data_9A5X # _entry.id 9A5X # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A5X _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A5X pdb_00009a5x 10.2210/pdb9a5x/pdb PDB-Dev PDBDEV_00000290 PDBDEV_00000290 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A5X # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 53956.07 1 CLPX_BACSU 1 MAN POLYMER . 25238.19 2 CLPP_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQAKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAILTKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHGEPPRLLLKDGTEVSQDKTSA MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQAKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAILTKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHGEPPRLLLKDGTEVSQDKTSA . A polypeptide(L) 2 . NO NO MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . PHE 2 1 . LYS 3 1 . PHE 4 1 . ASN 5 1 . GLU 6 1 . GLU 7 1 . LYS 8 1 . GLY 9 1 . GLN 10 1 . LEU 11 1 . LYS 12 1 . CYS 13 1 . SER 14 1 . PHE 15 1 . CYS 16 1 . GLY 17 1 . LYS 18 1 . THR 19 1 . GLN 20 1 . ASP 21 1 . GLN 22 1 . VAL 23 1 . ARG 24 1 . LYS 25 1 . LEU 26 1 . VAL 27 1 . ALA 28 1 . GLY 29 1 . PRO 30 1 . GLY 31 1 . VAL 32 1 . TYR 33 1 . ILE 34 1 . CYS 35 1 . ASP 36 1 . GLU 37 1 . CYS 38 1 . ILE 39 1 . GLU 40 1 . LEU 41 1 . CYS 42 1 . THR 43 1 . GLU 44 1 . ILE 45 1 . VAL 46 1 . GLU 47 1 . GLU 48 1 . GLU 49 1 . LEU 50 1 . GLY 51 1 . THR 52 1 . GLU 53 1 . GLU 54 1 . GLU 55 1 . VAL 56 1 . GLU 57 1 . PHE 58 1 . LYS 59 1 . ASP 60 1 . VAL 61 1 . PRO 62 1 . LYS 63 1 . PRO 64 1 . GLN 65 1 . GLU 66 1 . ILE 67 1 . ARG 68 1 . GLU 69 1 . ILE 70 1 . LEU 71 1 . ASN 72 1 . GLU 73 1 . TYR 74 1 . VAL 75 1 . ILE 76 1 . GLY 77 1 . GLN 78 1 . ASP 79 1 . GLN 80 1 . ALA 81 1 . LYS 82 1 . LYS 83 1 . SER 84 1 . LEU 85 1 . ALA 86 1 . VAL 87 1 . ALA 88 1 . VAL 89 1 . TYR 90 1 . ASN 91 1 . HIS 92 1 . TYR 93 1 . LYS 94 1 . ARG 95 1 . ILE 96 1 . ASN 97 1 . SER 98 1 . ASN 99 1 . SER 100 1 . LYS 101 1 . VAL 102 1 . ASP 103 1 . ASP 104 1 . VAL 105 1 . GLU 106 1 . LEU 107 1 . SER 108 1 . LYS 109 1 . SER 110 1 . ASN 111 1 . ILE 112 1 . SER 113 1 . LEU 114 1 . ILE 115 1 . GLY 116 1 . PRO 117 1 . THR 118 1 . GLY 119 1 . SER 120 1 . GLY 121 1 . LYS 122 1 . THR 123 1 . LEU 124 1 . LEU 125 1 . ALA 126 1 . GLN 127 1 . THR 128 1 . LEU 129 1 . ALA 130 1 . ARG 131 1 . ILE 132 1 . LEU 133 1 . ASN 134 1 . VAL 135 1 . PRO 136 1 . PHE 137 1 . ALA 138 1 . ILE 139 1 . ALA 140 1 . ASP 141 1 . ALA 142 1 . THR 143 1 . SER 144 1 . LEU 145 1 . THR 146 1 . GLU 147 1 . ALA 148 1 . GLY 149 1 . TYR 150 1 . VAL 151 1 . GLY 152 1 . GLU 153 1 . ASP 154 1 . VAL 155 1 . GLU 156 1 . ASN 157 1 . ILE 158 1 . LEU 159 1 . LEU 160 1 . LYS 161 1 . LEU 162 1 . ILE 163 1 . GLN 164 1 . ALA 165 1 . ALA 166 1 . ASP 167 1 . TYR 168 1 . ASP 169 1 . VAL 170 1 . GLU 171 1 . LYS 172 1 . ALA 173 1 . GLU 174 1 . LYS 175 1 . GLY 176 1 . ILE 177 1 . ILE 178 1 . TYR 179 1 . ILE 180 1 . ASP 181 1 . GLU 182 1 . ILE 183 1 . ASP 184 1 . LYS 185 1 . VAL 186 1 . ALA 187 1 . ARG 188 1 . LYS 189 1 . SER 190 1 . GLU 191 1 . ASN 192 1 . PRO 193 1 . SER 194 1 . ILE 195 1 . THR 196 1 . ARG 197 1 . ASP 198 1 . VAL 199 1 . SER 200 1 . GLY 201 1 . GLU 202 1 . GLY 203 1 . VAL 204 1 . GLN 205 1 . GLN 206 1 . ALA 207 1 . LEU 208 1 . LEU 209 1 . LYS 210 1 . ILE 211 1 . LEU 212 1 . GLU 213 1 . GLY 214 1 . THR 215 1 . VAL 216 1 . ALA 217 1 . SER 218 1 . VAL 219 1 . PRO 220 1 . PRO 221 1 . GLN 222 1 . GLY 223 1 . GLY 224 1 . ARG 225 1 . LYS 226 1 . HIS 227 1 . PRO 228 1 . HIS 229 1 . GLN 230 1 . GLU 231 1 . PHE 232 1 . ILE 233 1 . GLN 234 1 . ILE 235 1 . ASP 236 1 . THR 237 1 . THR 238 1 . ASN 239 1 . ILE 240 1 . LEU 241 1 . PHE 242 1 . ILE 243 1 . CYS 