA ALA A . A 1 393 ARG 393 393 ARG ARG A . A 1 394 ALA 394 394 ALA ALA A . A 1 395 ARG 395 395 ARG ARG A . A 1 396 LYS 396 396 LYS LYS A . A 1 397 ILE 397 397 ILE ILE A . A 1 398 GLN 398 398 GLN GLN A . A 1 399 ARG 399 399 ARG ARG A . A 1 400 PHE 400 400 PHE PHE A . A 1 401 LEU 401 401 LEU LEU A . A 1 402 SER 402 402 SER SER A . A 1 403 GLN 403 403 GLN GLN A . A 1 404 PRO 404 404 PRO PRO A . A 1 405 PHE 405 405 PHE PHE A . A 1 406 PHE 406 406 PHE PHE A . A 1 407 VAL 407 407 VAL VAL A . A 1 408 ALA 408 408 ALA ALA A . A 1 409 GLU 409 409 GLU GLU A . A 1 410 VAL 410 410 VAL VAL A . A 1 411 PHE 411 411 PHE PHE A . A 1 412 THR 412 412 THR THR A . A 1 413 GLY 413 413 GLY GLY A . A 1 414 SER 414 414 SER SER A . A 1 415 PRO 415 415 PRO PRO A . A 1 416 GLY 416 416 GLY GLY A . A 1 417 LYS 417 417 LYS LYS A . A 1 418 TYR 418 418 TYR TYR A . A 1 419 VAL 419 419 VAL VAL A . A 1 420 SER 420 420 SER SER A . A 1 421 LEU 421 421 LEU LEU A . A 1 422 LYS 422 422 LYS LYS A . A 1 423 ASP 423 423 ASP ASP A . A 1 424 THR 424 424 THR THR A . A 1 425 ILE 425 425 ILE ILE A . A 1 426 ARG 426 426 ARG ARG A . A 1 427 GLY 427 427 GLY GLY A . A 1 428 PHE 428 428 PHE PHE A . A 1 429 LYS 429 429 LYS LYS A . A 1 430 GLY 430 430 GLY GLY A . A 1 431 ILE 431 431 ILE ILE A . A 1 432 MET 432 432 MET MET A . A 1 433 GLU 433 433 GLU GLU A . A 1 434 GLY 434 434 GLY GLY A . A 1 435 GLU 435 435 GLU GLU A . A 1 436 TYR 436 436 TYR TYR A . A 1 437 ASP 437 437 ASP ASP A . A 1 438 HIS 438 438 HIS HIS A . A 1 439 LEU 439 439 LEU LEU A . A 1 440 PRO 440 440 PRO PRO A . A 1 441 GLU 441 441 GLU GLU A . A 1 442 GLN 442 442 GLN GLN A . A 1 443 ALA 443 443 ALA ALA A . A 1 444 PHE 444 444 PHE PHE A . A 1 445 TYR 445 445 TYR TYR A . A 1 446 MET 446 446 MET MET A . A 1 447 VAL 447 447 VAL VAL A . A 1 448 GLY 448 448 GLY GLY A . A 1 449 SER 449 449 SER SER A . A 1 450 ILE 450 450 ILE ILE A . A 1 451 GLU 451 451 GLU GLU A . A 1 452 GLU 452 452 GLU GLU A . A 1 453 ALA 453 453 ALA ALA A . A 1 454 VAL 454 454 VAL VAL A . A 1 455 GLU 455 455 GLU GLU A . A 1 456 LYS 456 456 LYS LYS A . A 1 457 ALA 457 457 ALA ALA A . A 1 458 LYS 458 458 LYS LYS A . A 1 459 LYS 459 459 LYS LYS A . A 1 460 LEU 460 460 LEU LEU A . # # loop_ # #