data_9A37 # _entry.id 9A37 # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Graziadei, A." 2 "Dau, T." 3 "Brock, O." 4 "Rappsilber, J." 5 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000192 PDBDEV_00000192 ? PDB 9A37 pdb_00009a37 10.2210/pdb9a37/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A37 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2023-02-03 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _ihm_entry_collection.id PDBDEV_G_1000001 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000001 _ihm_entry_collection_mapping.entry_id 9A37 # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nature Biotechnology" _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume . _citation.page_first . _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41587-023-01704-z _citation.pdbx_database_id_PubMed 36941363 _citation.title "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning" _citation.year 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Graziadei, A." 2 1 "Dau, T." 3 1 "Brock, O." 4 1 "Rappsilber, J." 5 # _entity.details . _entity.formula_weight 70733.766 _entity.id 1 _entity.pdbx_description P23843 _entity.pdbx_number_of_molecules 1 _entity.src_method NAT _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH _entity_poly.pdbx_seq_one_letter_code_can MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . THR 2 1 . ASN 3 1 . ILE 4 1 . THR 5 1 . LYS 6 1 . ARG 7 1 . SER 8 1 . LEU 9 1 . VAL 10 1 . ALA 11 1 . ALA 12 1 . GLY 13 1 . VAL 14 1 . LEU 15 1 . ALA 16 1 . ALA 17 1 . LEU 18 1 . MET 19 1 . ALA 20 1 . GLY 21 1 . ASN 22 1 . VAL 23 1 . ALA 24 1 . LEU 25 1 . ALA 26 1 . ALA 27 1 . ASP 28 1 . VAL 29 1 . PRO 30 1 . ALA 31 1 . GLY 32 1 . VAL 33 1 . THR 34 1 . LEU 35 1 . ALA 36 1 . GLU 37 1 . LYS 38 1 . GLN 39 1 . THR 40 1 . LEU 41 1 . VAL 42 1 . ARG 43 1 . ASN 44 1 . ASN 45 1 . GLY 46 1 . SER 47 1 . GLU 48 1 . VAL 49 1 . GLN 50 1 . SER 51 1 . LEU 52 1 . ASP 53 1 . PRO 54 1 . HIS 55 1 . LYS 56 1 . ILE 57 1 . GLU 58 1 . GLY 59 1 . VAL 60 1 . PRO 61 1 . GLU 62 1 . SER 63 1 . ASN 64 1 . ILE 65 1 . SER 66 1 . ARG 67 1 . ASP 68 1 . LEU 69 1 . PHE 70 1 . GLU 71 1 . GLY 72 1 . LEU 73 1 . LEU 74 1 . VAL 75 1 . SER 76 1 . ASP 77 1 . LEU 78 1 . ASP 79 1 . GLY 80 1 . HIS 81 1 . PRO 82 1 . ALA 83 1 . PRO 84 1 . GLY 85 1 . VAL 86 1 . ALA 87 1 . GLU 88 1 . SER 89 1 . TRP 90 1 . ASP 91 1 . ASN 92 1 . LYS 93 1 . ASP 94 1 . ALA 95 1 . LYS 96 1 . VAL 97 1 . TRP 98 1 . THR 99 1 . PHE 100 1 . HIS 101 1 . LEU 102 1 . ARG 103 1 . LYS 104 1 . ASP 105 1 . ALA 106 1 . LYS 107 1 . TRP 108 1 . SER 109 1 . ASP 110 1 . GLY 111 1 . THR 112 1 . PRO 113 1 . VAL 114 1 . THR 115 1 . ALA 116 1 . GLN 117 1 . ASP 118 1 . PHE 119 1 . VAL 120 1 . TYR 121 1 . SER 122 1 . TRP 123 1 . GLN 124 1 . ARG 125 1 . SER 126 1 . VAL 127 1 . ASP 128 1 . PRO 129 1 . ASN 130 1 . THR 131 1 . ALA 132 1 . SER 133 1 . PRO 134 1 . TYR 135 1 . ALA 136 1 . SER 137 1 . TYR 138 1 . LEU 139 1 . GLN 140 1 . TYR 141 1 . GLY 142 1 . HIS 143 1 . ILE 144 1 . ALA 145 1 . GLY 146 1 . ILE 147 1 . ASP 148 1 . GLU 149 1 . ILE 150 1 . LEU 151 1 . GLU 152 1 . GLY 153 1 . LYS 154 1 . LYS 155 1 . PRO 156 1 . ILE 157 1 . THR 158 1 . ASP 159 1 . LEU 160 1 . GLY 161 1 . VAL 162 1 . LYS 163 1 . ALA 164 1 . ILE 165 1 . ASP 166 1 . ASP 167 1 . HIS 168 1 . THR 169 1 . LEU 170 1 . GLU 171 1 . VAL 172 1 . THR 173 1 . LEU 174 1 . SER 175 1 . GLU 176 1 . PRO 177 1 . VAL 178 1 . PRO 179 1 . TYR 180 1 . PHE 181 1 . TYR 182 1 . LYS 183 1 . LEU 184 1 . LEU 185 1 . VAL 186 1 . HIS 187 1 . PRO 188 1 . SER 189 1 . THR 190 1 . SER 191 1 . PRO 192 1 . VAL 193 1 . PRO 194 1 . LYS 195 1 . ALA 196 1 . ALA 197 1 . ILE 198 1 . GLU 