244 1 . GLY 245 1 . GLY 246 1 . ALA 247 1 . PHE 248 1 . ASP 249 1 . GLY 250 1 . ILE 251 1 . GLU 252 1 . GLN 253 1 . ILE 254 1 . ILE 255 1 . LYS 256 1 . ARG 257 1 . ARG 258 1 . LEU 259 1 . GLY 260 1 . GLN 261 1 . LYS 262 1 . VAL 263 1 . ILE 264 1 . GLY 265 1 . PHE 266 1 . GLY 267 1 . ALA 268 1 . ASP 269 1 . ASN 270 1 . LYS 271 1 . ALA 272 1 . ALA 273 1 . ASP 274 1 . LEU 275 1 . GLU 276 1 . LYS 277 1 . GLU 278 1 . ASP 279 1 . LEU 280 1 . LEU 281 1 . SER 282 1 . LYS 283 1 . VAL 284 1 . LEU 285 1 . PRO 286 1 . GLU 287 1 . ASP 288 1 . LEU 289 1 . LEU 290 1 . ARG 291 1 . PHE 292 1 . GLY 293 1 . LEU 294 1 . ILE 295 1 . PRO 296 1 . GLU 297 1 . PHE 298 1 . ILE 299 1 . GLY 300 1 . ARG 301 1 . LEU 302 1 . PRO 303 1 . VAL 304 1 . ILE 305 1 . ALA 306 1 . SER 307 1 . LEU 308 1 . GLU 309 1 . LYS 310 1 . LEU 311 1 . ASP 312 1 . GLU 313 1 . GLU 314 1 . ALA 315 1 . LEU 316 1 . VAL 317 1 . ALA 318 1 . ILE 319 1 . LEU 320 1 . THR 321 1 . LYS 322 1 . PRO 323 1 . LYS 324 1 . ASN 325 1 . ALA 326 1 . LEU 327 1 . VAL 328 1 . LYS 329 1 . GLN 330 1 . PHE 331 1 . LYS 332 1 . LYS 333 1 . MET 334 1 . LEU 335 1 . GLU 336 1 . LEU 337 1 . ASP 338 1 . ASN 339 1 . VAL 340 1 . GLU 341 1 . LEU 342 1 . GLU 343 1 . PHE 344 1 . GLU 345 1 . GLU 346 1 . GLU 347 1 . ALA 348 1 . LEU 349 1 . SER 350 1 . GLU 351 1 . ILE 352 1 . ALA 353 1 . LYS 354 1 . LYS 355 1 . ALA 356 1 . ILE 357 1 . GLU 358 1 . ARG 359 1 . LYS 360 1 . THR 361 1 . GLY 362 1 . ALA 363 1 . ARG 364 1 . GLY 365 1 . LEU 366 1 . ARG 367 1 . SER 368 1 . ILE 369 1 . ILE 370 1 . GLU 371 1 . GLY 372 1 . ILE 373 1 . MET 374 1 . LEU 375 1 . ASP 376 1 . VAL 377 1 . MET 378 1 . PHE 379 1 . GLU 380 1 . LEU 381 1 . PRO 382 1 . SER 383 1 . ARG 384 1 . ASP 385 1 . ASP 386 1 . ILE 387 1 . GLU 388 1 . LYS 389 1 . CYS 390 1 . VAL 391 1 . ILE 392 1 . THR 393 1 . GLY 394 1 . ALA 395 1 . THR 396 1 . VAL 397 1 . THR 398 1 . HIS 399 1 . GLY 400 1 . GLU 401 1 . PRO 402 1 . PRO 403 1 . ARG 404 1 . LEU 405 1 . LEU 406 1 . LEU 407 1 . LYS 408 1 . ASP 409 1 . GLY 410 1 . THR 411 1 . GLU 412 1 . VAL 413 1 . SER 414 1 . GLN 415 1 . ASP 416 1 . LYS 417 1 . THR 418 1 . SER 419 1 . ALA 420 2 . MET 1 2 . ASN 2 2 . LEU 3 2 . ILE 4 2 . PRO 5 2 . THR 6 2 . VAL 7 2 . ILE 8 2 . GLU 9 2 . GLN 10 2 . THR 11 2 . ASN 12 2 . ARG 13 2 . GLY 14 2 . GLU 15 2 . ARG 16 2 . ALA 17 2 . TYR 18 2 . ASP 19 2 . ILE 20 2 . TYR 21 2 . SER 22 2 . ARG 23 2 . LEU 24 2 . LEU 25 2 . LYS 26 2 . ASP 27 2 . ARG 28 2 . ILE 29 2 . ILE 30 2 . MET 31 2 . LEU 32 2 . GLY 33 2 . SER 34 2 . ALA 35 2 . ILE 36 2 . ASP 37 2 . ASP 38 2 . ASN 39 2 . VAL 40 2 . ALA 41 2 . ASN 42 2 . SER 43 2 . ILE 44 2 . VAL 45 2 . SER 46 2 . GLN 47 2 . LEU 48 2 . LEU 49 2 . PHE 50 2 . LEU 51 2 . ALA 52 2 . ALA 53 2 . GLU 54 2 . ASP 55 2 . PRO 56 2 . GLU 57 2 . LYS 58 2 . GLU 59 2 . ILE 60 2 . SER 61 2 . LEU 62 2 . TYR 63 2 . ILE 64 2 . ASN 65 2 . SER 66 2 . PRO 67 2 . GLY 68 2 . GLY 69 2 . SER 70 2 . ILE 71 2 . THR 72 2 . ALA 73 2 . GLY 74 2 . MET 75 2 . ALA 76 2 . ILE 77 2 . TYR 78 2 . ASP 79 2 . THR 80 2 . MET 81 2 . GLN 82 2 . PHE 83 2 . ILE 84 2 . LYS 85 2 . PRO 86 2 . LYS 87 2 . VAL 88 2 . SER 89 2 . THR 90 2 . ILE 91 2 . CYS 92 2 . ILE 93 2 . GLY 94 2 . MET 95 2 . ALA 96 2 . ALA 97 2 . SER 98 2 . MET 99 2 . GLY 100 2 . ALA 101 2 . PHE 102 2 . LEU 103 2 . LEU 104 2 . ALA 105 2 . ALA 106 2 . GLY 107 2 . GLU 108 2 . LYS 109 2 . GLY 110 2 . LYS 111 2 . ARG 112 2 . TYR 113 2 . ALA 114 2 . LEU 115 2 . PRO 116 2 . ASN 117 2 . SER 118 2 . GLU 119 2 . VAL 120 2 . MET 121 2 . ILE 122 2 . HIS 123 2 . GLN 124 2 . PRO 125 2 . LEU 126 2 . GLY 127 2 . GLY 128 2 . ALA 129 2 . GLN 130 2 . GLY 131 2 . GLN 132 2 . ALA 133 2 . THR 134 2 . GLU 135 2 . ILE 136 2 . GLU 137 2 . ILE 138 2 . ALA 139 2 . ALA 140 2 . LYS 141 2 . ARG 142 2 . ILE 143 2 . LEU 144 2 . LEU 145 2 . LEU 146 2 . ARG 147 2 . ASP 148 2 . LYS 149 2 . LEU 150 2 . ASN 151 2 . LYS 152 2 . VAL 153 2 . LEU 154 2 . ALA 155 2 . GLU 156 2 . ARG 157 2 . THR 158 2 . GLY 159 2 . GLN 160 2 . PRO 161 2 . LEU 162 2 . GLU 163 2 . VAL 164 2 . ILE 165 2 . GLU 166 2 . ARG 167 2 . ASP 168 2 . THR 169 2 . ASP 170 2 . ARG 171 2 . ASP 172 2 . ASN 173 2 . PHE 174 2 . LYS 175 2 . SER 176 2 . ALA 177 2 . GLU 178 2 . GLU 179 2 . ALA 180 2 . LEU 181 2 . GLU 182 2 . TYR 183 2 . GLY 184 2 . LEU 185 2 . ILE 186 2 . ASP 187 2 . LYS 188 2 . ILE 189 2 . LEU 190 2 . THR 191 2 . HIS 192 2 . THR 193 2 . GLU 194 2 . ASP 195 2 . LYS 196 2 . LYS 197 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 1 1 1 SDA 271 188 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 2 2 1 SDA 271 196 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 3 3 1 SDA 262 188 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 4 4 1 SDA 277 196 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 5 5 1 SDA 277 197 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 6 6 1 SDA 262 196 LYS LYS 1 . CLPX_BACSU CLPP_BACSU 1 2 7 7 1 SDA 271 197 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A B . . LYS LYS . 25 1 2 1 1 by-residue NO 0.95 "upper bound" 271 188 . . A B . . LYS LYS . 25 1 2 2 2 by-residue NO 0.95 "upper bound" 271 196 . . A B . . LYS LYS . 25 1 2 3 3 by-residue NO 0.95 "upper bound" 262 188 . . A B . . LYS LYS . 25 1 2 4 4 by-residue NO 0.95 "upper bound" 277 196 . . A B . . LYS LYS . 25 1 2 5 5 by-residue NO 0.95 "upper bound" 277 197 . . A B . . LYS LYS . 25 1 2 6 6 by-residue NO 0.95 "upper bound" 262 196 . . A B . . LYS LYS . 25 1 2 7 7 by-residue NO 0.95 "upper bound" 271 197 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET ALA 1 1 1 420 MET LYS 2 2 1 197 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A CLPX_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B CLPP_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of CLPX-CLPP by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name CLPX-CLPP # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A CLPX_BACSU 1 1 1 1 1 B CLPP_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A5X _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of CLPX-CLPP by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type CLPX_BACSU 1 A . . . . . . CLPP_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . P50866 . MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQAKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAILTKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHGEPPRLLLKDGTEVSQDKTSA B UNP . 2 2 1 . P80244 . MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 420 1 1 420 2 1 197 2 1 197 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 PHE 2 2 PHE PHE A . A 1 3 LYS 3 3 LYS LYS A . A 1 4 PHE 4 4 PHE PHE A . A 1 5 ASN 5 5 ASN ASN A . A 1 6 GLU 6 6 GLU GLU A . A 1 7 GLU 7 7 GLU GLU A . A 1 8 LYS 8 8 LYS LYS A . A 1 9 GLY 9 9 GLY GLY A . A 1 10 GLN 10 10 GLN GLN A . A 1 11 LEU 11 11 LEU LEU A . A 1 12 LYS 12 12 LYS LYS A . A 1 13 CYS 13 13 CYS CYS A . A 1 14 SER 14 14 SER SER A . A 1 15 PHE 15 15 PHE PHE A . A 1 16 CYS 16 16 CYS CYS A . A 1 17 GLY 17 17 GLY GLY A . A 1 18 LYS 18 18 LYS LYS A . A 1 19 THR 19 19 THR THR A . A 1 20 GLN 20 20 GLN GLN A . A 1 21 ASP 21 21 ASP ASP A . A 1 22 GLN 22 22 GLN GLN A . A 1 23 VAL 23 23 VAL VAL A . A 1 24 ARG 24 24 ARG ARG A . A 1 25 LYS 25 25 LYS LYS A . A 1 26 LEU 26 26 LEU LEU A . A 1 27 VAL 27 27 VAL VAL A . A 1 28 ALA 28 28 ALA ALA A . A 1 29 GLY 29 29 GLY GLY A . A 1 30 PRO 30 30 PRO PRO A . A 1 31 