HEADER DNA BINDING PROTEIN/DNA/RNA 22-FEB-24 9AR6 TITLE CRYOEM STRUCTURE OF THERMOCAS9 IN PRE-CLEAVAGE STATE BOUND WITH THE TITLE 2 DNA CONTAINING NNNNCCA PAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED ENDONUCLEASE CAS9; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NON-TARGET DNA; COMPND 8 CHAIN: D; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: TARGET-STRAND DNA; COMPND 12 CHAIN: P; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: SINGLE GUIDE RNA; COMPND 16 CHAIN: B; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 33940; SOURCE 4 GENE: CAS9-2, CAS9, GTHT12_03401; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 10 ORGANISM_TAXID: 33940; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 14 ORGANISM_TAXID: 33940; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 18 ORGANISM_TAXID: 33940 KEYWDS CRISPR-CAS9; CAS9; EPIGENETICS; ENDONUCLEASE; HNH; RUVC; METAL KEYWDS 2 BINDING; RNA, DNA BINDING PROTEIN-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Y.ZHAO,Y.SHU,H.LI REVDAT 1 26-FEB-25 9AR6 0 JRNL AUTH M.ROTH,Y.SHU,D.TRASANIDOU,Y.ZHAO,J.VAN DER OOST,H.LI JRNL TITL MOLECULAR BASIS FOR EPIGENETIC-SENSITIVE EDITING BY CAS9 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.770 REMARK 3 NUMBER OF PARTICLES : 63887 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9AR6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281284. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TERNARY COMPLEX OF THERMOCAS9 REMARK 245 WITH SINGLE GUIDE RNA AND REMARK 245 TARGET DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 QUANTUM (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 820.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, P, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 133 REMARK 465 GLU A 134 REMARK 465 ARG A 135 REMARK 465 THR A 136 REMARK 465 ASN A 137 REMARK 465 LYS A 138 REMARK 465 GLU A 139 REMARK 465 ASN A 140 REMARK 465 SER A 141 REMARK 465 LYS A 1074 REMARK 465 ALA A 1075 REMARK 465 GLY A 1076 REMARK 465 GLU A 1077 REMARK 465 THR A 1078 REMARK 465 ILE A 1079 REMARK 465 ARG A 1080 REMARK 465 PRO A 1081 REMARK 465 LEU A 1082 REMARK 465 DT P 31 REMARK 465 DA P 32 REMARK 465 DC P 33 REMARK 465 DC P 34 REMARK 465 DT P 35 REMARK 465 DC P 36 REMARK 465 DT P 37 REMARK 465 DA P 38 REMARK 465 DG P 39 REMARK 465 DA P 40 REMARK 465 G B 1 REMARK 465 G B 2 REMARK 465 U B 3 REMARK 465 A B 4 REMARK 465 C B 110 REMARK 465 G B 111 REMARK 465 C B 112 REMARK 465 C B 113 REMARK 465 C B 114 REMARK 465 G B 115 REMARK 465 C B 116 REMARK 465 U B 117 REMARK 465 U B 118 REMARK 465 U B 119 