data_9A4K # _entry.id 9A4K # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A4K _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-22 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A4K pdb_00009a4k 10.2210/pdb9a4k/pdb PDB-Dev PDBDEV_00000241 PDBDEV_00000241 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A4K # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 37283.74 1 ACCD_BACSU 1 MAN POLYMER . 42226.125 2 ACCA_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQGMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFIIFTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIGEKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQGMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFIIFTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIGEKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD . A polypeptide(L) 2 . NO NO MAPRLEFEKPVIELQTKIAELKKFTQDSDMDLSAEIERLEDRLAKLQDDIYKNLKPWDRVQIARLADRPTTLDYIEHLFTDFFECHGDRAYGDDEAIVGGIAKFHGLPVTVIGHQRGKDTKENLVRNFGMPHPEGYRKALRLMKQADKFNRPIICFIDTKGAYPGRAAEERGQSEAIAKNLFEMAGLRVPVICIVIGEGGSGGALGLGVGNHLHMLENSTYSVISPEGAAALLWKDSSLAKKAAETMKITAPDLKELGIIDHMIKEVKGGAHHDVKLQASYMDETLKQSLKTLLKLSEEELVQQRYEKYKAIGKVSVEDQYIGVN MAPRLEFEKPVIELQTKIAELKKFTQDSDMDLSAEIERLEDRLAKLQDDIYKNLKPWDRVQIARLADRPTTLDYIEHLFTDFFECHGDRAYGDDEAIVGGIAKFHGLPVTVIGHQRGKDTKENLVRNFGMPHPEGYRKALRLMKQADKFNRPIICFIDTKGAYPGRAAEERGQSEAIAKNLFEMAGLRVPVICIVIGEGGSGGALGLGVGNHLHMLENSTYSVISPEGAAALLWKDSSLAKKAAETMKITAPDLKELGIIDHMIKEVKGGAHHDVKLQASYMDETLKQSLKTLLKLSEEELVQQRYEKYKAIGKVSVEDQYIGVN . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . LEU 2 1 . LYS 3 1 . ASP 4 1 . ILE 5 1 . PHE 6 1 . THR 7 1 . LYS 8 1 . LYS 9 1 . LYS 10 1 . LYS 11 1 . TYR 12 1 . ALA 13 1 . SER 14 1 . VAL 15 1 . PRO 16 1 . SER 17 1 . ASP 18 1 . GLN 19 1 . ALA 20 1 . LYS 21 1 . HIS 22 1 . ASP 23 1 . VAL 24 1 . PRO 25 1 . GLU 26 1 . GLY 27 1 . ILE 28 1 . MET 29 1 . THR 30 1 . LYS 31 1 . CYS 32 1 . PRO 33 1 . LYS 34 1 . CYS 35 1 . LYS 36 1 . LYS 37 1 . ILE 38 1 . MET 39 1 . LEU 40 1 . THR 41 1 . LYS 42 1 . GLU 43 1 . LEU 44 1 . ASP 45 1 . LYS 46 1 . ASN 47 1 . MET 48 1 . ARG 49 1 . VAL 50 1 . CYS 51 1 . MET 52 1 . ASN 53 1 . CYS 54 1 . ASP 55 1 . TYR 56 1 . HIS 57 1 . PHE 58 1 . PRO 59 1 . MET 60 1 . ASN 61 1 . ALA 62 1 . LYS 63 1 . GLN 64 1 . ARG 65 1 . ILE 66 1 . GLU 67 1 . SER 68 1 . LEU 69 1 . MET 70 1 . ASP 71 1 . GLU 72 1 . GLN 73 1 . SER 74 1 . PHE 75 1 . GLU 76 1 . GLU 77 1 . PHE 78 1 . ASN 79 1 . GLN 80 1 . GLY 81 1 . MET 82 1 . LEU 83 1 . SER 84 1 . GLU 85 1 . ASN 86 1 . PRO 87 1 . LEU 88 1 . GLY 89 1 . PHE 90 1 . PRO 91 1 . GLY 92 1 . TYR 93 1 . LEU 94 1 . GLU 95 1 . LYS 96 1 . LEU 97 1 . GLU 98 1 . LYS 99 1 . ASP 100 1 . ARG 101 1 . GLU 102 1 . LYS 103 1 . THR 104 1 . SER 105 1 . LEU 106 1 . ASN 107 1 . GLU 108 1 . ALA 109 1 . VAL 110 1 . VAL 111 1 . THR 112 1 . GLY 113 1 . LYS 114 1 . GLY 115 1 . THR 116 1 . ILE 117 1 . GLY 118 1 . GLY 119 1 . HIS 120 1 . PRO 121 1 . ALA 122 1 . VAL 123 1 . VAL 124 1 . ALA 125 1 . VAL 126 1 . MET 127 1 . ASP 128 1 . SER 129 1 . SER 130 1 . PHE 131 1 . ARG 132 1 . MET 133 1 . GLY 134 1 . SER 135 1 . MET 136 1 . GLY 137 1 . SER 138 1 . VAL 139 1 . VAL 140 1 . GLY 141 1 . GLU 142 1 . LYS 143 1 . ILE 144 1 . THR 145 1 . LEU 146 1 . ALA 147 1 . ILE 148 1 . GLU 149 1 . LYS 150 1 . ALA 151 1 . LYS 152 1 . ALA 153 1 . ASP 154 1 . LYS 155 1 . VAL 156 1 . PRO 157 1 . PHE 158 1 . ILE 159 1 . ILE 160 1 . PHE 161 1 . THR 162 1 . ALA 163 1 . SER 164 1 . GLY 165 1 . GLY 166 1 . ALA 167 1 . ARG 168 1 . MET 169 1 . GLN 170 1 . GLU 171 1 . GLY 172 1 . VAL 173 1 . LEU 174 1 . SER 175 1 . LEU 176 1 . MET 177 1 . GLN 178 1 . MET 179 1 . ALA 180 1 . LYS 181 1 . THR 182 1 . SER 183 1 . SER 184 1 . ALA 185 1 . LEU 186 1 . LYS 