199 1 . LYS 200 1 . PHE 201 1 . GLY 202 1 . GLU 203 1 . LYS 204 1 . TRP 205 1 . THR 206 1 . GLN 207 1 . PRO 208 1 . GLY 209 1 . ASN 210 1 . ILE 211 1 . VAL 212 1 . THR 213 1 . ASN 214 1 . GLY 215 1 . ALA 216 1 . TYR 217 1 . THR 218 1 . LEU 219 1 . LYS 220 1 . ASP 221 1 . TRP 222 1 . VAL 223 1 . VAL 224 1 . ASN 225 1 . GLU 226 1 . ARG 227 1 . ILE 228 1 . VAL 229 1 . LEU 230 1 . GLU 231 1 . ARG 232 1 . SER 233 1 . PRO 234 1 . THR 235 1 . TYR 236 1 . TRP 237 1 . ASN 238 1 . ASN 239 1 . ALA 240 1 . LYS 241 1 . THR 242 1 . VAL 243 1 . ILE 244 1 . ASN 245 1 . GLN 246 1 . VAL 247 1 . THR 248 1 . TYR 249 1 . LEU 250 1 . PRO 251 1 . ILE 252 1 . ALA 253 1 . SER 254 1 . GLU 255 1 . VAL 256 1 . THR 257 1 . ASP 258 1 . VAL 259 1 . ASN 260 1 . ARG 261 1 . TYR 262 1 . ARG 263 1 . SER 264 1 . GLY 265 1 . GLU 266 1 . ILE 267 1 . ASP 268 1 . MET 269 1 . THR 270 1 . ASN 271 1 . ASN 272 1 . SER 273 1 . MET 274 1 . PRO 275 1 . ILE 276 1 . GLU 277 1 . LEU 278 1 . PHE 279 1 . GLN 280 1 . LYS 281 1 . LEU 282 1 . LYS 283 1 . LYS 284 1 . GLU 285 1 . ILE 286 1 . PRO 287 1 . ASP 288 1 . GLU 289 1 . VAL 290 1 . HIS 291 1 . VAL 292 1 . ASP 293 1 . PRO 294 1 . TYR 295 1 . LEU 296 1 . CYS 297 1 . THR 298 1 . TYR 299 1 . TYR 300 1 . TYR 301 1 . GLU 302 1 . ILE 303 1 . ASN 304 1 . ASN 305 1 . GLN 306 1 . LYS 307 1 . PRO 308 1 . PRO 309 1 . PHE 310 1 . ASN 311 1 . ASP 312 1 . VAL 313 1 . ARG 314 1 . VAL 315 1 . ARG 316 1 . THR 317 1 . ALA 318 1 . LEU 319 1 . LYS 320 1 . LEU 321 1 . GLY 322 1 . MET 323 1 . ASP 324 1 . ARG 325 1 . ASP 326 1 . ILE 327 1 . ILE 328 1 . VAL 329 1 . ASN 330 1 . LYS 331 1 . VAL 332 1 . LYS 333 1 . ALA 334 1 . GLN 335 1 . GLY 336 1 . ASN 337 1 . MET 338 1 . PRO 339 1 . ALA 340 1 . TYR 341 1 . GLY 342 1 . TYR 343 1 . THR 344 1 . PRO 345 1 . PRO 346 1 . TYR 347 1 . THR 348 1 . ASP 349 1 . GLY 350 1 . ALA 351 1 . LYS 352 1 . LEU 353 1 . THR 354 1 . GLN 355 1 . PRO 356 1 . GLU 357 1 . TRP 358 1 . PHE 359 1 . GLY 360 1 . TRP 361 1 . SER 362 1 . GLN 363 1 . GLU 364 1 . LYS 365 1 . ARG 366 1 . ASN 367 1 . GLU 368 1 . GLU 369 1 . ALA 370 1 . LYS 371 1 . LYS 372 1 . LEU 373 1 . LEU 374 1 . ALA 375 1 . GLU 376 1 . ALA 377 1 . GLY 378 1 . TYR 379 1 . THR 380 1 . ALA 381 1 . ASP 382 1 . LYS 383 1 . PRO 384 1 . LEU 385 1 . THR 386 1 . ILE 387 1 . ASN 388 1 . LEU 389 1 . LEU 390 1 . TYR 391 1 . ASN 392 1 . THR 393 1 . SER 394 1 . ASP 395 1 . LEU 396 1 . HIS 397 1 . LYS 398 1 . LYS 399 1 . LEU 400 1 . ALA 401 1 . ILE 402 1 . ALA 403 1 . ALA 404 1 . SER 405 1 . SER 406 1 . LEU 407 1 . TRP 408 1 . LYS 409 1 . LYS 410 1 . ASN 411 1 . ILE 412 1 . GLY 413 1 . VAL 414 1 . ASN 415 1 . VAL 416 1 . LYS 417 1 . LEU 418 1 . VAL 419 1 . ASN 420 1 . GLN 421 1 . GLU 422 1 . TRP 423 1 . LYS 424 1 . THR 425 1 . PHE 426 1 . LEU 427 1 . ASP 428 1 . THR 429 1 . ARG 430 1 . HIS 431 1 . GLN 432 1 . GLY 433 1 . THR 434 1 . PHE 435 1 . ASP 436 1 . VAL 437 1 . ALA 438 1 . ARG 439 1 . ALA 440 1 . GLY 441 1 . TRP 442 1 . CYS 443 1 . ALA 444 1 . ASP 445 1 . TYR 446 1 . ASN 447 1 . GLU 448 1 . PRO 449 1 . THR 450 1 . SER 451 1 . PHE 452 1 . LEU 453 1 . ASN 454 1 . THR 455 1 . MET 456 1 . LEU 457 1 . SER 458 1 . ASN 459 1 . SER 460 1 . SER 461 1 . MET 462 1 . ASN 463 1 . THR 464 1 . ALA 465 1 . HIS 466 1 . TYR 467 1 . LYS 468 1 . SER 469 1 . PRO 470 1 . ALA 471 1 . PHE 472 1 . ASP 473 1 . SER 474 1 . ILE 475 1 . MET 476 1 . ALA 477 1 . GLU 478 1 . THR 479 1 . LEU 480 1 . LYS 481 1 . VAL 482 1 . THR 483 1 . ASP 484 1 . GLU 485 1 . ALA 486 1 . GLN 487 1 . ARG 488 1 . THR 489 1 . ALA 490 1 . LEU 491 1 . TYR 492 1 . THR 493 1 . LYS 494 1 . ALA 495 1 . GLU 496 1 . GLN 497 1 . GLN 498 1 . LEU 499 1 . ASP 500 1 . LYS 501 1 . ASP 