data_9A5R # _entry.id 9A5R # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A5R _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A5R pdb_00009a5r 10.2210/pdb9a5r/pdb PDB-Dev PDBDEV_00000284 PDBDEV_00000284 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A5R # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 45696.797 1 YTOP_BACSU 1 MAN POLYMER . 45751.883 2 YSDC_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPANDMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIHTNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPANDMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIHTNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM . A polypeptide(L) 2 . NO NO MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDRKTVDEITYQ MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDRKTVDEITYQ . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . ASN 2 1 . GLN 3 1 . GLU 4 1 . THR 5 1 . LYS 6 1 . ALA 7 1 . LEU 8 1 . PHE 9 1 . GLN 10 1 . THR 11 1 . LEU 12 1 . THR 13 1 . GLN 14 1 . LEU 15 1 . PRO 16 1 . GLY 17 1 . ALA 18 1 . PRO 19 1 . GLY 20 1 . ASN 21 1 . GLU 22 1 . HIS 23 1 . GLN 24 1 . VAL 25 1 . ARG 26 1 . ALA 27 1 . PHE 28 1 . MET 29 1 . LYS 30 1 . GLN 31 1 . GLU 32 1 . LEU 33 1 . ALA 34 1 . LYS 35 1 . TYR 36 1 . ALA 37 1 . ASP 38 1 . ASP 39 1 . ILE 40 1 . VAL 41 1 . GLN 42 1 . ASP 43 1 . ARG 44 1 . LEU 45 1 . GLY 46 1 . SER 47 1 . VAL 48 1 . PHE 49 1 . GLY 50 1 . VAL 51 1 . ARG 52 1 . ARG 53 1 . GLY 54 1 . ALA 55 1 . GLU 56 1 . ASP 57 1 . ALA 58 1 . PRO 59 1 . ARG 60 1 . ILE 61 1 . MET 62 1 . VAL 63 1 . ALA 64 1 . GLY 65 1 . HIS 66 1 . MET 67 1 . ASP 68 1 . GLU 69 1 . VAL 70 1 . GLY 71 1 . PHE 72 1 . MET 73 1 . VAL 74 1 . THR 75 1 . SER 76 1 . ILE 77 1 . THR 78 1 . ASP 79 1 . ASN 80 1 . GLY 81 1 . LEU 82 1 . LEU 83 1 . ARG 84 1 . PHE 85 1 . GLN 86 1 . THR 87 1 . LEU 88 1 . GLY 89 1 . GLY 90 1 . TRP 91 1 . TRP 92 1 . SER 93 1 . GLN 94 1 . VAL 95 1 . LEU 96 1 . LEU 97 1 . ALA 98 1 . GLN 99 1 . ARG 100 1 . VAL 101 1 . GLU 102 1 . ILE 103 1 . GLN 104 1 . THR 105 1 . ASP 106 1 . ASN 107 1 . GLY 108 1 . PRO 109 1 . VAL 110 1 . PRO 111 1 . GLY 112 1 . VAL 113 1 . ILE 114 1 . SER 115 1 . SER 116 1 . ILE 117 1 . PRO 118 1 . PRO 119 1 . HIS 120 1 . LEU 121 1 . LEU 122 1 . THR 123 1 . ASP 124 1 . ALA 125 1 . GLN 126 1 . ARG 127 1 . ASN 128 1 . ARG 129 1 . PRO 130 1 . MET 131 1 . ASP 132 1 . ILE 133 1 . LYS 134 1 . ASN 135 1 . MET 136 1 . MET 137 1 . ILE 138 1 . ASP 139 1 . ILE 140 1 . GLY 141 1 . ALA 142 1 . ASP 143 1 . ASP 144 1 . LYS 145 1 . GLU 146 1 . ASP 147 1 . ALA 148 1 . ILE 149 1 . LYS 150 1 . ILE 151 1 . GLY 152 1 . ILE 153 1 . ARG 154 1 . PRO 155 1 . GLY 156 1 . GLN 157 1 . GLN 158 1 . ILE 159 1 . VAL 160 1 . PRO 161 1 . VAL 162 1 . CYS 163 1 . PRO 164 1 . PHE 165 1 . THR 166 1 . THR 167 1 . MET 168 1 . ALA 169 1 . ASN 170 1 . GLU 171 1 . LYS 172 1 . LYS 173 1 . ILE 174 1 . LEU 175 1 . SER 176 1 . LYS 177 1 . ALA 178 1 . TRP 179 1 . ASP 180 1 . ASN 181 1 . ARG 182 1 . TYR 183 1 . GLY 184 1 . CYS 185 1 . GLY 186 1 . LEU 187 1 . SER 188 1 . ILE 189 1 . GLU 190 1 . LEU 191 1 . LEU 192 1 . LYS 193 1 . GLU 194 1 . LEU 195 1 . HIS 196 1 . GLY 197 1 . LYS 198 1 . GLU 199 1 . LEU 200 1 . PRO 201 1 . ASN 202 1 . THR 203 1 . LEU 204 1 . TYR 205 1 . ALA 206 1 . GLY 207 1 . ALA 208 1 . THR 209 1 . VAL 210 1 . GLN 211 1 . GLU 212 1 . GLU 213 1 . VAL 214 1 . GLY 215 1 . LEU 216 1 . ARG 217 1 . GLY 218 1 . ALA 219 1 . GLN 220 1 . THR 221 1 . ALA 222 1 . SER 223 1 . HIS 224 1 . MET 225 1 . ILE 226 1 . LYS 227 1 . PRO 228 1 . ASP 229 1 . LEU 230 1 . PHE 231 1 . PHE 232 1 . ALA 233 1 . LEU 234 1 . ASP 235 1 . ALA 236 1 . SER 237 1 . PRO 238 1 . ALA 239 1 . ASN 240 1 . ASP 241 1 . MET 242 1 . SER 243 1 . GLY 244 1 . ASP 245 1 . LYS 246 1 . ASN 247 1 . GLU 248 1 . PHE 249 1 . GLY 250 1 . GLN 251 1 . LEU 252 1 . GLY 253 1 . LYS 254 1 . GLY 255 1 . PHE 256 1 . LEU 257 1 . LEU 258 1 . ARG 259 1 . ILE 260 1 . LEU 261 1 . ASP 262 1 . ARG 263 1 . THR 264 1 . THR 265 1 . VAL 266 1 . MET 267 1 . HIS 268 1 . ARG 269 1 . GLY 270 1 . MET 271 1 . ARG 272 1 . GLU 273 1 . PHE 274 1 . VAL 275 1 . LEU 276 1 . ASP 277 1 . MET 278 1 . ALA 279 1 . GLU 280 1 . THR 281 1 . HIS 282 1 . ASP 283 1 . ILE 284 1 . PRO 285 1 . TYR 286 1 . GLN 287 1 . TYR 288 1 . PHE 289 1 . VAL 290 1 . SER 291 1 . GLY 292 1 . GLY 293 1 . GLY 294 1 . THR 295 1 . ASP 296 1 . ALA 297 1 . GLY 298 1 . LYS 299 1 . VAL 300 1 . HIS 301 1 . ILE 302 1 . SER 303 1 . ASN 304 1 . SER 305 1 . GLY 306 1 . VAL 307 1 . PRO 308 1 . SER 309 1 . ALA 310 1 . VAL 311 1 . ILE 312 1 . GLY 313 1 . ILE 314 1 . CYS 315 1 . SER 316 1 . ARG 317 1 . TYR 318 1 . ILE 319 1 . HIS 320 1 . THR 321 1 . ASN 322 1 . ALA 323 1 . THR 324 1 . ILE 325 1 . ILE 326 1 . HIS 327 1 . ILE 328 1 . ASP 329 1 . ASP 330 1 . TYR 331 1 . ALA 332 1 . ALA 333 1 . ALA 334 1 . LYS 335 1 . GLU 336 1 . MET 337 1 . LEU 338 1 . ILE 339 1 . LYS 340 1 . LEU 341 1 . VAL 342 1 . THR 343 1 . ALA 344 1 . CYS 345 1 . ASP 346 1 . LYS 347 1 . GLN 348 1 . THR 349 1 . VAL 350 1 . ASP 351 1 . ALA 352 1 . ILE 353 1 . LYS 354 1 . GLU 355 1 . ASN 356 1 . MET 357 2 . MET 1 2 . ALA 2 2 . LYS 3 2 . LEU 4 2 . ASP 5 2 . GLU 6 2 . THR 7 2 . LEU 8 2 . THR 9 2 . MET 10 2 . LEU 11 2 . LYS 12 2 . ASP 13 2 . LEU 14 2 . THR 15 2 . ASP 16 2 . ALA 17 2 . LYS 18 2 . GLY 19 2 . ILE 20 2 . PRO 21 2 . GLY 22 2 . ASN 23 2 . GLU 24 2 . ARG 25 2 . GLU 26 2 . VAL 27 2 . ARG 28 2 . GLN 29 2 . VAL 30 2 . MET 31 2 . LYS 32 2 . SER 33 2 . TYR 34 2 . ILE 35 2 . GLU 36 2 . PRO 37 2 . PHE 38 2 . ALA 39 2 . ASP 40 2 . GLU 41 2 . VAL 42 2 . THR 43 2 . THR 44 2 . ASP 45 2 . ARG 46 2 . LEU 47 2 . GLY 48 2 . SER 49 2 . LEU 50 2 . ILE 51 2 . ALA 52 2 . LYS 53 2 . LYS 54 2 . THR 55 2 . GLY 56 2 . ALA 57 2 . GLU 58 2 . ASN 59 2 . GLY 60 2 . PRO 61 2 . LYS 62 2 . ILE 63 2 . MET 64 2 . ILE 65 2 . ALA 66 2 . GLY 67 2 . HIS 68 2 . LEU 69 2 . ASP 70 2 . GLU 71 2 . VAL 72 2 . GLY 73 2 . PHE 74 2 . MET 75 2 . VAL 76 2 . THR 77 2 . GLN 78 2 . ILE 79 2 . THR 80 2 . ASP 81 2 . LYS 82 2 . GLY 83 2 . PHE 84 2 . ILE 85 2 . ARG 86 2 . PHE 87 2 . GLN 88 2 . THR 89 2 . VAL 90 2 . GLY 91 2 . GLY 92 2 . TRP 93 2 . TRP 94 2 . ALA 95 2 . GLN 96 2 . VAL 97 2 . MET 98 2 . LEU 99 2 . ALA 100 2 . GLN 101 2 . ARG 102 2 . VAL 103 2 . THR 104 2 . ILE 105 2 . VAL 106 2 . THR 107 2 . LYS 108 2 . LYS 109 2 . GLY 110 2 . GLU 111 2 . ILE 112 2 . THR 113 2 . GLY 114 2 . VAL 115 2 . ILE 116 2 . GLY 117 2 . SER 118 2 . LYS 119 2 . PRO 120 2 . PRO 121 2 . HIS 122 2 . ILE 123 2 . LEU 124 2 . SER 125 2 . PRO 126 2 . GLU 127 2 . ALA 128 2 . ARG 129 2 . LYS 130 2 . LYS 131 2 . SER 132 2 . VAL 133 2 . GLU 134 2 . ILE 135 2 . LYS 136 2 . ASP 137 2 . MET 138 2 . PHE 139 2 . ILE 140 2 . ASP 141 2 . ILE 142 2 . GLY 143 2 . ALA 144 2 . SER 145 2 . SER 146 2 . ARG 147 2 . GLU 148 2 . GLU 149 2 . ALA 150 2 . LEU 151 2 . GLU 152 2 . TRP 153 2 . GLY 154 2 . VAL 155 2 . LEU 156 2 . PRO 157 2 . GLY 158 2 . ASP 159 2 . MET 160 2 . ILE 161 2 . VAL 162 2 . PRO 163 2 . HIS 164 2 . PHE 165 2 . GLU 166 2 . PHE 167 2 . THR 168 2 . VAL 169 2 . MET 170 2 . ASN 171 2 . ASN 172 2 . GLU 173 2 . LYS 174 2 . PHE 175 2 . LEU 176 2 . LEU 177 2 . ALA 178 2 . LYS 179 2 . ALA 180 2 . TRP 181 2 . ASP 182 2 . ASN 183 2 . ARG 184 2 . ILE 185 2 . GLY 186 2 . CYS 187 2 . ALA 188 2 . ILE 189 2 . ALA 190 2 . ILE 191 2 . ASP 192 2 . VAL 193 2 . LEU 194 2 . ARG 195 2 . ASN 196 2 . LEU 197 2 . GLN 198 2 . ASN 199 2 . THR 200 2 . ASP 201 2 . HIS 202 2 . PRO 203 2 . ASN 204 2 . ILE 205 2 . VAL 206 2 . TYR 207 2 . GLY 208 2 . VAL 209 2 . GLY 210 2 . THR 211 2 . VAL 212 2 . GLN 213 2 . GLU 214 2 . GLU 215 2 . VAL 216 2 . GLY 217 2 . LEU 218 2 . ARG 219 2 . GLY 220 2 . ALA 221 2 . LYS 222 2 . THR 223 2 . ALA 224 2 . ALA 225 2 . HIS 226 2 . THR 227 2 . ILE 228 2 . GLN 229 2 . PRO 230 2 . ASP 231 2 . ILE 232 2 . ALA 233 2 . PHE 234 2 . GLY 235 2 . VAL 236 2 . ASP 237 2 . VAL 238 2 . GLY 239 2 . ILE 240 2 . ALA 241 2 . GLY 242 2 . ASP 243 2 . THR 244 2 . PRO 245 2 . GLY 246 2 . ILE 247 2 . SER 248 2 . GLU 249 2 . LYS 250 2 . GLU 251 2 . ALA 252 2 . GLN 253 2 . SER 254 2 . LYS 255 2 . MET 256 2 . GLY 257 2 . LYS 258 2 . GLY 259 2 . PRO 260 2 . GLN 261 2 . ILE 262 2 . ILE 263 2 . VAL 264 2 . TYR 265 2 . ASP 266 2 . ALA 267 2 . SER 268 2 . MET 269 2 . VAL 270 2 . SER 271 2 . HIS 272 2 . LYS 273 2 . GLY 274 2 . LEU 275 2 . ARG 276 2 . ASP 277 2 . ALA 278 2 . VAL 279 2 . VAL 280 2 . ALA 281 2 . THR 282 2 . ALA 283 2 . GLU 284 2 . GLU 285 2 . ALA 286 2 . GLY 287 2 . ILE 288 2 . PRO 289 2 . TYR 290 2 . GLN 291 2 . PHE 292 2 . ASP 293 2 . ALA 294 2 . ILE 295 2 . ALA 296 2 . GLY 297 2 . GLY 298 2 . GLY 299 2 . THR 300 2 . ASP 301 2 . SER 302 2 . GLY 303 2 . ALA 304 2 . ILE 305 2 . HIS 306 2 . LEU 307 2 . THR 308 2 . ALA 309 2 . ASN 310 2 . GLY 311 2 . VAL 312 2 . PRO 313 2 . ALA 314 2 . LEU 315 2 . SER 316 2 . ILE 317 2 . THR 318 2 . ILE 319 2 . ALA 320 2 . THR 321 2 . ARG 322 2 . TYR 323 2 . ILE 324 2 . HIS 325 2 . THR 326 2 . HIS 327 2 . ALA 328 2 . ALA 329 2 . MET 330 2 . LEU 331 2 . HIS 332 2 . ARG 333 2 . ASP 334 2 . ASP 335 2 . TYR 336 2 . GLU 337 2 . ASN 338 2 . ALA 339 2 . VAL 340 2 . LYS 341 2 . LEU 342 2 . ILE 343 2 . THR 344 2 . GLU 345 2 . VAL 346 2 . ILE 347 2 . LYS 348 2 . LYS 349 2 . LEU 350 2 . ASP 351 2 . ARG 352 2 . LYS 353 2 . THR 354 2 . VAL 355 2 . ASP 356 2 . GLU 357 2 . ILE 358 2 . THR 359 2 . TYR 360 2 . GLN 361 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # _ihm_cross_link_list.comp_id_1 LYS _ihm_cross_link_list.comp_id_2 LYS _ihm_cross_link_list.dataset_list_id 1 _ihm_cross_link_list.details . _ihm_cross_link_list.entity_description_1 YTOP_BACSU _ihm_cross_link_list.entity_description_2 YSDC_BACSU _ihm_cross_link_list.entity_id_1 1 _ihm_cross_link_list.entity_id_2 2 _ihm_cross_link_list.group_id 1 _ihm_cross_link_list.id 1 _ihm_cross_link_list.linker_chem_comp_descriptor_id 1 _ihm_cross_link_list.linker_type SDA _ihm_cross_link_list.seq_id_1 145 _ihm_cross_link_list.seq_id_2 258 # _ihm_cross_link_restraint.asym_id_1 A _ihm_cross_link_restraint.asym_id_2 B _ihm_cross_link_restraint.atom_id_1 . _ihm_cross_link_restraint.atom_id_2 . _ihm_cross_link_restraint.comp_id_1 LYS _ihm_cross_link_restraint.comp_id_2 LYS _ihm_cross_link_restraint.conditional_crosslink_flag . _ihm_cross_link_restraint.distance_threshold 25 _ihm_cross_link_restraint.entity_id_1 1 _ihm_cross_link_restraint.entity_id_2 2 _ihm_cross_link_restraint.group_id 1 _ihm_cross_link_restraint.id 1 _ihm_cross_link_restraint.model_granularity by-residue _ihm_cross_link_restraint.pseudo_site_flag NO _ihm_cross_link_restraint.psi 0.95 _ihm_cross_link_restraint.restraint_type "upper bound" _ihm_cross_link_restraint.seq_id_1 145 _ihm_cross_link_restraint.seq_id_2 258 _ihm_cross_link_restraint.sigma_1 . _ihm_cross_link_restraint.sigma_2 . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET MET 1 1 1 357 MET GLN 2 2 1 361 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A YTOP_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B YSDC_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of YTOP-YSDC by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name YTOP-YSDC # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A YTOP_BACSU 1 1 1 1 1 B YSDC_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A5R _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of YTOP-YSDC by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type YTOP_BACSU 1 A . . . . . . YSDC_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . O34924 . MNQETKALFQTLTQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGCGLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPANDMSGDKNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAVIGICSRYIHTNATIIHIDDYAAAKEMLIKLVTACDKQTVDAIKENM B UNP . 2 2 1 . P94521 . MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDRKTVDEITYQ # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 357 1 1 357 2 1 361 2 1 361 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 ASN 2 2 ASN ASN A . A 1 3 GLN 3 3 GLN GLN A . A 1 4 GLU 4 4 GLU GLU A . A 1 5 THR 5 5 THR THR A . A 1 6 LYS 6 6 LYS LYS A . A 1 7 ALA 7 7 ALA ALA A . A 1 8 LEU 8 8 LEU LEU A . A 1 9 PHE 9 9 PHE PHE A . A 1 10 GLN 10 10 GLN GLN A . A 1 11 THR 11 11 THR THR A . A 1 12 LEU 12 12 LEU LEU A . A 1 13 THR 13 13 THR THR A . A 1 14 GLN 14 14 GLN GLN A . A 1 15 LEU 15 15 LEU LEU A . A 1 16 PRO 16 16 PRO PRO A . A 1 17 GLY 17 17 GLY GLY A . A 1 18 ALA 18 18 ALA ALA A . A 1 19 PRO 19 19 PRO PRO A . A 1 20 GLY 20 20 GLY GLY A . A 1 21 ASN 21 21 ASN ASN A . A 1 22 GLU 22 22 GLU GLU A . A 1 23 HIS 23 23 HIS HIS A . A 1 24 GLN 24 24 GLN GLN A . A 1 25 VAL 25 25 VAL VAL A . A 1 26 ARG 26 26 ARG ARG A . A 1 27 ALA 27 27 ALA ALA A . A 1 28 PHE 28 28 PHE PHE A . A 1 29 MET 29 29 MET MET A . A 1 30 LYS 30 30 LYS LYS A . A 1 31 GLN 31 31 GLN GLN A . A 1 32 GLU 32 32 GLU GLU A . A 1 33 LEU 33 33 LEU LEU A . A 1 34 ALA 34 34 ALA ALA A . A 1 35 LYS 35 35 LYS LYS A . A 1 36 TYR 36 36 TYR TYR A . A 1 37 ALA 37 37 ALA ALA A . A 1 38 ASP 38 38 ASP ASP A . A 1 39 ASP 39 39 ASP ASP A . A 1 40 ILE 40 40 ILE ILE A . A 1 41 VAL 41 41 VAL VAL A . A 1 42 GLN 42 42 GLN GLN A . A 1 43 ASP 43 43 ASP ASP A . A 1 44 ARG 44 44 ARG ARG A . A 1 45 LEU 45 45 LEU LEU A . A 1 46 GLY 46 46 GLY GLY A . A 1 47 SER 47 47 SER SER A . A 1 48 VAL 48 48 VAL VAL A . A 1 49 PHE 49 49 PHE PHE A . A 1 50 GLY 50 50 GLY GLY A . A 1 51 VAL 51 51 VAL VAL A . A 1 52 ARG 52 52 ARG ARG A . A 1 53 ARG 53 53 ARG ARG A . A 1 54 GLY 54 54 GLY GLY A . A 1 55 ALA 55 55 ALA ALA A . A 1 56 GLU 56 56 GLU GLU A . A 1 57 ASP 57 57 ASP ASP A . A 1 58 ALA 58 58 ALA ALA A . A 1 59 PRO 59 59 PRO PRO A . A 1 60 ARG 60 60 ARG ARG A . A 1 61 ILE 61 61 ILE ILE A . A 1 62 MET 62 62 MET MET A . A 1 63 VAL 63 63 VAL VAL A . A 1 64 ALA 64 64 ALA ALA A . A 1 65 GLY 65 65 GLY GLY A . A 1 66 HIS 66 66 HIS HIS A . A 1 67 MET 67 67 MET MET A . A 1 68 ASP 68 68 ASP ASP A . A 1 69 GLU 69 69 GLU GLU A . A 1 70 VAL 70 70 VAL VAL A . A 1 71 GLY 71 71 GLY GLY A . A 1 72 PHE 72 72 PHE PHE A . A 1 73 MET 73 73 MET MET A . A 1 74 VAL 74 74 VAL VAL A . A 1 75 THR 75 75 THR THR A . A 1 76 SER 76 76 SER SER A . A 1 77 ILE 77 77 ILE ILE A . A 1 78 THR 78 78 THR THR A . A 1 79 ASP 79 79 ASP ASP A . A 1 80 ASN 80 80 ASN ASN A . A 1 81 GLY 81 81 GLY GLY A . A 1 82 LEU 82 82 LEU LEU A . A 1 83 LEU 83 83 LEU LEU A . A 1 84 ARG 84 84 ARG ARG A . A 1 85 PHE 85 85 PHE PHE A . A 1 86 GLN 86 86 GLN GLN A . A 1 87 THR 87 87 THR THR A . A 1 88 LEU 88 88 LEU LEU A . A 1 89 GLY 89 89 GLY GLY A . A 1 90 GLY 90 90 GLY GLY A . A 1 91 TRP 91 91 TRP TRP A . A 1 92 TRP 92 92 TRP TRP A . A 1 93 SER 93 93 SER SER A . A 1 94 GLN 94 94 GLN GLN A . A 1 95 VAL 95 95 VAL VAL A . A 1 96 LEU 96 96 LEU LEU A . A 1 97 LEU 97 97 LEU LEU A . A 1 98 ALA 98 98 ALA ALA A . A 1 99 GLN 99 99 GLN GLN A . A 1 100 ARG 100 100 ARG ARG A . A 1 101 VAL 101 101 VAL VAL A . A 1 102 GLU 102 102 GLU GLU A . A 1 103 ILE 103 103 ILE ILE A . A 1 104 GLN 104 104 GLN GLN A . A 1 105 THR 105 105 THR THR A . A 1 106 ASP 106 106 ASP ASP A . A 1 107 ASN 107 107 ASN ASN A . A 1 108 GLY 108 108 GLY GLY A . A 1 109 PRO 109 109 PRO PRO A . A 1 110 VAL 110 110 VAL VAL A . A 1 111 PRO 111 111 PRO PRO A . A 1 112 GLY 112 112 GLY GLY A . A 1 113 VAL 113 113 VAL VAL A . A 1 114 ILE 114 114 ILE ILE A . A 1 115 SER 115 115 SER SER A . A 1 116 SER 116 116 SER SER A . A 1 117 ILE 117 117 ILE ILE A . A 1 118 PRO 118 118 PRO PRO A . A 1 119 PRO 119 119 PRO PRO A . A 1 120 HIS 120 120 HIS HIS A . A 1 121 LEU 121 121 LEU LEU A . A 1 122 LEU 122 122 LEU LEU A . A 1 123 THR 123 123 THR THR A . A 1 124 ASP 124 124 ASP ASP A . A 1 125 ALA 125 125 ALA ALA A . A 1 126 GLN 126 126 GLN GLN A . A 1 127 ARG 127 127 ARG ARG A . A 1 128 ASN 128 128 ASN ASN A . A 1 129 ARG 129 129 ARG ARG A . A 1 130 PRO 130 130 PRO PRO A . A 1 131 MET 131 131 MET MET A . A 1 132 ASP 132 132 ASP ASP A . A 1 133 ILE 133 133 ILE ILE A . A 1 134 LYS 134 134 LYS LYS A . A 1 135 ASN 135 135 ASN ASN A . A 1 136 MET 136 136 MET MET A . A 1 137 MET 137 137 MET MET A . A 1 138 ILE 138 138 ILE ILE A . A 1 139 ASP 139 139 ASP ASP A . A 1 140 ILE 140 140 ILE ILE A . A 1 141 GLY 141 141 GLY GLY A . A 1 142 ALA 142 142 ALA ALA A . A 1 143 ASP 143 143 ASP ASP A . A 1 144 ASP 144 144 ASP ASP A . A 1 145 LYS 145 145 LYS LYS A . A 1 146 GLU 146 146 GLU GLU A . A 1 147 ASP 147 147 ASP ASP A . A 1 148 ALA 148 148 ALA ALA A . A 1 149 ILE 149 149 ILE ILE A . A 1 150 LYS 150 150 LYS LYS A . A 1 151 ILE 151 151 ILE ILE A . A 1 152 GLY 152 152 GLY GLY A . A 1 153 ILE 153 153 ILE ILE A . A 1 154 ARG 154 154 ARG ARG A . A 1 155 PRO 155 155 PRO PRO A . A 1 156 GLY 156 156 GLY GLY A . A 1 157 GLN 157 157 GLN GLN A . A 1 158 GLN 158 158 GLN GLN A . A 1 159 ILE 159 159 ILE ILE A . A 1 160 VAL 160 160 VAL VAL A . A 1 161 PRO 161 161 PRO PRO A . A 1 162 VAL 162 162 VAL VAL A . A 1 163 CYS 163 163 CYS CYS A . A 1 164 PRO 164 164 PRO PRO A . A 1 165 PHE 165 165 PHE PHE A . A 1 166 THR 166 166 THR THR A . A 1 167 THR 167 167 THR THR A . A 1 168 MET 168 168 MET MET A . A 1 169 ALA 169 169 ALA ALA A . A 1 170 ASN 170 170 ASN ASN A . A 1 171 GLU 171 171 GLU GLU A . A 1 172 LYS 172 172 LYS LYS A . A 1 173 LYS 173 173 LYS LYS A . A 1 174 ILE 174 174 ILE ILE A . A 1 175 LEU 