187 1 . LEU 188 1 . PHE 189 1 . SER 190 1 . GLU 191 1 . GLU 192 1 . GLN 193 1 . GLY 194 1 . LEU 195 1 . ILE 196 1 . ILE 197 1 . SER 198 1 . VAL 199 1 . MET 200 1 . THR 201 1 . HIS 202 1 . PRO 203 1 . THR 204 1 . THR 205 1 . GLY 206 1 . GLY 207 1 . VAL 208 1 . SER 209 1 . ALA 210 1 . SER 211 1 . PHE 212 1 . ALA 213 1 . SER 214 1 . LEU 215 1 . GLY 216 1 . ASP 217 1 . TYR 218 1 . ASN 219 1 . PHE 220 1 . ALA 221 1 . GLU 222 1 . PRO 223 1 . GLY 224 1 . ALA 225 1 . LEU 226 1 . ILE 227 1 . GLY 228 1 . PHE 229 1 . ALA 230 1 . GLY 231 1 . ARG 232 1 . ARG 233 1 . ILE 234 1 . ILE 235 1 . GLU 236 1 . GLN 237 1 . THR 238 1 . ILE 239 1 . GLY 240 1 . GLU 241 1 . LYS 242 1 . LEU 243 1 . PRO 244 1 . GLU 245 1 . ASP 246 1 . PHE 247 1 . GLN 248 1 . THR 249 1 . ALA 250 1 . GLU 251 1 . PHE 252 1 . LEU 253 1 . LEU 254 1 . LYS 255 1 . HIS 256 1 . GLY 257 1 . GLN 258 1 . LEU 259 1 . ASP 260 1 . ALA 261 1 . VAL 262 1 . ILE 263 1 . HIS 264 1 . ARG 265 1 . ASP 266 1 . ASP 267 1 . MET 268 1 . LYS 269 1 . LYS 270 1 . THR 271 1 . LEU 272 1 . GLU 273 1 . ASN 274 1 . LEU 275 1 . LEU 276 1 . ASP 277 1 . MET 278 1 . HIS 279 1 . GLN 280 1 . THR 281 1 . GLY 282 1 . GLY 283 1 . ASP 284 1 . ILE 285 1 . GLU 286 1 . TRP 287 1 . LEU 288 1 . GLN 289 1 . ASP 290 2 . MET 1 2 . ALA 2 2 . PRO 3 2 . ARG 4 2 . LEU 5 2 . GLU 6 2 . PHE 7 2 . GLU 8 2 . LYS 9 2 . PRO 10 2 . VAL 11 2 . ILE 12 2 . GLU 13 2 . LEU 14 2 . GLN 15 2 . THR 16 2 . LYS 17 2 . ILE 18 2 . ALA 19 2 . GLU 20 2 . LEU 21 2 . LYS 22 2 . LYS 23 2 . PHE 24 2 . THR 25 2 . GLN 26 2 . ASP 27 2 . SER 28 2 . ASP 29 2 . MET 30 2 . ASP 31 2 . LEU 32 2 . SER 33 2 . ALA 34 2 . GLU 35 2 . ILE 36 2 . GLU 37 2 . ARG 38 2 . LEU 39 2 . GLU 40 2 . ASP 41 2 . ARG 42 2 . LEU 43 2 . ALA 44 2 . LYS 45 2 . LEU 46 2 . GLN 47 2 . ASP 48 2 . ASP 49 2 . ILE 50 2 . TYR 51 2 . LYS 52 2 . ASN 53 2 . LEU 54 2 . LYS 55 2 . PRO 56 2 . TRP 57 2 . ASP 58 2 . ARG 59 2 . VAL 60 2 . GLN 61 2 . ILE 62 2 . ALA 63 2 . ARG 64 2 . LEU 65 2 . ALA 66 2 . ASP 67 2 . ARG 68 2 . PRO 69 2 . THR 70 2 . THR 71 2 . LEU 72 2 . ASP 73 2 . TYR 74 2 . ILE 75 2 . GLU 76 2 . HIS 77 2 . LEU 78 2 . PHE 79 2 . THR 80 2 . ASP 81 2 . PHE 82 2 . PHE 83 2 . GLU 84 2 . CYS 85 2 . HIS 86 2 . GLY 87 2 . ASP 88 2 . ARG 89 2 . ALA 90 2 . TYR 91 2 . GLY 92 2 . ASP 93 2 . ASP 94 2 . GLU 95 2 . ALA 96 2 . ILE 97 2 . VAL 98 2 . GLY 99 2 . GLY 100 2 . ILE 101 2 . ALA 102 2 . LYS 103 2 . PHE 104 2 . HIS 105 2 . GLY 106 2 . LEU 107 2 . PRO 108 2 . VAL 109 2 . THR 110 2 . VAL 111 2 . ILE 112 2 . GLY 113 2 . HIS 114 2 . GLN 115 2 . ARG 116 2 . GLY 117 2 . LYS 118 2 . ASP 119 2 . THR 120 2 . LYS 121 2 . GLU 122 2 . ASN 123 2 . LEU 124 2 . VAL 125 2 . ARG 126 2 . ASN 127 2 . PHE 128 2 . GLY 129 2 . MET 130 2 . PRO 131 2 . HIS 132 2 . PRO 133 2 . GLU 134 2 . GLY 135 2 . TYR 136 2 . ARG 137 2 . LYS 138 2 . ALA 139 2 . LEU 140 2 . ARG 141 2 . LEU 142 2 . MET 143 2 . LYS 144 2 . GLN 145 2 . ALA 146 2 . ASP 147 2 . LYS 148 2 . PHE 149 2 . ASN 150 2 . ARG 151 2 . PRO 152 2 . ILE 153 2 . ILE 154 2 . CYS 155 2 . PHE 156 2 . ILE 157 2 . ASP 158 2 . THR 159 2 . LYS 160 2 . GLY 161 2 . ALA 162 2 . TYR 163 2 . PRO 164 2 . GLY 165 2 . ARG 166 2 . ALA 167 2 . ALA 168 2 . GLU 169 2 . GLU 170 2 . ARG 171 2 . GLY 172 2 . GLN 173 2 . SER 174 2 . GLU 175 2 . ALA 176 2 . ILE 177 2 . ALA 178 2 . LYS 179 2 . ASN 180 2 . LEU 181 2 . PHE 182 2 . GLU 183 2 . MET 184 2 . ALA 185 2 . GLY 186 2 . LEU 187 2 . ARG 188 2 . VAL 189 2 . PRO 190 2 . VAL 191 2 . ILE 192 2 . CYS 193 2 . ILE 194 2 . VAL 195 2 . ILE 196 2 . GLY 197 2 . GLU 198 2 . GLY 199 2 . GLY 200 2 . SER 201 2 . GLY 202 2 . GLY 203 2 . ALA 204 2 . LEU 205 2 . GLY 206 2 . LEU 207 2 . GLY 208 2 . VAL 209 2 . GLY 210 2 . ASN 211 2 . HIS 212 2 . LEU 213 