GLY 31 31 GLY GLY A . A 1 32 VAL 32 32 VAL VAL A . A 1 33 TYR 33 33 TYR TYR A . A 1 34 ILE 34 34 ILE ILE A . A 1 35 CYS 35 35 CYS CYS A . A 1 36 ASP 36 36 ASP ASP A . A 1 37 GLU 37 37 GLU GLU A . A 1 38 CYS 38 38 CYS CYS A . A 1 39 ILE 39 39 ILE ILE A . A 1 40 GLU 40 40 GLU GLU A . A 1 41 LEU 41 41 LEU LEU A . A 1 42 CYS 42 42 CYS CYS A . A 1 43 THR 43 43 THR THR A . A 1 44 GLU 44 44 GLU GLU A . A 1 45 ILE 45 45 ILE ILE A . A 1 46 VAL 46 46 VAL VAL A . A 1 47 GLU 47 47 GLU GLU A . A 1 48 GLU 48 48 GLU GLU A . A 1 49 GLU 49 49 GLU GLU A . A 1 50 LEU 50 50 LEU LEU A . A 1 51 GLY 51 51 GLY GLY A . A 1 52 THR 52 52 THR THR A . A 1 53 GLU 53 53 GLU GLU A . A 1 54 GLU 54 54 GLU GLU A . A 1 55 GLU 55 55 GLU GLU A . A 1 56 VAL 56 56 VAL VAL A . A 1 57 GLU 57 57 GLU GLU A . A 1 58 PHE 58 58 PHE PHE A . A 1 59 LYS 59 59 LYS LYS A . A 1 60 ASP 60 60 ASP ASP A . A 1 61 VAL 61 61 VAL VAL A . A 1 62 PRO 62 62 PRO PRO A . A 1 63 LYS 63 63 LYS LYS A . A 1 64 PRO 64 64 PRO PRO A . A 1 65 GLN 65 65 GLN GLN A . A 1 66 GLU 66 66 GLU GLU A . A 1 67 ILE 67 67 ILE ILE A . A 1 68 ARG 68 68 ARG ARG A . A 1 69 GLU 69 69 GLU GLU A . A 1 70 ILE 70 70 ILE ILE A . A 1 71 LEU 71 71 LEU LEU A . A 1 72 ASN 72 72 ASN ASN A . A 1 73 GLU 73 73 GLU GLU A . A 1 74 TYR 74 74 TYR TYR A . A 1 75 VAL 75 75 VAL VAL A . A 1 76 ILE 76 76 ILE ILE A . A 1 77 GLY 77 77 GLY GLY A . A 1 78 GLN 78 78 GLN GLN A . A 1 79 ASP 79 79 ASP ASP A . A 1 80 GLN 80 80 GLN GLN A . A 1 81 ALA 81 81 ALA ALA A . A 1 82 LYS 82 82 LYS LYS A . A 1 83 LYS 83 83 LYS LYS A . A 1 84 SER 84 84 SER SER A . A 1 85 LEU 85 85 LEU LEU A . A 1 86 ALA 86 86 ALA ALA A . A 1 87 VAL 87 87 VAL VAL A . A 1 88 ALA 88 88 ALA ALA A . A 1 89 VAL 89 89 VAL VAL A . A 1 90 TYR 90 90 TYR TYR A . A 1 91 ASN 91 91 ASN ASN A . A 1 92 HIS 92 92 HIS HIS A . A 1 93 TYR 93 93 TYR TYR A . A 1 94 LYS 94 94 LYS LYS A . A 1 95 ARG 95 95 ARG ARG A . A 1 96 ILE 96 96 ILE ILE A . A 1 97 ASN 97 97 ASN ASN A . A 1 98 SER 98 98 SER SER A . A 1 99 ASN 99 99 ASN ASN A . A 1 100 SER 100 100 SER SER A . A 1 101 LYS 101 101 LYS LYS A . A 1 102 VAL 102 102 VAL VAL A . A 1 103 ASP 103 103 ASP ASP A . A 1 104 ASP 104 104 ASP ASP A . A 1 105 VAL 105 105 VAL VAL A . A 1 106 GLU 106 106 GLU GLU A . A 1 107 LEU 107 107 LEU LEU A . A 1 108 SER 108 108 SER SER A . A 1 109 LYS 109 109 LYS LYS A . A 1 110 SER 110 110 SER SER A . A 1 111 ASN 111 111 ASN ASN A . A 1 112 ILE 112 112 ILE ILE A . A 1 113 SER 113 113 SER SER A . A 1 114 LEU 114 114 LEU LEU A . A 1 115 ILE 115 115 ILE ILE A . A 1 116 GLY 116 116 GLY GLY A . A 1 117 PRO 117 117 PRO PRO A . A 1 118 THR 118 118 THR THR A . A 1 119 GLY 119 119 GLY GLY A . A 1 120 SER 120 120 SER SER A . A 1 121 GLY 121 121 GLY GLY A . A 1 122 LYS 122 122 LYS LYS A . A 1 123 THR 123 123 THR THR A . A 1 124 LEU 124 124 LEU LEU A . A 1 125 LEU 125 125 LEU LEU A . A 1 126 ALA 126 126 ALA ALA A . A 1 127 GLN 127 127 GLN GLN A . A 1 128 THR 128 128 THR THR A . A 1 129 LEU 129 129 LEU LEU A . A 1 130 ALA 130 130 ALA ALA A . A 1 131 ARG 131 131 ARG ARG A . A 1 132 ILE 132 132 ILE ILE A . A 1 133 LEU 133 133 LEU LEU A . A 1 134 ASN 134 134 ASN ASN A . A 1 135 VAL 135 135 VAL VAL A . A 1 136 PRO 136 136 PRO PRO A . A 1 137 PHE 137 137 PHE PHE A . A 1 138 ALA 138 138 ALA ALA A . A 1 139 ILE 139 139 ILE ILE A . A 1 140 ALA 140 140 ALA ALA A . A 1 141 ASP 141 141 ASP ASP A . A 1 142 ALA 142 142 ALA ALA A . A 1 143 THR 143 143 THR THR A . A 1 144 SER 144 144 SER SER A . A 1 145 LEU 145 145 LEU LEU A . A 1 146 THR 146 146 THR THR A . A 1 147 GLU 147 147 GLU GLU A . A 1 148 ALA 148 148 ALA ALA A . A 1 149 GLY 149 149 GLY GLY A . A 1 150 TYR 150 150 TYR TYR A . A 1 151 VAL 151 151 VAL