502 1 . SER 503 1 . ALA 504 1 . ILE 505 1 . VAL 506 1 . PRO 507 1 . VAL 508 1 . TYR 509 1 . TYR 510 1 . TYR 511 1 . VAL 512 1 . ASN 513 1 . ALA 514 1 . ARG 515 1 . LEU 516 1 . VAL 517 1 . LYS 518 1 . PRO 519 1 . TRP 520 1 . VAL 521 1 . GLY 522 1 . GLY 523 1 . TYR 524 1 . THR 525 1 . GLY 526 1 . LYS 527 1 . ASP 528 1 . PRO 529 1 . LEU 530 1 . ASP 531 1 . ASN 532 1 . THR 533 1 . TYR 534 1 . THR 535 1 . ARG 536 1 . ASN 537 1 . MET 538 1 . TYR 539 1 . ILE 540 1 . VAL 541 1 . LYS 542 1 . HIS 543 # _ihm_chemical_component_descriptor.auth_name L-Photo-Leucine _ihm_chemical_component_descriptor.chemical_name . _ihm_chemical_component_descriptor.common_name L-Photo-Leucine _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C5H9N3O2/c1-5(7-8-5)2-3(6)4(9)10/h3H,2,6H2,1H3,(H,9,10)/t3-/m0/s1 _ihm_chemical_component_descriptor.inchi_key MJRDGTVDJKACQZ-VKHMYHEASA-N _ihm_chemical_component_descriptor.smiles CC1(C[C@H](N)C(O)=O)N=N1 _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 GLU LEU 1 . P23843 P23843 1 1 1 1 1 L-Photo-Leucine 255 516 LEU GLU 1 . P23843 P23843 1 1 2 2 1 L-Photo-Leucine 353 496 LEU LEU 1 . P23843 P23843 1 1 3 3 1 L-Photo-Leucine 174 480 ASP LEU 1 . P23843 P23843 1 1 4 4 1 L-Photo-Leucine 326 407 GLU LEU 1 . P23843 P23843 1 1 5 5 1 L-Photo-Leucine 478 491 LEU ALA 1 . P23843 P23843 1 1 6 6 1 L-Photo-Leucine 353 504 LEU ILE 1 . P23843 P23843 1 1 7 7 1 L-Photo-Leucine 174 475 THR LEU 1 . P23843 P23843 1 1 8 8 1 L-Photo-Leucine 479 491 ILE LEU 1 . P23843 P23843 1 1 9 9 1 L-Photo-Leucine 244 516 ALA LEU 1 . P23843 P23843 1 1 10 10 1 L-Photo-Leucine 216 400 ASP LEU 1 . P23843 P23843 1 1 11 11 1 L-Photo-Leucine 258 516 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . GLU LEU . 10 1 1 1 1 by-residue NO 0.05 "upper bound" 255 516 . . A A . . LEU GLU . 10 1 1 2 2 by-residue NO 0.05 "upper bound" 353 496 . . A A . . LEU LEU . 10 1 1 3 3 by-residue NO 0.05 "upper bound" 174 480 . . A A . . ASP LEU . 10 1 1 4 4 by-residue NO 0.05 "upper bound" 326 407 . . A A . . GLU LEU . 10 1 1 5 5 by-residue NO 0.05 "upper bound" 478 491 . . A A . . LEU ALA . 10 1 1 6 6 by-residue NO 0.05 "upper bound" 353 504 . . A A . . LEU ILE . 10 1 1 7 7 by-residue NO 0.05 "upper bound" 174 475 . . A A . . THR LEU . 10 1 1 8 8 by-residue NO 0.05 "upper bound" 479 491 . . A A . . ILE LEU . 10 1 1 9 9 by-residue NO 0.05 "upper bound" 244 516 . . A A . . ALA LEU . 10 1 1 10 10 by-residue NO 0.05 "upper bound" 216 400 . . A A . . ASP LEU . 10 1 1 11 11 by-residue NO 0.05 "upper bound" 258 516 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code JPST001851 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name jPOSTrepo _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # _ihm_entity_poly_segment.comp_id_begin MET _ihm_entity_poly_segment.comp_id_end HIS _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 543 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 1 5 1 6 1 7 1 8 1 9 1 10 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 1 5 . 1 1 1 6 . 1 1 1 7 . 1 1 1 8 . 1 1 1 9 . 1 1 1 10 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description P23843 _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag YES _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 10 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id . _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method "AlphaLink with 10 msa subsamples" _ihm_modeling_protocol_details.step_name AlphaLink _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative modeling using in-cell photo-crosslinking mass spectrometry and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "Integrative model" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description P23843 _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # _software.citation_id 1 _software.classification "model building" _software.description "protein structure prediction by deep learning assisted by experimental distance restraints" _software.location https://github.com/lhatsk/AlphaLink _software.name AlphaLink _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A37 _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.title "Model of E. coli OppA by in-cell photo-crosslinking MS and deep learning" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details P23843 _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code OPPA_ECOLI _struct_ref.db_name UNP _struct_ref.details "Periplasmic oligopeptide-binding protein OS=Escherichia coli (strain K12) OX=83333 GN=oppA PE=1 SV=2" _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P23843 _struct_ref.pdbx_seq_one_letter_code MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.db_align_end 543 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 543 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 THR 2 2 THR THR A . A 1 3 ASN 3 3 ASN ASN A . A 1 4 ILE 4 4 ILE ILE A . A 1 5 THR 5 5 THR THR A . A 1 6 LYS 6 6 LYS LYS A . A 1 7 ARG 7 7 ARG ARG A . A 1 8 SER 8 8 SER SER A . A 1 9 LEU 9 9 LEU LEU A . A 1 10 VAL 10 10 VAL VAL A . A 1 11 ALA 11 11 ALA ALA A . A 1 12 ALA 12 12 ALA ALA A . A 1 13 GLY 13 13 GLY GLY A . A 1 14 VAL 14 14 VAL VAL A . A 1 15 LEU 15 15 LEU LEU A . A 1 16 ALA 16 16 ALA ALA A . A 1 17 ALA 17 17 ALA ALA A . A 1 18 LEU 18 18 LEU LEU A . A 1 19 MET 19 19 MET MET A . A 1 20 ALA 20 20 ALA ALA A . A 1 21 GLY 21 21 GLY GLY A . A 1 22 ASN 22 22 ASN ASN A . A 1 23 VAL 23 23 VAL VAL A . A 1 24 ALA 24 24 ALA ALA A . A 1 25 LEU 25 25 LEU LEU A . A 1 26 ALA 26 26 ALA ALA A . A 1 27 ALA 27 27 ALA ALA A . A 1 28 ASP 28 28 ASP ASP A . A 1 29 VAL 29 29 VAL VAL A . A 1 30 PRO 30 30 PRO PRO A . A 1 31 ALA 31 31 ALA ALA A . A 1 32 GLY 32 32 GLY GLY A . A 1 33 VAL 33 33 VAL VAL A . A 1 34 THR 34 34 THR THR A . A 1 35 LEU 35 35 LEU LEU A . A 1 36 ALA 36 36 ALA ALA A . A 1 37 GLU 37 37 GLU GLU A . A 1 38 LYS 38 38 LYS LYS A . A 1 39 GLN 39 39 GLN GLN A . A 1 40 THR 40 40 THR THR A . A 1 41 LEU 41 41 LEU LEU A . A 1 42 VAL 42 42 VAL VAL A . A 1 43 ARG 43 43 ARG ARG A . A 1 44 ASN 44 44 ASN ASN A . A 1 45 ASN 45 45 ASN ASN A . A 1 46 GLY 46 46 GLY GLY A . A 1 47 SER 47 47 SER SER A . A 1 48 GLU 48 48 GLU GLU A . A 1 49 VAL 49 49 VAL VAL A . A 1 50 GLN 50 50 GLN GLN A . A 1 51 SER 51 51 SER SER A . A 1 52 LEU 52 52 LEU LEU A . A 1 53 ASP 53 53 ASP ASP A . A 1 54 PRO 54 54 PRO PRO A . A 1 55 HIS 55 55 HIS HIS A . A 1 56 LYS 56 56 LYS LYS A . A 1 57 ILE 57 57 ILE ILE A . A 1 58 GLU 58 58 GLU GLU A . A 1 59 GLY 59 59 GLY GLY A . A 1 60 VAL 60 60 VAL VAL A . A 1 61 PRO 61 61 PRO PRO A . A 1 62 GLU 62 62 GLU GLU A . A 1 63 SER 63 63 SER SER A . A 1 64 ASN 64 64 ASN ASN A . A 1 65 ILE 65 65 ILE ILE A . A 1 66 SER 66 66 SER SER A . A 1 67 ARG 67 67 ARG ARG A . A 1 68 ASP 68 68 ASP ASP A . A 1 69 LEU 69 69 LEU LEU A . A 1 70 PHE 70 70 PHE PHE A . A 1 71 GLU 71 71 GLU GLU A . A 1 72 GLY 72 72 GLY GLY A . A 1 73 LEU 73 73 LEU LEU A . A 1 74 LEU 74 74 LEU LEU A . A 1 75 VAL 75 75 VAL VAL A . A 1 76 SER 76 76 SER SER A . A 1 77 ASP 77 77 ASP ASP A . A 1 78 LEU 78 78 LEU LEU A . A 1 79 ASP 79 79 ASP ASP A . A 1 80 GLY 80 80 GLY GLY A . A 1 81 HIS 81 81 HIS HIS A . A 1 82 PRO 82 82 PRO PRO A . A 1 83 ALA 83 83 ALA ALA A . A 1 84 PRO 84 84 PRO PRO A . A 1 85 GLY 85 85 GLY GLY A . A 1 86 VAL 86 86 VAL VAL A . A 1 87 ALA 87 87 ALA ALA A . A 1 88 GLU 88 88 GLU GLU A . A 1 89 SER 89 89 SER SER A . A 1 90 TRP 90 90 TRP TRP A . A 1 91 ASP 91 91 ASP ASP A . A 1 92 ASN 92 92 ASN ASN A . A 1 93 LYS 93 93 LYS LYS A . A 1 94 ASP 94 94 ASP ASP A . A 1 95 ALA 95 95 ALA ALA A . A 1 96 LYS 96 96 LYS LYS A . A 1 97 VAL 97 97 VAL VAL A . A 1 98 TRP 98 98 TRP TRP A . A 1 99 THR 99 99 THR THR A . A 1 100 PHE 100 100 PHE PHE A . A 1 101 HIS 101 101 HIS HIS A . A 1 102 LEU 102 102 LEU LEU A . A 1 103 ARG 103 103 ARG ARG A . A 1 104 LYS 104 104 LYS LYS A . A 1 105 ASP 105 105 ASP ASP A . A 1 106 ALA 106 106 ALA ALA A . A 1 107 LYS 107 107 LYS LYS A . A 1 108 TRP 108 108 TRP TRP A . A 1 109 SER 109 109 SER SER A . A 1 110 ASP 110 110 ASP ASP A . A 1 111 GLY 111 111 GLY GLY A . A 1 112 THR 112 112 THR THR A . A 1 113 PRO 113 113 PRO PRO A . A 1 114 VAL 114 114 VAL VAL A . A 1 115 THR 115 115 THR THR A . A 1 116 ALA 116 116 ALA ALA A . A 1 117 GLN 117 117 GLN GLN A . A 1 118 ASP 118 118 ASP ASP A . A 1 119 PHE 119 119 PHE PHE A . A 1 120 VAL 120 120 VAL VAL A . A 1 121 TYR 121 121 TYR TYR A . A 1 122 SER 122 122 SER SER A . A 1 123 TRP 123 123 TRP TRP A . A 1 124 GLN 124 124 GLN GLN A . A 1 125 ARG 125 125 ARG ARG A . A 1 126 SER 126 126 SER SER A . A 1 127 VAL 127 127 VAL VAL A . A 1 128 ASP 128 128 ASP ASP A . A 1 129 PRO 129 129 PRO PRO A . A 1 130 ASN 130 130 ASN ASN A . A 1 131 THR 131 131 THR THR A . A 1 132 ALA 132 132 ALA ALA A . A 1 133 SER 133 133 SER SER A . A 1 134 PRO 134 134 PRO PRO A . A 1 135 TYR 135 135 TYR TYR A . A 1 136 ALA 136 136 ALA ALA A . A 1 137 SER 137 137 SER SER A . A 1 138 TYR 138 138 TYR TYR A . A 1 139 LEU 139 139 LEU LEU A . A 1 140 GLN 140 140 GLN GLN A . A 1 141 TYR 141 141 TYR TYR A . A 1 142 GLY 142 142 GLY GLY A . A 1 143 HIS 143 143 HIS HIS A . A 1 144 ILE 144 144 ILE ILE A . A 1 145 ALA 145 145 ALA ALA A . A 1 146 GLY 146 146 GLY GLY A . A 1 147 ILE 147 147 ILE ILE A . A 1 148 ASP 148 148 ASP ASP A . A 1 149 GLU 149 149 GLU GLU A . A 1 150 ILE 150 150 ILE ILE A . A 1 151 LEU 151 151 LEU LEU A . A 1 152 GLU 152 152 GLU GLU A . A 1 153 GLY 153 153 GLY GLY A . A 1 154 LYS 154 154 LYS LYS A . A 1 155 LYS 155 155 LYS LYS A . A 1 156 PRO 156 156 PRO PRO A . A 1 157 ILE 157 157 ILE ILE A . A 1 158 THR 158 158 THR THR A . A 1 159 ASP 159 159 ASP ASP A . A 1 160 LEU 160 160 LEU LEU A . A 1 161 GLY 161 161 GLY GLY A . A 1 162 VAL 162 162 VAL VAL A . A 1 163 LYS 163 163 LYS LYS A . A 1 164 ALA 164 164 ALA ALA A . A 1 165 ILE 165 165 ILE ILE A . A 1 166 ASP 166 166 ASP ASP A . A 1 167 ASP 167 167 ASP ASP A . A 1 168 HIS 168 168 HIS HIS A . A 1 169 THR 169 169 THR THR A . A 1 170 LEU 170 170 LEU LEU A . A 1 171 GLU 171 171 GLU GLU A . A 1 172 VAL 172 172 VAL VAL A . A 1 173 THR 173 173 THR THR A . A 1 174 LEU 174 174 LEU LEU A . A 1 175 SER 175 175 SER SER A . A 1 176 GLU 176 176 GLU GLU A . A 1 177 PRO 177 177 PRO PRO A . A 1 178 VAL 178 178 VAL VAL A . A 1 179 PRO 179 179 PRO PRO A . A 1 180 TYR 180 180 TYR TYR A . A 1 181 PHE 181 181 PHE PHE A . A 1 182 TYR 182 182 TYR TYR A . A 1 183 LYS 183 183 LYS LYS A . A 1 184 LEU 184 184 LEU LEU A . A 1 185 LEU 185 185 LEU LEU A . A 1 186 VAL 186 186 VAL VAL A . A 1 187 HIS 187 187 HIS HIS A . A 1 188 PRO 188 188 PRO PRO A . A 1 189 SER 189 189 SER SER A . A 1 190 THR 190 190 THR THR A . A 1 191 SER 191 191 SER SER A . A 1 192 PRO 192 192 PRO PRO A . A 1 193 VAL 193 193 VAL VAL A . A 1 194 PRO 194 194 PRO PRO A . A 1 195 LYS 195 195 LYS LYS A . A 1 196 ALA 196 196 ALA ALA A . A 1 197 ALA 197 197 ALA ALA A . A 1 198 ILE 198 198 ILE ILE A . A 1 199 GLU 199 199 GLU GLU A . A 1 200 LYS 200 200 LYS LYS A . A 1 201 PHE 201 201 PHE PHE A . A 1 202 GLY 202 202 GLY GLY A . A 1 203 GLU 203 203 