2 . HIS 214 2 . MET 215 2 . LEU 216 2 . GLU 217 2 . ASN 218 2 . SER 219 2 . THR 220 2 . TYR 221 2 . SER 222 2 . VAL 223 2 . ILE 224 2 . SER 225 2 . PRO 226 2 . GLU 227 2 . GLY 228 2 . ALA 229 2 . ALA 230 2 . ALA 231 2 . LEU 232 2 . LEU 233 2 . TRP 234 2 . LYS 235 2 . ASP 236 2 . SER 237 2 . SER 238 2 . LEU 239 2 . ALA 240 2 . LYS 241 2 . LYS 242 2 . ALA 243 2 . ALA 244 2 . GLU 245 2 . THR 246 2 . MET 247 2 . LYS 248 2 . ILE 249 2 . THR 250 2 . ALA 251 2 . PRO 252 2 . ASP 253 2 . LEU 254 2 . LYS 255 2 . GLU 256 2 . LEU 257 2 . GLY 258 2 . ILE 259 2 . ILE 260 2 . ASP 261 2 . HIS 262 2 . MET 263 2 . ILE 264 2 . LYS 265 2 . GLU 266 2 . VAL 267 2 . LYS 268 2 . GLY 269 2 . GLY 270 2 . ALA 271 2 . HIS 272 2 . HIS 273 2 . ASP 274 2 . VAL 275 2 . LYS 276 2 . LEU 277 2 . GLN 278 2 . ALA 279 2 . SER 280 2 . TYR 281 2 . MET 282 2 . ASP 283 2 . GLU 284 2 . THR 285 2 . LEU 286 2 . LYS 287 2 . GLN 288 2 . SER 289 2 . LEU 290 2 . LYS 291 2 . THR 292 2 . LEU 293 2 . LEU 294 2 . LYS 295 2 . LEU 296 2 . SER 297 2 . GLU 298 2 . GLU 299 2 . GLU 300 2 . LEU 301 2 . VAL 302 2 . GLN 303 2 . GLN 304 2 . ARG 305 2 . TYR 306 2 . GLU 307 2 . LYS 308 2 . TYR 309 2 . LYS 310 2 . ALA 311 2 . ILE 312 2 . GLY 313 2 . LYS 314 2 . VAL 315 2 . SER 316 2 . VAL 317 2 . GLU 318 2 . ASP 319 2 . GLN 320 2 . TYR 321 2 . ILE 322 2 . GLY 323 2 . VAL 324 2 . ASN 325 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LYS LYS 1 . ACCD_BACSU ACCA_BACSU 1 2 1 1 1 SDA 150 310 LYS LYS 1 . ACCD_BACSU ACCA_BACSU 1 2 2 2 1 SDA 255 121 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A B . . LYS LYS . 25 1 2 1 1 by-residue NO 0.95 "upper bound" 150 310 . . A B . . LYS LYS . 25 1 2 2 2 by-residue NO 0.95 "upper bound" 255 121 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET ASP 1 1 1 290 MET ASN 2 2 1 325 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A ACCD_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B ACCA_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of ACCD-ACCA by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name ACCD-ACCA # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A ACCD_BACSU 1 1 1 1 1 B ACCA_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A4K _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of ACCD-ACCA by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type ACCD_BACSU 1 A . . . . . . ACCA_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . C0SP93 . MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQGMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFIIFTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIGEKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD B UNP . 2 2 1 . O34847 . MAPRLEFEKPVIELQTKIAELKKFTQDSDMDLSAEIERLEDRLAKLQDDIYKNLKPWDRVQIARLADRPTTLDYIEHLFTDFFECHGDRAYGDDEAIVGGIAKFHGLPVTVIGHQRGKDTKENLVRNFGMPHPEGYRKALRLMKQADKFNRPIICFIDTKGAYPGRAAEERGQSEAIAKNLFEMAGLRVPVICIVIGEGGSGGALGLGVGNHLHMLENSTYSVISPEGAAALLWKDSSLAKKAAETMKITAPDLKELGIIDHMIKEVKGGAHHDVKLQASYMDETLKQSLKTLLKLSEEELVQQRYEKYKAIGKVSVEDQYIGVN # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 290 1 1 290 2 1 325 2 1 325 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 LEU 2 2 LEU LEU A . A 1 3 LYS 3 3 LYS LYS A . A 1 4 ASP 4 4 ASP ASP A . A 1 5 ILE 5 5 ILE ILE A . A 1 6 PHE 6 6 PHE PHE A . A 1 7 THR 7 7 THR THR A . A 1 8 LYS 8 8 LYS LYS A . A 1 9 LYS 9 9 LYS LYS A . A 1 10 LYS 10 10 LYS LYS A . A 1 11 LYS 11 11 LYS LYS A . A 1 12 TYR 12 12 TYR TYR A . A 1 13 ALA 13 13 ALA ALA A . A 1 14 SER 14 14 SER SER A . A 1 15 VAL 15 15 VAL VAL A . A 1 16 PRO 16 16 PRO PRO A . A 1 17 SER 17 17 SER SER A . A 1 18 ASP 18 18 ASP ASP A . A 1 19 GLN 19 19 GLN GLN A . A 1 20 ALA 20 20 ALA ALA A . A 1 21 LYS 21 21 LYS LYS A . A 1 22 HIS 