REMARK 465 C B 120 REMARK 465 U B 121 REMARK 465 U B 122 REMARK 465 C B 123 REMARK 465 G B 124 REMARK 465 G B 125 REMARK 465 G B 126 REMARK 465 C B 127 REMARK 465 A B 128 REMARK 465 U B 129 REMARK 465 U B 147 REMARK 465 U B 148 REMARK 465 U B 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA D 33 O3' DA D 33 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 231 CB - CG - OD1 ANGL. DEV. = 8.3 DEGREES REMARK 500 DA D 33 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DA D 36 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 35 54.67 -96.36 REMARK 500 ARG A 36 -11.65 67.04 REMARK 500 GLU A 77 48.23 -94.32 REMARK 500 ILE A 79 -61.47 -107.93 REMARK 500 HIS A 93 70.23 57.91 REMARK 500 ARG A 131 -9.44 72.63 REMARK 500 ARG A 158 -10.66 73.17 REMARK 500 LYS A 166 -63.38 -101.86 REMARK 500 TYR A 204 52.86 -91.15 REMARK 500 LYS A 245 -31.03 -130.84 REMARK 500 GLU A 329 52.20 -92.51 REMARK 500 LEU A 336 77.03 -102.02 REMARK 500 GLU A 404 -6.29 67.89 REMARK 500 THR A 451 154.03 71.34 REMARK 500 GLN A 457 59.36 35.70 REMARK 500 ALA A 469 -153.02 64.78 REMARK 500 TYR A 536 50.84 -95.90 REMARK 500 ASN A 541 73.18 52.95 REMARK 500 PRO A 542 47.61 -86.90 REMARK 500 SER A 554 38.54 -98.16 REMARK 500 GLU A 555 -165.08 -79.25 REMARK 500 TYR A 562 32.02 -140.55 REMARK 500 TYR A 577 -67.14 61.32 REMARK 500 ASN A 610 34.48 -96.40 REMARK 500 SER A 638 -70.68 -84.85 REMARK 500 THR A 666 50.91 -94.86 REMARK 500 ASN A 710 33.30 -97.71 REMARK 500 CYS A 729 31.62 -91.80 REMARK 500 LYS A 848 2.96 57.48 REMARK 500 LYS A 857 -15.00 63.61 REMARK 500 ASP A 860 79.58 -156.44 REMARK 500 ARG A 870 47.04 -87.73 REMARK 500 HIS A 874 30.94 -99.98 REMARK 500 ASN A 875 47.50 36.42 REMARK 500 ASN A 892 -67.55 -95.54 REMARK 500 LYS A 918 -9.34 67.74 REMARK 500 ARG A 977 -62.07 -102.38 REMARK 500 ASN A1030 51.09 -94.89 REMARK 500 THR A1041 35.12 -99.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U B 95 O2' REMARK 620 2 U B 96 O4' 65.3 REMARK 620 3 G B 99 O6 167.7 125.6 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43771 RELATED DB: EMDB REMARK 900 CRYOEM STRUCTURE OF THERMOCAS9 IN PRE-CLEAVAGE STATE BOUND WITH THE REMARK 900 DNA CONTAINING NNNNCCA PAM DBREF1 9AR6 A 1 1082 UNP A0A1W6VMQ3_GEOTD DBREF2 9AR6 A A0A1W6VMQ3 1 1082 DBREF 9AR6 D 29 40 PDB 9AR6 9AR6 29 40 DBREF 9AR6 P 1 40 PDB 9AR6 9AR6 1 40 DBREF 9AR6 B 1 149 PDB 9AR6 9AR6 1 149 SEQRES 1 A 1082 MET LYS TYR LYS ILE GLY LEU ASP ILE GLY ILE THR SER SEQRES 2 A 1082 ILE GLY TRP ALA VAL ILE ASN LEU ASP ILE PRO ARG ILE SEQRES 3 A 1082 GLU ASP LEU GLY VAL ARG ILE PHE ASP ARG ALA GLU ASN SEQRES 4 A 1082 