data_9A8C # _entry.id 9A8C # loop_ _atom_type.symbol C N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Joron, K." 1 "Zamel, J." 2 "Kalisman, N." 3 "Lerner, E." 4 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000377 PDBDEV_00000377 ? PDB 9A8C pdb_00009a8c 10.2210/pdb9a8c/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A8C _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-03-12 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # loop_ _citation.country _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_issue _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year . 1 iScience . . 2589-0042 . . . . 10.1016/j.isci.2024.110140 . "Evidence for a compact sigma70 conformation in vitro and in vivo" 2024 . 2 "Algorithms in Bioinformatics" . . . . . . . doi.org/10.1007/3-540-45784-4_14 . "Efficient Unbound Docking of Rigid Molecules" 2002 . 3 "Nucleic Acids Research" . . . . 33 . . doi.org/10.1093/nar/gki481 . "PatchDock and SymmDock: servers for rigid and symmetric docking" 2005 . 4 "Protein Science" . . . . 32 . . doi.org/10.1002/pro.4792 . "UCSF ChimeraX: Tools for structure building and analysis" 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Joron, K." 1 1 "Zamel, J." 2 1 "Kalisman, N." 3 1 "Lerner, E." 4 2 "Duhovny, D." 5 2 "Nussinov, R." 6 2 "Wolfson, H.J." 7 3 "Schneidman-Duhovny, D." 8 3 "Inbar, Y." 9 3 "Nussinov, R." 10 3 "Wolfson, H.J." 11 4 "Meng, E.C." 12 4 "Goddard, T.D." 13 4 "Pettersen, E.F." 14 4 "Couch, G.S." 15 4 "Pearson, Z.J." 16 4 "Morris, J.H." 17 4 "Ferrin, T.E." 18 # _entity.details . _entity.formula_weight 71368.664 _entity.id 1 _entity.pdbx_description "RNA polymerase sigma factor RpoD" _entity.pdbx_number_of_molecules 1 _entity.src_method MAN _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code EAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD _entity_poly.pdbx_seq_one_letter_code_can EAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . GLU 1 1 . ALA 2 1 . ALA 3 1 . ALA 4 1 . GLN 5 1 . VAL 6 1 . LEU 7 1 . SER 8 1 . SER 9 1 . VAL 10 1 . GLU 11 1 . SER 12 1 . GLU 13 1 . ILE 14 1 . GLY 15 1 . ARG 16 1 . THR 17 1 . THR 18 1 . ASP 19 1 . PRO 20 1 . VAL 21 1 . ARG 22 1 . MET 23 1 . TYR 24 1 . MET 25 1 . ARG 26 1 . GLU 27 1 . MET 28 1 . GLY 29 1 . THR 30 1 . VAL 31 1 . GLU 32 1 . LEU 33 1 . LEU 34 1 . THR 35 1 . ARG 36 1 . GLU 37 1 . GLY 38 1 . GLU 39 1 . ILE 40 1 . ASP 41 1 . ILE 42 1 . ALA 43 1 . LYS 44 1 . ARG 45 1 . ILE 46 1 . GLU 47 1 . ASP 48 1 . GLY 49 1 . ILE 50 1 . ASN 51 1 . GLN 52 1 . VAL 53 1 . GLN 54 1 . CYS 55 1 . SER 56 1 . VAL 57 1 . ALA 58 1 . GLU 59 1 . TYR 60 1 . PRO 61 1 . GLU 62 1 . ALA 63 1 . ILE 64 1 . THR 65 1 . TYR 66 1 . LEU 67 1 . LEU 68 1 . GLU 69 1 . GLN 70 1 . TYR 71 1 . ASP 72 1 . ARG 73 1 . VAL 74 1 . GLU 75 1 . ALA 76 1 . GLU 77 1 . GLU 78 1 . ALA 79 1 . ARG 80 1 . LEU 81 1 . SER 82 1 . ASP 83 1 . LEU 84 1 . ILE 85 1 . THR 86 1 . GLY 87 1 . PHE 88 1 . VAL 89 1 . ASP 90 1 . PRO 91 1 . ASN 92 1 . ALA 93 1 . GLU 94 1 . GLU 95 1 . ASP 96 1 . LEU 97 1 . ALA 98 1 . PRO 99 1 . THR 100 1 . ALA 101 1 . THR 102 1 . HIS 103 1 . VAL 104 1 . GLY 105 1 . SER 106 1 . GLU 107 1 . LEU 108 1 . SER 109 1 . GLN 110 1 . GLU 111 1 . ASP 112 1 . LEU 113 1 . ASP 114 1 . ASP 115 1 . ASP 116 1 . GLU 117 1 . ASP 118 1 . GLU 119 1 . ASP 120 1 . GLU 121 1 . GLU 122 1 . ASP 123 1 . GLY 124 1 . ASP 125 1 . ASP 126 1 . ASP 127 1 . SER 128 1 . ALA 129 1 . ASP 130 1 . ASP 131 1 . ASP 132 1 . ASN 133 1 . SER 134 1 . ILE 135 1 . ASP 136 1 . PRO 137 1 . GLU 138 1 . LEU 139 1 . ALA 140 1 . ARG 141 1 . GLU 142 1 . LYS 143 1 . PHE 144 1 . ALA 145 1 . GLU 146 1 . LEU 147 1 . ARG 148 1 . ALA 149 1 . GLN 150 1 . TYR 151 1 . VAL 152 1 . VAL 153 1 . THR 154 1 . ARG 155 1 . ASP 156 1 . THR 157 1 . ILE 158 1 . LYS 159 1 . ALA 160 1 . LYS 161 1 . GLY 162 1 . ARG 163 1 . SER 164 1 . HIS 165 1 . ALA 166 1 . THR 167 1 . ALA 168 1 . GLN 169 1 . GLU 170 1 . GLU 171 1 . ILE 172 1 . LEU 173 1 . LYS 174 1 . LEU 175 1 . SER 176 1 . GLU 177 1 . VAL 178 1 . PHE 179 1 . LYS 180 1 . GLN 181 1 . PHE 182 1 . ARG 183 1 . LEU 184 1 . VAL 185 1 . PRO 186 1 . LYS 187 1 . GLN 188 1 . PHE 189 1 . ASP 190 1 . TYR 191 1 . LEU 192 1 . VAL 193 1 . ASN 194 1 . SER 195 1 . MET 196 1 . ARG 197 1 . VAL 198 1 . MET 199 1 . MET 200 1 . ASP 201 1 . ARG 202 1 . VAL 203 1 . ARG 204 1 . THR 205 1 . GLN 206 1 . GLU 207 1 . ARG 208 1 . LEU 209 1 . ILE 210 1 . MET 211 1 . LYS 212 1 . LEU 213 1 . CYS 214 1 . VAL 215 1 . GLU 216 1 . GLN 217 1 . CYS 218 1 . LYS 219 1 . MET 220 1 . PRO 221 1 . LYS 222 1 . LYS 223 1 . ASN 224 1 . PHE 225 1 . ILE 226 1 . THR 227 1 . LEU 228 1 . PHE 229 1 . THR 230 1 . GLY 231 1 . ASN 232 1 . GLU 233 1 . THR 234 1 . SER 235 1 . ASP 236 1 . THR 237 1 . TRP 238 1 . PHE 239 1 . ASN 240 1 . ALA 241 1 . ALA 242 1 . ILE 243 1 . ALA 244 1 . MET 245 1 . ASN 246 1 . LYS 247 1 . PRO 248 1 . TRP 249 1 . SER 250 1 . GLU 251 1 . LYS 252 1 . LEU 253 1 . HIS 254 1 . ASP 255 1 . VAL 256 1 . SER 257 1 . GLU 258 1 . GLU 259 1 . VAL 260 1 . HIS 261 1 . ARG 262 1 . ALA 263 1 . LEU 264 1 . GLN 265 1 . LYS 266 1 . LEU 267 1 . GLN 268 1 . GLN 269 1 . ILE 270 1 . GLU 271 1 . GLU 272 1 . GLU 273 1 . THR 274 1 . GLY 275 1 . LEU 276 1 . THR 277 1 . ILE 278 1 . GLU 279 1 . GLN 280 1 . VAL 281 1 . LYS 282 1 . ASP 283 1 . ILE 284 1 . ASN 285 1 . ARG 286 1 . ARG 287 1 . MET 288 1 . SER 289 1 . ILE 290 1 . GLY 291 1 . GLU 292 1 . ALA 293 1 . LYS 294 1 . ALA 295 1 . ARG 296 1 . ARG 297 1 . ALA 298 1 . LYS 299 1 . LYS 300 1 . GLU 301 1 . MET 302 1 . VAL 303 1 . GLU 304 1 . ALA 305 