22 22 HIS HIS A . A 1 23 ASP 23 23 ASP ASP A . A 1 24 VAL 24 24 VAL VAL A . A 1 25 PRO 25 25 PRO PRO A . A 1 26 GLU 26 26 GLU GLU A . A 1 27 GLY 27 27 GLY GLY A . A 1 28 ILE 28 28 ILE ILE A . A 1 29 MET 29 29 MET MET A . A 1 30 THR 30 30 THR THR A . A 1 31 LYS 31 31 LYS LYS A . A 1 32 CYS 32 32 CYS CYS A . A 1 33 PRO 33 33 PRO PRO A . A 1 34 LYS 34 34 LYS LYS A . A 1 35 CYS 35 35 CYS CYS A . A 1 36 LYS 36 36 LYS LYS A . A 1 37 LYS 37 37 LYS LYS A . A 1 38 ILE 38 38 ILE ILE A . A 1 39 MET 39 39 MET MET A . A 1 40 LEU 40 40 LEU LEU A . A 1 41 THR 41 41 THR THR A . A 1 42 LYS 42 42 LYS LYS A . A 1 43 GLU 43 43 GLU GLU A . A 1 44 LEU 44 44 LEU LEU A . A 1 45 ASP 45 45 ASP ASP A . A 1 46 LYS 46 46 LYS LYS A . A 1 47 ASN 47 47 ASN ASN A . A 1 48 MET 48 48 MET MET A . A 1 49 ARG 49 49 ARG ARG A . A 1 50 VAL 50 50 VAL VAL A . A 1 51 CYS 51 51 CYS CYS A . A 1 52 MET 52 52 MET MET A . A 1 53 ASN 53 53 ASN ASN A . A 1 54 CYS 54 54 CYS CYS A . A 1 55 ASP 55 55 ASP ASP A . A 1 56 TYR 56 56 TYR TYR A . A 1 57 HIS 57 57 HIS HIS A . A 1 58 PHE 58 58 PHE PHE A . A 1 59 PRO 59 59 PRO PRO A . A 1 60 MET 60 60 MET MET A . A 1 61 ASN 61 61 ASN ASN A . A 1 62 ALA 62 62 ALA ALA A . A 1 63 LYS 63 63 LYS LYS A . A 1 64 GLN 64 64 GLN GLN A . A 1 65 ARG 65 65 ARG ARG A . A 1 66 ILE 66 66 ILE ILE A . A 1 67 GLU 67 67 GLU GLU A . A 1 68 SER 68 68 SER SER A . A 1 69 LEU 69 69 LEU LEU A . A 1 70 MET 70 70 MET MET A . A 1 71 ASP 71 71 ASP ASP A . A 1 72 GLU 72 72 GLU GLU A . A 1 73 GLN 73 73 GLN GLN A . A 1 74 SER 74 74 SER SER A . A 1 75 PHE 75 75 PHE PHE A . A 1 76 GLU 76 76 GLU GLU A . A 1 77 GLU 77 77 GLU GLU A . A 1 78 PHE 78 78 PHE PHE A . A 1 79 ASN 79 79 ASN ASN A . A 1 80 GLN 80 80 GLN GLN A . A 1 81 GLY 81 81 GLY GLY A . A 1 82 MET 82 82 MET MET A . A 1 83 LEU 83 83 LEU LEU A . A 1 84 SER 84 84 SER SER A . A 1 85 GLU 85 85 GLU GLU A . A 1 86 ASN 86 86 ASN ASN A . A 1 87 PRO 87 87 PRO PRO A . A 1 88 LEU 88 88 LEU LEU A . A 1 89 GLY 89 89 GLY GLY A . A 1 90 PHE 90 90 PHE PHE A . A 1 91 PRO 91 91 PRO PRO A . A 1 92 GLY 92 92 GLY GLY A . A 1 93 TYR 93 93 TYR TYR A . A 1 94 LEU 94 94 LEU LEU A . A 1 95 GLU 95 95 GLU GLU A . A 1 96 LYS 96 96 LYS LYS A . A 1 97 LEU 97 97 LEU LEU A . A 1 98 GLU 98 98 GLU GLU A . A 1 99 LYS 99 99 LYS LYS A . A 1 100 ASP 100 100 ASP ASP A . A 1 101 ARG 101 101 ARG ARG A . A 1 102 GLU 102 102 GLU GLU A . A 1 103 LYS 103 103 LYS LYS A . A 1 104 THR 104 104 THR THR A . A 1 105 SER 105 105 SER SER A . A 1 106 LEU 106 106 LEU LEU A . A 1 107 ASN 107 107 ASN ASN A . A 1 108 GLU 108 108 GLU GLU A . A 1 109 ALA 109 109 ALA ALA A . A 1 110 VAL 110 110 VAL VAL A . A 1 111 VAL 111 111 VAL VAL A . A 1 112 THR 112 112 THR THR A . A 1 113 GLY 113 113 GLY GLY A . A 1 114 LYS 114 114 LYS LYS A . A 1 115 GLY 115 115 GLY GLY A . A 1 116 THR 116 116 THR THR A . A 1 117 ILE 117 117 ILE ILE A . A 1 118 GLY 118 118 GLY GLY A . A 1 119 GLY 119 119 GLY GLY A . A 1 120 HIS 120 120 HIS HIS A . A 1 121 PRO 121 121 PRO PRO A . A 1 122 ALA 122 122 ALA ALA A . A 1 123 VAL 123 123 VAL VAL A . A 1 124 VAL 124 124 VAL VAL A . A 1 125 ALA 125 125 ALA ALA A . A 1 126 VAL 126 126 VAL VAL A . A 1 127 MET 127 127 MET MET A . A 1 128 ASP 128 128 ASP ASP A . A 1 129 SER 129 129 SER SER A . A 1 130 SER 130 130 SER SER A . A 1 131 PHE 131 131 PHE PHE A . A 1 132 ARG 132 132 ARG ARG A . A 1 133 MET 133 133 MET MET A . A 1 134 GLY 134 134 GLY GLY A . A 1 135 SER 135 135 SER SER A . A 1 136 MET 136 136 MET MET A . A 1 137 GLY 137 137 GLY GLY A . A 1 138 SER 138 138 SER SER A . A 1 139 VAL 139 139 VAL VAL A . A 1 140 VAL 140 140 VAL VAL A . A 1 141 GLY 141 141 GLY GLY A . A 1 142 GLU 142 142 GLU GLU A . A 1 143 LYS 143 143 LYS LYS A . A 1 144 ILE 144 144 ILE ILE A . A 1 145 THR 145 145 THR THR A . A 1 146 LEU 146 146 LEU LEU A . A 1 147 ALA 147 147 ALA ALA A . A 1 148 ILE 148 148 ILE ILE A . A 1 149 GLU 149 149 GLU GLU A . A 1 150 LYS 150 150 LYS LYS A . A 1 151 ALA 151 151 ALA ALA A . A 1 152 LYS 152 152 LYS LYS A . A 1 153 ALA 153 153 ALA ALA A . A 1 154 ASP 154 154 ASP ASP A . A 1 155 LYS 155 155 LYS LYS A . A 1 156 VAL 156 156 VAL VAL A . A 1 157 PRO 157 157 PRO PRO A . A 1 158 PHE 158 158 PHE PHE A . A 1 159 ILE 159 159 ILE ILE A . A 1 160 ILE 160 160 ILE ILE A . A 1 161 PHE 161 161 PHE PHE A . A 1 162 THR 162 162 THR THR A . A 1 163 ALA 163 163 ALA ALA A . A 1 164 SER 164 164 SER SER A . A 1 165 GLY 165 165 GLY GLY A . A 1 166 GLY 166 166 GLY GLY A . A 1 167 ALA 167 167 ALA ALA A . A 1 168 ARG 168 168 ARG ARG A . A 1 169 MET 169 169 MET MET A . A 1 170 GLN 170 170 GLN GLN A . A 1 171 GLU 171 171 GLU GLU A . A 1 172 GLY 172 172 GLY GLY A . A 1 173 VAL 173 173 VAL VAL A . A 1 174 LEU 174 174 LEU LEU A . A 1 175 SER 175 175 SER SER A . A 1 176 LEU 176 176 LEU LEU A . A 1 177 MET 177 177 MET MET A . A 1 178 GLN 178 178 GLN GLN A . A 1 179 MET 179 179 MET MET A . A 1 180 ALA 180 180 ALA ALA A . A 1 181 LYS 181 181 LYS LYS A . A 1 182 THR 182 182 THR THR A . A 1 183 SER 183 183 SER SER A . A 1 184 SER 184 184 SER SER A . A 1 185 ALA 185 185 ALA ALA A . A 1 186 LEU 186 186 LEU LEU A . A 1 187 LYS 187 187 LYS LYS A . A 1 188 LEU 188 188 LEU LEU A . A 1 189 PHE 189 189 PHE PHE A . A 1 190 SER 190 190 SER SER A . A 1 191 GLU 191 191 GLU GLU A . A 1 192 GLU 192 192 GLU GLU A . A 1 193 GLN 193 193 GLN GLN A . A 1 194 GLY 194 194 GLY GLY A . A 1 195 LEU 195 195 LEU LEU A . A 1 196 ILE 196 196 ILE ILE A . A 1 197 ILE 197 197 ILE ILE A . A 1 198 SER 198 198 SER SER A . A 1 199 VAL 199 199 VAL VAL A . A 1 200 MET 200 200 MET MET A . A 1 201 THR 201 201 THR THR A . A 1 202 HIS 202 202 HIS HIS A . A 1 203 PRO 203 203 PRO PRO A . A 1 204 THR 204 204 THR THR A . A 1 205 THR 205 205 THR THR A . A 1 206 GLY 206 206 GLY GLY A . A 1 207 GLY 207 207 GLY GLY A . A 1 208 VAL 208 208 VAL VAL A . A 1 209 SER 209 209 SER SER A . A 1 210 ALA 210 210 ALA ALA A . A 1 211 SER 211 211 SER SER A . A 1 212 PHE 212 212 PHE PHE A . A 1 213 ALA 213 213 ALA ALA A . A 1 214 SER 214 214 SER SER A . A 1 215 LEU 215 215 LEU LEU A . A 1 216 GLY 216 216 GLY GLY A . A 1 217 ASP 217 217 ASP ASP A . A 1 218 TYR 218 218 TYR TYR A . A 1 219 ASN 219 219 ASN ASN A . A 1 220 PHE 220 220 PHE PHE A . A 1 221 ALA 221 221 ALA ALA A . A 1 222 GLU 222 222 GLU GLU A . A 1 223 PRO 223 223 PRO PRO A . A 1 224 GLY 224 224 GLY GLY A . A 1 225 ALA 225 225 ALA ALA A . A 1 226 LEU 226 226 LEU LEU A . A 1 227 ILE 227 227 ILE ILE A . A 1 228 GLY 228 228 GLY GLY A . A 1 229 PHE 229 229 PHE PHE A . A 1 230 ALA 230 230 ALA ALA A . A 1 231 GLY 231 231 GLY GLY A . A 1 232 ARG 232 232 ARG ARG A . A 1 233 ARG 233 233 ARG ARG A . A 1 234 ILE 234 234 ILE ILE A . A 1 235 ILE 235 235 ILE ILE A . A 1 236 GLU 236 236 GLU GLU A . A 1 237 GLN 237 237 GLN GLN A . A 1 238 THR 238 238 THR THR A . A 1 239 ILE 239 239 ILE ILE A . A 1 240 GLY 240 240 GLY GLY A . A 1 241 GLU 241 241 GLU GLU A . A 1 242 LYS 242 242 LYS LYS A . A 1 243 LEU 243 243 LEU LEU A . A 1 244 PRO 244 244 PRO PRO A . A 1 245 GLU 245 245 GLU GLU A . A 1 246 ASP 246 246 ASP ASP A . A 1 247 PHE 247 247 PHE PHE A . A 1 248 GLN 248 248 GLN GLN A . A 1 249 THR 249 249 THR THR A . A 1 250 ALA 250 250 ALA ALA A . A 1 251 GLU 251 251 GLU GLU A . A 1 252 PHE 252 252 PHE PHE A . A 1 253 LEU 253 253 LEU LEU A . A 1 254 LEU 254 254 LEU LEU A . A 1 255 LYS 255 255 LYS LYS A . A 1 256 HIS 256 256 HIS HIS A . A 1 257 GLY 257 257 GLY GLY A . A 1 258 GLN 258 258 GLN GLN A . A 1 259 LEU 259 259 LEU LEU A . A 1 260 ASP 