HEADER PROTEIN BINDING 13-MAR-24 9B1P TITLE MYCOLICIBACTERIUM SMEGMATIS CLPS WITH TRPSER DIPEPTIDE AND MG2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS; COMPND 3 CHAIN: A, B, F, G; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOLICIBACTERIUM SMEGMATIS MC2 155; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 GENE: CLPS, MSMEG_4910; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS PROTEOLYSIS, ADAPTOR, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.J.PRESLOID,J.JIANG,P.C.BEARDSLEE,H.R.ANDERSON,T.M.SWAYNE, AUTHOR 2 K.R.SCHMITZ REVDAT 1 11-DEC-24 9B1P 0 JRNL AUTH C.J.PRESLOID,J.JIANG,P.KANDEL,H.R.ANDERSON,P.C.BEARDSLEE, JRNL AUTH 2 T.M.SWAYNE,K.R.SCHMITZ JRNL TITL CLPS DIRECTS DEGRADATION OF N-DEGRON SUBSTRATES WITH PRIMARY JRNL TITL 2 DESTABILIZING RESIDUES IN MYCOLICIBACTERIUM SMEGMATIS. JRNL REF MOL.MICROBIOL. 2024 JRNL REFN ESSN 1365-2958 JRNL PMID 39626090 JRNL DOI 10.1111/MMI.15334 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 14209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.630 REMARK 3 FREE R VALUE TEST SET COUNT : 658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.8700 - 2.9800 1.00 3032 168 0.1502 0.1386 REMARK 3 2 2.9800 - 2.3700 1.00 2928 125 0.1719 0.2112 REMARK 3 3 2.3700 - 2.0700 1.00 2886 146 0.1817 0.2446 REMARK 3 4 2.0700 - 1.8800 0.99 2850 119 0.2095 0.2933 REMARK 3 5 1.8800 - 1.7500 0.65 1855 100 0.2437 0.2905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.194 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.681 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1303 REMARK 3 ANGLE : 0.854 1778 REMARK 3 CHIRALITY : 0.062 195 REMARK 3 PLANARITY : 0.010 222 REMARK 3 DIHEDRAL : 16.420 454 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9B1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000282450. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14280 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 14.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 12% PEG3350, 5 MM REMARK 280 NICL2 CRYO: 0.1 M HEPES PH 7.5, 40% PEG3350, 5 MM MGCL2, 2.5 MM REMARK 280 TRPSER PEPTIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.65650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.04800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 27.04800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.65650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP A 21 REMARK 465 SER A 22 REMARK 465 TRP B 21 REMARK 465 SER B 22 REMARK 465 THR B 23 REMARK 465 THR F 3 REMARK 465 GLU F 4 REMARK 465 ALA F 5 REMARK 465 PRO F 6 REMARK 465 TRP F 7 REMARK 465 VAL F 8 REMARK 465 THR F 9 REMARK 465 ILE F 10 REMARK 465 VAL F 11 REMARK 465 TRP F 12 REMARK 465 ASP F 13 REMARK 465 ASP F 14 REMARK 465 PRO F 15 REMARK 465 VAL F 16 REMARK 465 ASN F 17 REMARK 465 LEU F 18 REMARK 465 MET F 19 REMARK 465 SER F 20 REMARK 465 TYR F 21 REMARK 465 VAL F 22 REMARK 