1 . ASN 306 1 . LEU 307 1 . ARG 308 1 . LEU 309 1 . VAL 310 1 . ILE 311 1 . SER 312 1 . ILE 313 1 . ALA 314 1 . LYS 315 1 . LYS 316 1 . TYR 317 1 . THR 318 1 . ASN 319 1 . ARG 320 1 . GLY 321 1 . LEU 322 1 . GLN 323 1 . PHE 324 1 . LEU 325 1 . ASP 326 1 . LEU 327 1 . ILE 328 1 . GLN 329 1 . GLU 330 1 . GLY 331 1 . ASN 332 1 . ILE 333 1 . GLY 334 1 . LEU 335 1 . MET 336 1 . LYS 337 1 . ALA 338 1 . VAL 339 1 . ASP 340 1 . LYS 341 1 . PHE 342 1 . GLU 343 1 . TYR 344 1 . ARG 345 1 . ARG 346 1 . GLY 347 1 . TYR 348 1 . LYS 349 1 . PHE 350 1 . SER 351 1 . THR 352 1 . TYR 353 1 . ALA 354 1 . THR 355 1 . TRP 356 1 . TRP 357 1 . ILE 358 1 . ARG 359 1 . GLN 360 1 . ALA 361 1 . ILE 362 1 . THR 363 1 . ARG 364 1 . SER 365 1 . ILE 366 1 . ALA 367 1 . ASP 368 1 . GLN 369 1 . ALA 370 1 . ARG 371 1 . THR 372 1 . ILE 373 1 . ARG 374 1 . ILE 375 1 . PRO 376 1 . VAL 377 1 . HIS 378 1 . MET 379 1 . ILE 380 1 . GLU 381 1 . THR 382 1 . ILE 383 1 . ASN 384 1 . LYS 385 1 . LEU 386 1 . ASN 387 1 . ARG 388 1 . ILE 389 1 . SER 390 1 . ARG 391 1 . GLN 392 1 . MET 393 1 . LEU 394 1 . GLN 395 1 . GLU 396 1 . MET 397 1 . GLY 398 1 . ARG 399 1 . GLU 400 1 . PRO 401 1 . THR 402 1 . PRO 403 1 . GLU 404 1 . GLU 405 1 . LEU 406 1 . ALA 407 1 . GLU 408 1 . ARG 409 1 . MET 410 1 . LEU 411 1 . MET 412 1 . PRO 413 1 . GLU 414 1 . ASP 415 1 . LYS 416 1 . ILE 417 1 . ARG 418 1 . LYS 419 1 . VAL 420 1 . LEU 421 1 . LYS 422 1 . ILE 423 1 . ALA 424 1 . LYS 425 1 . GLU 426 1 . PRO 427 1 . ILE 428 1 . SER 429 1 . MET 430 1 . GLU 431 1 . THR 432 1 . PRO 433 1 . ILE 434 1 . GLY 435 1 . ASP 436 1 . ASP 437 1 . GLU 438 1 . ASP 439 1 . SER 440 1 . HIS 441 1 . LEU 442 1 . GLY 443 1 . ASP 444 1 . PHE 445 1 . ILE 446 1 . GLU 447 1 . ASP 448 1 . THR 449 1 . THR 450 1 . LEU 451 1 . GLU 452 1 . LEU 453 1 . PRO 454 1 . LEU 455 1 . ASP 456 1 . SER 457 1 . ALA 458 1 . THR 459 1 . THR 460 1 . GLU 461 1 . SER 462 1 . LEU 463 1 . ARG 464 1 . ALA 465 1 . ALA 466 1 . THR 467 1 . HIS 468 1 . ASP 469 1 . VAL 470 1 . LEU 471 1 . ALA 472 1 . GLY 473 1 . LEU 474 1 . THR 475 1 . ALA 476 1 . ARG 477 1 . GLU 478 1 . ALA 479 1 . LYS 480 1 . VAL 481 1 . LEU 482 1 . ARG 483 1 . MET 484 1 . ARG 485 1 . PHE 486 1 . GLY 487 1 . ILE 488 1 . ASP 489 1 . MET 490 1 . ASN 491 1 . THR 492 1 . ASP 493 1 . TYR 494 1 . THR 495 1 . LEU 496 1 . GLU 497 1 . GLU 498 1 . VAL 499 1 . GLY 500 1 . LYS 501 1 . GLN 502 1 . PHE 503 1 . ASP 504 1 . VAL 505 1 . THR 506 1 . ARG 507 1 . GLU 508 1 . ARG 509 1 . ILE 510 1 . ARG 511 1 . GLN 512 1 . ILE 513 1 . GLU 514 1 . ALA 515 1 . LYS 516 1 . ALA 517 1 . LEU 518 1 . ARG 519 1 . LYS 520 1 . LEU 521 1 . ARG 522 1 . HIS 523 1 . PRO 524 1 . SER 525 1 . ARG 526 1 . SER 527 1 . GLU 528 1 . VAL 529 1 . LEU 530 1 . ARG 531 1 . SER 532 1 . PHE 533 1 . LEU 534 1 . ASP 535 1 . ASP 536 # loop_ _ihm_chemical_component_descriptor.auth_name _ihm_chemical_component_descriptor.chemical_name _ihm_chemical_component_descriptor.common_name _ihm_chemical_component_descriptor.details _ihm_chemical_component_descriptor.id _ihm_chemical_component_descriptor.inchi _ihm_chemical_component_descriptor.inchi_key _ihm_chemical_component_descriptor.smiles _ihm_chemical_component_descriptor.smiles_canonical BS3 Bis(sulfosuccinimidyl)suberate BS3 . 1 1S/C16H20N2O14S2/c19-11-7-9(33(25,26)27)15(23)17(11)31-13(21)5-3-1-2-4-6-14(22)32-18-12(20)8-10(16(18)24)34(28,29)30/h9-10H,1-8H2,(H,25,26,27)(H,28,29,30) VYLDEYYOISNGST-UHFFFAOYSA-N . C1C(C(=O)N(C1=O)OC(=O)CCCCCCC(=O)ON2C(=O)CC(C2=O)S(=O)(=O)O)S(=O)(=O)O DMTMM "4-(4,6-Dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride" DMTMM . 2 1S/C10H17N4O3.ClH/c1-14(4-6-17-7-5-14)8-11-9(15-2)13-10(12-8)16-3;/h4-7H2,1-3H3;1H/q+1;/p-1 BMTZEAOGFDXDAD-UHFFFAOYSA-M . C[N+]1(CCOCC1)C2=NC(=NC(=N2)OC)OC.[Cl-] # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 1 1 BS3 143 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 2 1 BS3 385 480 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 3 1 BS3 294 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 4 1 BS3 143 174 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 5 1 BS3 44 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 6 1 BS3 294 299 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 7 1 BS3 385 416 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 8 1 BS3 180 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 9 1 BS3 143 187 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 10 1 BS3 187 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 11 1 BS3 385 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 12 1 BS3 180 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 13 1 BS3 180 187 LYS THR 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 14 1 BS3 161 167 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 15 1 BS3 44 180 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 16 1 BS3 44 187 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 17 1 BS3 159 187 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 18 1 BS3 159 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 19 1 BS3 143 416 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 20 1 BS3 187 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 21 1 BS3 44 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 22 1 BS3 143 180 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 23 1 BS3 44 349 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 24 1 BS3 300 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 25 1 BS3 187 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 