GLU GLU A . A 1 204 LYS 204 204 LYS LYS A . A 1 205 TRP 205 205 TRP TRP A . A 1 206 THR 206 206 THR THR A . A 1 207 GLN 207 207 GLN GLN A . A 1 208 PRO 208 208 PRO PRO A . A 1 209 GLY 209 209 GLY GLY A . A 1 210 ASN 210 210 ASN ASN A . A 1 211 ILE 211 211 ILE ILE A . A 1 212 VAL 212 212 VAL VAL A . A 1 213 THR 213 213 THR THR A . A 1 214 ASN 214 214 ASN ASN A . A 1 215 GLY 215 215 GLY GLY A . A 1 216 ALA 216 216 ALA ALA A . A 1 217 TYR 217 217 TYR TYR A . A 1 218 THR 218 218 THR THR A . A 1 219 LEU 219 219 LEU LEU A . A 1 220 LYS 220 220 LYS LYS A . A 1 221 ASP 221 221 ASP ASP A . A 1 222 TRP 222 222 TRP TRP A . A 1 223 VAL 223 223 VAL VAL A . A 1 224 VAL 224 224 VAL VAL A . A 1 225 ASN 225 225 ASN ASN A . A 1 226 GLU 226 226 GLU GLU A . A 1 227 ARG 227 227 ARG ARG A . A 1 228 ILE 228 228 ILE ILE A . A 1 229 VAL 229 229 VAL VAL A . A 1 230 LEU 230 230 LEU LEU A . A 1 231 GLU 231 231 GLU GLU A . A 1 232 ARG 232 232 ARG ARG A . A 1 233 SER 233 233 SER SER A . A 1 234 PRO 234 234 PRO PRO A . A 1 235 THR 235 235 THR THR A . A 1 236 TYR 236 236 TYR TYR A . A 1 237 TRP 237 237 TRP TRP A . A 1 238 ASN 238 238 ASN ASN A . A 1 239 ASN 239 239 ASN ASN A . A 1 240 ALA 240 240 ALA ALA A . A 1 241 LYS 241 241 LYS LYS A . A 1 242 THR 242 242 THR THR A . A 1 243 VAL 243 243 VAL VAL A . A 1 244 ILE 244 244 ILE ILE A . A 1 245 ASN 245 245 ASN ASN A . A 1 246 GLN 246 246 GLN GLN A . A 1 247 VAL 247 247 VAL VAL A . A 1 248 THR 248 248 THR THR A . A 1 249 TYR 249 249 TYR TYR A . A 1 250 LEU 250 250 LEU LEU A . A 1 251 PRO 251 251 PRO PRO A . A 1 252 ILE 252 252 ILE ILE A . A 1 253 ALA 253 253 ALA ALA A . A 1 254 SER 254 254 SER SER A . A 1 255 GLU 255 255 GLU GLU A . A 1 256 VAL 256 256 VAL VAL A . A 1 257 THR 257 257 THR THR A . A 1 258 ASP 258 258 ASP ASP A . A 1 259 VAL 259 259 VAL VAL A . A 1 260 ASN 260 260 ASN ASN A . A 1 261 ARG 261 261 ARG ARG A . A 1 262 TYR 262 262 TYR TYR A . A 1 263 ARG 263 263 ARG ARG A . A 1 264 SER 264 264 SER SER A . A 1 265 GLY 265 265 GLY GLY A . A 1 266 GLU 266 266 GLU GLU A . A 1 267 ILE 267 267 ILE ILE A . A 1 268 ASP 268 268 ASP ASP A . A 1 269 MET 269 269 MET MET A . A 1 270 THR 270 270 THR THR A . A 1 271 ASN 271 271 ASN ASN A . A 1 272 ASN 272 272 ASN ASN A . A 1 273 SER 273 273 SER SER A . A 1 274 MET 274 274 MET MET A . A 1 275 PRO 275 275 PRO PRO A . A 1 276 ILE 276 276 ILE ILE A . A 1 277 GLU 277 277 GLU GLU A . A 1 278 LEU 278 278 LEU LEU A . A 1 279 PHE 279 279 PHE PHE A . A 1 280 GLN 280 280 GLN GLN A . A 1 281 LYS 281 281 LYS LYS A . A 1 282 LEU 282 282 LEU LEU A . A 1 283 LYS 283 283 LYS LYS A . A 1 284 LYS 284 284 LYS LYS A . A 1 285 GLU 285 285 GLU GLU A . A 1 286 ILE 286 286 ILE ILE A . A 1 287 PRO 287 287 PRO PRO A . A 1 288 ASP 288 288 ASP ASP A . A 1 289 GLU 289 289 GLU GLU A . A 1 290 VAL 290 290 VAL VAL A . A 1 291 HIS 291 291 HIS HIS A . A 1 292 VAL 292 292 VAL VAL A . A 1 293 ASP 293 293 ASP ASP A . A 1 294 PRO 294 294 PRO PRO A . A 1 295 TYR 295 295 TYR TYR A . A 1 296 LEU 296 296 LEU LEU A . A 1 297 CYS 297 297 CYS CYS A . A 1 298 THR 298 298 THR THR A . A 1 299 TYR 299 299 TYR TYR A . A 1 300 TYR 300 300 TYR TYR A . A 1 301 TYR 301 301 TYR TYR A . A 1 302 GLU 302 302 GLU GLU A . A 1 303 ILE 303 303 ILE ILE A . A 1 304 ASN 304 304 ASN ASN A . A 1 305 ASN 305 305 ASN ASN A . A 1 306 GLN 306 306 GLN GLN A . A 1 307 LYS 307 307 LYS LYS A . A 1 308 PRO 308 308 PRO PRO A . A 1 309 PRO 309 309 PRO PRO A . A 1 310 PHE 310 310 PHE PHE A . A 1 311 ASN 311 311 ASN ASN A . A 1 312 ASP 312 312 ASP ASP A . A 1 313 VAL 313 313 VAL VAL A . A 1 314 ARG 314 314 ARG ARG A . A 1 315 VAL 315 315 VAL VAL A . A 1 316 ARG 316 316 ARG ARG A . A 1 317 