HEADER VIRAL PROTEIN 23-FEB-24 9ARP TITLE STRUCTURE AND INTERACTIONS OF HIV-1 GP41 CHR-NHR REVERSE HAIRPIN TITLE 2 CONSTRUCTS REVEAL MOLECULAR DETERMINANTS OF ANTIVIRAL ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN GP41; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 542-591 (UNIPROT NUMBERING), WITH N-TERMINAL COMPND 5 EXTENSION; COMPND 6 SYNONYM: TM,GLYCOPROTEIN 41,GP41; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 GENE: ENV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HIV, GP41, VIRUS, VIRAL PROTEIN, REVERSE HAIRPIN EXPDTA X-RAY DIFFRACTION AUTHOR R.P.MCANDREW,C.Y.RALSTON,M.GOCHIN REVDAT 1 05-MAR-25 9ARP 0 JRNL AUTH L.HE,R.MCANDREW,R.BARBU,G.GIFFORD,C.HALACOGLU, JRNL AUTH 2 C.DROUIN-ALLAIRE,L.WEBER,L.G.KRISTENSEN,S.GUPTA,Y.CHEN, JRNL AUTH 3 C.J.PETZOLD,M.ALLAIRE,K.H.LI,C.Y.RALSTON,M.GOCHIN JRNL TITL STRUCTURE AND INTERACTIONS OF HIV-1 GP41 CHR-NHR REVERSE JRNL TITL 2 HAIRPIN CONSTRUCTS REVEAL MOLECULAR DETERMINANTS OF JRNL TITL 3 ANTIVIRAL ACTIVITY. JRNL REF J.MOL.BIOL. V. 436 68650 2024 JRNL REFN ESSN 1089-8638 JRNL PMID 38866091 JRNL DOI 10.1016/J.JMB.2024.168650 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR., SECT. D: V. 75 861 2019 REMARK 1 REF 2 BIOL. CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_5246 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 6708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.324 REMARK 3 R VALUE (WORKING SET) : 0.321 REMARK 3 FREE R VALUE : 0.370 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6700 - 3.2300 0.99 2741 144 0.2700 0.3486 REMARK 3 2 3.2300 - 2.5700 1.00 2583 136 0.3390 0.3545 REMARK 3 3 2.5700 - 2.2400 1.00 2572 134 0.3927 0.3973 REMARK 3 4 2.2400 - 2.0400 0.89 2254 119 0.4246 0.4599 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.496 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 50.663 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1140 REMARK 3 ANGLE : 0.308 1535 REMARK 3 CHIRALITY : 0.025 182 REMARK 3 PLANARITY : 0.004 201 REMARK 3 DIHEDRAL : 19.159 437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5587 -8.5939 79.5124 REMARK 3 T TENSOR REMARK 3 T11: 0.2516 T22: 0.4408 REMARK 3 T33: 0.3525 T12: 0.1875 REMARK 3 T13: -0.0448 T23: 0.0958 REMARK 3 L TENSOR REMARK 3 L11: 0.8887 L22: 3.5366 REMARK 3 L33: 5.2750 L12: 1.4448 REMARK 3 L13: -0.7396 L23: -0.9252 REMARK 3 S TENSOR REMARK 3 S11: -0.3256 S12: -0.2673 S13: -0.5122 REMARK 3 S21: -0.8739 S22: -0.1368 S23: -0.0234 REMARK 3 S31: 0.2070 S32: 0.4555 S33: 0.1841 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3078 3.6214 59.5491 REMARK 3 T TENSOR REMARK 3 T11: 0.2361 T22: 0.2659 REMARK 3 T33: 0.1339 T12: 0.1514 REMARK 3 T13: 0.0170 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.4496 L22: 0.6795 REMARK 3 L33: 4.1546 L12: 0.4646 REMARK 3 L13: -0.5352 L23: -1.4940 REMARK 3 S TENSOR REMARK 3 S11: 0.0274 S12: -0.1287 S13: 0.0479 REMARK 3 S21: 0.1551 S22: 0.0503 S23: 0.0939 REMARK 3 S31: -0.6768 S32: 1.2334 S33: -0.0405 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8399 34.1371 -8.7994 REMARK 3 T TENSOR REMARK 3 T11: 0.9903 T22: 1.0384 REMARK 3 T33: 0.4642 T12: -0.1556 REMARK 3 T13: 0.1446 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.1327 L22: 1.3832 REMARK 3 L33: 2.8614 L12: 0.1885 REMARK 3 L13: -1.7850 L23: -0.0307 REMARK 3 S TENSOR REMARK 3 S11: 0.6308 S12: 0.3314 S13: 0.8474 REMARK 3 S21: -0.6006 S22: -0.3608 S23: -1.0652 REMARK 3 S31: -0.1908 S32: 0.8358 S33: -0.4051 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8928 22.2970 14.5982 REMARK 3 T TENSOR REMARK 3 T11: 0.5998 T22: 0.6530 REMARK 3 T33: 0.2835 T12: 0.0182 REMARK 3 T13: 0.0055 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.1607 L22: 1.6583 REMARK 3 L33: 6.6981 L12: 0.1544 REMARK 3 L13: 0.6754 L23: -0.5906 REMARK 3 S TENSOR REMARK 3 S11: -0.1559 S12: 0.4466 S13: -0.1134 REMARK 3 S21: -0.4676 S22: 0.0401 S23: -0.0592 REMARK 3 S31: 1.2415 S32: 0.1670 S33: -0.0797 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9ARP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 3.8.6 REMARK 200 DATA SCALING SOFTWARE : XIA2 3.8.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6708 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 44.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 17.