HEADER DNA BINDING PROTEIN/DNA/RNA 22-FEB-24 9AR5 TITLE STRUCTURE OF ACIDOTHERMUS CELLULOLYTICUS CAS9 BOUND WITH METHYLATED TITLE 2 DNA CAVEAT 9AR5 RESIDUES SER A 524 AND ARG A 525 THAT ARE NEXT TO EACH OTHER CAVEAT 2 9AR5 IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED ENDONUCLEASE, CSN1 FAMILY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (92-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (25-MER); COMPND 11 CHAIN: X; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: DNA/RNA (5'-D(P*TP*AP*CP*A)-R(P*(5MC))- COMPND 15 D(P*CP*AP*AP*GP*CP*T)-3'); COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDOTHERMUS CELLULOLYTICUS; SOURCE 3 ORGANISM_TAXID: 28049; SOURCE 4 GENE: ACEL_1951; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ACIDOTHERMUS CELLULOLYTICUS; SOURCE 10 ORGANISM_TAXID: 28049; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ACIDOTHERMUS CELLULOLYTICUS; SOURCE 14 ORGANISM_TAXID: 28049; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: ACIDOTHERMUS CELLULOLYTICUS; SOURCE 18 ORGANISM_TAXID: 28049 KEYWDS CRISPR-CAS9, METHYLATED DNA, ACECAS9, HNH ROTATION, DNA BINDING KEYWDS 2 PROTEIN-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR A.DAS,J.RAI,B.WANG,H.LI REVDAT 1 26-FEB-25 9AR5 0 JRNL AUTH M.O.ROTH,Y.SHU,Y.ZHAO,D.TRASANIDOU,R.D.HOFFMAN,N.TRASANIDIS, JRNL AUTH 2 M.K.GELASCO,M.L.MEDINA,D.DAS,J.RAI,B.WANG,H.LI JRNL TITL MOLECULAR BASIS FOR EPIGENETIC-SENSITIVE EDITING BY CAS9 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.880 REMARK 3 NUMBER OF PARTICLES : 275004 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9AR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281282. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRISPR-CAS9 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, X, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 204 REMARK 465 GLY A 205 REMARK 465 ARG A 206 REMARK 465 ARG A 207 REMARK 465 ALA A 208 REMARK 465 GLU A 209 REMARK 465 GLU A 411 REMARK 465 GLU A 412 REMARK 465 GLU A 413 REMARK 465 GLN A 414 REMARK 465 GLU A 415 REMARK 465 GLU A 779 REMARK 465 PHE A 780 REMARK 465 TRP A 781 REMARK 465 ARG A 782 REMARK 465 ARG A 783 REMARK 465 PRO A 784 REMARK 465 SER A 785 REMARK 465 ASP A 786 REMARK 465 VAL A 787 REMARK 465 ASN A 788 REMARK 465 ARG A 789 REMARK 465 HIS A 790 REMARK 465 GLY A 1135 REMARK 465 GLY A 1136 REMARK 465 THR A 1137 REMARK 465 PRO A 1138 REMARK 465 G B 1 REMARK 465 G B 2 REMARK 465 U B 3 REMARK 465 A B 4 REMARK 465 G B 5 REMARK 465 G B 6 REMARK 465 A B 7 REMARK 465 U B 8 REMARK 465 G B 9 REMARK 465 A B 91 REMARK 465 G B 92 REMARK 465 C B 93 REMARK 465 A B 94 REMARK 465 C B 106 