175 175 LEU LEU A . A 1 176 SER 176 176 SER SER A . A 1 177 LYS 177 177 LYS LYS A . A 1 178 ALA 178 178 ALA ALA A . A 1 179 TRP 179 179 TRP TRP A . A 1 180 ASP 180 180 ASP ASP A . A 1 181 ASN 181 181 ASN ASN A . A 1 182 ARG 182 182 ARG ARG A . A 1 183 TYR 183 183 TYR TYR A . A 1 184 GLY 184 184 GLY GLY A . A 1 185 CYS 185 185 CYS CYS A . A 1 186 GLY 186 186 GLY GLY A . A 1 187 LEU 187 187 LEU LEU A . A 1 188 SER 188 188 SER SER A . A 1 189 ILE 189 189 ILE ILE A . A 1 190 GLU 190 190 GLU GLU A . A 1 191 LEU 191 191 LEU LEU A . A 1 192 LEU 192 192 LEU LEU A . A 1 193 LYS 193 193 LYS LYS A . A 1 194 GLU 194 194 GLU GLU A . A 1 195 LEU 195 195 LEU LEU A . A 1 196 HIS 196 196 HIS HIS A . A 1 197 GLY 197 197 GLY GLY A . A 1 198 LYS 198 198 LYS LYS A . A 1 199 GLU 199 199 GLU GLU A . A 1 200 LEU 200 200 LEU LEU A . A 1 201 PRO 201 201 PRO PRO A . A 1 202 ASN 202 202 ASN ASN A . A 1 203 THR 203 203 THR THR A . A 1 204 LEU 204 204 LEU LEU A . A 1 205 TYR 205 205 TYR TYR A . A 1 206 ALA 206 206 ALA ALA A . A 1 207 GLY 207 207 GLY GLY A . A 1 208 ALA 208 208 ALA ALA A . A 1 209 THR 209 209 THR THR A . A 1 210 VAL 210 210 VAL VAL A . A 1 211 GLN 211 211 GLN GLN A . A 1 212 GLU 212 212 GLU GLU A . A 1 213 GLU 213 213 GLU GLU A . A 1 214 VAL 214 214 VAL VAL A . A 1 215 GLY 215 215 GLY GLY A . A 1 216 LEU 216 216 LEU LEU A . A 1 217 ARG 217 217 ARG ARG A . A 1 218 GLY 218 218 GLY GLY A . A 1 219 ALA 219 219 ALA ALA A . A 1 220 GLN 220 220 GLN GLN A . A 1 221 THR 221 221 THR THR A . A 1 222 ALA 222 222 ALA ALA A . A 1 223 SER 223 223 SER SER A . A 1 224 HIS 224 224 HIS HIS A . A 1 225 MET 225 225 MET MET A . A 1 226 ILE 226 226 ILE ILE A . A 1 227 LYS 227 227 LYS LYS A . A 1 228 PRO 228 228 PRO PRO A . A 1 229 ASP 229 229 ASP ASP A . A 1 230 LEU 230 230 LEU LEU A . A 1 231 PHE 231 231 PHE PHE A . A 1 232 PHE 232 232 PHE PHE A . A 1 233 ALA 233 233 ALA ALA A . A 1 234 LEU 234 234 LEU LEU A . A 1 235 ASP 235 235 ASP ASP A . A 1 236 ALA 236 236 ALA ALA A . A 1 237 SER 237 237 SER SER A . A 1 238 PRO 238 238 PRO PRO A . A 1 239 ALA 239 239 ALA ALA A . A 1 240 ASN 240 240 ASN ASN A . A 1 241 ASP 241 241 ASP ASP A . A 1 242 MET 242 242 MET MET A . A 1 243 SER 243 243 SER SER A . A 1 244 GLY 244 244 GLY GLY A . A 1 245 ASP 245 245 ASP ASP A . A 1 246 LYS 246 246 LYS LYS A . A 1 247 ASN 247 247 ASN ASN A . A 1 248 GLU 248 248 GLU GLU A . A 1 249 PHE 249 249 PHE PHE A . A 1 250 GLY 250 250 GLY GLY A . A 1 251 GLN 251 251 GLN GLN A . A 1 252 LEU 252 252 LEU LEU A . A 1 253 GLY 253 253 GLY GLY A . A 1 254 LYS 254 254 LYS LYS A . A 1 255 GLY 255 255 GLY GLY A . A 1 256 PHE 256 256 PHE PHE A . A 1 257 LEU 257 257 LEU LEU A . A 1 258 LEU 258 258 LEU LEU A . A 1 259 ARG 259 259 ARG ARG A . A 1 260 ILE 260 260 ILE ILE A . A 1 261 LEU 261 261 LEU LEU A . A 1 262 ASP 262 262 ASP ASP A . A 1 263 ARG 263 263 ARG ARG A . A 1 264 THR 264 264 THR THR A . A 1 265 THR 265 265 THR THR A . A 1 266 VAL 266 266 VAL VAL A . A 1 267 MET 267 267 MET MET A . A 1 268 HIS 268 268 HIS HIS A . A 1 269 ARG 269 269 ARG ARG A . A 1 270 GLY 270 270 GLY GLY A . A 1 271 MET 271 271 MET MET A . A 1 272 ARG 272 272 ARG ARG A . A 1 273 GLU 273 273 GLU GLU A . A 1 274 PHE 274 274 PHE PHE A . A 1 275 VAL 275 275 VAL VAL A . A 1 276 LEU 276 276 LEU LEU A . A 1 277 ASP 277 277 ASP ASP A . A 1 278 MET 278 278 MET MET A . A 1 279 ALA 279 279 ALA ALA A . A 1 280 GLU 280 280 GLU GLU A . A 1 281 THR 281 281 THR THR A . A 1 282 HIS 282 282 HIS HIS A . A 1 283 ASP 283 283 ASP ASP A . A 1 284 ILE 284 284 ILE ILE A . A 1 285 PRO 285 285 PRO PRO A . A 1 286 TYR 286 286 TYR TYR A . A 1 287 GLN 287 287 GLN GLN A . A 1 288 TYR 288 288 TYR TYR A . A 1 289 PHE 289 289 PHE PHE A . A 1 290 VAL 290 290 VAL VAL A . A 1 291 SER 291 291 SER SER A . A 1 292 GLY 292 292 GLY GLY A . A 1 293 GLY 293 293 GLY GLY A . A 1 294 GLY 294 294 GLY GLY A . A 1 295 THR 295 295 THR THR A . A 1 296 ASP 296 296 ASP ASP A . A 1 297 ALA 297 297 ALA ALA A . A 1 298 GLY 298 298 GLY GLY A . A 1 299 LYS 299 299 LYS LYS A . A 1 300 VAL 300 300 VAL VAL A . A 1 301 HIS 301 301 HIS HIS A . A 1 302 ILE 302 302 ILE ILE A . A 1 303 SER 303 303 SER SER A . A 1 304 ASN 304 304 ASN ASN A . A 1 305 SER 305 305 SER SER A . A 1 306 GLY 306 306 GLY GLY A . A 1 307 VAL 307 307 VAL VAL A . A 1 308 PRO 308 308 PRO PRO