260 260 ASP ASP A . A 1 261 ALA 261 261 ALA ALA A . A 1 262 VAL 262 262 VAL VAL A . A 1 263 ILE 263 263 ILE ILE A . A 1 264 HIS 264 264 HIS HIS A . A 1 265 ARG 265 265 ARG ARG A . A 1 266 ASP 266 266 ASP ASP A . A 1 267 ASP 267 267 ASP ASP A . A 1 268 MET 268 268 MET MET A . A 1 269 LYS 269 269 LYS LYS A . A 1 270 LYS 270 270 LYS LYS A . A 1 271 THR 271 271 THR THR A . A 1 272 LEU 272 272 LEU LEU A . A 1 273 GLU 273 273 GLU GLU A . A 1 274 ASN 274 274 ASN ASN A . A 1 275 LEU 275 275 LEU LEU A . A 1 276 LEU 276 276 LEU LEU A . A 1 277 ASP 277 277 ASP ASP A . A 1 278 MET 278 278 MET MET A . A 1 279 HIS 279 279 HIS HIS A . A 1 280 GLN 280 280 GLN GLN A . A 1 281 THR 281 281 THR THR A . A 1 282 GLY 282 282 GLY GLY A . A 1 283 GLY 283 283 GLY GLY A . A 1 284 ASP 284 284 ASP ASP A . A 1 285 ILE 285 285 ILE ILE A . A 1 286 GLU 286 286 GLU GLU A . A 1 287 TRP 287 287 TRP TRP A . A 1 288 LEU 288 288 LEU LEU A . A 1 289 GLN 289 289 GLN GLN A . A 1 290 ASP 290 290 ASP ASP A . B 2 1 MET 1 1 MET MET B . B 2 2 ALA 2 2 ALA ALA B . B 2 3 PRO 3 3 PRO PRO B . B 2 4 ARG 4 4 ARG ARG B . B 2 5 LEU 5 5 LEU LEU B . B 2 6 GLU 6 6 GLU GLU B . B 2 7 PHE 7 7 PHE PHE B . B 2 8 GLU 8 8 GLU GLU B . B 2 9 LYS 9 9 LYS LYS B . B 2 10 PRO 10 10 PRO PRO B . B 2 11 VAL 11 11 VAL VAL B . B 2 12 ILE 12 12 ILE ILE B . B 2 13 GLU 13 13 GLU GLU B . B 2 14 LEU 14 14 LEU LEU B . B 2 15 GLN 15 15 GLN GLN B . B 2 16 THR 16 16 THR THR B . B 2 17 LYS 17 17 LYS LYS B . B 2 18 ILE 18 18 ILE ILE B . B 2 19 ALA 19 19 ALA ALA B . B 2 20 GLU 20 20 GLU GLU B . B 2 21 LEU 21 21 LEU LEU B . B 2 22 LYS 22 22 LYS LYS B . B 2 23 LYS 23 23 LYS LYS B . B 2 24 PHE 24 24 PHE PHE B . B 2 25 THR 25 25 THR THR B . B 2 26 GLN 26 26 GLN GLN B . B 2 27 ASP 27 27 ASP ASP B . B 2 28 SER 28 28 SER SER B . B 2 29 ASP 29 29 ASP ASP B . B 2 30 MET 30 30 MET MET B . B 2 31 ASP 31 31 ASP ASP B . B 2 32 LEU 32 32 LEU LEU B . B 2 33 SER 33 33 SER SER B . B 2 34 ALA 34 34 ALA ALA B . B 2 35 GLU 35 35 GLU GLU B . B 2 36 ILE 36 36 ILE ILE B . B 2 37 GLU 37 37 GLU GLU B . B 2 38 ARG 38 38 ARG ARG B . B 2 39 LEU 39 39 LEU LEU B . B 2 40 GLU 40 40 GLU GLU B . B 2 41 ASP 41 41 ASP ASP B . B 2 42 ARG 42 42 ARG ARG B . B 2 43 LEU 43 43 LEU LEU B . B 2 44 ALA 44 44 ALA ALA B . B 2 45 LYS 45 45 LYS LYS B . B 2 46 LEU 46 46 LEU LEU B . B 2 47 GLN 47 47 GLN GLN B . B 2 48 ASP 48 48 ASP ASP B . B 2 49 ASP 49 49 ASP ASP B . B 2 50 ILE 50 50 ILE ILE B . B 2 51 TYR 51 51 TYR TYR B . B 2 52 LYS 52 52 LYS LYS B . B 2 53 ASN 53 53 ASN ASN B . B 2 54 LEU 54 54 LEU LEU B . B 2 55 LYS 55 55 LYS LYS B . B 2 56 PRO 56 56 PRO PRO B . B 2 57 TRP 57 57 TRP TRP B . B 2 58 ASP 58 58 ASP ASP B . B 2 59 ARG 59 59 ARG ARG B . B 2 60 VAL 60 60 VAL VAL B . B 2 61 GLN 61 61 GLN GLN B . B 2 62 ILE 62 62 ILE ILE B . B 2 63 ALA 63 63 ALA ALA B . B 2 64 ARG 64 64 ARG ARG B . B 2 65 LEU 65 65 LEU LEU B . B 2 66 ALA 66 66 ALA ALA B . B 2 67 ASP 67 67 ASP ASP B . B 2 68 ARG 68 68 ARG ARG B . B 2 69 PRO 69 69 PRO PRO B . B 2 70 THR 70 70 THR THR B . B 2 71 THR 71 71 THR THR B . B 2 72 LEU 72 72 LEU LEU B . B 2 73 ASP 73 73 ASP ASP B . B 2 74 TYR 74 74 TYR TYR B . B 2 75 ILE 75 75 ILE ILE B . B 2 76 GLU 76 76 GLU GLU B . B 2 77 HIS 77 77 HIS HIS B . B 2 78 LEU 78 78 LEU LEU B . B 2 79 PHE 79 79 PHE PHE B . B 2 80 THR 80 80 THR THR B . B 2 81 ASP 81 81 ASP ASP B . B 2 82 PHE 82 82 PHE PHE B . B 2 83 PHE 83 83 PHE PHE B . B 2 84 GLU 84 84 GLU GLU B . B 2 85 CYS 85 85 CYS CYS B . B 2 86 HIS 86 86 HIS HIS B . B 2 87 GLY 87 87 GLY GLY B . B 2 88 ASP 88 88 ASP ASP B . B 2 89 ARG 89 89 ARG ARG B . B 2 90 ALA 90 90 ALA ALA B . B 2 91 TYR 91 91 TYR TYR B . B 2 92 GLY 92 92 GLY GLY B . B 2 93 ASP 93 93 ASP ASP B . B 2 94 ASP 94 94 ASP ASP B . B 2 95 GLU 