465 THR F 23 REMARK 465 TYR F 24 REMARK 465 VAL F 25 REMARK 465 PHE F 26 REMARK 465 GLN F 27 REMARK 465 LYS F 28 REMARK 465 LEU F 29 REMARK 465 PHE F 30 REMARK 465 GLY F 31 REMARK 465 TYR F 32 REMARK 465 SER F 33 REMARK 465 GLU F 34 REMARK 465 PRO F 35 REMARK 465 HIS F 36 REMARK 465 ALA F 37 REMARK 465 THR F 38 REMARK 465 LYS F 39 REMARK 465 LEU F 40 REMARK 465 MET F 41 REMARK 465 LEU F 42 REMARK 465 GLN F 43 REMARK 465 VAL F 44 REMARK 465 HIS F 45 REMARK 465 ASN F 46 REMARK 465 GLU F 47 REMARK 465 GLY F 48 REMARK 465 LYS F 49 REMARK 465 ALA F 50 REMARK 465 VAL F 51 REMARK 465 VAL F 52 REMARK 465 SER F 53 REMARK 465 ALA F 54 REMARK 465 GLY F 55 REMARK 465 SER F 56 REMARK 465 ARG F 57 REMARK 465 GLU F 58 REMARK 465 SER F 59 REMARK 465 MET F 60 REMARK 465 GLU F 61 REMARK 465 VAL F 62 REMARK 465 ASP F 63 REMARK 465 VAL F 64 REMARK 465 SER F 65 REMARK 465 LYS F 66 REMARK 465 LEU F 67 REMARK 465 HIS F 68 REMARK 465 ALA F 69 REMARK 465 ALA F 70 REMARK 465 GLY F 71 REMARK 465 LEU F 72 REMARK 465 TRP F 73 REMARK 465 ALA F 74 REMARK 465 THR F 75 REMARK 465 MET F 76 REMARK 465 GLN F 77 REMARK 465 GLN F 78 REMARK 465 ASP F 79 REMARK 465 ARG F 80 REMARK 465 THR G 3 REMARK 465 GLU G 4 REMARK 465 ALA G 5 REMARK 465 PRO G 6 REMARK 465 TRP G 7 REMARK 465 VAL G 8 REMARK 465 THR G 9 REMARK 465 ILE G 10 REMARK 465 VAL G 11 REMARK 465 TRP G 12 REMARK 465 ASP G 13 REMARK 465 ASP G 14 REMARK 465 PRO G 15 REMARK 465 VAL G 16 REMARK 465 ASN G 17 REMARK 465 LEU G 18 REMARK 465 MET G 19 REMARK 465 SER G 20 REMARK 465 TYR G 21 REMARK 465 VAL G 22 REMARK 465 THR G 23 REMARK 465 TYR G 24 REMARK 465 VAL G 25 REMARK 465 PHE G 26 REMARK 465 GLN G 27 REMARK 465 LYS G 28 REMARK 465 LEU G 29 REMARK 465 PHE G 30 REMARK 465 GLY G 31 REMARK 465 TYR G 32 REMARK 465 SER G 33 REMARK 465 GLU G 34 REMARK 465 PRO G 35 REMARK 465 HIS G 36 REMARK 465 ALA G 37 REMARK 465 THR G 38 REMARK 465 LYS G 39 REMARK 465 LEU G 40 REMARK 465 MET G 41 REMARK 465 LEU G 42 REMARK 465 GLN G 43 REMARK 465 VAL G 44 REMARK 465 HIS G 45 REMARK 465 ASN G 46 REMARK 465 GLU G 47 REMARK 465 GLY G 48 REMARK 465 LYS G 49 REMARK 465 ALA G 50 REMARK 465 VAL G 51 REMARK 465 VAL G 52 REMARK 465 SER G 53 REMARK 465 ALA G 54 REMARK 465 GLY G 55 REMARK 465 SER G 56 REMARK 465 ARG G 57 REMARK 465 GLU G 58 REMARK 465 SER G 59 REMARK 465 MET G 60 REMARK 465 GLU G 61 REMARK 465 VAL G 62 REMARK 465 ASP G 63 REMARK 465 VAL G 64 REMARK 465 SER G 65 REMARK 465 LYS G 66 REMARK 465 LEU G 67 REMARK 465 HIS G 68 REMARK 465 ALA G 69 REMARK 465 ALA G 70 REMARK 465 GLY G 71 REMARK 465 LEU G 72 REMARK 465 TRP G 73 REMARK 465 ALA G 74 REMARK 465 THR G 75 REMARK 465 MET G 76 REMARK 465 GLN G 77 REMARK 465 GLN G 78 REMARK 465 ASP G 79 REMARK 465 ARG G 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 23 OG1 CG2 REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 32 O REMARK 620 2 ASP A 34 OD2 108.