A . A 1 309 SER 309 309 SER SER A . A 1 310 ALA 310 310 ALA ALA A . A 1 311 VAL 311 311 VAL VAL A . A 1 312 ILE 312 312 ILE ILE A . A 1 313 GLY 313 313 GLY GLY A . A 1 314 ILE 314 314 ILE ILE A . A 1 315 CYS 315 315 CYS CYS A . A 1 316 SER 316 316 SER SER A . A 1 317 ARG 317 317 ARG ARG A . A 1 318 TYR 318 318 TYR TYR A . A 1 319 ILE 319 319 ILE ILE A . A 1 320 HIS 320 320 HIS HIS A . A 1 321 THR 321 321 THR THR A . A 1 322 ASN 322 322 ASN ASN A . A 1 323 ALA 323 323 ALA ALA A . A 1 324 THR 324 324 THR THR A . A 1 325 ILE 325 325 ILE ILE A . A 1 326 ILE 326 326 ILE ILE A . A 1 327 HIS 327 327 HIS HIS A . A 1 328 ILE 328 328 ILE ILE A . A 1 329 ASP 329 329 ASP ASP A . A 1 330 ASP 330 330 ASP ASP A . A 1 331 TYR 331 331 TYR TYR A . A 1 332 ALA 332 332 ALA ALA A . A 1 333 ALA 333 333 ALA ALA A . A 1 334 ALA 334 334 ALA ALA A . A 1 335 LYS 335 335 LYS LYS A . A 1 336 GLU 336 336 GLU GLU A . A 1 337 MET 337 337 MET MET A . A 1 338 LEU 338 338 LEU LEU A . A 1 339 ILE 339 339 ILE ILE A . A 1 340 LYS 340 340 LYS LYS A . A 1 341 LEU 341 341 LEU LEU A . A 1 342 VAL 342 342 VAL VAL A . A 1 343 THR 343 343 THR THR A . A 1 344 ALA 344 344 ALA ALA A . A 1 345 CYS 345 345 CYS CYS A . A 1 346 ASP 346 346 ASP ASP A . A 1 347 LYS 347 347 LYS LYS A . A 1 348 GLN 348 348 GLN GLN A . A 1 349 THR 349 349 THR THR A . A 1 350 VAL 350 350 VAL VAL A . A 1 351 ASP 351 351 ASP ASP A . A 1 352 ALA 352 352 ALA ALA A . A 1 353 ILE 353 353 ILE ILE A . A 1 354 LYS 354 354 LYS LYS A . A 1 355 GLU 355 355 GLU GLU A . A 1 356 ASN 356 356 ASN ASN A . A 1 357 MET 357 357 MET MET A . B 2 1 MET 1 1 MET MET B . B 2 2 ALA 2 2 ALA ALA B . B 2 3 LYS 3 3 LYS LYS B . B 2 4 LEU 4 4 LEU LEU B . B 2 5 ASP 5 5 ASP ASP B . B 2 6 GLU 6 6 GLU GLU B . B 2 7 THR 7 7 THR THR B . B 2 8 LEU 8 8 LEU LEU B . B 2 9 THR 9 9 THR THR B . B 2 10 MET 10 10 MET MET B . B 2 11 LEU 11 11 LEU LEU B . B 2 12 LYS 12 12 LYS LYS B . B 2 13 ASP 13 13 ASP ASP B . B 2 14 LEU 14 14 LEU LEU B . B 2 15 THR 15 15 THR THR B . B 2 16 ASP 16 16 ASP ASP B . B 2 17 ALA 17 17 ALA ALA B . B 2 18 LYS 18 18 LYS LYS B . B 2 19 GLY 19 19 GLY GLY B . B 2 20 ILE 20 20 ILE ILE B . B 2 21 PRO 21 21 PRO PRO B . B 2 22 GLY 22 22 GLY GLY B . B 2 23 ASN 23 23 ASN ASN B . B 2 24 GLU 24 24 GLU GLU B . B 2 25 ARG 25 25 ARG ARG B . B 2 26 GLU 26 26 GLU GLU B . B 2 27 VAL 27 27 VAL VAL B . B 2 28 ARG 28 28 ARG ARG B . B 2 29 GLN 29 29 GLN GLN B . B 2 30 VAL 30 30 VAL VAL B . B 2 31 MET 31 31 MET MET B . B 2 32 LYS 32 32 LYS LYS B . B 2 33 SER 33 33 SER SER B . B 2 34 TYR 34 34 TYR TYR B . B 2 35 ILE 35 35 ILE ILE B . B 2 36 GLU 36 36 GLU GLU B . B 2 37 PRO 37 37 PRO PRO B . B 2 38 PHE 38 38 PHE PHE B . B 2 39 ALA 39 39 ALA ALA B . B 2 40 ASP 40 40 ASP ASP B . B 2 41 GLU 41 41 GLU GLU B . B 2 42 VAL 42 42 VAL VAL B . B 2 43 THR 43 43 THR THR B . B 2 44 THR 44 44 THR THR B . B 2 45 ASP 45 45 ASP ASP B . B 2 46 ARG 46 46 ARG ARG B . B 2 47 LEU 47 47 LEU LEU B . B 2 48 GLY 48 48 GLY GLY B . B 2 49 SER 49 49 SER SER B . B 2 50 LEU 50 50 LEU LEU B . B 2 51 ILE 51 51 ILE ILE B . B 2 52 ALA 52 52 ALA ALA B . B 2 53 LYS 53 53 LYS LYS B . B 2 54 LYS 54 54 LYS LYS B . B 2 55 THR 55 55 THR THR B . B 2 56 GLY 56 56 GLY GLY B . B 2 57 ALA 57 57 ALA ALA B . B 2 58 GLU 58 58 GLU GLU B . B 2 59 ASN 59 59 ASN ASN B . B 2 60 GLY 60 60 GLY GLY B . B 2 61 PRO 61 61 PRO PRO B . B 2 62 LYS 62 62 LYS LYS B . B 2 63 ILE 63 63 ILE ILE B . B 2 64 MET 64 64 MET MET B . B 2 65 ILE 65 65 ILE ILE B . B 2 66 ALA 66 66 ALA ALA B . B 2 67 GLY 67 67 GLY GLY B . B 2 68 HIS 68 68 HIS HIS B . B 2 69 LEU 69 69 LEU LEU B . B 2 70 ASP 70 70 ASP ASP B . B 2 71 GLU 71 71 GLU GLU B . B 2 72 VAL 72 72 VAL VAL B . B 2 73 GLY 73 73 GLY GLY B . B 2 74 PHE 74 74 PHE PHE B . B 2 75 MET 75 75 MET MET B . B 2 76 VAL 76 76 VAL VAL B . B 2 77 THR 77 77 THR THR B . B 2 78 GLN 78 78 GLN GLN B . B 2 79 ILE 79 79 ILE ILE B . B 2 80 THR 80 80 THR THR B . B 2 81 ASP 81 81 ASP ASP B . B 2 82 LYS 82 82 LYS LYS B . B 2 83 GLY 83 83 GLY GLY B . B 2 84 PHE 84 84 PHE PHE B . B 2 85 ILE 85 85 ILE ILE B . B 2 86 ARG 86 86 ARG ARG B . B 2 87 PHE 87 87 PHE PHE B . B 2 88 GLN 88 88 GLN GLN B . B 2 89 THR 89 89 THR THR B . B 2 90 VAL 90 90 VAL VAL B . B 2 91 GLY 91 91 GLY GLY B . B 2 92 GLY 92 92 GLY GLY B . B 2 93 TRP 93 93 TRP TRP B . B 2 94 TRP 94 94 TRP TRP B . B 