VAL A . A 1 152 GLY 152 152 GLY GLY A . A 1 153 GLU 153 153 GLU GLU A . A 1 154 ASP 154 154 ASP ASP A . A 1 155 VAL 155 155 VAL VAL A . A 1 156 GLU 156 156 GLU GLU A . A 1 157 ASN 157 157 ASN ASN A . A 1 158 ILE 158 158 ILE ILE A . A 1 159 LEU 159 159 LEU LEU A . A 1 160 LEU 160 160 LEU LEU A . A 1 161 LYS 161 161 LYS LYS A . A 1 162 LEU 162 162 LEU LEU A . A 1 163 ILE 163 163 ILE ILE A . A 1 164 GLN 164 164 GLN GLN A . A 1 165 ALA 165 165 ALA ALA A . A 1 166 ALA 166 166 ALA ALA A . A 1 167 ASP 167 167 ASP ASP A . A 1 168 TYR 168 168 TYR TYR A . A 1 169 ASP 169 169 ASP ASP A . A 1 170 VAL 170 170 VAL VAL A . A 1 171 GLU 171 171 GLU GLU A . A 1 172 LYS 172 172 LYS LYS A . A 1 173 ALA 173 173 ALA ALA A . A 1 174 GLU 174 174 GLU GLU A . A 1 175 LYS 175 175 LYS LYS A . A 1 176 GLY 176 176 GLY GLY A . A 1 177 ILE 177 177 ILE ILE A . A 1 178 ILE 178 178 ILE ILE A . A 1 179 TYR 179 179 TYR TYR A . A 1 180 ILE 180 180 ILE ILE A . A 1 181 ASP 181 181 ASP ASP A . A 1 182 GLU 182 182 GLU GLU A . A 1 183 ILE 183 183 ILE ILE A . A 1 184 ASP 184 184 ASP ASP A . A 1 185 LYS 185 185 LYS LYS A . A 1 186 VAL 186 186 VAL VAL A . A 1 187 ALA 187 187 ALA ALA A . A 1 188 ARG 188 188 ARG ARG A . A 1 189 LYS 189 189 LYS LYS A . A 1 190 SER 190 190 SER SER A . A 1 191 GLU 191 191 GLU GLU A . A 1 192 ASN 192 192 ASN ASN A . A 1 193 PRO 193 193 PRO PRO A . A 1 194 SER 194 194 SER SER A . A 1 195 ILE 195 195 ILE ILE A . A 1 196 THR 196 196 THR THR A . A 1 197 ARG 197 197 ARG ARG A . A 1 198 ASP 198 198 ASP ASP A . A 1 199 VAL 199 199 VAL VAL A . A 1 200 SER 200 200 SER SER A . A 1 201 GLY 201 201 GLY GLY A . A 1 202 GLU 202 202 GLU GLU A . A 1 203 GLY 203 203 GLY GLY A . A 1 204 VAL 204 204 VAL VAL A . A 1 205 GLN 205 205 GLN GLN A . A 1 206 GLN 206 206 GLN GLN A . A 1 207 ALA 207 207 ALA ALA A . A 1 208 LEU 208 208 LEU LEU A . A 1 209 LEU 209 209 LEU LEU A . A 1 210 LYS 210 210 LYS LYS A . A 1 211 ILE 211 211 ILE ILE A . A 1 212 LEU 212 212 LEU LEU A . A 1 213 GLU 213 213 GLU GLU A . A 1 214 GLY 214 214 GLY GLY A . A 1 215 THR 215 215 THR THR A . A 1 216 VAL 216 216 VAL VAL A . A 1 217 ALA 217 217 ALA ALA A . A 1 218 SER 218 218 SER SER A . A 1 219 VAL 219 219 VAL VAL A . A 1 220 PRO 220 220 PRO PRO A . A 1 221 PRO 221 221 PRO PRO A . A 1 222 GLN 222 222 GLN GLN A . A 1 223 GLY 223 223 GLY GLY A . A 1 224 GLY 224 224 GLY GLY A . A 1 225 ARG 225 225 ARG ARG A . A 1 226 LYS 226 226 LYS LYS A . A 1 227 HIS 227 227 HIS HIS A . A 1 228 PRO 228 228 PRO PRO A . A 1 229 HIS 229 229 HIS HIS A . A 1 230 GLN 230 230 GLN GLN A . A 1 231 GLU 231 231 GLU GLU A . A 1 232 PHE 232 232 PHE PHE A . A 1 233 ILE 233 233 ILE ILE A . A 1 234 GLN 234 234 GLN GLN A . A 1 235 ILE 235 235 ILE ILE A . A 1 236 ASP 236 236 ASP ASP A . A 1 237 THR 237 237 THR THR A . A 1 238 THR 238 238 THR THR A . A 1 239 ASN 239 239 ASN ASN A . A 1 240 ILE 240 240 ILE ILE A . A 1 241 LEU 241 241 LEU LEU A . A 1 242 PHE 242 242 PHE PHE A . A 1 243 ILE 243 243 ILE ILE A . A 1 244 CYS 244 244 CYS CYS A . A 1 245 GLY 245 245 GLY GLY A . A 1 246 GLY 246 246 GLY GLY A . A 1 247 ALA 247 247 ALA ALA A . A 1 248 PHE 248 248 PHE PHE A . A 1 249 ASP 249 249 ASP ASP A . A 1 250 GLY 250 250 GLY GLY A . A 1 251 ILE 251 251 ILE ILE A . A 1 252 GLU 252 252 GLU GLU A . A 1 253 GLN 253 253 GLN GLN A . A 1 254 ILE 254 254 ILE ILE A . A 1 255 ILE 255 255 ILE ILE A . A 1 256 LYS 256 256 LYS LYS A . A 1 257 ARG 257 257 ARG ARG A . A 1 258 ARG 258 258 ARG ARG A . A 1 259 LEU 259 259 LEU LEU A . A 1 260 GLY 260 260 GLY GLY A . A 1 261 GLN 261 261 GLN GLN A . A 1 262 LYS 262 262 LYS LYS A . A 1 263 VAL 263 263 VAL VAL A . A 1 264 ILE 264 264 ILE ILE A . A 1 265 GLY 265 265 GLY GLY A . A 1 266 PHE 266 266 PHE PHE A . A 1 267 GLY 267 267 GLY GLY A . A 1 268 ALA 268 268 ALA ALA A . A 1 269 ASP 269 269 ASP ASP A . A 1 270 ASN 270 270 ASN ASN A . A 1 271 LYS 271 271 LYS LYS A . A 1 272 ALA 272 272 ALA ALA A . A 1 273 ALA 273 273 ALA ALA A . A 1 274 ASP 274 274 ASP ASP A . A 1 275 LEU 275 275 LEU LEU A . A 1 276 GLU 276 276 GLU GLU A . A 1 277 LYS 277 277 LYS LYS A . A 1 278 GLU 278 278 GLU GLU A . A 1 279 ASP 279 279 ASP ASP A . A 1 280 LEU 280 280 LEU LEU A . A 1 281 LEU 281 281 LEU LEU A . A 1 282 SER 282 282 SER SER A . A 1 283 LYS 283 283 LYS LYS A . A 1 284 VAL 284 284 VAL VAL A . A 1 285 LEU 285 285 LEU LEU A . A 1 286 PRO 286 286 PRO PRO A . A 1 287 GLU 287 287 GLU GLU A . A 1 288 ASP 288 288 ASP ASP A . A 1 289 LEU 289 289 LEU LEU A . A 1 290 LEU 290 290 LEU LEU A . A 1 291 ARG 291 291 ARG ARG A . A 1 292 PHE 292 292 PHE PHE A . A 1 293 GLY 293 293 GLY GLY A . A 1 294 LEU 294 294 LEU LEU A . A 1 295 ILE 295 295 ILE ILE A . A 1 296 PRO 296 296 PRO PRO A . A 1 297 GLU 297 297 GLU GLU A . A 1 298 PHE 298 298 PHE PHE A . A 1 299 ILE 299 299 ILE ILE A . A 1 300 GLY 300 300 GLY GLY A . A 1 301 ARG 301 301 ARG ARG A . A 1 302 LEU 302 302 LEU LEU A . A 1 303 PRO 303 303 PRO PRO A . A 1 304 VAL 304 304 VAL VAL A . A 1 305 ILE 305 305 ILE ILE A . A 1 306 ALA 306 306 ALA ALA A . A 1 307 SER 307 307 SER SER A . A 1 308 LEU 308 308 LEU LEU A . A 1 309 GLU 309 309 GLU GLU A . A 1 310 LYS 310 310 LYS LYS A . A 1 311 LEU 311 311 LEU LEU A . A 1 312 ASP 312 312 ASP ASP A . A 1 313 GLU 313 313 GLU GLU A . A 1 314 GLU 314 314 GLU GLU A . A 1 315 ALA 315 315 ALA ALA A . A 1 316 LEU 316 316 LEU LEU A . A 1 317 VAL 317 317 VAL VAL A . A 1 318 ALA 318 318 ALA ALA A . A 1 319 ILE 319 319 ILE ILE A . A 1 320 LEU 320 320 LEU LEU A . A 1 321 THR 321 321 THR THR A . A 1 322 LYS 322 322 LYS LYS A . A 1 323 PRO 323 323 PRO PRO A . A 1 324 LYS 324 324 LYS LYS A . A 1 325 ASN 325 325 ASN ASN A . A 1 326 ALA 326 326 ALA ALA A . A 1 327 LEU 327 327 LEU LEU A . A 1 328 VAL 328 328 VAL VAL A . A 1 329 LYS 329 329 LYS LYS A . A 1 330 GLN 330 330 GLN GLN A . A 1 331 PHE 331 331 PHE PHE A . A 1 332 LYS 332 332 LYS LYS A . A 1 333 LYS 333 333 LYS LYS A . A 1 334 MET 334 334 MET MET A . A 1 335 LEU 335 335 LEU LEU A . A 1 336 GLU 336 336 GLU GLU A . A 1 337 LEU 337 337 LEU LEU A . A 1 338 ASP 338 338 ASP ASP A . A 1 339 ASN 339 339 ASN ASN A . A 1 340 VAL 340 340 VAL VAL A . A 1 341 GLU 341 341 GLU GLU A . A 1 342 LEU 342 342 LEU LEU A . A 1 343 GLU 343 343 GLU GLU A . A 1 344 PHE 344 344 PHE PHE A . A 1 345 GLU 345 345 GLU GLU A . A 1 346 GLU 346 346 GLU GLU A . A 1 347 GLU 347 347 GLU GLU A . A 1 348 ALA 348 348 ALA ALA A . A 1 349 LEU 349 349 LEU LEU A . A 1 350 SER 350 350 SER SER A . A 1 351 GLU 351 351 GLU GLU A . A 1 352 ILE 352 352 ILE ILE A . A 1 353 ALA 353 353 ALA ALA A . A 1 354 LYS 354 354 LYS LYS A . A 1 355 LYS 355 355 LYS LYS A . A 1 356 ALA 356 356 ALA ALA A . A 1 357 ILE 357 357 ILE ILE A . A 1 358 GLU 358 358 GLU GLU A . A 1 359 ARG 359 359 ARG ARG A . A 1 360 LYS 360 360 LYS LYS A . A 1 361 THR 361 361 THR THR A . A 1 362 GLY 362 362 GLY GLY A . A 1 363 ALA 363 363 ALA ALA A . A 1 364 ARG 364 364 ARG ARG A . A 1 365 GLY 365 365 GLY GLY A . A 1 366 LEU 366 366 LEU LEU A . A 1 367 ARG 367 367 ARG ARG A . A 1 368 SER 368 368 SER SER A . A 1 369 ILE 369 369 ILE ILE A . A 1 370 ILE 370 370 ILE ILE A . A 1 371 GLU 371 371 GLU GLU A . A 1 372 GLY 372 372 GLY GLY A . A 1 373 ILE 373 373 ILE ILE A . A 1 374 MET 374 374 MET MET A . A 1 375 LEU 375 375 LEU LEU A . A 1 376 ASP 376 376 ASP ASP A . A 1 377 VAL 377 377 VAL VAL A . A 1 378 MET 378 378 MET MET A . A 1 379 PHE 379 379 PHE PHE A . A 