26 1 BS3 187 341 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 27 1 BS3 44 161 LYS SER 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 28 1 BS3 385 527 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 29 1 BS3 341 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 30 1 BS3 385 419 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 31 1 BS3 159 174 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 32 1 BS3 501 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 33 1 BS3 300 501 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 34 1 BS3 294 300 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 35 1 BS3 385 501 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 36 1 BS3 266 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 37 1 BS3 212 266 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 38 1 BS3 159 501 TYR LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 39 1 BS3 494 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 40 1 BS3 266 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 41 1 BS3 266 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 42 1 BS3 44 501 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 43 1 BS3 315 516 LYS SER 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 44 1 BS3 161 164 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 45 1 BS3 416 480 LYS SER 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 46 1 BS3 44 164 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 47 1 BS3 316 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 48 1 BS3 174 187 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 49 1 BS3 300 480 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 50 1 BS3 300 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 51 1 BS3 159 385 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 52 1 BS3 143 294 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 53 1 BS3 516 520 TYR LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 54 1 BS3 151 159 SER LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 55 1 BS3 164 416 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 56 1 BS3 419 480 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 57 1 BS3 294 501 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 58 1 BS3 159 180 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 59 1 BS3 180 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 60 1 BS3 187 419 LYS TYR 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 61 1 BS3 416 494 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 62 1 BS3 187 300 LYS SER 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 63 1 BS3 300 527 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 64 1 BS3 44 143 TYR LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 65 1 BS3 151 180 LYS SER 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 66 1 BS3 143 176 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 67 1 BS3 419 516 LYS LYS 1 "30 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 1 68 1 BS3 416 516 ASP LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 69 2 Other 469 480 LYS GLU 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 70 2 Other 159 258 LYS GLU 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 71 2 Other 385 414 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 72 2 Other 315 469 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 73 2 Other 385 469 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 74 2 Other 266 536 GLU SER 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 75 2 Other 330 365 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 76 2 Other 27 294 ASP LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 77 2 Other 469 516 GLU SER 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 78 2 Other 27 312 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 79 2 Other 385 536 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 80 2 Other 299 536 ASP LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 81 2 Other 368 385 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 82 2 Other 416 469 ASP LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 83 2 Other 19 299 LYS GLU 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 84 2 Other 159 170 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 85 2 Other 75 180 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 86 2 Other 219 255 LYS ASP 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 87 2 Other 416 536 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 88 2 Other 32 349 ASP LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 89 2 Other 48 294 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 90 2 Other 32 385 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 91 2 Other 170 480 GLU LYS 1 "16 A cutoff Ca-Ca distance" "RNA polymerase sigma factor RpoD" "RNA polymerase sigma factor RpoD" 1 1 2 92 2 Other 272 516 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . LYS LYS ANY 30 1 1 1 1 by-residue . . "upper bound" 143 385 . . A A . . LYS LYS ANY 30 1 1 1 2 by-residue . . "upper bound" 385 480 . . A A . . LYS LYS ANY 30 1 1 1 3 by-residue . . "upper bound" 294 385 . . A A . . LYS LYS ANY 30 1 1 1 4 by-residue . . "upper bound" 143 174 . . A A . . LYS LYS ANY 30 1 1 1 5 by-residue . . "upper bound" 44 294 . . A A . . LYS LYS ANY 30 1 1 1 6 by-residue . . "upper bound" 294 299 . . A A . . LYS LYS ANY 30 1 1 1 7 by-residue . . "upper bound" 385 416 . . A