PRO LYS THR GLY GLU SER LEU ALA LEU PRO ARG ARG LEU SEQRES 5 A 1082 ALA ARG SER ALA ARG ARG ARG LEU ARG ARG ARG LYS HIS SEQRES 6 A 1082 ARG LEU GLU ARG ILE ARG ARG LEU PHE VAL ARG GLU GLY SEQRES 7 A 1082 ILE LEU THR LYS GLU GLU LEU ASN LYS LEU PHE GLU LYS SEQRES 8 A 1082 LYS HIS GLU ILE ASP VAL TRP GLN LEU ARG VAL GLU ALA SEQRES 9 A 1082 LEU ASP ARG LYS LEU ASN ASN ASP GLU LEU ALA ARG ILE SEQRES 10 A 1082 LEU LEU HIS LEU ALA LYS ARG ARG GLY PHE ARG SER ASN SEQRES 11 A 1082 ARG LYS SER GLU ARG THR ASN LYS GLU ASN SER THR MET SEQRES 12 A 1082 LEU LYS HIS ILE GLU GLU ASN GLN SER ILE LEU SER SER SEQRES 13 A 1082 TYR ARG THR VAL ALA GLU MET VAL VAL LYS ASP PRO LYS SEQRES 14 A 1082 PHE SER LEU HIS LYS ARG ASN LYS GLU ASP ASN TYR THR SEQRES 15 A 1082 ASN THR VAL ALA ARG ASP ASP LEU GLU ARG GLU ILE LYS SEQRES 16 A 1082 LEU ILE PHE ALA LYS GLN ARG GLU TYR GLY ASN ILE VAL SEQRES 17 A 1082 CYS THR GLU ALA PHE GLU HIS GLU TYR ILE SER ILE TRP SEQRES 18 A 1082 ALA SER GLN ARG PRO PHE ALA SER LYS ASP ASP ILE GLU SEQRES 19 A 1082 LYS LYS VAL GLY PHE CYS THR PHE GLU PRO LYS GLU LYS SEQRES 20 A 1082 ARG ALA PRO LYS ALA THR TYR THR PHE GLN SER PHE THR SEQRES 21 A 1082 VAL TRP GLU HIS ILE ASN LYS LEU ARG LEU VAL SER PRO SEQRES 22 A 1082 GLY GLY ILE ARG ALA LEU THR ASP ASP GLU ARG ARG LEU SEQRES 23 A 1082 ILE TYR LYS GLN ALA PHE HIS LYS ASN LYS ILE THR PHE SEQRES 24 A 1082 HIS ASP VAL ARG THR LEU LEU ASN LEU PRO ASP ASP THR SEQRES 25 A 1082 ARG PHE LYS GLY LEU LEU TYR ASP ARG ASN THR THR LEU SEQRES 26 A 1082 LYS GLU ASN GLU LYS VAL ARG PHE LEU GLU LEU GLY ALA SEQRES 27 A 1082 TYR HIS LYS ILE ARG LYS ALA ILE ASP SER VAL TYR GLY SEQRES 28 A 1082 LYS GLY ALA ALA LYS SER PHE ARG PRO ILE ASP PHE ASP SEQRES 29 A 1082 THR PHE GLY TYR ALA LEU THR MET PHE LYS ASP ASP THR SEQRES 30 A 1082 ASP ILE ARG SER TYR LEU ARG ASN GLU TYR GLU GLN ASN SEQRES 31 A 1082 GLY LYS ARG MET GLU ASN LEU ALA ASP LYS VAL TYR ASP SEQRES 32 A 1082 GLU GLU LEU ILE GLU GLU LEU LEU ASN LEU SER PHE SER SEQRES 33 A 1082 LYS PHE GLY HIS LEU SER LEU LYS ALA LEU ARG ASN ILE SEQRES 34 A 1082 LEU PRO TYR MET GLU GLN GLY GLU VAL TYR SER THR ALA SEQRES 35 A 1082 CYS GLU ARG ALA GLY TYR THR PHE THR GLY PRO LYS LYS SEQRES 36 A 1082 LYS GLN LYS THR VAL LEU LEU PRO ASN ILE PRO PRO ILE SEQRES 37 A 1082 ALA ASN PRO VAL VAL MET ARG ALA LEU THR GLN ALA ARG SEQRES 38 A 1082 LYS VAL VAL ASN ALA ILE ILE LYS LYS TYR GLY SER PRO SEQRES 39 A 1082 VAL SER ILE HIS ILE GLU LEU ALA ARG GLU LEU SER GLN SEQRES 40 A 1082 SER PHE ASP GLU ARG ARG LYS MET GLN LYS GLU GLN GLU SEQRES 41 A 1082 GLY ASN ARG LYS LYS ASN GLU THR ALA ILE