1 380 GLU 380 380 GLU GLU A . A 1 381 LEU 381 381 LEU LEU A . A 1 382 PRO 382 382 PRO PRO A . A 1 383 SER 383 383 SER SER A . A 1 384 ARG 384 384 ARG ARG A . A 1 385 ASP 385 385 ASP ASP A . A 1 386 ASP 386 386 ASP ASP A . A 1 387 ILE 387 387 ILE ILE A . A 1 388 GLU 388 388 GLU GLU A . A 1 389 LYS 389 389 LYS LYS A . A 1 390 CYS 390 390 CYS CYS A . A 1 391 VAL 391 391 VAL VAL A . A 1 392 ILE 392 392 ILE ILE A . A 1 393 THR 393 393 THR THR A . A 1 394 GLY 394 394 GLY GLY A . A 1 395 ALA 395 395 ALA ALA A . A 1 396 THR 396 396 THR THR A . A 1 397 VAL 397 397 VAL VAL A . A 1 398 THR 398 398 THR THR A . A 1 399 HIS 399 399 HIS HIS A . A 1 400 GLY 400 400 GLY GLY A . A 1 401 GLU 401 401 GLU GLU A . A 1 402 PRO 402 402 PRO PRO A . A 1 403 PRO 403 403 PRO PRO A . A 1 404 ARG 404 404 ARG ARG A . A 1 405 LEU 405 405 LEU LEU A . A 1 406 LEU 406 406 LEU LEU A . A 1 407 LEU 407 407 LEU LEU A . A 1 408 LYS 408 408 LYS LYS A . A 1 409 ASP 409 409 ASP ASP A . A 1 410 GLY 410 410 GLY GLY A . A 1 411 THR 411 411 THR THR A . A 1 412 GLU 412 412 GLU GLU A . A 1 413 VAL 413 413 VAL VAL A . A 1 414 SER 414 414 SER SER A . A 1 415 GLN 415 415 GLN GLN A . A 1 416 ASP 416 416 ASP ASP A . A 1 417 LYS 417 417 LYS LYS A . A 1 418 THR 418 418 THR THR A . A 1 419 SER 419 419 SER SER A . A 1 420 ALA 420 420 ALA ALA A . B 2 1 MET 1 1 MET MET B . B 2 2 ASN 2 2 ASN ASN B . B 2 3 LEU 3 3 LEU LEU B . B 2 4 ILE 4 4 ILE ILE B . B 2 5 PRO 5 5 PRO PRO B . B 2 6 THR 6 6 THR THR B . B 2 7 VAL 7 7 VAL VAL B . B 2 8 ILE 8 8 ILE ILE B . B 2 9 GLU 9 9 GLU GLU B . B 2 10 GLN 10 10 GLN GLN B . B 2 11 THR 11 11 THR THR B . B 2 12 ASN 12 12 ASN ASN B . B 2 13 ARG 13 13 ARG ARG B . B 2 14 GLY 14 14 GLY GLY B . B 2 15 GLU 15 15 GLU GLU B . B 2 16 ARG 16 16 ARG ARG B . B 2 17 ALA 17 17 ALA ALA B . B 2 18 TYR 18 18 TYR TYR B . B 2 19 ASP 19 19 ASP ASP B . B 2 20 ILE 20 20 ILE ILE B . B 2 21 TYR 21 21 TYR TYR B . B 2 22 SER 22 22 SER SER B . B 2 23 ARG 23 23 ARG ARG B . B 2 24 LEU 24 24 LEU LEU B . B 2 25 LEU 25 25 LEU LEU B . B 2 26 LYS 26 26 LYS LYS B . B 2 27 ASP 27 27 ASP ASP B . B 2 28 ARG 28 28 ARG ARG B . B 2 29 ILE 29 29 ILE ILE B . B 2 30 ILE 30 30 ILE ILE B . B 2 31 MET 31 31 MET MET B . B 2 32 LEU 32 32 LEU LEU B . B 2 33 GLY 33 33 GLY GLY B . B 2 34 SER 34 34 SER SER B . B 2 35 ALA 35 35 ALA ALA B . B 2 36 ILE 36 36 ILE ILE B . B 2 37 ASP 37 37 ASP ASP B . B 2 38 ASP 38 38 ASP ASP B . B 2 39 ASN 39 39 ASN ASN B . B 2 40 VAL 40 40 VAL VAL B . B 2 41 ALA 41 41 ALA ALA B . B 2 42 ASN 42 42 ASN ASN B . B 2 43 SER 43 43 SER SER B . B 2 44 ILE 44 44 ILE ILE B . B 2 45 VAL 45 45 VAL VAL B . B 2 46 SER 46 46 SER SER B . B 2 47 GLN 47 47 GLN GLN B . B 2 48 LEU 48 48 LEU LEU B . B 2 49 LEU 49 49 LEU LEU B . B 2 50 PHE 50 50 PHE PHE B . B 2 51 LEU 51 51 LEU LEU B . B 2 52 ALA 52 52 ALA ALA B . B 2 53 ALA 53 53 ALA ALA B . B 2 54 GLU 54 54 GLU GLU B . B 2 55 ASP 55 55 ASP ASP B . B 2 56 PRO 56 56 PRO PRO B . B 2 57 GLU 57 57 GLU GLU B . B 2 58 LYS 58 58 LYS LYS B . B 2 59 GLU 59 59 GLU GLU B . B 2 60 ILE 60 60 ILE ILE B . B 2 61 SER 61 61 SER SER B . B 2 62 LEU 62 62 LEU LEU B . B 2 63 TYR 63 63 TYR TYR B . B 2 64 ILE 64 64 ILE ILE B . B 2 65 ASN 65 65 ASN ASN B . B 2 66 SER 66 66 SER SER B . B 2 67 PRO 67 67 PRO PRO B . B 2 68 GLY 68 68 GLY GLY B . B 2 69 GLY 69 69 GLY GLY B . B 2 70 SER 70 70 SER SER B . B 2 71 ILE 71 71 ILE ILE B . B 2 72 THR 72 72 THR THR B . B 2 73 ALA 73 73 ALA ALA B . B 2 74 GLY 74 74 GLY GLY B . B 2 75 MET 75 75 MET MET B . B 2 76 ALA 76 76 ALA ALA B . B 2 77 ILE 77 77 ILE ILE B . B 2 78 TYR 78 78 TYR TYR B . B 2 79 ASP 79 79 ASP ASP B . B 2 80 THR 80 80 THR THR B . B 2 81 MET 81 81 MET MET B . B 2 82 GLN 82 82 GLN