95 95 GLU GLU B . B 2 96 ALA 96 96 ALA ALA B . B 2 97 ILE 97 97 ILE ILE B . B 2 98 VAL 98 98 VAL VAL B . B 2 99 GLY 99 99 GLY GLY B . B 2 100 GLY 100 100 GLY GLY B . B 2 101 ILE 101 101 ILE ILE B . B 2 102 ALA 102 102 ALA ALA B . B 2 103 LYS 103 103 LYS LYS B . B 2 104 PHE 104 104 PHE PHE B . B 2 105 HIS 105 105 HIS HIS B . B 2 106 GLY 106 106 GLY GLY B . B 2 107 LEU 107 107 LEU LEU B . B 2 108 PRO 108 108 PRO PRO B . B 2 109 VAL 109 109 VAL VAL B . B 2 110 THR 110 110 THR THR B . B 2 111 VAL 111 111 VAL VAL B . B 2 112 ILE 112 112 ILE ILE B . B 2 113 GLY 113 113 GLY GLY B . B 2 114 HIS 114 114 HIS HIS B . B 2 115 GLN 115 115 GLN GLN B . B 2 116 ARG 116 116 ARG ARG B . B 2 117 GLY 117 117 GLY GLY B . B 2 118 LYS 118 118 LYS LYS B . B 2 119 ASP 119 119 ASP ASP B . B 2 120 THR 120 120 THR THR B . B 2 121 LYS 121 121 LYS LYS B . B 2 122 GLU 122 122 GLU GLU B . B 2 123 ASN 123 123 ASN ASN B . B 2 124 LEU 124 124 LEU LEU B . B 2 125 VAL 125 125 VAL VAL B . B 2 126 ARG 126 126 ARG ARG B . B 2 127 ASN 127 127 ASN ASN B . B 2 128 PHE 128 128 PHE PHE B . B 2 129 GLY 129 129 GLY GLY B . B 2 130 MET 130 130 MET MET B . B 2 131 PRO 131 131 PRO PRO B . B 2 132 HIS 132 132 HIS HIS B . B 2 133 PRO 133 133 PRO PRO B . B 2 134 GLU 134 134 GLU GLU B . B 2 135 GLY 135 135 GLY GLY B . B 2 136 TYR 136 136 TYR TYR B . B 2 137 ARG 137 137 ARG ARG B . B 2 138 LYS 138 138 LYS LYS B . B 2 139 ALA 139 139 ALA ALA B . B 2 140 LEU 140 140 LEU LEU B . B 2 141 ARG 141 141 ARG ARG B . B 2 142 LEU 142 142 LEU LEU B . B 2 143 MET 143 143 MET MET B . B 2 144 LYS 144 144 LYS LYS B . B 2 145 GLN 145 145 GLN GLN B . B 2 146 ALA 146 146 ALA ALA B . B 2 147 ASP 147 147 ASP ASP B . B 2 148 LYS 148 148 LYS LYS B . B 2 149 PHE 149 149 PHE PHE B . B 2 150 ASN 150 150 ASN ASN B . B 2 151 ARG 151 151 ARG ARG B . B 2 152 PRO 152 152 PRO PRO B . B 2 153 ILE 153 153 ILE ILE B . B 2 154 ILE 154 154 ILE ILE B . B 2 155 CYS 155 155 CYS CYS B . B 2 156 PHE 156 156 PHE PHE B . B 2 157 ILE 157 157 ILE ILE B . B 2 158 ASP 158 158 ASP ASP B . B 2 159 THR 159 159 THR THR B . B 2 160 LYS 160 160 LYS LYS B . B 2 161 GLY 161 161 GLY GLY B . B 2 162 ALA 162 162 ALA ALA B . B 2 163 TYR 163 163 TYR TYR B . B 2 164 PRO 164 164 PRO PRO B . B 2 165 GLY 165 165 GLY GLY B . B 2 166 ARG 166 166 ARG ARG B . B 2 167 ALA 167 167 ALA ALA B . B 2 168 ALA 168 168 ALA ALA B . B 2 169 GLU 169 169 GLU GLU B . B 2 170 GLU 170 170 GLU GLU B . B 2 171 ARG 171 171 ARG ARG B . B 2 172 GLY 172 172 GLY GLY B . B 2 173 GLN 173 173 GLN GLN B . B 2 174 SER 174 174 SER SER B . B 2 175 GLU 175 175 GLU GLU B . B 2 176 ALA 176 176 ALA ALA B . B 2 177 ILE 177 177 ILE ILE B . B 2 178 ALA 178 178 ALA ALA B . B 2 179 LYS 179 179 LYS LYS B . B 2 180 ASN 180 180 ASN ASN B . B 2 181 LEU 181 181 LEU LEU B . B 2 182 PHE 182 182 PHE PHE B . B 2 183 GLU 183 183 GLU GLU B . B 2 184 MET 184 184 MET MET B . B 2 185 ALA 185 185 ALA ALA B . B 2 186 GLY 186 186 GLY GLY B . B 2 187 LEU 187 187 LEU LEU B . B 2 188 ARG 188 188 ARG ARG B . B 2 189 VAL 189 189 VAL VAL B . B 2 190 PRO 190 190 PRO PRO B . B 2 191 VAL 191 191 VAL VAL B . B 2 192 ILE 192 192 ILE ILE B . B 2 193 CYS 193 193 CYS CYS B . B 2 194 ILE 194 194 ILE ILE B . B 2 195 VAL 195 195 VAL VAL B . B 2 196 ILE 196 196 ILE ILE B . B 2 197 GLY 197 197 GLY GLY B . B 2 198 GLU 198 198 GLU GLU B . B 2 199 GLY 199 199 GLY GLY B . B 2 200 GLY 200 200 GLY GLY B . B 2 201 SER 201 201 SER SER B . B 2 202 GLY 202 202 GLY GLY B . B 2 203 GLY 203 203 GLY GLY B . B 2 204 ALA 204 204 ALA ALA B . B 2 205 LEU 205 205 LEU LEU B . B 2 206 GLY 206 206 GLY GLY B . B 2 207 LEU 207 207 LEU LEU B . B 2 208 GLY 208 208 GLY GLY B . B 2 209 VAL 209 209 VAL VAL B . B 2 210 GLY 210 210 GLY GLY B . B 