THR 317 317 THR THR A . A 1 318 ALA 318 318 ALA ALA A . A 1 319 LEU 319 319 LEU LEU A . A 1 320 LYS 320 320 LYS LYS A . A 1 321 LEU 321 321 LEU LEU A . A 1 322 GLY 322 322 GLY GLY A . A 1 323 MET 323 323 MET MET A . A 1 324 ASP 324 324 ASP ASP A . A 1 325 ARG 325 325 ARG ARG A . A 1 326 ASP 326 326 ASP ASP A . A 1 327 ILE 327 327 ILE ILE A . A 1 328 ILE 328 328 ILE ILE A . A 1 329 VAL 329 329 VAL VAL A . A 1 330 ASN 330 330 ASN ASN A . A 1 331 LYS 331 331 LYS LYS A . A 1 332 VAL 332 332 VAL VAL A . A 1 333 LYS 333 333 LYS LYS A . A 1 334 ALA 334 334 ALA ALA A . A 1 335 GLN 335 335 GLN GLN A . A 1 336 GLY 336 336 GLY GLY A . A 1 337 ASN 337 337 ASN ASN A . A 1 338 MET 338 338 MET MET A . A 1 339 PRO 339 339 PRO PRO A . A 1 340 ALA 340 340 ALA ALA A . A 1 341 TYR 341 341 TYR TYR A . A 1 342 GLY 342 342 GLY GLY A . A 1 343 TYR 343 343 TYR TYR A . A 1 344 THR 344 344 THR THR A . A 1 345 PRO 345 345 PRO PRO A . A 1 346 PRO 346 346 PRO PRO A . A 1 347 TYR 347 347 TYR TYR A . A 1 348 THR 348 348 THR THR A . A 1 349 ASP 349 349 ASP ASP A . A 1 350 GLY 350 350 GLY GLY A . A 1 351 ALA 351 351 ALA ALA A . A 1 352 LYS 352 352 LYS LYS A . A 1 353 LEU 353 353 LEU LEU A . A 1 354 THR 354 354 THR THR A . A 1 355 GLN 355 355 GLN GLN A . A 1 356 PRO 356 356 PRO PRO A . A 1 357 GLU 357 357 GLU GLU A . A 1 358 TRP 358 358 TRP TRP A . A 1 359 PHE 359 359 PHE PHE A . A 1 360 GLY 360 360 GLY GLY A . A 1 361 TRP 361 361 TRP TRP A . A 1 362 SER 362 362 SER SER A . A 1 363 GLN 363 363 GLN GLN A . A 1 364 GLU 364 364 GLU GLU A . A 1 365 LYS 365 365 LYS LYS A . A 1 366 ARG 366 366 ARG ARG A . A 1 367 ASN 367 367 ASN ASN A . A 1 368 GLU 368 368 GLU GLU A . A 1 369 GLU 369 369 GLU GLU A . A 1 370 ALA 370 370 ALA ALA A . A 1 371 LYS 371 371 LYS LYS A . A 1 372 LYS 372 372 LYS LYS A . A 1 373 LEU 373 373 LEU LEU A . A 1 374 LEU 374 374 LEU LEU A . A 1 375 ALA 375 375 ALA ALA A . A 1 376 GLU 376 376 GLU GLU A . A 1 377 ALA 377 377 ALA ALA A . A 1 378 GLY 378 378 GLY GLY A . A 1 379 TYR 379 379 TYR TYR A . A 1 380 THR 380 380 THR THR A . A 1 381 ALA 381 381 ALA ALA A . A 1 382 ASP 382 382 ASP ASP A . A 1 383 LYS 383 383 LYS LYS A . A 1 384 PRO 384 384 PRO PRO A . A 1 385 LEU 385 385 LEU LEU A . A 1 386 THR 386 386 THR THR A . A 1 387 ILE 387 387 ILE ILE A . A 1 388 ASN 388 388 ASN ASN A . A 1 389 LEU 389 389 LEU LEU A . A 1 390 LEU 390 390 LEU LEU A . A 1 391 TYR 391 391 TYR TYR A . A 1 392 ASN 392 392 ASN ASN A . A 1 393 THR 393 393 THR THR A . A 1 394 SER 394 394 SER SER A . A 1 395 ASP 395 395 ASP ASP A . A 1 396 LEU 396 396 LEU LEU A . A 1 397 HIS 397 397 HIS HIS A . A 1 398 LYS 398 398 LYS LYS A . A 1 399 LYS 399 399 LYS LYS A . A 1 400 LEU 400 400 LEU LEU A . A 1 401 ALA 401 401 ALA ALA A . A 1 402 ILE 402 402 ILE ILE A . A 1 403 ALA 403 403 ALA ALA A . A 1 404 ALA 404 404 ALA ALA A . A 1 405 SER 405 405 SER SER A . A 1 406 SER 406 406 SER SER A . A 1 407 LEU 407 407 LEU LEU A . A 1 408 TRP 408 408 TRP TRP A . A 1 409 LYS 409 409 LYS LYS A . A 1 410 LYS 410 410 LYS LYS A . A 1 411 ASN 411 411 ASN ASN A . A 1 412 ILE 412 412 ILE ILE A . A 1 413 GLY 413 413 GLY GLY A . A 1 414 VAL 414 414 VAL VAL A . A 1 415 ASN 415 415 ASN ASN A . A 1 416 VAL 416 416 VAL VAL A . A 1 417 LYS 417 417 LYS LYS A . A 1 418 LEU 418 418 LEU LEU A . A 1 419 VAL 419 419 VAL VAL A . A 1 420 ASN 420 420 ASN ASN A . A 1 421 GLN 421 421 GLN GLN A . A 1 422 GLU 422 422 GLU GLU A . A 1 423 TRP 423 423 TRP TRP A . A 1 424 LYS 424 424 LYS LYS A . A 1 425 THR 425 425 THR THR A . A 1 426 PHE 426 426 PHE PHE A . A 1 427 LEU 427 427 LEU LEU A . A 1 428 ASP 428 428 ASP ASP A . A 1 429 THR 429 429 THR THR A . A 1 430 ARG 430 430 ARG