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI F 101 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 NE2 REMARK 620 2 HOH A 308 O 88.6 REMARK 620 3 HOH A 310 O 89.5 90.8 REMARK 620 4 TRP F 1 N 97.3 94.9 171.2 REMARK 620 5 TRP F 1 O 91.9 178.6 90.5 83.8 REMARK 620 6 HOH F 202 O 172.0 86.2 84.6 89.1 93.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 81 OE2 REMARK 620 2 HOH A 329 O 44.3 REMARK 620 3 HOH B 306 O 41.0 3.7 REMARK 620 4 HOH B 340 O 42.1 3.0 3.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 ND1 REMARK 620 2 GLU B 78 OE1 15.2 REMARK 620 3 GLU B 81 OE1 18.2 4.0 REMARK 620 4 HOH B 302 O 14.6 1.5 5.5 REMARK 620 5 HOH B 307 O 18.6 3.6 4.4 4.0 REMARK 620 6 HOH B 352 O 17.7 2.9 1.4 4.3 3.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 99 OD1 REMARK 620 2 HOH A 305 O 94.7 REMARK 620 3 HOH A 335 O 84.3 81.4 REMARK 620 4 ASP B 99 OD1 172.7 91.3 92.5 REMARK 620 5 HOH B 310 O 96.0 83.2 164.6 88.8 REMARK 620 6 HOH B 345 O 91.8 162.7 115.3 83.6 80.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP B 32 O REMARK 620 2 ASP B 34 OD2 104.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI G 101 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 65 NE2 REMARK 620 2 HOH B 334 O 79.1 REMARK 620 3 TRP G 1 N 108.9 110.5 REMARK 620 4 TRP G 1 O 85.8 162.3 83.1 REMARK 620 5 HOH G 201 O 173.8 103.6 75.5 90.5 REMARK 620 6 HOH G 202 O 87.5 88.3 156.7 81.7 87.1 REMARK 620 N 1 2 3 4 5 DBREF 9B1P A 21 100 UNP A0R1X7 A0R1X7_MYCS2 21 100 DBREF 9B1P B 21 100 UNP A0R1X7 A0R1X7_MYCS2 21 100 DBREF 9B1P F 1 80 UNP A0R1X7 A0R1X7_MYCS2 21 100 DBREF 9B1P G 1 80 UNP A0R1X7 A0R1X7_MYCS2 21 100 SEQADV 9B1P TRP A 21 UNP A0R1X7 GLU 21 CONFLICT SEQADV 9B1P TRP B 21 UNP A0R1X7 GLU 21 CONFLICT SEQADV 9B1P TRP F 1 UNP A0R1X7 GLU 21 CONFLICT SEQADV 9B1P TRP G 1 UNP A0R1X7 GLU 21 CONFLICT SEQRES 1 A 80 TRP SER THR GLU ALA PRO TRP VAL THR ILE VAL TRP ASP SEQRES 2 A 80 ASP PRO VAL ASN LEU MET SER TYR VAL THR TYR VAL PHE SEQRES 3 A 80 GLN LYS LEU PHE GLY TYR SER GLU PRO HIS ALA THR LYS SEQRES 4 A 80 LEU MET LEU GLN VAL HIS ASN GLU GLY LYS ALA VAL VAL SEQRES 5 A 80 SER ALA GLY SER ARG GLU SER MET GLU VAL ASP VAL SER SEQRES 6 A 80 LYS LEU HIS ALA ALA GLY LEU TRP ALA THR MET GLN GLN SEQRES 7 A 80 ASP ARG SEQRES 1 B 80 TRP SER THR GLU ALA PRO TRP VAL THR ILE VAL TRP ASP SEQRES 2 B 80 ASP PRO VAL ASN LEU MET SER TYR VAL THR TYR VAL PHE SEQRES 3 B 80 GLN LYS LEU PHE GLY TYR SER GLU PRO HIS ALA THR LYS SEQRES 4 B 80 LEU MET LEU GLN VAL HIS ASN GLU GLY LYS ALA VAL VAL SEQRES 5 B 80 SER ALA GLY SER ARG GLU SER MET GLU VAL ASP VAL SER SEQRES 6 B 80 LYS LEU HIS ALA ALA GLY LEU TRP ALA THR MET GLN GLN SEQRES 7 B 80 ASP ARG SEQRES 1 F 80 TRP SER THR GLU ALA PRO TRP VAL THR ILE VAL TRP ASP SEQRES 2 F 80 ASP PRO VAL ASN LEU MET SER TYR VAL THR TYR VAL PHE SEQRES 3 F 80 GLN LYS LEU PHE GLY TYR SER GLU PRO HIS ALA THR LYS SEQRES 4 F 80 LEU MET LEU GLN VAL HIS ASN GLU GLY