A . . LYS LYS ANY 30 1 1 1 8 by-residue . . "upper bound" 180 385 . . A A . . LYS LYS ANY 30 1 1 1 9 by-residue . . "upper bound" 143 187 . . A A . . LYS LYS ANY 30 1 1 1 10 by-residue . . "upper bound" 187 385 . . A A . . LYS LYS ANY 30 1 1 1 11 by-residue . . "upper bound" 385 516 . . A A . . LYS LYS ANY 30 1 1 1 12 by-residue . . "upper bound" 180 294 . . A A . . LYS LYS ANY 30 1 1 1 13 by-residue . . "upper bound" 180 187 . . A A . . LYS THR ANY 30 1 1 1 14 by-residue . . "upper bound" 161 167 . . A A . . LYS LYS ANY 30 1 1 1 15 by-residue . . "upper bound" 44 180 . . A A . . LYS LYS ANY 30 1 1 1 16 by-residue . . "upper bound" 44 187 . . A A . . LYS LYS ANY 30 1 1 1 17 by-residue . . "upper bound" 159 187 . . A A . . LYS LYS ANY 30 1 1 1 18 by-residue . . "upper bound" 159 294 . . A A . . LYS LYS ANY 30 1 1 1 19 by-residue . . "upper bound" 143 416 . . A A . . LYS LYS ANY 30 1 1 1 20 by-residue . . "upper bound" 187 516 . . A A . . LYS LYS ANY 30 1 1 1 21 by-residue . . "upper bound" 44 385 . . A A . . LYS LYS ANY 30 1 1 1 22 by-residue . . "upper bound" 143 180 . . A A . . LYS LYS ANY 30 1 1 1 23 by-residue . . "upper bound" 44 349 . . A A . . LYS LYS ANY 30 1 1 1 24 by-residue . . "upper bound" 300 385 . . A A . . LYS LYS ANY 30 1 1 1 25 by-residue . . "upper bound" 187 294 . . A A . . LYS LYS ANY 30 1 1 1 26 by-residue . . "upper bound" 187 341 . . A A . . LYS LYS ANY 30 1 1 1 27 by-residue . . "upper bound" 44 161 . . A A . . LYS SER ANY 30 1 1 1 28 by-residue . . "upper bound" 385 527 . . A A . . LYS LYS ANY 30 1 1 1 29 by-residue . . "upper bound" 341 385 . . A A . . LYS LYS ANY 30 1 1 1 30 by-residue . . "upper bound" 385 419 . . A A . . LYS LYS ANY 30 1 1 1 31 by-residue . . "upper bound" 159 174 . . A A . . LYS LYS ANY 30 1 1 1 32 by-residue . . "upper bound" 501 516 . . A A . . LYS LYS ANY 30 1 1 1 33 by-residue . . "upper bound" 300 501 . . A A . . LYS LYS ANY 30 1 1 1 34 by-residue . . "upper bound" 294 300 . . A A . . LYS LYS ANY 30 1 1 1 35 by-residue . . "upper bound" 385 501 . . A A . . LYS LYS ANY 30 1 1 1 36 by-residue . . "upper bound" 266 516 . . A A . . LYS LYS ANY 30 1 1 1 37 by-residue . . "upper bound" 212 266 . . A A . . LYS LYS ANY 30 1 1 1 38 by-residue . . "upper bound" 159 501 . . A A . . TYR LYS ANY 30 1 1 1 39 by-residue . . "upper bound" 494 516 . . A A . . LYS LYS ANY 30 1 1 1 40 by-residue . . "upper bound" 266 294 . . A A . . LYS LYS ANY 30 1 1 1 41 by-residue . . "upper bound" 266 385 . . A A . . LYS LYS ANY 30 1 1 1 42 by-residue . . "upper bound" 44 501 . . A A . . LYS LYS ANY 30 1 1 1 43 by-residue . . "upper bound" 315 516 . . A A . . LYS SER ANY 30 1 1 1 44 by-residue . . "upper bound" 161 164 . . A A . . LYS LYS ANY 30 1 1 1 45 by-residue . . "upper bound" 416 480 . . A A . . LYS SER ANY 30 1 1 1 46 by-residue . . "upper bound" 44 164 . . A A . . LYS LYS ANY 30 1 1 1 47 by-residue . . "upper bound" 316 385 . . A A . . LYS LYS ANY 30 1 1 1 48 by-residue . . "upper bound" 174 187 . . A A . . LYS LYS ANY 30 1 1 1 49 by-residue . . "upper bound" 300 480 . . A A . . LYS LYS ANY 30 1 1 1 50 by-residue . . "upper bound" 300 516 . . A A . . LYS LYS ANY 30 1 1 1 51 by-residue . . "upper bound" 159 385 . . A A . . LYS LYS ANY 30 1 1 1 52 by-residue . . "upper bound" 143 294 . . A A . . LYS LYS ANY 30 1 1 1 53 by-residue . . "upper bound" 516 520 . . A A . . TYR LYS ANY 30 1 1 1 54 by-residue . . "upper bound" 151 159 . . A A . . SER LYS ANY 30 1 1 1 55 by-residue . . "upper bound" 164 416 . . A A . . LYS LYS ANY 30 1 1 1 56 by-residue . . "upper bound" 419 480 . . A A . . LYS LYS ANY 30 1 1 1 57 by-residue . . "upper bound" 294 501 . . A A . . LYS LYS ANY 30 1 1 1 58 by-residue . . "upper bound" 159 180 . . A A . . LYS LYS ANY 30 1 1 1 59 by-residue . . "upper bound" 180 516 . . A A . . LYS LYS ANY 30 1 1 1 60 by-residue . . "upper bound" 187 419 . . A A . . LYS TYR ANY 30 1 1 1 61 by-residue . . "upper bound" 416 494 . . A A . . LYS LYS ANY 30 1 1 1 62 by-residue . . "upper bound" 187 300 . . A A . . LYS SER ANY 30 1 1 1 63 by-residue . . "upper bound" 300 527 . . A A . . LYS LYS ANY 30 1 1 1 64 by-residue . . "upper bound" 44 143 . . A A . . TYR LYS ANY 30 1 1 1 65 by-residue . . "upper bound" 151 180 . . A A . . LYS SER ANY 30 1 1 1 66 by-residue . . "upper bound" 143 176 . . A A . . LYS LYS ANY 30 1 1 1 67 by-residue . . "upper bound" 419 516 . . A A . . LYS LYS ANY 30 1 1 1 68 by-residue . . "upper bound" 416 516 . . A A . . ASP LYS ANY 16 1 1 1 69 by-residue . . "upper bound" 469 480 . . A A . . LYS GLU ANY 16 1 1 1 70 by-residue . . "upper bound" 159 258 . . A A . . LYS GLU ANY 16 1 1 1 71 by-residue . . "upper bound" 385 414 . . A A . . LYS ASP ANY 16 1 1 1 72 by-residue . . "upper bound" 315 469 . . A A . . LYS ASP ANY 16 1 1 1 73 by-residue . . "upper bound" 385 469 . . A A . . LYS ASP ANY 16 1 1 1 74 by-residue . . "upper bound" 266 536 . . A A . . GLU SER ANY 16 1 1 1 75 by-residue . . "upper bound" 330 365 . . A A . . GLU LYS ANY 16 1 1 1 76 by-residue . . "upper bound" 27 294 . . A A . . ASP LYS ANY 16 1 1 1 77 by-residue . . "upper bound" 469 516 . . A A . . GLU SER ANY 16 1 1 1 78 by-residue . . "upper bound" 27 312 . . A A . . LYS ASP ANY 16 1 1 1 79 by-residue . . "upper bound" 385 536 . . A A . . LYS ASP ANY 16 1 1 1 80 by-residue . . "upper bound" 299 536 . . A A . . ASP LYS ANY 16 1 1 1 81 by-residue . . "upper bound" 368 385 . . A A . . LYS ASP ANY 16 1 1 1 82 by-residue . . "upper bound" 416 469 . . A A . . ASP LYS ANY 16 1 1 1 83 by-residue . . "upper bound" 19 299 . . A A . . LYS GLU ANY 16 1 1 1 84 by-residue . . "upper bound" 159 170 . . A A . . GLU LYS ANY 16 1 1 1 85 by-residue . . "upper bound" 75 180 . . A A . . LYS ASP ANY 16 1 1 1 86 by-residue . . "upper bound" 219 255 . . A A . . LYS ASP ANY 16 1 1 1 87 by-residue . . "upper bound" 416 536 . . A A . . GLU LYS ANY 16 1 1 1 88 by-residue . . "upper bound" 32 349 . . A A . . ASP LYS ANY 16 1 1 1 89 by-residue . . "upper bound" 48 294 . . A A . . GLU LYS ANY 16 1 1 1 90 by-residue . . "upper bound" 32 385 . . A A . . GLU LYS ANY 16 1 1 1 91 by-residue . . "upper bound" 170 480 . . A A . . GLU LYS ANY 16 1 1 1 92 by-residue . . "upper bound" 272 516 . . # loop_ _ihm_dataset_group.application _ihm_dataset_group.details _ihm_dataset_group.id _ihm_dataset_group.name restraint . 