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 5MC D 34 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 C B 83 N2 G B 101 2.17 REMARK 500 OD2 ASP A 917 OH TYR A 930 2.19 REMARK 500 C2 A B 81 N1 G B 103 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 302 55.32 -91.89 REMARK 500 ASP A 329 35.94 -98.24 REMARK 500 LYS A 336 60.86 62.87 REMARK 500 SER A 407 56.90 -94.99 REMARK 500 LEU A 417 -0.94 67.60 REMARK 500 ARG A 519 -163.34 57.76 REMARK 500 ALA A 580 76.10 52.71 REMARK 500 THR A 628 52.81 -93.79 REMARK 500 ARG A 631 -10.06 72.93 REMARK 500 ARG A 635 -3.51 70.18 REMARK 500 GLU A 676 -159.80 -150.31 REMARK 500 GLU A 682 -5.87 73.08 REMARK 500 ASP A 723 64.11 60.15 REMARK 500 SER A 739 -154.75 57.63 REMARK 500 CYS A 807 31.61 -140.48 REMARK 500 SER A 947 86.72 -159.72 REMARK 500 CYS A1089 -134.07 61.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43770 RELATED DB: EMDB REMARK 900 STRUCTURE OF ACIDOTHERMUS CELLULOLYTICUS CAS9 BOUND WITH METHYLATED REMARK 900 DNA DBREF 9AR5 A 1 1138 UNP A0LWB3 A0LWB3_ACIC1 1 1138 DBREF 9AR5 B 1 106 PDB 9AR5 9AR5 1 106 DBREF 9AR5 X 1 25 PDB 9AR5 9AR5 1 25 DBREF 9AR5 D 30 40 PDB 9AR5 9AR5 30 40 SEQRES 1 A 1138 MET GLY GLY SER GLU VAL GLY THR VAL PRO VAL THR TRP SEQRES 2 A 1138 ARG LEU GLY VAL ASP VAL GLY GLU ARG SER ILE GLY LEU SEQRES 3 A 1138 ALA ALA VAL SER TYR GLU GLU ASP LYS PRO LYS GLU ILE SEQRES 4 A 1138 LEU ALA ALA VAL SER TRP ILE HIS ASP GLY GLY VAL GLY SEQRES 5 A 1138 ASP GLU ARG SER GLY ALA SER ARG LEU ALA LEU ARG GLY SEQRES 6 A 1138 MET ALA ARG ARG ALA ARG ARG LEU ARG ARG PHE ARG ARG SEQRES 7 A 1138 ALA ARG LEU ARG ASP LEU ASP MET LEU LEU SER GLU LEU SEQRES 8 A 1138 GLY TRP THR PRO LEU PRO ASP LYS ASN VAL SER PRO VAL SEQRES 9 A 1138 ASP ALA TRP LEU ALA ARG LYS ARG LEU ALA GLU GLU TYR SEQRES 10 A 1138 VAL VAL ASP GLU THR GLU ARG ARG ARG LEU LEU GLY TYR SEQRES 11 A 1138 ALA VAL SER HIS MET ALA ARG HIS ARG GLY TRP ARG ASN SEQRES 12 A 1138 PRO TRP THR THR ILE LYS ASP LEU LYS ASN LEU PRO GLN SEQRES 13 A 1138 PRO SER ASP SER TRP GLU ARG THR ARG GLU SER LEU GLU SEQRES 14 A 1138 ALA ARG TYR SER VAL SER LEU GLU PRO GLY THR VAL GLY SEQRES 15 A 1138 GLN TRP ALA GLY TYR LEU LEU GLN ARG ALA PRO GLY ILE SEQRES 16 A 1138 ARG LEU ASN PRO THR GLN GLN SER ALA GLY ARG ARG ALA SEQRES 17 A 1138 GLU LEU SER ASN ALA THR ALA PHE GLU THR ARG LEU ARG SEQRES 18 A 1138 GLN GLU ASP VAL LEU TRP GLU LEU ARG CYS ILE ALA ASP SEQRES 19 A 1138 VAL GLN GLY LEU PRO GLU ASP VAL VAL SER ASN VAL ILE SEQRES 20 A 1138 ASP ALA VAL PHE CYS GLN LYS ARG PRO SER VAL PRO ALA SEQRES 21 A 1138 GLU ARG ILE GLY ARG ASP PRO LEU ASP PRO SER GLN LEU SEQRES 22 A 1138 ARG ALA SER ARG ALA CYS LEU GLU