2 211 ASN 211 211 ASN ASN B . B 2 212 HIS 212 212 HIS HIS B . B 2 213 LEU 213 213 LEU LEU B . B 2 214 HIS 214 214 HIS HIS B . B 2 215 MET 215 215 MET MET B . B 2 216 LEU 216 216 LEU LEU B . B 2 217 GLU 217 217 GLU GLU B . B 2 218 ASN 218 218 ASN ASN B . B 2 219 SER 219 219 SER SER B . B 2 220 THR 220 220 THR THR B . B 2 221 TYR 221 221 TYR TYR B . B 2 222 SER 222 222 SER SER B . B 2 223 VAL 223 223 VAL VAL B . B 2 224 ILE 224 224 ILE ILE B . B 2 225 SER 225 225 SER SER B . B 2 226 PRO 226 226 PRO PRO B . B 2 227 GLU 227 227 GLU GLU B . B 2 228 GLY 228 228 GLY GLY B . B 2 229 ALA 229 229 ALA ALA B . B 2 230 ALA 230 230 ALA ALA B . B 2 231 ALA 231 231 ALA ALA B . B 2 232 LEU 232 232 LEU LEU B . B 2 233 LEU 233 233 LEU LEU B . B 2 234 TRP 234 234 TRP TRP B . B 2 235 LYS 235 235 LYS LYS B . B 2 236 ASP 236 236 ASP ASP B . B 2 237 SER 237 237 SER SER B . B 2 238 SER 238 238 SER SER B . B 2 239 LEU 239 239 LEU LEU B . B 2 240 ALA 240 240 ALA ALA B . B 2 241 LYS 241 241 LYS LYS B . B 2 242 LYS 242 242 LYS LYS B . B 2 243 ALA 243 243 ALA ALA B . B 2 244 ALA 244 244 ALA ALA B . B 2 245 GLU 245 245 GLU GLU B . B 2 246 THR 246 246 THR THR B . B 2 247 MET 247 247 MET MET B . B 2 248 LYS 248 248 LYS LYS B . B 2 249 ILE 249 249 ILE ILE B . B 2 250 THR 250 250 THR THR B . B 2 251 ALA 251 251 ALA ALA B . B 2 252 PRO 252 252 PRO PRO B . B 2 253 ASP 253 253 ASP ASP B . B 2 254 LEU 254 254 LEU LEU B . B 2 255 LYS 255 255 LYS LYS B . B 2 256 GLU 256 256 GLU GLU B . B 2 257 LEU 257 257 LEU LEU B . B 2 258 GLY 258 258 GLY GLY B . B 2 259 ILE 259 259 ILE ILE B . B 2 260 ILE 260 260 ILE ILE B . B 2 261 ASP 261 261 ASP ASP B . B 2 262 HIS 262 262 HIS HIS B . B 2 263 MET 263 263 MET MET B . B 2 264 ILE 264 264 ILE ILE B . B 2 265 LYS 265 265 LYS LYS B . B 2 266 GLU 266 266 GLU GLU B . B 2 267 VAL 267 267 VAL VAL B . B 2 268 LYS 268 268 LYS LYS B . B 2 269 GLY 269 269 GLY GLY B . B 2 270 GLY 270 270 GLY GLY B . B 2 271 ALA 271 271 ALA ALA B . B 2 272 HIS 272 272 HIS HIS B . B 2 273 HIS 273 273 HIS HIS B . B 2 274 ASP 274 274 ASP ASP B . B 2 275 VAL 275 275 VAL VAL B . B 2 276 LYS 276 276 LYS LYS B . B 2 277 LEU 277 277 LEU LEU B . B 2 278 GLN 278 278 GLN GLN B . B 2 279 ALA 279 279 ALA ALA B . B 2 280 SER 280 280 SER SER B . B 2 281 TYR 281 281 TYR TYR B . B 2 282 MET 282 282 MET MET B . B 2 283 ASP 283 283 ASP ASP B . B 2 284 GLU 284 284 GLU GLU B . B 2 285 THR 285 285 THR THR B . B 2 286 LEU 286 286 LEU LEU B . B 2 287 LYS 287 287 LYS LYS B . B 2 288 GLN 288 288 GLN GLN B . B 2 289 SER 289 289 SER SER B . B 2 290 LEU 290 290 LEU LEU B . B 2 291 LYS 291 291 LYS LYS B . B 2 292 THR 292 292 THR THR B . B 2 293 LEU 293 293 LEU LEU B . B 2 294 LEU 294 294 LEU LEU B . B 2 295 LYS 295 295 LYS LYS B . B 2 296 LEU 296 296 LEU LEU B . B 2 297 SER 297 297 SER SER B . B 2 298 GLU 298 298 GLU GLU B . B 2 299 GLU 299 299 GLU GLU B . B 2 300 GLU 300 300 GLU GLU B . B 2 301 LEU 301 301 LEU LEU B . B 2 302 VAL 302 302 VAL VAL B . B 2 303 GLN 303 303 GLN GLN B . B 2 304 GLN 304 304 GLN GLN B . B 2 305 ARG 305 305 ARG ARG B . B 2 306 TYR 306 306 TYR TYR B . B 2 307 GLU 307 307 GLU GLU B . B 2 308 LYS 308 308 LYS LYS B . B 2 309 TYR 309 309 TYR TYR B . B 2 310 LYS 310 310 LYS LYS B . B 2 311 ALA 311 311 ALA ALA B . B 2 312 ILE 312 312 ILE ILE B . B 2 313 GLY 313 313 GLY GLY B . B 2 314 LYS 314 314 LYS LYS B . B 2 315 VAL 315 315 VAL VAL B . B 2 316 SER 316 316 SER SER B . B 2 317 VAL 317 317 VAL VAL B . B 2 318 GLU 318 318 GLU GLU B . B 2 319 ASP 319 319 ASP ASP B . B 2 320 GLN 320 320 GLN GLN B . B 2 321 TYR 321 321 TYR TYR B . B 2 322 ILE 322 322 ILE ILE B . B 2 323 GLY 323 323 GLY GLY B . B 2 324 VAL 324 324 VAL VAL B . B 2 325 ASN 325 325 ASN ASN B . # # loop_ # #