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.99700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM AMMONIUM SULFATE, 100MM SODIUM REMARK 280 ACETATE, 25% W/V PEG 4000 AT PH 4.6, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 22.81850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 13.17427 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 133.99833 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 22.81850 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 13.17427 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 133.99833 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 22.81850 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 13.17427 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 133.99833 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 22.81850 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 13.17427 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 133.99833 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 22.81850 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 13.17427 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 133.99833 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 22.81850 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 13.17427 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 133.99833 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 26.34853 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 267.99667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 26.34853 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 267.99667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 26.34853 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 267.99667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 26.34853 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 267.99667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 26.34853 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 267.99667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 26.34853 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 267.99667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 22.81850 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 39.52280 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -22.81850 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 39.52280 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 119 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 122 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A -1 REMARK 465 GLU A 0 REMARK 465 ARG A 24 REMARK 465 GLU A 25 REMARK 465 LEU A 26 REMARK 465 ASP A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 GLY A 31 REMARK 465 ARG A 32 REMARK 465 LYS A 82 REMARK 465 ARG A 83 REMARK 465 PRO B -1 REMARK 465 GLU B 0 REMARK 465 TYR B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 ARG B 24 REMARK 465 GLU B 25 REMARK 465 LEU B 26 REMARK 465 ASP B 27 REMARK 465 SER B 28 REMARK 465 GLY B 29 REMARK 465 GLY B 30 REMARK 465 GLY B 31 REMARK 465 ARG B 32 REMARK 465 LYS B 82 REMARK 465 ARG B 83 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 13 CG CD OE1 NE2 REMARK 470 GLU B 17 CG CD OE1 OE2 REMARK 470 ARG B 47 CG CD NE CZ NH1 NH2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8W2Y RELATED DB: PDB REMARK 900 RELATED ID: 8W32 RELATED DB: PDB REMARK 900 RELATED ID: 8W37 RELATED DB: PDB REMARK 900 RELATED ID: 9ARN RELATED DB: PDB DBREF 9ARP A 32 81 UNP P04578 ENV_HV1H2 542 591 DBREF 9ARP B 32 81 UNP P04578 ENV_HV1H2 542 591 SEQADV 9ARP PRO A -1 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 0 UNP P04578 CLONING ARTIFACT SEQADV 9ARP TYR A 1 UNP P04578 CLONING ARTIFACT SEQADV 9ARP THR A 2 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER A 3 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG A 4 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ILE A 5 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 6 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER A 7 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU A 8 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ILE A 9 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG A 10 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 11 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ALA A 12 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN A 13 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASN A 14 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN A 15 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN A 16 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 17 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LYS A 18 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASN A 19 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 20 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN A 21 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ALA A 22 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU A 23 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG A 24 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU A 25 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU A 26 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASP A 27 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER A 28 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY A 29 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY A 30 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY A 31 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LYS A 82 UNP P04578 EXPRESSION TAG SEQADV 9ARP ARG A 83 UNP P04578 EXPRESSION TAG SEQADV 9ARP PRO B -1 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 0 UNP P04578 CLONING ARTIFACT SEQADV 9ARP TYR B 1 UNP P04578 CLONING ARTIFACT SEQADV 9ARP THR B 2 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER B 3 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG B 4 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ILE B 5 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 6 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER B 7 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU B 8 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ILE B 9 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG B 10 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 11 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ALA B 12 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN B 13 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASN B 14 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN B 15 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN B 16 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 17 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LYS B 18 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASN B 19 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 20 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLN B 21 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ALA B 22 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU B 23 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ARG B 24 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLU B 25 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LEU B 26 UNP P04578 CLONING ARTIFACT SEQADV 9ARP ASP B 27 UNP P04578 CLONING ARTIFACT SEQADV 9ARP SER B 28 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY B 29 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY B 30 UNP P04578 CLONING ARTIFACT SEQADV 9ARP GLY B 31 UNP P04578 CLONING ARTIFACT SEQADV 9ARP LYS B 82 UNP P04578 EXPRESSION TAG SEQADV 9ARP ARG B 83 UNP P04578 EXPRESSION TAG SEQRES 1 A 85 PRO GLU TYR THR SER ARG ILE GLU SER LEU ILE ARG GLU SEQRES 2 A 85 ALA GLN ASN GLN GLN GLU LYS ASN GLU GLN ALA LEU ARG SEQRES 3 A 85 GLU LEU ASP SER GLY GLY GLY ARG GLN LEU LEU SER GLY SEQRES 4 A 85 ILE VAL GLN GLN GLN ASN ASN LEU LEU ARG ALA ILE GLU SEQRES 5 A 85 ALA GLN GLN HIS LEU LEU GLN LEU THR VAL TRP GLY ILE SEQRES 6 A 85 LYS GLN LEU GLN ALA ARG ILE LEU ALA VAL GLU ARG TYR SEQRES 7 A 85 LEU LYS ASP GLN GLN LYS ARG SEQRES 1 B 85 PRO GLU TYR THR SER ARG ILE GLU SER LEU ILE ARG GLU SEQRES 2 B 85 ALA GLN ASN GLN GLN GLU LYS ASN GLU GLN ALA LEU ARG SEQRES 3 B 85 GLU LEU ASP SER GLY GLY GLY ARG GLN LEU LEU SER GLY SEQRES 4 B 85 ILE VAL GLN GLN GLN ASN ASN LEU LEU ARG ALA ILE GLU SEQRES 5 B 85 ALA GLN GLN HIS LEU LEU GLN LEU THR VAL TRP GLY ILE SEQRES 6 B 85 LYS GLN LEU GLN ALA ARG ILE LEU ALA VAL GLU ARG TYR SEQRES 7 B 85 LEU LYS ASP GLN GLN LYS ARG FORMUL 3 HOH *40(H2 O) HELIX 1 AA1 SER A 3 LEU A 23 1 21 HELIX 2 AA2 LEU A 34 GLN A 80 1 47 HELIX 3 AA3 ILE B 5 LEU B 23 1 19 HELIX 4 AA4 LEU B 34 GLN B 81 1 48 CRYST1 45.637 45.637 401.995 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021912 0.012651 0.000000 0.00000 SCALE2 0.000000 0.025302 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002488 0.00000 MASTER 414 0 0 4 0 0 0 6 1175 2 0 14 END