PHE GLN GLU TYR ARG SEQRES 23 A 1138 ILE VAL ALA ALA VAL ALA ASN LEU ARG ILE ARG ASP GLY SEQRES 24 A 1138 SER GLY SER ARG PRO LEU SER LEU GLU GLU ARG ASN ALA SEQRES 25 A 1138 VAL ILE GLU ALA LEU LEU ALA GLN THR GLU ARG SER LEU SEQRES 26 A 1138 THR TRP SER ASP ILE ALA LEU GLU ILE LEU LYS LEU PRO SEQRES 27 A 1138 ASN GLU SER ASP LEU THR SER VAL PRO GLU GLU ASP GLY SEQRES 28 A 1138 PRO SER SER LEU ALA TYR SER GLN PHE ALA PRO PHE ASP SEQRES 29 A 1138 GLU THR SER ALA ARG ILE ALA GLU PHE ILE ALA LYS ASN SEQRES 30 A 1138 ARG ARG LYS ILE PRO THR PHE ALA GLN TRP TRP GLN GLU SEQRES 31 A 1138 GLN ASP ARG THR SER ARG SER ASP LEU VAL ALA ALA LEU SEQRES 32 A 1138 ALA ASP ASN SER ILE ALA GLY GLU GLU GLU GLN GLU LEU SEQRES 33 A 1138 LEU VAL HIS LEU PRO ASP ALA GLU LEU GLU ALA LEU GLU SEQRES 34 A 1138 GLY LEU ALA LEU PRO SER GLY ARG VAL ALA TYR SER ARG SEQRES 35 A 1138 LEU THR LEU SER GLY LEU THR ARG VAL MET ARG ASP ASP SEQRES 36 A 1138 GLY VAL ASP VAL HIS ASN ALA ARG LYS THR CYS PHE GLY SEQRES 37 A 1138 VAL ASP ASP ASN TRP ARG PRO PRO LEU PRO ALA LEU HIS SEQRES 38 A 1138 GLU ALA THR GLY HIS PRO VAL VAL ASP ARG ASN LEU ALA SEQRES 39 A 1138 ILE LEU ARG LYS PHE LEU SER SER ALA THR MET ARG TRP SEQRES 40 A 1138 GLY PRO PRO GLN SER ILE VAL VAL GLU LEU ALA ARG GLY SEQRES 41 A 1138 ALA SER GLU SER ARG GLU ARG GLN ALA GLU GLU GLU ALA SEQRES 42 A 1138 ALA ARG ARG ALA HIS ARG LYS ALA ASN ASP ARG ILE ARG SEQRES 43 A 1138 ALA GLU LEU ARG ALA SER GLY LEU SER ASP PRO SER PRO SEQRES 44 A 1138 ALA ASP LEU VAL ARG ALA ARG LEU LEU GLU LEU TYR ASP SEQRES 45 A 1138 CYS HIS CYS MET TYR CYS GLY ALA PRO ILE SER TRP GLU SEQRES 46 A 1138 ASN SER GLU LEU ASP HIS ILE VAL PRO ARG THR ASP GLY SEQRES 47 A 1138 GLY SER ASN ARG HIS GLU ASN LEU ALA ILE THR CYS GLY SEQRES 48 A 1138 ALA CYS ASN LYS GLU LYS GLY ARG ARG PRO PHE ALA SER SEQRES 49 A 1138 TRP ALA GLU THR SER ASN ARG VAL GLN LEU ARG ASP VAL SEQRES 50 A 1138 ILE ASP ARG VAL GLN LYS LEU LYS TYR SER GLY ASN MET SEQRES 51 A 1138 TYR TRP THR ARG ASP GLU PHE SER ARG TYR LYS LYS SER SEQRES 52 A 1138 VAL VAL ALA ARG LEU LYS ARG ARG THR SER ASP PRO GLU SEQRES 53 A 1138 VAL ILE GLN SER ILE GLU SER THR GLY TYR ALA ALA VAL SEQRES 54 A 1138 ALA LEU ARG ASP ARG LEU LEU SER TYR GLY GLU LYS ASN SEQRES 55 A 1138 GLY VAL ALA GLN VAL ALA VAL PHE ARG GLY GLY VAL THR SEQRES 56 A 1138 ALA GLU ALA ARG ARG TRP LEU ASP ILE SER ILE GLU ARG SEQRES 57 A 1138 LEU PHE SER ARG VAL ALA ILE PHE ALA GLN SER THR SER SEQRES 58 A 1138 THR LYS ARG LEU ASP ARG ARG HIS HIS ALA VAL ASP ALA SEQRES 59 A 1138 VAL VAL LEU THR THR LEU THR PRO GLY VAL ALA LYS THR SEQRES 60 A 1138 LEU ALA ASP ALA ARG SER ARG ARG VAL SER ALA GLU PHE