1 "CX-MS data" other "All inputs for docking" 2 . # loop_ _ihm_dataset_group_link.dataset_list_id _ihm_dataset_group_link.group_id 1 1 1 2 2 2 # loop_ _ihm_dataset_list.data_type _ihm_dataset_list.database_hosted _ihm_dataset_list.details _ihm_dataset_list.id "Crosslinking-MS data" YES PXD037183 1 "Experimental model" YES 6P1K 2 # loop_ _ihm_dataset_related_db_reference.accession_code _ihm_dataset_related_db_reference.dataset_list_id _ihm_dataset_related_db_reference.db_name _ihm_dataset_related_db_reference.details _ihm_dataset_related_db_reference.id _ihm_dataset_related_db_reference.version PXD037183 1 PRIDE "Mass spectrometry data from crosslinking experiments" 1 . 6P1K 2 PDB . 2 . # _ihm_entity_poly_segment.comp_id_begin GLU _ihm_entity_poly_segment.comp_id_end ASP _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 536 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description "RNA polymerase sigma factor RpoD" _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id 1 # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 3 _ihm_modeling_protocol.protocol_name modeling # loop_ _ihm_modeling_protocol_details.dataset_group_id _ihm_modeling_protocol_details.description _ihm_modeling_protocol_details.ensemble_flag _ihm_modeling_protocol_details.id _ihm_modeling_protocol_details.multi_scale_flag _ihm_modeling_protocol_details.multi_state_flag _ihm_modeling_protocol_details.num_models_begin _ihm_modeling_protocol_details.num_models_end _ihm_modeling_protocol_details.ordered_flag _ihm_modeling_protocol_details.protocol_id _ihm_modeling_protocol_details.script_file_id _ihm_modeling_protocol_details.software_id _ihm_modeling_protocol_details.step_id _ihm_modeling_protocol_details.step_method _ihm_modeling_protocol_details.step_name _ihm_modeling_protocol_details.struct_assembly_description _ihm_modeling_protocol_details.struct_assembly_id 2 . NO 1 NO NO . . NO 1 . 1 1 . Docking . 1 2 . NO 2 NO NO . . NO 1 . 1 2 . Docking . 1 2 . NO 3 NO NO . . NO 1 . 1 3 . Docking . 1 # _ihm_starting_model_details.asym_id A _ihm_starting_model_details.dataset_list_id 2 _ihm_starting_model_details.description "Sigma70 was isolated from the RNA polymerase holoenzyme complex " _ihm_starting_model_details.entity_description "RNA polymerase sigma factor RpoD" _ihm_starting_model_details.entity_id 1 _ihm_starting_model_details.entity_poly_segment_id 1 _ihm_starting_model_details.starting_model_auth_asym_id L _ihm_starting_model_details.starting_model_id 1 _ihm_starting_model_details.starting_model_sequence_offset -80 _ihm_starting_model_details.starting_model_source "experimental model" # _ihm_struct_assembly.description "Integrative structure of RNA polymerase sigma factor RpoD modeled using restraints from chemical cross linking mass spectrometry data" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "RNA polymerase sigma factor RpoD" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description "RNA polymerase sigma factor RpoD" _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # loop_ _software.citation_id _software.classification _software.description _software.location _software.name _software.pdbx_ordinal _software.type _software.version 3 Docking . https://bioinfo3d.cs.tau.ac.il/PatchDock/patchdock.html PatchDock 1 program 1.3 4 "Structure visualization and analysis" . https://www.cgl.ucsf.edu/chimerax/ ChimeraX 2 program 1.2.5 # _struct.entry_id 9A8C _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details "Cluster of four possible structure models" _struct.pdbx_model_type_details . _struct.title "Escherichia coli sigma70 in apo form" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details . _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code RPOD_ECOLI _struct_ref.db_name UNP _struct_ref.details . _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 78 _struct_ref.pdbx_db_accession P00579 _struct_ref.pdbx_seq_one_letter_code . # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 78 _struct_ref_seq.db_align_end 613 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 536 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 GLU 81 81 GLU GLU A . A 1 2 ALA 82 82 ALA ALA A . A 1 3 ALA 83 83 ALA ALA A . A 1 4 ALA 84 84 ALA ALA A . A 1 5 GLN 85 85 GLN GLN A . A 1 6 VAL 86 86 VAL VAL A . A 1 7 LEU 87 87 LEU LEU A . A 1 8 SER 88 88 SER SER A . A 1 9 SER 89 89 SER SER A . A 1 10 VAL 90 90 VAL VAL A . A 1 11 GLU 91 91 GLU GLU A . A 1 12 SER 92 92 SER SER A . A 1 13 GLU 93 93 GLU GLU A . A 1 14 ILE 94 94 ILE ILE A . A 1 15 GLY 95 95 GLY GLY A . A 1 16 ARG 96 96 ARG ARG A . A 1 17 THR 97 97 THR THR A . A 1 18 THR 98 98 THR THR A . A 1 19 ASP 99 99 ASP ASP A . A 1 20 PRO 