2 95 ALA 95 95 ALA ALA B . B 2 96 GLN 96 96 GLN GLN B . B 2 97 VAL 97 97 VAL VAL B . B 2 98 MET 98 98 MET MET B . B 2 99 LEU 99 99 LEU LEU B . B 2 100 ALA 100 100 ALA ALA B . B 2 101 GLN 101 101 GLN GLN B . B 2 102 ARG 102 102 ARG ARG B . B 2 103 VAL 103 103 VAL VAL B . B 2 104 THR 104 104 THR THR B . B 2 105 ILE 105 105 ILE ILE B . B 2 106 VAL 106 106 VAL VAL B . B 2 107 THR 107 107 THR THR B . B 2 108 LYS 108 108 LYS LYS B . B 2 109 LYS 109 109 LYS LYS B . B 2 110 GLY 110 110 GLY GLY B . B 2 111 GLU 111 111 GLU GLU B . B 2 112 ILE 112 112 ILE ILE B . B 2 113 THR 113 113 THR THR B . B 2 114 GLY 114 114 GLY GLY B . B 2 115 VAL 115 115 VAL VAL B . B 2 116 ILE 116 116 ILE ILE B . B 2 117 GLY 117 117 GLY GLY B . B 2 118 SER 118 118 SER SER B . B 2 119 LYS 119 119 LYS LYS B . B 2 120 PRO 120 120 PRO PRO B . B 2 121 PRO 121 121 PRO PRO B . B 2 122 HIS 122 122 HIS HIS B . B 2 123 ILE 123 123 ILE ILE B . B 2 124 LEU 124 124 LEU LEU B . B 2 125 SER 125 125 SER SER B . B 2 126 PRO 126 126 PRO PRO B . B 2 127 GLU 127 127 GLU GLU B . B 2 128 ALA 128 128 ALA ALA B . B 2 129 ARG 129 129 ARG ARG B . B 2 130 LYS 130 130 LYS LYS B . B 2 131 LYS 131 131 LYS LYS B . B 2 132 SER 132 132 SER SER B . B 2 133 VAL 133 133 VAL VAL B . B 2 134 GLU 134 134 GLU GLU B . B 2 135 ILE 135 135 ILE ILE B . B 2 136 LYS 136 136 LYS LYS B . B 2 137 ASP 137 137 ASP ASP B . B 2 138 MET 138 138 MET MET B . B 2 139 PHE 139 139 PHE PHE B . B 2 140 ILE 140 140 ILE ILE B . B 2 141 ASP 141 141 ASP ASP B . B 2 142 ILE 142 142 ILE ILE B . B 2 143 GLY 143 143 GLY GLY B . B 2 144 ALA 144 144 ALA ALA B . B 2 145 SER 145 145 SER SER B . B 2 146 SER 146 146 SER SER B . B 2 147 ARG 147 147 ARG ARG B . B 2 148 GLU 148 148 GLU GLU B . B 2 149 GLU 149 149 GLU GLU B . B 2 150 ALA 150 150 ALA ALA B . B 2 151 LEU 151 151 LEU LEU B . B 2 152 GLU 152 152 GLU GLU B . B 2 153 TRP 153 153 TRP TRP B . B 2 154 GLY 154 154 GLY GLY B . B 2 155 VAL 155 155 VAL VAL B . B 2 156 LEU 156 156 LEU LEU B . B 2 157 PRO 157 157 PRO PRO B . B 2 158 GLY 158 158 GLY GLY B . B 2 159 ASP 159 159 ASP ASP B . B 2 160 MET 160 160 MET MET B . B 2 161 ILE 161 161 ILE ILE B . B 2 162 VAL 162 162 VAL VAL B . B 2 163 PRO 163 163 PRO PRO B . B 2 164 HIS 164 164 HIS HIS B . B 2 165 PHE 165 165 PHE PHE B . B 2 166 GLU 166 166 GLU GLU B . B 2 167 PHE 167 167 PHE PHE B . B 2 168 THR 168 168 THR THR B . B 2 169 VAL 169 169 VAL VAL B . B 2 170 MET 170 170 MET MET B . B 2 171 ASN 171 171 ASN ASN B . B 2 172 ASN 172 172 ASN ASN B . B 2 173 GLU 173 173 GLU GLU B . B 2 174 LYS 174 174 LYS LYS B . B 2 175 PHE 175 175 PHE PHE B . B 2 176 LEU 176 176 LEU LEU B . B 2 177 LEU 177 177 LEU LEU B . B 2 178 ALA 178 178 ALA ALA B . B 2 179 LYS 179 179 LYS LYS B . B 2 180 ALA 180 180 ALA ALA B . B 2 181 TRP 181 181 TRP TRP B . B 2 182 ASP 182 182 ASP ASP B . B 2 183 ASN 183 183 ASN ASN B . B 2 184 ARG 184 184 ARG ARG B . B 2 185 ILE 185 185 ILE ILE B . B 2 186 GLY 186 186 GLY GLY B . B 2 187 CYS 187 187 CYS CYS B . B 2 188 ALA 188 188 ALA ALA B . B 2 189 ILE 189 189 ILE ILE B . B 2 190 ALA 190 190 ALA ALA B . B 2 191 ILE 191 191 ILE ILE B . B 2 192 ASP 192 192 ASP ASP B . B 2 193 VAL 193 193 VAL VAL B . B 2 194 LEU 194 194 LEU LEU B . B 2 195 ARG 195 195 ARG ARG B . B 2 196 ASN 196 196 ASN ASN B . B 2 197 LEU 197 197 LEU LEU B . B 2 198 GLN 198 198 GLN GLN B . B 2 199 ASN 199 199 ASN ASN B . B 2 200 THR 200 200 THR THR B . B 2 201 ASP 201 201 ASP ASP B . B 2 202 HIS 202 202 HIS HIS B . B 2 203 PRO 203 203 PRO PRO B . B 2 204 ASN 204 204 ASN ASN B . B 2 205 ILE 205 205 ILE ILE B . B 2 206 VAL 206 206 VAL VAL B . B 2 207 TYR 207 207 TYR TYR B . B 2 208 GLY 208 208 GLY GLY B . B 2 209 VAL 209 209 VAL VAL B . B 2 210 GLY 210 210 GLY GLY B . B 2 211 THR 211 211 THR THR B . B 2 212 VAL 212 212 VAL VAL B . B 2 213 GLN 213 213 GLN GLN B . B 2 214 GLU 214 214 GLU GLU B . B 2 215 GLU 215 215 GLU GLU B . B 2 216 VAL 216 216 VAL VAL B . B 2 217 GLY 217 217 GLY GLY B . B 2 218 LEU 218 218 LEU LEU B . B 2 219 ARG 219 219 ARG ARG B . B 2 220 GLY 220 220 GLY GLY B . B 2 221 ALA 221 221 ALA ALA B . B 2 222 LYS 222 222 LYS LYS B . B 2 223 THR 223 223 THR THR B . B 2 224 ALA 224 224 ALA ALA B . B 2 225 ALA 225 225 ALA ALA B . B 2 226 HIS 226 226 HIS HIS B . B 2 227 THR 227 227 THR THR B . B 2 228 ILE 228 228 ILE ILE B . B 2 229 GLN 229 229 GLN GLN B . B 2 230 PRO 230 230 PRO PRO B . B 2 231 ASP 231 231 ASP ASP B . B 2 232 ILE 232 232 ILE ILE B . B 2 233 ALA 233 233 ALA ALA B . B 2 234 PHE 234 234 PHE PHE B . B 2 235 GLY 235 235 GLY GLY B . B 2 236 VAL 236 236 VAL VAL B . B 2 237 ASP 237 237 ASP ASP B . B 2 238 VAL 238 238 VAL VAL B . B 2 239 GLY 239 239 GLY GLY B . B 2 240 ILE 240 240 ILE ILE B . B 2 241 ALA 241 241 ALA ALA B . B 2 242 GLY 242 242 GLY GLY B . B 2 243 ASP 243 243 ASP ASP B . B 2 244 THR 244 244 THR THR B . B 2 245 PRO 245 245 PRO PRO B . B 2 246 GLY 246 246 GLY GLY B . B 2 247 ILE 247 247 ILE ILE B . B 2 248 SER 248 248 SER SER B . B 2 249 GLU 249 249 GLU GLU B . B 2 250 LYS 250 250 LYS LYS B . B 2 251 GLU 251 251 GLU GLU B . B 2 252 ALA 252 252 ALA ALA B . B 2 253 GLN 253 253 GLN GLN B . B 2 254 SER 254 254 SER SER B . B 2 255 LYS 255 255 LYS LYS B . B 2 256 MET 256 256 MET MET B . B 2 257 GLY 257 257 GLY GLY B . B 2 258 LYS 258 258 LYS LYS B . B 2 259 GLY 259 259 GLY GLY B . B 2 260 PRO 260 260 PRO PRO B . B 2 261 GLN 261 261 GLN GLN B . B 2 262 ILE 262 262 ILE ILE B . B 2 263 ILE 263 263 ILE ILE B . B 2 264 VAL 264 264 VAL VAL B . B 2 265 TYR 265 265 TYR TYR B . B 2 266 ASP 266 266 ASP ASP B . B 2 267 ALA 267 267 ALA ALA B . B 2 268 SER 268 268 SER SER B . B 2 269 MET 269 269 MET MET B . B 2 270 VAL 270 270 VAL VAL B . B 2 271 SER 271 271 SER SER B . B 2 272 HIS 272 272 HIS HIS B . B 2 273 LYS 273 273 LYS LYS B . B 2 274 GLY 274 274 GLY GLY B . B 2 275 LEU 275 275 LEU LEU B . B 2 276 ARG 276 276 ARG ARG B . B 2 277 ASP 277 277 ASP ASP B . B 2 278 ALA 278 278 ALA ALA B . B 2 279 VAL 279 279 VAL VAL B . B 2 280 VAL 280 280 VAL VAL B . B 2 281 ALA 281 281 ALA ALA B . B 2 282 THR 282 282 THR THR B . B 2 283 ALA 283 283 ALA ALA B . B 2 284 GLU 284 284 GLU GLU B . B 2 285 GLU 285 285 GLU GLU B . B 2 286 ALA 286 286 ALA ALA B . B 2 287 GLY 287 287 GLY GLY B . B 2 288 ILE 288 288 ILE ILE B . B 2 289 PRO 289 289 PRO PRO B . B 2 290 TYR 290 290 TYR TYR B . B 2 291 GLN 291 291 GLN GLN B . B 2 292 PHE 292 292 PHE PHE B . B 2 293 ASP 293 293 ASP ASP B . B 2 294 ALA 294 294 ALA ALA B . B 2 295 ILE 295 295 ILE ILE B . B 2 296 ALA 296 296 ALA ALA B . B 2 297 GLY 297 297 GLY GLY B . B 2 298 GLY 298 298 GLY GLY B . B 2 299 GLY 299 299 GLY GLY B . B 2 300 THR 300 300 THR THR B . B 2 301 ASP 301 301 ASP ASP B . B 2 302 SER 302 302 SER SER B . B 2 303 GLY 303 303 GLY GLY B . B 2 304 ALA 304 304 ALA ALA B . B 2 305 ILE 305 305 ILE ILE B . B 2 306 HIS 306 306 HIS HIS B . B 2 307 LEU 307 307 LEU LEU B . B 2 308 THR 308 308 THR THR B . B 2 309 ALA 309 309 ALA ALA B . B 2 310 ASN 310 310 ASN ASN B . B 2 311 GLY 311 311 GLY GLY B . B 2 312 VAL 312 312 VAL VAL B . B 2 313 PRO 313 313 PRO PRO B . B 2 314 ALA 314 314 ALA ALA B . B 2 315 LEU 315 315 LEU LEU B . B 2 316 SER 316 316 SER SER B . B 2 317 ILE 317 317 ILE ILE B . B 2 318 THR 318 318 THR THR B . B 2 319 ILE 319 319 ILE ILE B . B 2 320 ALA 320 320 ALA ALA B . B 2 321 THR 321 321 THR THR B . B 2 322 ARG 322 322 ARG ARG B . B 2 323 TYR 323 323 TYR TYR B . B 2 324 ILE 324 324 ILE ILE B . B 2 325 HIS 325 325 HIS HIS B . B 2 326 THR 326 326 THR THR B . B 2 327 HIS 327 327 HIS HIS B . B 2 328 ALA 328 328 ALA ALA B . B 2 329 ALA 329 329 ALA ALA B . B 2 330 MET 330 330 MET MET B . B 2 331 LEU 331 331 LEU LEU B . B 2 332 HIS 332 332 HIS HIS B . B 2 333 ARG 333 333 ARG ARG B . B 2 334 ASP 334 334 ASP ASP B . B 2 335 ASP 335 335 ASP ASP B . B 2 336 TYR 336 336 TYR TYR B . B 2 337 GLU 337 337 GLU GLU B . B 2 338 ASN 338 338 ASN ASN B . B 2 339 ALA 339 339 ALA ALA B . B 2 340 VAL 340 340 VAL VAL B . B 2 341 LYS 341 341 LYS LYS B . B 2 342 LEU 342 342 LEU LEU B . B 2 343 ILE 343 343 ILE ILE B . B 2 344 THR 344 344 THR THR B . B 2 345 GLU 345 345 GLU GLU B . B 2 346 VAL 346 346 VAL VAL B . B 2 347 ILE 347 347 ILE ILE B . B 2 348 LYS 348 348 LYS LYS B . B 2 349 LYS 349 349 LYS LYS B . B 2 350 LEU 350 350 LEU LEU B . B 2 351 ASP 351 351 ASP ASP B . B 2 352 ARG 352 352 ARG ARG B . B 2 353 LYS 353 353 LYS LYS B . B 2 354 THR 354 354 THR THR B . B 2 355 VAL 355 355 VAL VAL B . B 2 356 ASP 356 356 ASP ASP B . B 2 357 GLU 357 357 GLU GLU B . B 2 358 ILE 358 358 ILE ILE B . B 2 359 THR 359 359 THR THR B . B 2 360 TYR 360 360 TYR TYR B . B 2 361 GLN 361 361 GLN GLN B . # # loop_ # #