SEQRES 61 A 1138 TRP ARG ARG PRO SER ASP VAL ASN ARG HIS SER THR GLU SEQRES 62 A 1138 GLU PRO GLN SER PRO ALA TYR ARG GLN TRP LYS GLU SER SEQRES 63 A 1138 CYS SER GLY LEU GLY ASP LEU LEU ILE SER THR ALA ALA SEQRES 64 A 1138 ARG ASP SER ILE ALA VAL ALA ALA PRO LEU ARG LEU ARG SEQRES 65 A 1138 PRO THR GLY ALA LEU HIS GLU GLU THR LEU ARG ALA PHE SEQRES 66 A 1138 SER GLU HIS THR VAL GLY ALA ALA TRP LYS GLY ALA GLU SEQRES 67 A 1138 LEU ARG ARG ILE VAL GLU PRO GLU VAL TYR ALA ALA PHE SEQRES 68 A 1138 LEU ALA LEU THR ASP PRO GLY GLY ARG PHE LEU LYS VAL SEQRES 69 A 1138 SER PRO SER GLU ASP VAL LEU PRO ALA ASP GLU ASN ARG SEQRES 70 A 1138 HIS ILE VAL LEU SER ASP ARG VAL LEU GLY PRO ARG ASP SEQRES 71 A 1138 ARG VAL LYS LEU PHE PRO ASP ASP ARG GLY SER ILE ARG SEQRES 72 A 1138 VAL ARG GLY GLY ALA ALA TYR ILE ALA SER PHE HIS HIS SEQRES 73 A 1138 ALA ARG VAL PHE ARG TRP GLY SER SER HIS SER PRO SER SEQRES 74 A 1138 PHE ALA LEU LEU ARG VAL SER LEU ALA ASP LEU ALA VAL SEQRES 75 A 1138 ALA GLY LEU LEU ARG ASP GLY VAL ASP VAL PHE THR ALA SEQRES 76 A 1138 GLU LEU PRO PRO TRP THR PRO ALA TRP ARG TYR ALA SER SEQRES 77 A 1138 ILE ALA LEU VAL LYS ALA VAL GLU SER GLY ASP ALA LYS SEQRES 78 A 1138 GLN VAL GLY TRP LEU VAL PRO GLY ASP GLU LEU ASP PHE SEQRES 79 A 1138 GLY PRO GLU GLY VAL THR THR ALA ALA GLY ASP LEU SER SEQRES 80 A 1138 MET PHE LEU LYS TYR PHE PRO GLU ARG HIS TRP VAL VAL SEQRES 81 A 1138 THR GLY PHE GLU ASP ASP LYS ARG ILE ASN LEU LYS PRO SEQRES 82 A 1138 ALA PHE LEU SER ALA GLU GLN ALA GLU VAL LEU ARG THR SEQRES 83 A 1138 GLU ARG SER ASP ARG PRO ASP THR LEU THR GLU ALA GLY SEQRES 84 A 1138 GLU ILE LEU ALA GLN PHE PHE PRO ARG CYS TRP ARG ALA SEQRES 85 A 1138 THR VAL ALA LYS VAL LEU CYS HIS PRO GLY LEU THR VAL SEQRES 86 A 1138 ILE ARG ARG THR ALA LEU GLY GLN PRO ARG TRP ARG ARG SEQRES 87 A 1138 GLY HIS LEU PRO TYR SER TRP ARG PRO TRP SER ALA ASP SEQRES 88 A 1138 PRO TRP SER GLY GLY THR PRO SEQRES 1 B 106 G G U A G G A U G G C A A SEQRES 2 B 106 G A U C C U G G U A U G C SEQRES 3 B 106 U G G G G A G C C U G A A SEQRES 4 B 106 A A G G C U A C C U A G C SEQRES 5 B 106 A A G A C C C C U U C G U SEQRES 6 B 106 G G G G U C G C A U U C U SEQRES 7 B 106 U C A C C C C C U C G C A SEQRES 8 B 106 G C A G C G A G G G G G U SEQRES 9 B 106 U C SEQRES 1 X 25 DA DG DC DT DT DG DG DT DG DT DA DT DA SEQRES 2 X 25 DC DC DA DG DG DA DT DC DT DT DG DC SEQRES 1 D 11 DT DA DC DA 5MC DC DA DA DG DC DT HET 5MC D 34 20 HETNAM 5MC 5-METHYLCYTIDINE-5'-MONOPHOSPHATE FORMUL 4 5MC C10 H16 N3 O8 P HELIX 1 AA1 SER A 59 GLY A 92 1 34 HELIX 2 AA2 VAL A 104 GLU A 116 1 13 HELIX 3 AA3 ASP A 120 HIS A 138 1 19 HELIX 4 AA4 THR A 147 ASN A 153 1 7 