100 100 PRO PRO A . A 1 21 VAL 101 101 VAL VAL A . A 1 22 ARG 102 102 ARG ARG A . A 1 23 MET 103 103 MET MET A . A 1 24 TYR 104 104 TYR TYR A . A 1 25 MET 105 105 MET MET A . A 1 26 ARG 106 106 ARG ARG A . A 1 27 GLU 107 107 GLU GLU A . A 1 28 MET 108 108 MET MET A . A 1 29 GLY 109 109 GLY GLY A . A 1 30 THR 110 110 THR THR A . A 1 31 VAL 111 111 VAL VAL A . A 1 32 GLU 112 112 GLU GLU A . A 1 33 LEU 113 113 LEU LEU A . A 1 34 LEU 114 114 LEU LEU A . A 1 35 THR 115 115 THR THR A . A 1 36 ARG 116 116 ARG ARG A . A 1 37 GLU 117 117 GLU GLU A . A 1 38 GLY 118 118 GLY GLY A . A 1 39 GLU 119 119 GLU GLU A . A 1 40 ILE 120 120 ILE ILE A . A 1 41 ASP 121 121 ASP ASP A . A 1 42 ILE 122 122 ILE ILE A . A 1 43 ALA 123 123 ALA ALA A . A 1 44 LYS 124 124 LYS LYS A . A 1 45 ARG 125 125 ARG ARG A . A 1 46 ILE 126 126 ILE ILE A . A 1 47 GLU 127 127 GLU GLU A . A 1 48 ASP 128 128 ASP ASP A . A 1 49 GLY 129 129 GLY GLY A . A 1 50 ILE 130 130 ILE ILE A . A 1 51 ASN 131 131 ASN ASN A . A 1 52 GLN 132 132 GLN GLN A . A 1 53 VAL 133 133 VAL VAL A . A 1 54 GLN 134 134 GLN GLN A . A 1 55 CYS 135 135 CYS CYS A . A 1 56 SER 136 136 SER SER A . A 1 57 VAL 137 137 VAL VAL A . A 1 58 ALA 138 138 ALA ALA A . A 1 59 GLU 139 139 GLU GLU A . A 1 60 TYR 140 140 TYR TYR A . A 1 61 PRO 141 141 PRO PRO A . A 1 62 GLU 142 142 GLU GLU A . A 1 63 ALA 143 143 ALA ALA A . A 1 64 ILE 144 144 ILE ILE A . A 1 65 THR 145 145 THR THR A . A 1 66 TYR 146 146 TYR TYR A . A 1 67 LEU 147 147 LEU LEU A . A 1 68 LEU 148 148 LEU LEU A . A 1 69 GLU 149 149 GLU GLU A . A 1 70 GLN 150 150 GLN GLN A . A 1 71 TYR 151 151 TYR TYR A . A 1 72 ASP 152 152 ASP ASP A . A 1 73 ARG 153 153 ARG ARG A . A 1 74 VAL 154 154 VAL VAL A . A 1 75 GLU 155 155 GLU GLU A . A 1 76 ALA 156 156 ALA ALA A . A 1 77 GLU 157 157 GLU GLU A . A 1 78 GLU 158 158 GLU GLU A . A 1 79 ALA 159 159 ALA ALA A . A 1 80 ARG 160 160 ARG ARG A . A 1 81 LEU 161 161 LEU LEU A . A 1 82 SER 162 162 SER SER A . A 1 83 ASP 163 163 ASP ASP A . A 1 84 LEU 164 164 LEU LEU A . A 1 85 ILE 165 165 ILE ILE A . A 1 86 THR 166 166 THR THR A . A 1 87 GLY 167 167 GLY GLY A . A 1 88 PHE 168 168 PHE PHE A . A 1 89 VAL 169 169 VAL VAL A . A 1 90 ASP 170 170 ASP ASP A . A 1 91 PRO 171 171 PRO PRO A . A 1 92 ASN 172 172 ASN ASN A . A 1 93 ALA 173 173 ALA ALA A . A 1 94 GLU 174 174 GLU GLU A . A 1 95 GLU 175 175 GLU GLU A . A 1 96 ASP 176 176 ASP ASP A . A 1 97 LEU 177 177 LEU LEU A . A 1 98 ALA 178 178 ALA ALA A . A 1 99 PRO 179 179 PRO PRO A . A 1 100 THR 180 180 THR THR A . A 1 101 ALA 181 181 ALA ALA A . A 1 102 THR 182 182 THR THR A . A 1 103 HIS 183 183 HIS HIS A . A 1 104 VAL 184 184 VAL VAL A . A 1 105 GLY 185 185 GLY GLY A . A 1 106 SER 186 186 SER SER A . A 1 107 GLU 187 187 GLU GLU A . A 1 108 LEU 188 188 LEU LEU A . A 1 109 SER 189 189 SER SER A . A 1 110 GLN 190 190 GLN GLN A . A 1 111 GLU 191 191 GLU GLU A . A 1 112 ASP 192 192 ASP ASP A . A 1 113 LEU 193 193 LEU LEU A . A 1 114 ASP 194 194 ASP ASP A . A 1 115 ASP 195 195 ASP ASP A . A 1 116 ASP 196 196 ASP ASP A . A 1 117 GLU 197 197 GLU GLU A . A 1 118 ASP 198 198 ASP ASP A . A 1 119 GLU 199 199 GLU GLU A . A 1 120 ASP 200 200 ASP ASP A . A 1 121 GLU 201 201 GLU GLU A . A 1 122 GLU 202 202 GLU GLU A . A 1 123 ASP 203 203 ASP ASP A . A 1 124 GLY 204 204 GLY GLY A . A 1 125 ASP 205 205 ASP ASP A . A 1 126 ASP 206 206 ASP ASP A . A 1 127 ASP 207 207 ASP ASP A . A 1 128 SER 208 208 SER SER A . A 1 129 ALA 209 209 ALA ALA A . A 1 130 ASP 210 210 ASP ASP A . A 1 131 ASP 211 211 ASP ASP A . A 1 132 ASP 212 212 ASP ASP A . A 1 133 ASN 213 213 ASN ASN A . A 1 134 SER 214 214 SER SER A . A 1 135 ILE 215 215 ILE ILE A . A 1 136 ASP 216 216 ASP ASP A . A 1 137 PRO 217 217 PRO PRO A . A 1 138 GLU 218 218 GLU GLU A . A 1 139 LEU 219 219 LEU LEU A . A 1 140 ALA 220 220 ALA ALA A . A 1 141 ARG 221 221 ARG ARG A . A 1 142 GLU 222 222 GLU GLU A . A 1 143 LYS 223 223 LYS LYS A . A 1 144 PHE 224 224 PHE PHE A . A 1 145 ALA 225 225 ALA ALA A . A 1 146 GLU 226 226 GLU GLU A . A 1 147 LEU 227 227 LEU LEU A . A 1 148 ARG 228 228 ARG ARG A . A 1 149 ALA 229 229 ALA ALA A . A 1 150 GLN 230 230 GLN GLN A . A 1 151 TYR 231 231 TYR TYR A . A 1 152 VAL 232 232 VAL VAL A . A 1 153 VAL 233 233 VAL VAL A . A 1 154 THR 234 234 THR THR A . A 1 155 ARG 235 235 ARG ARG A . A 1 156 ASP 236 236 ASP ASP A . A 1 157 THR 237 237 THR THR A . A 1 158 ILE 238 238 ILE ILE A . A 1 159 LYS 239 239 LYS LYS A . A 1 160 ALA 240 240 ALA ALA A . A 1 161 LYS 241 241 LYS LYS A . A 1 162 GLY 242 242 GLY GLY A . A 1 163 ARG 243 243 ARG ARG A . A 1 164 SER 244 244 SER SER A . A 1 165 HIS 245 245 HIS HIS A . A 1 166 ALA 246 246 ALA ALA A . A 1 167 THR 247 247 THR THR A . A 1 168 ALA 248 248 ALA ALA A . A 1 169 GLN 249 249 GLN GLN A . A 1 170 GLU 250 250 GLU GLU A . A 1 171 GLU 251 251 GLU GLU A . A 1 172 ILE 252 252 ILE ILE A . A 1 173 LEU 253 253 LEU LEU A . A 1 174 LYS 254 254 LYS LYS A . A 1 175 LEU 255 255 LEU LEU A . A 1 176 SER 256 256 SER SER A . A 1 177 GLU 257 257 GLU GLU A . A 1 178 VAL 258 258 VAL VAL A . A 1 179 PHE 259 259 PHE PHE A . A 1 180 LYS 260 260 LYS LYS A . A 1 181 GLN 261 261 GLN GLN A . A 1 182 PHE 262 262 PHE PHE A . A 1 183 ARG 263 263 ARG ARG A . A 1 184 LEU 264 264 LEU LEU A . A 1 185 VAL 265 265 VAL VAL A . A 1 186 PRO 266 266 PRO PRO A . A 1 187 LYS 267 267 LYS LYS A . A 1 188 GLN 268 268 GLN GLN A . A 1 189 PHE 269 269 PHE PHE A . A 1 190 ASP 270 270 ASP ASP A . A 1 191 TYR 271 271 TYR TYR A . A 1 192 LEU 272 272 LEU LEU A . A 1 193 VAL 273 273 VAL VAL A . A 1 194 ASN 