ARG GLN LEU SEQRES 42 A 1082 VAL GLU TYR GLY LEU THR LEU ASN PRO THR GLY LEU ASP SEQRES 43 A 1082 ILE VAL LYS PHE LYS LEU TRP SER GLU GLN ASN GLY LYS SEQRES 44 A 1082 CYS ALA TYR SER LEU GLN PRO ILE GLU ILE GLU ARG LEU SEQRES 45 A 1082 LEU GLU PRO GLY TYR THR GLU VAL ASP HIS VAL ILE PRO SEQRES 46 A 1082 TYR SER ARG SER LEU ASP ASP SER TYR THR ASN LYS VAL SEQRES 47 A 1082 LEU VAL LEU THR LYS GLU ASN ARG GLU LYS GLY ASN ARG SEQRES 48 A 1082 THR PRO ALA GLU TYR LEU GLY LEU GLY SER GLU ARG TRP SEQRES 49 A 1082 GLN GLN PHE GLU THR PHE VAL LEU THR ASN LYS GLN PHE SEQRES 50 A 1082 SER LYS LYS LYS ARG ASP ARG LEU LEU ARG LEU HIS TYR SEQRES 51 A 1082 ASP GLU ASN GLU GLU ASN GLU PHE LYS ASN ARG ASN LEU SEQRES 52 A 1082 ASN ASP THR ARG TYR ILE SER ARG PHE LEU ALA ASN PHE SEQRES 53 A 1082 ILE ARG GLU HIS LEU LYS PHE ALA ASP SER ASP ASP LYS SEQRES 54 A 1082 GLN LYS VAL TYR THR VAL ASN GLY ARG ILE THR ALA HIS SEQRES 55 A 1082 LEU ARG SER ARG TRP ASN PHE ASN LYS ASN ARG GLU GLU SEQRES 56 A 1082 SER ASN LEU HIS HIS ALA VAL ASP ALA ALA ILE VAL ALA SEQRES 57 A 1082 CYS THR THR PRO SER ASP ILE ALA ARG VAL THR ALA PHE SEQRES 58 A 1082 TYR GLN ARG ARG GLU GLN ASN LYS GLU LEU SER LYS LYS SEQRES 59 A 1082 THR ASP PRO GLN PHE PRO GLN PRO TRP PRO HIS PHE ALA SEQRES 60 A 1082 ASP GLU LEU GLN ALA ARG LEU SER LYS ASN PRO LYS GLU SEQRES 61 A 1082 SER ILE LYS ALA LEU ASN LEU GLY ASN TYR ASP ASN GLU SEQRES 62 A 1082 LYS LEU GLU SER LEU GLN PRO VAL PHE VAL SER ARG MET SEQRES 63 A 1082 PRO LYS ARG SER ILE THR GLY ALA ALA HIS GLN GLU THR SEQRES 64 A 1082 LEU ARG ARG TYR ILE GLY ILE ASP GLU ARG SER GLY LYS SEQRES 65 A 1082 ILE GLN THR VAL VAL LYS LYS LYS LEU SER GLU ILE GLN SEQRES 66 A 1082 LEU ASP LYS THR GLY HIS PHE PRO MET TYR GLY LYS GLU SEQRES 67 A 1082 SER ASP PRO ARG THR TYR GLU ALA ILE ARG GLN ARG LEU SEQRES 68 A 1082 LEU GLU HIS ASN ASN ASP PRO LYS LYS ALA PHE GLN GLU SEQRES 69 A 1082 PRO LEU TYR LYS PRO LYS LYS ASN GLY GLU LEU GLY PRO SEQRES 70 A 1082 ILE ILE ARG THR ILE LYS ILE ILE ASP THR THR ASN GLN SEQRES 71 A 1082 VAL ILE PRO LEU ASN ASP GLY LYS THR VAL ALA TYR ASN SEQRES 72 A 1082 SER ASN ILE VAL ARG VAL ASP VAL PHE GLU LYS ASP GLY SEQRES 73 A 1082 LYS TYR TYR CYS VAL PRO ILE TYR THR ILE ASP MET MET SEQRES 74 A 1082 LYS GLY ILE LEU PRO ASN LYS ALA ILE GLU PRO ASN LYS SEQRES 75 A 1082 PRO TYR SER GLU TRP LYS GLU MET THR GLU ASP TYR THR SEQRES 76 A 1082 PHE ARG PHE SER LEU TYR PRO ASN ASP LEU ILE ARG ILE SEQRES 77 A 1082 GLU PHE PRO ARG GLU LYS THR ILE LYS THR ALA VAL GLY SEQRES 78 A 1082 GLU GLU ILE LYS ILE LYS ASP LEU PHE ALA TYR TYR GLN SEQRES 79 A 1082 