GLN B . B 2 83 PHE 83 83 PHE PHE B . B 2 84 ILE 84 84 ILE ILE B . B 2 85 LYS 85 85 LYS LYS B . B 2 86 PRO 86 86 PRO PRO B . B 2 87 LYS 87 87 LYS LYS B . B 2 88 VAL 88 88 VAL VAL B . B 2 89 SER 89 89 SER SER B . B 2 90 THR 90 90 THR THR B . B 2 91 ILE 91 91 ILE ILE B . B 2 92 CYS 92 92 CYS CYS B . B 2 93 ILE 93 93 ILE ILE B . B 2 94 GLY 94 94 GLY GLY B . B 2 95 MET 95 95 MET MET B . B 2 96 ALA 96 96 ALA ALA B . B 2 97 ALA 97 97 ALA ALA B . B 2 98 SER 98 98 SER SER B . B 2 99 MET 99 99 MET MET B . B 2 100 GLY 100 100 GLY GLY B . B 2 101 ALA 101 101 ALA ALA B . B 2 102 PHE 102 102 PHE PHE B . B 2 103 LEU 103 103 LEU LEU B . B 2 104 LEU 104 104 LEU LEU B . B 2 105 ALA 105 105 ALA ALA B . B 2 106 ALA 106 106 ALA ALA B . B 2 107 GLY 107 107 GLY GLY B . B 2 108 GLU 108 108 GLU GLU B . B 2 109 LYS 109 109 LYS LYS B . B 2 110 GLY 110 110 GLY GLY B . B 2 111 LYS 111 111 LYS LYS B . B 2 112 ARG 112 112 ARG ARG B . B 2 113 TYR 113 113 TYR TYR B . B 2 114 ALA 114 114 ALA ALA B . B 2 115 LEU 115 115 LEU LEU B . B 2 116 PRO 116 116 PRO PRO B . B 2 117 ASN 117 117 ASN ASN B . B 2 118 SER 118 118 SER SER B . B 2 119 GLU 119 119 GLU GLU B . B 2 120 VAL 120 120 VAL VAL B . B 2 121 MET 121 121 MET MET B . B 2 122 ILE 122 122 ILE ILE B . B 2 123 HIS 123 123 HIS HIS B . B 2 124 GLN 124 124 GLN GLN B . B 2 125 PRO 125 125 PRO PRO B . B 2 126 LEU 126 126 LEU LEU B . B 2 127 GLY 127 127 GLY GLY B . B 2 128 GLY 128 128 GLY GLY B . B 2 129 ALA 129 129 ALA ALA B . B 2 130 GLN 130 130 GLN GLN B . B 2 131 GLY 131 131 GLY GLY B . B 2 132 GLN 132 132 GLN GLN B . B 2 133 ALA 133 133 ALA ALA B . B 2 134 THR 134 134 THR THR B . B 2 135 GLU 135 135 GLU GLU B . B 2 136 ILE 136 136 ILE ILE B . B 2 137 GLU 137 137 GLU GLU B . B 2 138 ILE 138 138 ILE ILE B . B 2 139 ALA 139 139 ALA ALA B . B 2 140 ALA 140 140 ALA ALA B . B 2 141 LYS 141 141 LYS LYS B . B 2 142 ARG 142 142 ARG ARG B . B 2 143 ILE 143 143 ILE ILE B . B 2 144 LEU 144 144 LEU LEU B . B 2 145 LEU 145 145 LEU LEU B . B 2 146 LEU 146 146 LEU LEU B . B 2 147 ARG 147 147 ARG ARG B . B 2 148 ASP 148 148 ASP ASP B . B 2 149 LYS 149 149 LYS LYS B . B 2 150 LEU 150 150 LEU LEU B . B 2 151 ASN 151 151 ASN ASN B . B 2 152 LYS 152 152 LYS LYS B . B 2 153 VAL 153 153 VAL VAL B . B 2 154 LEU 154 154 LEU LEU B . B 2 155 ALA 155 155 ALA ALA B . B 2 156 GLU 156 156 GLU GLU B . B 2 157 ARG 157 157 ARG ARG B . B 2 158 THR 158 158 THR THR B . B 2 159 GLY 159 159 GLY GLY B . B 2 160 GLN 160 160 GLN GLN B . B 2 161 PRO 161 161 PRO PRO B . B 2 162 LEU 162 162 LEU LEU B . B 2 163 GLU 163 163 GLU GLU B . B 2 164 VAL 164 164 VAL VAL B . B 2 165 ILE 165 165 ILE ILE B . B 2 166 GLU 166 166 GLU GLU B . B 2 167 ARG 167 167 ARG ARG B . B 2 168 ASP 168 168 ASP ASP B . B 2 169 THR 169 169 THR THR B . B 2 170 ASP 170 170 ASP ASP B . B 2 171 ARG 171 171 ARG ARG B . B 2 172 ASP 172 172 ASP ASP B . B 2 173 ASN 173 173 ASN ASN B . B 2 174 PHE 174 174 PHE PHE B . B 2 175 LYS 175 175 LYS LYS B . B 2 176 SER 176 176 SER SER B . B 2 177 ALA 177 177 ALA ALA B . B 2 178 GLU 178 178 GLU GLU B . B 2 179 GLU 179 179 GLU GLU B . B 2 180 ALA 180 180 ALA ALA B . B 2 181 LEU 181 181 LEU LEU B . B 2 182 GLU 182 182 GLU GLU B . B 2 183 TYR 183 183 TYR TYR B . B 2 184 GLY 184 184 GLY GLY B . B 2 185 LEU 185 185 LEU LEU B . B 2 186 ILE 186 186 ILE ILE B . B 2 187 ASP 187 187 ASP ASP B . B 2 188 LYS 188 188 LYS LYS B . B 2 189 ILE 189 189 ILE ILE B . B 2 190 LEU 190 190 LEU LEU B . B 2 191 THR 191 191 THR THR B . B 2 192 HIS 192 192 HIS HIS B . B 2 193 THR 193 193 THR THR B . B 2 194 GLU 194 194 GLU GLU B . B 2 195 ASP 195 195 ASP ASP B . B 2 196 LYS 196 196 LYS LYS B . B 2 197 LYS 197 197 LYS LYS B . # # loop_ # #