274 274 ASN ASN A . A 1 195 SER 275 275 SER SER A . A 1 196 MET 276 276 MET MET A . A 1 197 ARG 277 277 ARG ARG A . A 1 198 VAL 278 278 VAL VAL A . A 1 199 MET 279 279 MET MET A . A 1 200 MET 280 280 MET MET A . A 1 201 ASP 281 281 ASP ASP A . A 1 202 ARG 282 282 ARG ARG A . A 1 203 VAL 283 283 VAL VAL A . A 1 204 ARG 284 284 ARG ARG A . A 1 205 THR 285 285 THR THR A . A 1 206 GLN 286 286 GLN GLN A . A 1 207 GLU 287 287 GLU GLU A . A 1 208 ARG 288 288 ARG ARG A . A 1 209 LEU 289 289 LEU LEU A . A 1 210 ILE 290 290 ILE ILE A . A 1 211 MET 291 291 MET MET A . A 1 212 LYS 292 292 LYS LYS A . A 1 213 LEU 293 293 LEU LEU A . A 1 214 CYS 294 294 CYS CYS A . A 1 215 VAL 295 295 VAL VAL A . A 1 216 GLU 296 296 GLU GLU A . A 1 217 GLN 297 297 GLN GLN A . A 1 218 CYS 298 298 CYS CYS A . A 1 219 LYS 299 299 LYS LYS A . A 1 220 MET 300 300 MET MET A . A 1 221 PRO 301 301 PRO PRO A . A 1 222 LYS 302 302 LYS LYS A . A 1 223 LYS 303 303 LYS LYS A . A 1 224 ASN 304 304 ASN ASN A . A 1 225 PHE 305 305 PHE PHE A . A 1 226 ILE 306 306 ILE ILE A . A 1 227 THR 307 307 THR THR A . A 1 228 LEU 308 308 LEU LEU A . A 1 229 PHE 309 309 PHE PHE A . A 1 230 THR 310 310 THR THR A . A 1 231 GLY 311 311 GLY GLY A . A 1 232 ASN 312 312 ASN ASN A . A 1 233 GLU 313 313 GLU GLU A . A 1 234 THR 314 314 THR THR A . A 1 235 SER 315 315 SER SER A . A 1 236 ASP 316 316 ASP ASP A . A 1 237 THR 317 317 THR THR A . A 1 238 TRP 318 318 TRP TRP A . A 1 239 PHE 319 319 PHE PHE A . A 1 240 ASN 320 320 ASN ASN A . A 1 241 ALA 321 321 ALA ALA A . A 1 242 ALA 322 322 ALA ALA A . A 1 243 ILE 323 323 ILE ILE A . A 1 244 ALA 324 324 ALA ALA A . A 1 245 MET 325 325 MET MET A . A 1 246 ASN 326 326 ASN ASN A . A 1 247 LYS 327 327 LYS LYS A . A 1 248 PRO 328 328 PRO PRO A . A 1 249 TRP 329 329 TRP TRP A . A 1 250 SER 330 330 SER SER A . A 1 251 GLU 331 331 GLU GLU A . A 1 252 LYS 332 332 LYS LYS A . A 1 253 LEU 333 333 LEU LEU A . A 1 254 HIS 334 334 HIS HIS A . A 1 255 ASP 335 335 ASP ASP A . A 1 256 VAL 336 336 VAL VAL A . A 1 257 SER 337 337 SER SER A . A 1 258 GLU 338 338 GLU GLU A . A 1 259 GLU 339 339 GLU GLU A . A 1 260 VAL 340 340 VAL VAL A . A 1 261 HIS 341 341 HIS HIS A . A 1 262 ARG 342 342 ARG ARG A . A 1 263 ALA 343 343 ALA ALA A . A 1 264 LEU 344 344 LEU LEU A . A 1 265 GLN 345 345 GLN GLN A . A 1 266 LYS 346 346 LYS LYS A . A 1 267 LEU 347 347 LEU LEU A . A 1 268 GLN 348 348 GLN GLN A . A 1 269 GLN 349 349 GLN GLN A . A 1 270 ILE 350 350 ILE ILE A . A 1 271 GLU 351 351 GLU GLU A . A 1 272 GLU 352 352 GLU GLU A . A 1 273 GLU 353 353 GLU GLU A . A 1 274 THR 354 354 THR THR A . A 1 275 GLY 355 355 GLY GLY A . A 1 276 LEU 356 356 LEU LEU A . A 1 277 THR 357 357 THR THR A . A 1 278 ILE 358 358 ILE ILE A . A 1 279 GLU 359 359 GLU GLU A . A 1 280 GLN 360 360 GLN GLN A . A 1 281 VAL 361 361 VAL VAL A . A 1 282 LYS 362 362 LYS LYS A . A 1 283 ASP 363 363 ASP ASP A . A 1 284 ILE 364 364 ILE ILE A . A 1 285 ASN 365 365 ASN ASN A . A 1 286 ARG 366 366 ARG ARG A . A 1 287 ARG 367 367 ARG ARG A . A 1 288 MET 368 368 MET MET A . A 1 289 SER 369 369 SER SER A . A 1 290 ILE 370 370 ILE ILE A . A 1 291 GLY 371 371 GLY GLY A . A 1 292 GLU 372 372 GLU GLU A . A 1 293 ALA 373 373 ALA ALA A . A 1 294 LYS 374 374 LYS LYS A . A 1 295 ALA 375 375 ALA ALA A . A 1 296 ARG 376 376 ARG ARG A . A 1 297 ARG 377 377 ARG ARG A . A 1 298 ALA 378 378 ALA ALA A . A 1 299 LYS 379 379 LYS LYS A . A 1 300 LYS 380 380 LYS LYS A . A 1 301 GLU 381 381 GLU GLU A . A 1 302 MET 382 382 MET MET A . A 1 303 VAL 383 383 VAL VAL A . A 1 304 GLU 384 384 GLU GLU A . A 1 305 ALA 385 385 ALA ALA A . A 1 306 ASN 386 386 ASN ASN A . A 1 307 LEU 387 387 LEU LEU A . A 1 308 ARG 388 388 ARG ARG A . A 1 309 LEU 389 389 LEU LEU A . A 1 310 VAL 390 390 VAL VAL A . A 1 311 ILE 391 391 ILE ILE A . A 1 312 SER 392 392 SER SER A . A 1 313 ILE 393 393 ILE ILE A . A 1 314 ALA 394 394 ALA ALA A . A 1 315 LYS 395 395 LYS LYS A . A 1 316 LYS 396 396 LYS LYS A . A 1 317 TYR 397 397 TYR TYR A . A 1 318 THR 398 398 THR THR A . A 1 319 ASN 399 399 ASN ASN A . A 1 320 ARG 400 400 ARG ARG A . A 1 321 GLY 401 401 GLY GLY A . A 1 322 LEU 402 402 LEU LEU A . A 1 323 GLN 403 403 GLN GLN A . A 1 324 PHE 404 404 PHE PHE A . A 1 325 LEU 405 405 LEU LEU A . A 1 326 ASP 406 406 ASP ASP A . A 1 327 LEU 407 407 LEU LEU A . A 1 328 ILE 408 408 ILE ILE A . A 1 329 GLN 409 409 GLN GLN A . A 1 330 GLU 410 410 GLU GLU A . A 1 331 GLY 411 411 GLY GLY A . A 1 332 ASN 412 412 ASN ASN A . A 1 333 ILE 413 413 ILE ILE A . A 1 334 GLY 414 414 GLY GLY A . A 1 335 LEU 415 415 LEU LEU A . A 1 336 MET 416 416 MET MET A . A 1 337 LYS 417 417 LYS LYS A . A 1 338 ALA 418 418 ALA ALA A . A 1 339 VAL 419 419 VAL VAL A . A 1 340 ASP 420 420 ASP ASP A . A 1 341 LYS 421 421 LYS LYS A . A 1 342 PHE 422 422 PHE PHE A . A 1 343 GLU 423 423 GLU GLU A . A 1 344 TYR 424 424 TYR TYR A . A 1 345 ARG 425 425 ARG ARG A . A 1 346 ARG 426 426 ARG ARG A . A 1 347 GLY 427 427 GLY GLY A . A 1 348 TYR 428 428 TYR TYR A . A 1 349 LYS 429 429 LYS LYS A . A 1 350 PHE 430 430 PHE PHE A . A 1 351 SER 431 431 SER SER A . A 1 352 THR 432 432 THR THR A . A 1 353 TYR 433 433 TYR TYR A . A 1 354 ALA 434 434 ALA ALA A . A 1 355 THR 435 435 THR THR A . A 1 356 TRP 436 436 TRP TRP A . A 1 357 TRP 437 437 TRP TRP A . A 1 358 ILE 438 438 ILE ILE A . A 1 359 ARG 439 439 ARG ARG A . A 1 360 GLN 440 440 GLN GLN A . A 1 361 ALA 441 441 ALA ALA A . A 1 362 ILE 442 442 ILE ILE A . A 1 363 THR 443 443 THR THR A . A 1 364 ARG 444 444 ARG ARG A . A 1 365 SER 445 445 SER SER