ARG A . A 1 431 HIS 431 431 HIS HIS A . A 1 432 GLN 432 432 GLN GLN A . A 1 433 GLY 433 433 GLY GLY A . A 1 434 THR 434 434 THR THR A . A 1 435 PHE 435 435 PHE PHE A . A 1 436 ASP 436 436 ASP ASP A . A 1 437 VAL 437 437 VAL VAL A . A 1 438 ALA 438 438 ALA ALA A . A 1 439 ARG 439 439 ARG ARG A . A 1 440 ALA 440 440 ALA ALA A . A 1 441 GLY 441 441 GLY GLY A . A 1 442 TRP 442 442 TRP TRP A . A 1 443 CYS 443 443 CYS CYS A . A 1 444 ALA 444 444 ALA ALA A . A 1 445 ASP 445 445 ASP ASP A . A 1 446 TYR 446 446 TYR TYR A . A 1 447 ASN 447 447 ASN ASN A . A 1 448 GLU 448 448 GLU GLU A . A 1 449 PRO 449 449 PRO PRO A . A 1 450 THR 450 450 THR THR A . A 1 451 SER 451 451 SER SER A . A 1 452 PHE 452 452 PHE PHE A . A 1 453 LEU 453 453 LEU LEU A . A 1 454 ASN 454 454 ASN ASN A . A 1 455 THR 455 455 THR THR A . A 1 456 MET 456 456 MET MET A . A 1 457 LEU 457 457 LEU LEU A . A 1 458 SER 458 458 SER SER A . A 1 459 ASN 459 459 ASN ASN A . A 1 460 SER 460 460 SER SER A . A 1 461 SER 461 461 SER SER A . A 1 462 MET 462 462 MET MET A . A 1 463 ASN 463 463 ASN ASN A . A 1 464 THR 464 464 THR THR A . A 1 465 ALA 465 465 ALA ALA A . A 1 466 HIS 466 466 HIS HIS A . A 1 467 TYR 467 467 TYR TYR A . A 1 468 LYS 468 468 LYS LYS A . A 1 469 SER 469 469 SER SER A . A 1 470 PRO 470 470 PRO PRO A . A 1 471 ALA 471 471 ALA ALA A . A 1 472 PHE 472 472 PHE PHE A . A 1 473 ASP 473 473 ASP ASP A . A 1 474 SER 474 474 SER SER A . A 1 475 ILE 475 475 ILE ILE A . A 1 476 MET 476 476 MET MET A . A 1 477 ALA 477 477 ALA ALA A . A 1 478 GLU 478 478 GLU GLU A . A 1 479 THR 479 479 THR THR A . A 1 480 LEU 480 480 LEU LEU A . A 1 481 LYS 481 481 LYS LYS A . A 1 482 VAL 482 482 VAL VAL A . A 1 483 THR 483 483 THR THR A . A 1 484 ASP 484 484 ASP ASP A . A 1 485 GLU 485 485 GLU GLU A . A 1 486 ALA 486 486 ALA ALA A . A 1 487 GLN 487 487 GLN GLN A . A 1 488 ARG 488 488 ARG ARG A . A 1 489 THR 489 489 THR THR A . A 1 490 ALA 490 490 ALA ALA A . A 1 491 LEU 491 491 LEU LEU A . A 1 492 TYR 492 492 TYR TYR A . A 1 493 THR 493 493 THR THR A . A 1 494 LYS 494 494 LYS LYS A . A 1 495 ALA 495 495 ALA ALA A . A 1 496 GLU 496 496 GLU GLU A . A 1 497 GLN 497 497 GLN GLN A . A 1 498 GLN 498 498 GLN GLN A . A 1 499 LEU 499 499 LEU LEU A . A 1 500 ASP 500 500 ASP ASP A . A 1 501 LYS 501 501 LYS LYS A . A 1 502 ASP 502 502 ASP ASP A . A 1 503 SER 503 503 SER SER A . A 1 504 ALA 504 504 ALA ALA A . A 1 505 ILE 505 505 ILE ILE A . A 1 506 VAL 506 506 VAL VAL A . A 1 507 PRO 507 507 PRO PRO A . A 1 508 VAL 508 508 VAL VAL A . A 1 509 TYR 509 509 TYR TYR A . A 1 510 TYR 510 510 TYR TYR A . A 1 511 TYR 511 511 TYR TYR A . A 1 512 VAL 512 512 VAL VAL A . A 1 513 ASN 513 513 ASN ASN A . A 1 514 ALA 514 514 ALA ALA A . A 1 515 ARG 515 515 ARG ARG A . A 1 516 LEU 516 516 LEU LEU A . A 1 517 VAL 517 517 VAL VAL A . A 1 518 LYS 518 518 LYS LYS A . A 1 519 PRO 519 519 PRO PRO A . A 1 520 TRP 520 520 TRP TRP A . A 1 521 VAL 521 521 VAL VAL A . A 1 522 GLY 522 522 GLY GLY A . A 1 523 GLY 523 523 GLY GLY A . A 1 524 TYR 524 524 TYR TYR A . A 1 525 THR 525 525 THR THR A . A 1 526 GLY 526 526 GLY GLY A . A 1 527 LYS 527 527 LYS LYS A . A 1 528 ASP 528 528 ASP ASP A . A 1 529 PRO 529 529 PRO PRO A . A 1 530 LEU 530 530 LEU LEU A . A 1 531 ASP 531 531 ASP ASP A . A 1 532 ASN 532 532 ASN ASN A . A 1 533 THR 533 533 THR THR A . A 1 534 TYR 534 534 TYR TYR A . A 1 535 THR 535 535 THR THR A . A 1 536 ARG 536 536 ARG ARG A . A 1 537 ASN 537 537 ASN ASN A . A 1 538 MET 538 538 MET MET A . A 1 539 TYR 539 539 TYR TYR A . A 1 540 ILE 540 540 ILE ILE A . A 1 541 VAL 541 541 VAL VAL A . A 1 542 LYS 542 542 LYS LYS A . A 1 543 HIS 543 543 HIS HIS A . # # loop_ # #