THR ILE ASP SER SER ASN GLY GLY LEU SER LEU VAL SER SEQRES 80 A 1082 HIS ASP ASN ASN PHE SER LEU ARG SER ILE GLY SER ARG SEQRES 81 A 1082 THR LEU LYS ARG PHE GLU LYS TYR GLN VAL ASP VAL LEU SEQRES 82 A 1082 GLY ASN ILE TYR LYS VAL ARG GLY GLU LYS ARG VAL GLY SEQRES 83 A 1082 VAL ALA SER SER SER HIS SER LYS ALA GLY GLU THR ILE SEQRES 84 A 1082 ARG PRO LEU SEQRES 1 D 12 DA DT DA DC DA DC DC DA DA DG DC DT SEQRES 1 P 40 DA DG DC DT DT DG DG DT DG DT DA DT DA SEQRES 2 P 40 DC DC DA DG DG DA DT DC DT DT DG DC DC SEQRES 3 P 40 DA DT DC DC DT DA DC DC DT DC DT DA DG SEQRES 4 P 40 DA SEQRES 1 B 147 G G U A G G A U G G C A A SEQRES 2 B 147 G A U C C U G G U A G U C SEQRES 3 B 147 A U A G U U C C C C U G G SEQRES 4 B 147 A A A C A G G G U U A C U SEQRES 5 B 147 A U G A U A A G G G C U U SEQRES 6 B 147 U C U G C C U A G G C A G SEQRES 7 B 147 A C U G A C C C G U G G C SEQRES 8 B 147 G U U G G G G A U C G C C SEQRES 9 B 147 U A U C G C C C G C U U U SEQRES 10 B 147 C U U C G G G C A U U C C SEQRES 11 B 147 C C A C U C U U A G G C G SEQRES 12 B 147 U U U U HET NA B 201 1 HET NA B 202 1 HETNAM NA SODIUM ION FORMUL 5 NA 2(NA 1+) FORMUL 7 HOH *2(H2 O) HELIX 1 AA1 LEU A 46 GLU A 77 1 32 HELIX 2 AA2 THR A 81 LYS A 87 1 7 HELIX 3 AA3 ASP A 96 GLU A 103 1 8 HELIX 4 AA4 ASN A 110 ARG A 124 1 15 HELIX 5 AA5 MET A 143 LEU A 154 1 12 HELIX 6 AA6 THR A 159 ASP A 167 1 9 HELIX 7 AA7 ALA A 186 TYR A 204 1 19 HELIX 8 AA8 THR A 210 ALA A 222 1 13 HELIX 9 AA9 ASP A 231 LYS A 236 1 6 HELIX 10 AB1 THR A 253 LYS A 267 1 15 HELIX 11 AB2 GLU A 283 PHE A 292 1 10 HELIX 12 AB3 PHE A 299 ASN A 307 1 9 HELIX 13 AB4 THR A 324 GLU A 329 1 6 HELIX 14 AB5 LEU A 336 GLY A 351 1 16 HELIX 15 AB6 ARG A 359 MET A 372 1 14 HELIX 16 AB7 ASP A 375 ARG A 384 1 10 HELIX 17 AB8 GLU A 404 LEU A 411 1 8 HELIX 18 AB9 ALA A 425 GLU A 434 1 10 HELIX 19 AC1 VAL A 438 GLU A 444 1 7 HELIX 20 AC2 ASN A 470 GLY A 492 1 23 HELIX 21 AC3 SER A 508 TYR A 536 1 29 HELIX 22 AC4 PRO A 542 PHE A 550 1 9 HELIX 23 AC5 LYS A 551 SER A 554 5 4 HELIX 24 AC6 GLU A 568 LEU A 572 5 5 HELIX 25 AC7 PRO A 585 LEU A 590 1 6 HELIX 26 AC8 THR A 602 GLY A 609 1 8 HELIX 27 AC9 THR A 612 GLY A 618 1 7 HELIX 28 AD1 SER A 621 LEU A 632 1 12 HELIX 29 AD2 LYS A 640 LEU A 646 1 7 HELIX 30 AD3 ASP A 651 ASN A 664 1 14 HELIX 31 AD4 ARG A 667 LEU A 681 1 15 HELIX 32 AD5 ASN A 696 TRP A 707 1 12 HELIX 33 AD6 LEU A 718 CYS A 729 1 12 HELIX 34 AD7 THR A 731 ASN A 748 1 18 HELIX 35 AD8 PHE A 766 LEU A 774 1 9 HELIX 36 AD9 ASN A 777 ASN A 786 1 10 HELIX 37 AE1 ASP A 791 GLU A 796 1 6 HELIX 38 AE2 SER A 842 ILE A 844 5 3 HELIX 39 AE3 ASP A 