HELIX 5 AA5 SER A 158 SER A 173 1 16 HELIX 6 AA6 THR A 180 ALA A 192 1 13 HELIX 7 AA7 ARG A 221 GLN A 236 1 16 HELIX 8 AA8 PRO A 239 PHE A 251 1 13 HELIX 9 AA9 CYS A 279 ASN A 293 1 15 HELIX 10 AB1 SER A 306 ALA A 316 1 11 HELIX 11 AB2 TRP A 327 LEU A 332 1 6 HELIX 12 AB3 SER A 354 GLN A 359 1 6 HELIX 13 AB4 ASP A 364 ASN A 377 1 14 HELIX 14 AB5 ILE A 381 GLU A 390 1 10 HELIX 15 AB6 ASP A 392 ASP A 405 1 14 HELIX 16 AB7 PRO A 421 GLY A 430 1 10 HELIX 17 AB8 SER A 441 VAL A 451 1 11 HELIX 18 AB9 ASP A 458 PHE A 467 1 10 HELIX 19 AC1 HIS A 486 GLY A 508 1 23 HELIX 20 AC2 GLU A 526 GLY A 553 1 28 HELIX 21 AC3 SER A 558 ASP A 572 1 15 HELIX 22 AC4 PRO A 594 GLY A 598 5 5 HELIX 23 AC5 ASP A 636 LYS A 643 1 8 HELIX 24 AC6 THR A 653 LYS A 669 1 17 HELIX 25 AC7 GLY A 685 GLY A 703 1 19 HELIX 26 AC8 VAL A 714 ASP A 723 1 10 HELIX 27 AC9 SER A 725 SER A 731 1 7 HELIX 28 AD1 ARG A 748 LEU A 760 1 13 HELIX 29 AD2 THR A 761 SER A 777 1 17 HELIX 30 AD3 SER A 797 SER A 806 1 10 HELIX 31 AD4 GLY A 809 ARG A 820 1 12 HELIX 32 AD5 GLY A 856 ARG A 861 1 6 HELIX 33 AD6 GLU A 864 ASP A 876 1 13 HELIX 34 AD7 LEU A 957 ALA A 963 1 7 HELIX 35 AD8 THR A 981 TYR A 986 1 6 HELIX 36 AD9 SER A 988 GLY A 998 1 11 HELIX 37 AE1 GLY A 1024 PHE A 1033 1 10 HELIX 38 AE2 SER A 1057 ARG A 1071 1 15 HELIX 39 AE3 THR A 1076 PHE A 1086 1 11 HELIX 40 AE4 VAL A 1094 LEU A 1098 1 5 SHEET 1 AA1 6 GLN A 706 PHE A 710 0 SHEET 2 AA1 6 SER A 512 LEU A 517 1 N VAL A 515 O PHE A 710 SHEET 3 AA1 6 TRP A 13 VAL A 19 1 N VAL A 19 O GLU A 516 SHEET 4 AA1 6 SER A 23 TYR A 31 -1 O GLY A 25 N ASP A 18 SHEET 5 AA1 6 PRO A 36 ILE A 46 -1 O GLU A 38 N SER A 30 SHEET 6 AA1 6 ALA A 824 ALA A 826 1 O ALA A 824 N SER A 44 SHEET 1 AA2 2 ARG A 295 ILE A 296 0 SHEET 2 AA2 2 LEU A 343 THR A 344 -1 O THR A 344 N ARG A 295 SHEET 1 AA3 2 ASP A 590 HIS A 591 0 SHEET 2 AA3 2 LEU A 606 ALA A 607 -1 O ALA A 607 N ASP A 590 SHEET 1 AA4 3 HIS A 838 ARG A 843 0 SHEET 2 AA4 3 GLY A 927 ILE A 931 -1 O TYR A 930 N GLU A 839 SHEET 3 AA4 3 SER A 921 VAL A 924 -1 N ILE A 922 O ALA A 929 SHEET 1 AA5 2 SER A 846 THR A 849 0 SHEET 2 AA5 2 ARG A 911 LEU A 914 -1 O LEU A 914 N SER A 846 SHEET 1 AA6 2 TRP A 854 LYS A 855 0 SHEET 2 AA6 2 ASP A 889 LEU A 891 -1 O LEU A 891 N TRP A 854 SHEET 1 AA7 2 ILE A 899 VAL A 900 0 SHEET 2 AA7 2 VAL A 905 LEU A 906 -1 O LEU A 906 N ILE A 899 SHEET 1 AA8 3 SER A 949 SER A 956 0 SHEET 2 AA8 3 PHE A 934 TRP A 942 -1 N PHE A 940 O ALA A 951 SHEET 3 AA8 3 LYS A1001 LEU A1006 -1 O GLY A1004 N VAL A 939 SHEET 1 AA9 5 TRP A1090 THR A1093 0 SHEET 2 AA9 5 ARG A1048 PRO A1053 -1 N ILE A1049 O ALA A1092 SHEET 3 AA9 5 HIS A1037 ASP A1045 -1 N VAL A1039 O LYS A1052 