LYS ALA VAL VAL SEQRES 5 F 80 SER ALA GLY SER ARG GLU SER MET GLU VAL ASP VAL SER SEQRES 6 F 80 LYS LEU HIS ALA ALA GLY LEU TRP ALA THR MET GLN GLN SEQRES 7 F 80 ASP ARG SEQRES 1 G 80 TRP SER THR GLU ALA PRO TRP VAL THR ILE VAL TRP ASP SEQRES 2 G 80 ASP PRO VAL ASN LEU MET SER TYR VAL THR TYR VAL PHE SEQRES 3 G 80 GLN LYS LEU PHE GLY TYR SER GLU PRO HIS ALA THR LYS SEQRES 4 G 80 LEU MET LEU GLN VAL HIS ASN GLU GLY LYS ALA VAL VAL SEQRES 5 G 80 SER ALA GLY SER ARG GLU SER MET GLU VAL ASP VAL SER SEQRES 6 G 80 LYS LEU HIS ALA ALA GLY LEU TRP ALA THR MET GLN GLN SEQRES 7 G 80 ASP ARG HET MG A 201 1 HET MG A 202 1 HET NI B 201 1 HET MG B 202 1 HET MG B 203 1 HET NI F 101 1 HET NI G 101 1 HETNAM MG MAGNESIUM ION HETNAM NI NICKEL (II) ION FORMUL 5 MG 4(MG 2+) FORMUL 7 NI 3(NI 2+) FORMUL 12 HOH *232(H2 O) HELIX 1 AA1 LEU A 38 GLY A 51 1 14 HELIX 2 AA2 SER A 53 GLY A 68 1 16 HELIX 3 AA3 SER A 76 ALA A 90 1 15 HELIX 4 AA4 LEU B 38 GLY B 51 1 14 HELIX 5 AA5 SER B 53 GLY B 68 1 16 HELIX 6 AA6 SER B 76 ALA B 90 1 15 SHEET 1 AA1 3 LYS A 69 GLY A 75 0 SHEET 2 AA1 3 TRP A 27 TRP A 32 -1 N TRP A 27 O GLY A 75 SHEET 3 AA1 3 TRP A 93 GLN A 98 -1 O THR A 95 N ILE A 30 SHEET 1 AA2 3 LYS B 69 GLY B 75 0 SHEET 2 AA2 3 TRP B 27 TRP B 32 -1 N TRP B 27 O GLY B 75 SHEET 3 AA2 3 TRP B 93 GLN B 98 -1 O TRP B 93 N TRP B 32 LINK O TRP A 32 MG MG A 202 1555 1555 2.72 LINK OD2 ASP A 34 MG MG A 202 1555 1555 2.60 LINK NE2 HIS A 65 NI NI F 101 1555 1555 1.98 LINK OE2 GLU A 81 MG MG B 202 1555 3545 1.96 LINK ND1 HIS A 88 NI NI B 201 1555 4545 2.10 LINK OD1 ASP A 99 MG MG A 201 1555 1555 2.05 LINK MG MG A 201 O HOH A 305 1555 1555 2.18 LINK MG MG A 201 O HOH A 335 1555 1555 2.06 LINK MG MG A 201 OD1 ASP B 99 1555 1555 2.16 LINK MG MG A 201 O HOH B 310 1555 1555 2.05 LINK MG MG A 201 O HOH B 345 1555 1555 2.12 LINK O HOH A 308 NI NI F 101 1555 1555 2.20 LINK O HOH A 310 NI NI F 101 4445 1555 2.24 LINK O HOH A 329 MG MG B 202 3555 1555 2.03 LINK O TRP B 32 MG MG B 203 1555 1555 2.85 LINK OD2 ASP B 34 MG MG B 203 1555 1555 2.44 LINK NE2 HIS B 65 NI NI G 101 1555 1555 1.92 LINK OE1 GLU B 78 NI NI B 201 1555 1555 1.98 LINK OE1 GLU B 81 NI NI B 201 1555 1555 2.05 LINK NI NI B 201 O HOH B 302 1555 1555 2.10 LINK NI NI B 201 O HOH B 307 1555 1555 2.22 LINK NI NI B 201 O HOH B 352 1555 1555 2.10 LINK MG MG B 202 O HOH B 306 1555 1555 1.93 LINK MG MG B 202 O HOH B 340 1555 1555 2.15 LINK O HOH B 334 NI NI G 101 1555 1555 2.38 LINK N TRP F 1 NI NI F 101 1555 1555 2.02 LINK O TRP F 1 NI NI F 101 1555 1555 2.04 LINK NI NI F 101 O HOH F 202 1555 1555 2.01 LINK N TRP G 1 NI NI G 101 1555 1555 2.04 LINK O TRP G 1 NI NI G 101 1555 1555 2.07 LINK NI NI G 101 O HOH G 201 1555 1555 2.10 LINK NI NI G 101 O HOH G 202 1555 1555 2.20 CRYST1 51.313 52.600 54.096 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019488 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018486 0.00000