860 ARG A 870 1 11 HELIX 40 AE4 THR A 945 GLY A 951 1 7 HELIX 41 AE5 PRO A 963 TRP A 967 5 5 SHEET 1 AA1 6 VAL A 692 THR A 694 0 SHEET 2 AA1 6 SER A 496 LEU A 501 1 N ILE A 497 O TYR A 693 SHEET 3 AA1 6 TYR A 3 ILE A 9 1 N ILE A 5 O HIS A 498 SHEET 4 AA1 6 SER A 13 ASN A 20 -1 O GLY A 15 N ASP A 8 SHEET 5 AA1 6 ARG A 25 ILE A 33 -1 O ARG A 32 N ILE A 14 SHEET 6 AA1 6 SER A 804 ARG A 805 1 O SER A 804 N ILE A 33 SHEET 1 AA2 2 ALA A 249 PRO A 250 0 SHEET 2 AA2 2 PHE A 418 GLY A 419 -1 O GLY A 419 N ALA A 249 SHEET 1 AA3 3 ILE A 276 ARG A 277 0 SHEET 2 AA3 3 ARG A 269 VAL A 271 -1 N LEU A 270 O ARG A 277 SHEET 3 AA3 3 ARG A 313 LYS A 315 -1 O ARG A 313 N VAL A 271 SHEET 1 AA4 2 ILE A 297 THR A 298 0 SHEET 2 AA4 2 ARG A 332 LEU A 334 -1 O LEU A 334 N ILE A 297 SHEET 1 AA5 2 GLU A 388 GLN A 389 0 SHEET 2 AA5 2 LYS A 392 ARG A 393 -1 O LYS A 392 N GLN A 389 SHEET 1 AA6 2 THR A 578 HIS A 582 0 SHEET 2 AA6 2 LYS A 597 LEU A 601 -1 O VAL A 600 N GLU A 579 SHEET 1 AA7 5 THR A 901 THR A 908 0 SHEET 2 AA7 5 ILE A 833 LYS A 840 -1 N LYS A 839 O ILE A 902 SHEET 3 AA7 5 ARG A 821 ILE A 826 -1 N GLY A 825 O GLN A 834 SHEET 4 AA7 5 THR A 919 TYR A 922 -1 O VAL A 920 N ARG A 821 SHEET 5 AA7 5 VAL A 911 LEU A 914 -1 N LEU A 914 O THR A 919 SHEET 1 AA8 2 LEU A 886 PRO A 889 0 SHEET 2 AA8 2 LEU A 895 ILE A 899 -1 O PRO A 897 N LYS A 888 SHEET 1 AA9 3 LYS A 937 TYR A 944 0 SHEET 2 AA9 3 ILE A 926 LYS A 934 -1 N PHE A 932 O TYR A 939 SHEET 3 AA9 3 THR A 975 LEU A 980 -1 O ARG A 977 N VAL A 931 SHEET 1 AB1 2 LYS A 956 ALA A 957 0 SHEET 2 AB1 2 LYS A 968 GLU A 969 -1 O LYS A 968 N ALA A 957 SHEET 1 AB2 6 SER A1033 GLY A1038 0 SHEET 2 AB2 6 GLY A1022 VAL A1026 -1 N LEU A1023 O ILE A1037 SHEET 3 AB2 6 GLU A1003 ILE A1016 -1 N TYR A1012 O VAL A1026 SHEET 4 AB2 6 ASP A 984 LYS A 997 -1 N ASP A 984 O TYR A1013 SHEET 5 AB2 6 ARG A1044 VAL A1050 -1 O TYR A1048 N LEU A 985 SHEET 6 AB2 6 ILE A1056 LYS A1058 -1 O TYR A1057 N GLN A1049 LINK O2' U B 95 NA NA B 202 1555 1555 2.60 LINK O4' U B 96 NA NA B 202 1555 1555 2.92 LINK O6 G B 99 NA NA B 202 1555 1555 3.02 CISPEP 1 GLY A 537 LEU A 538 0 -5.90 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8777 SER A1073 TER 9021 DT D 40 TER 9631 DC P 30 TER 12185 U B 146 HETATM12186 NA NA B 201 131.508 113.318 128.708 1.00 34.91 NA HETATM12187 NA NA B 202 126.039 103.573 139.495 1.00 41.59 NA HETATM12188 O HOH P 101 103.320 120.655 112.593 1.00 47.65 O HETATM12189 O HOH B 301 141.934 134.442 120.876 1.00 28.32 O CONECT1152312187 CONECT1153912187 CONECT1161612187 CONECT12187115231153911616 MASTER 270 0 2 41 35 0 0 612185 4 4 101 END