A . A 1 366 ILE 446 446 ILE ILE A . A 1 367 ALA 447 447 ALA ALA A . A 1 368 ASP 448 448 ASP ASP A . A 1 369 GLN 449 449 GLN GLN A . A 1 370 ALA 450 450 ALA ALA A . A 1 371 ARG 451 451 ARG ARG A . A 1 372 THR 452 452 THR THR A . A 1 373 ILE 453 453 ILE ILE A . A 1 374 ARG 454 454 ARG ARG A . A 1 375 ILE 455 455 ILE ILE A . A 1 376 PRO 456 456 PRO PRO A . A 1 377 VAL 457 457 VAL VAL A . A 1 378 HIS 458 458 HIS HIS A . A 1 379 MET 459 459 MET MET A . A 1 380 ILE 460 460 ILE ILE A . A 1 381 GLU 461 461 GLU GLU A . A 1 382 THR 462 462 THR THR A . A 1 383 ILE 463 463 ILE ILE A . A 1 384 ASN 464 464 ASN ASN A . A 1 385 LYS 465 465 LYS LYS A . A 1 386 LEU 466 466 LEU LEU A . A 1 387 ASN 467 467 ASN ASN A . A 1 388 ARG 468 468 ARG ARG A . A 1 389 ILE 469 469 ILE ILE A . A 1 390 SER 470 470 SER SER A . A 1 391 ARG 471 471 ARG ARG A . A 1 392 GLN 472 472 GLN GLN A . A 1 393 MET 473 473 MET MET A . A 1 394 LEU 474 474 LEU LEU A . A 1 395 GLN 475 475 GLN GLN A . A 1 396 GLU 476 476 GLU GLU A . A 1 397 MET 477 477 MET MET A . A 1 398 GLY 478 478 GLY GLY A . A 1 399 ARG 479 479 ARG ARG A . A 1 400 GLU 480 480 GLU GLU A . A 1 401 PRO 481 481 PRO PRO A . A 1 402 THR 482 482 THR THR A . A 1 403 PRO 483 483 PRO PRO A . A 1 404 GLU 484 484 GLU GLU A . A 1 405 GLU 485 485 GLU GLU A . A 1 406 LEU 486 486 LEU LEU A . A 1 407 ALA 487 487 ALA ALA A . A 1 408 GLU 488 488 GLU GLU A . A 1 409 ARG 489 489 ARG ARG A . A 1 410 MET 490 490 MET MET A . A 1 411 LEU 491 491 LEU LEU A . A 1 412 MET 492 492 MET MET A . A 1 413 PRO 493 493 PRO PRO A . A 1 414 GLU 494 494 GLU GLU A . A 1 415 ASP 495 495 ASP ASP A . A 1 416 LYS 496 496 LYS LYS A . A 1 417 ILE 497 497 ILE ILE A . A 1 418 ARG 498 498 ARG ARG A . A 1 419 LYS 499 499 LYS LYS A . A 1 420 VAL 500 500 VAL VAL A . A 1 421 LEU 501 501 LEU LEU A . A 1 422 LYS 502 502 LYS LYS A . A 1 423 ILE 503 503 ILE ILE A . A 1 424 ALA 504 504 ALA ALA A . A 1 425 LYS 505 505 LYS LYS A . A 1 426 GLU 506 506 GLU GLU A . A 1 427 PRO 507 507 PRO PRO A . A 1 428 ILE 508 508 ILE ILE A . A 1 429 SER 509 509 SER SER A . A 1 430 MET 510 510 MET MET A . A 1 431 GLU 511 511 GLU GLU A . A 1 432 THR 512 512 THR THR A . A 1 433 PRO 513 513 PRO PRO A . A 1 434 ILE 514 514 ILE ILE A . A 1 435 GLY 515 515 GLY GLY A . A 1 436 ASP 516 516 ASP ASP A . A 1 437 ASP 517 517 ASP ASP A . A 1 438 GLU 518 518 GLU GLU A . A 1 439 ASP 519 519 ASP ASP A . A 1 440 SER 520 520 SER SER A . A 1 441 HIS 521 521 HIS HIS A . A 1 442 LEU 522 522 LEU LEU A . A 1 443 GLY 523 523 GLY GLY A . A 1 444 ASP 524 524 ASP ASP A . A 1 445 PHE 525 525 PHE PHE A . A 1 446 ILE 526 526 ILE ILE A . A 1 447 GLU 527 527 GLU GLU A . A 1 448 ASP 528 528 ASP ASP A . A 1 449 THR 529 529 THR THR A . A 1 450 THR 530 530 THR THR A . A 1 451 LEU 531 531 LEU LEU A . A 1 452 GLU 532 532 GLU GLU A . A 1 453 LEU 533 533 LEU LEU A . A 1 454 PRO 534 534 PRO PRO A . A 1 455 LEU 535 535 LEU LEU A . A 1 456 ASP 536 536 ASP ASP A . A 1 457 SER 537 537 SER SER A . A 1 458 ALA 538 538 ALA ALA A . A 1 459 THR 539 539 THR THR A . A 1 460 THR 540 540 THR THR A . A 1 461 GLU 541 541 GLU GLU A . A 1 462 SER 542 542 SER SER A . A 1 463 LEU 543 543 LEU LEU A . A 1 464 ARG 544 544 ARG ARG A . A 1 465 ALA 545 545 ALA ALA A . A 1 466 ALA 546 546 ALA ALA A . A 1 467 THR 547 547 THR THR A . A 1 468 HIS 548 548 HIS HIS A . A 1 469 ASP 549 549 ASP ASP A . A 1 470 VAL 550 550 VAL VAL A . A 1 471 LEU 551 551 LEU LEU A . A 1 472 ALA 552 552 ALA ALA A . A 1 473 GLY 553 553 GLY GLY A . A 1 474 LEU 554 554 LEU LEU A . A 1 475 THR 555 555 THR THR A . A 1 476 ALA 556 556 ALA ALA A . A 1 477 ARG 557 557 ARG ARG A . A 1 478 GLU 558 558 GLU GLU A . A 1 479 ALA 559 559 ALA ALA A . A 1 480 LYS 560 560 LYS LYS A . A 1 481 VAL 561 561 VAL VAL A . A 1 482 LEU 562 562 LEU LEU A . A 1 483 ARG 563 563 ARG ARG A . A 1 484 MET 564 564 MET MET A . A 1 485 ARG 565 565 ARG ARG A . A 1 486 PHE 566 566 PHE PHE A . A 1 487 GLY 567 567 GLY GLY A . A 1 488 ILE 568 568 ILE ILE A . A 1 489 ASP 569 569 ASP ASP A . A 1 490 MET 570 570 MET MET A . A 1 491 ASN 571 571 ASN ASN A . A 1 492 THR 572 572 THR THR A . A 1 493 ASP 573 573 ASP ASP A . A 1 494 TYR 574 574 TYR TYR A . A 1 495 THR 575 575 THR THR A . A 1 496 LEU 576 576 LEU LEU A . A 1 497 GLU 577 577 GLU GLU A . A 1 498 GLU 578 578 GLU GLU A . A 1 499 VAL 579 579 VAL VAL A . A 1 500 GLY 580 580 GLY GLY A . A 1 501 LYS 581 581 LYS LYS A . A 1 502 GLN 582 582 GLN GLN A . A 1 503 PHE 583 583 PHE PHE A . A 1 504 ASP 584 584 ASP ASP A . A 1 505 VAL 585 585 VAL VAL A . A 1 506 THR 586 586 THR THR A . A 1 507 ARG 587 587 ARG ARG A . A 1 508 GLU 588 588 GLU GLU A . A 1 509 ARG 589 589 ARG ARG A . A 1 510 ILE 590 590 ILE ILE A . A 1 511 ARG 591 591 ARG ARG A . A 1 512 GLN 592 592 GLN GLN A . A 1 513 ILE 593 593 ILE ILE A . A 1 514 GLU 594 594 GLU GLU A . A 1 515 ALA 595 595 ALA ALA A . A 1 516 LYS 596 596 LYS LYS A . A 1 517 ALA 597 597 ALA ALA A . A 1 518 LEU 598 598 LEU LEU A . A 1 519 ARG 599 599 ARG ARG A . A 1 520 LYS 600 600 LYS LYS A . A 1 521 LEU 601 601 LEU LEU A . A 1 522 ARG 602 602 ARG ARG A . A 1 523 HIS 603 603 HIS HIS A . A 1 524 PRO 604 604 PRO PRO A . A 1 525 SER 605 605 SER SER A . A 1 526 ARG 606 606 ARG ARG A . A 1 527 SER 607 607 SER SER A . A 1 528 GLU 608 608 GLU GLU A . A 1 529 VAL 609 609 VAL VAL A . A 1 530 LEU 610 610 LEU LEU A . A 1 531 ARG 611 611 ARG ARG A . A 1 532 SER 612 612 SER SER A . A 1 533 PHE 613 613 PHE PHE A . A 1 534 LEU 614 614 LEU LEU A . A 1 535 ASP 615 615 ASP ASP A . A 1 536 ASP 616 616 ASP ASP A . # # loop_ # #