SHEET 4 AA9 5 GLU A1011 ASP A1013 -1 N LEU A1012 O TRP A1038 SHEET 5 AA9 5 THR A1104 ILE A1106 -1 O THR A1104 N ASP A1013 SSBOND 1 CYS A 575 CYS A 578 1555 1555 2.03 SSBOND 2 CYS A 575 CYS A 610 1555 1555 2.03 SSBOND 3 CYS A 575 CYS A 613 1555 1555 2.03 SSBOND 4 CYS A 578 CYS A 610 1555 1555 2.03 SSBOND 5 CYS A 610 CYS A 613 1555 1555 2.03 LINK O3' DA D 33 P 5MC D 34 1555 1555 1.61 LINK O3' 5MC D 34 P DC D 35 1555 1555 1.61 CISPEP 1 GLN A 156 PRO A 157 0 -2.45 CISPEP 2 GLU A 177 PRO A 178 0 -5.54 CISPEP 3 PRO A 675 GLU A 676 0 -9.22 CISPEP 4 GLY A 712 GLY A 713 0 -1.90 CISPEP 5 SER A 791 THR A 792 0 -0.15 CISPEP 6 PHE A 1086 PRO A 1087 0 -3.05 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8717 SER A1134 TER 10679 U B 105 TER 11194 DC X 25 HETATM11276 P 5MC D 34 119.479 139.511 146.773 1.00 31.61 P HETATM11277 OP1 5MC D 34 118.302 140.335 146.264 1.00 28.69 O HETATM11278 OP2 5MC D 34 120.705 140.255 147.282 1.00 31.35 O HETATM11279 O5' 5MC D 34 118.934 138.652 148.139 1.00 21.61 O HETATM11280 C5' 5MC D 34 118.437 137.389 147.839 1.00 24.44 C HETATM11281 C4' 5MC D 34 118.148 136.588 149.084 1.00 32.61 C HETATM11282 O4' 5MC D 34 119.199 135.669 149.335 1.00 29.66 O HETATM11283 C3' 5MC D 34 117.979 137.442 150.340 1.00 33.01 C HETATM11284 O3' 5MC D 34 116.714 137.154 150.884 1.00 36.76 O HETATM11285 C2' 5MC D 34 119.145 137.008 151.245 1.00 31.19 C HETATM11286 C1' 5MC D 34 119.487 135.621 150.696 1.00 30.18 C HETATM11287 N1 5MC D 34 120.852 135.167 150.875 1.00 32.44 N HETATM11288 C2 5MC D 34 121.121 133.890 151.375 1.00 34.90 C HETATM11289 O2 5MC D 34 120.195 133.147 151.670 1.00 38.48 O HETATM11290 N3 5MC D 34 122.406 133.525 151.515 1.00 31.58 N HETATM11291 C4 5MC D 34 123.387 134.340 151.192 1.00 34.38 C HETATM11292 N4 5MC D 34 124.640 133.918 151.355 1.00 39.41 N HETATM11293 C5 5MC D 34 123.158 135.655 150.676 1.00 31.71 C HETATM11294 C6 5MC D 34 121.866 136.003 150.543 1.00 25.43 C HETATM11295 CM5 5MC D 34 124.284 136.559 150.319 1.00 36.16 C TER 11418 DT D 40 CONECT 4405 4431 4675 4690 CONECT 4431 4405 4675 CONECT 4675 4405 4431 4690 CONECT 4690 4405 4675 CONECT1126311276 CONECT1127611263112771127811279 CONECT1127711276 CONECT1127811276 CONECT112791127611280 CONECT112801127911281 CONECT11281112801128211283 CONECT112821128111286 CONECT11283112811128411285 CONECT112841128311296 CONECT112851128311286 CONECT11286112821128511287 CONECT11287112861128811294 CONECT11288112871128911290 CONECT1128911288 CONECT112901128811291 CONECT11291112901129211293 CONECT1129211291 CONECT11293112911129411295 CONECT112941128711293 CONECT1129511293 CONECT1129611284 MASTER 207 0 1 40 27 0 0 611414 4 26 100 END