HEADER MEMBRANE PROTEIN,LYASE/SUBSTRATE 17-MAY-24 9BUR TITLE STRUCTURE OF GGCX-BGP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAMMA-GLUTAMYL CARBOXYLASE,PEPTIDYL-GLUTAMATE 4-CARBOXYLASE, COMPND 5 VITAMIN K GAMMA GLUTAMYL CARBOXYLASE; COMPND 6 EC: 4.1.1.90; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: OSTEOCALCIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: BONE GLA PROTEIN,BGP,GAMMA-CARBOXYGLUTAMIC ACID-CONTAINING COMPND 12 PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GGCX, GC; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: BGLAP; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS VITAMIN K CYCLE, MEMBRANE PROTEIN, LYASE-SUBSTRATE COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR R.WANG,X.QI REVDAT 3 26-MAR-25 9BUR 1 JRNL REVDAT 2 12-FEB-25 9BUR 1 JRNL REVDAT 1 29-JAN-25 9BUR 0 JRNL AUTH R.WANG,B.CHEN,N.ELGHOBASHI-MEINHARDT,J.K.TIE,A.AYALA,N.ZHOU, JRNL AUTH 2 X.QI JRNL TITL STRUCTURE AND MECHANISM OF VITAMIN-K-DEPENDENT JRNL TITL 2 GAMMA-GLUTAMYL CARBOXYLASE. JRNL REF NATURE V. 639 808 2025 JRNL REFN ESSN 1476-4687 JRNL PMID 39880952 JRNL DOI 10.1038/S41586-024-08484-9 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.950 REMARK 3 NUMBER OF PARTICLES : 218162 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9BUR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1000281039. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : GGCX-BGP COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, d REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 ASP A 15 REMARK 465 LYS A 16 REMARK 465 VAL A 17 REMARK 465 GLN A 18 REMARK 465 LYS A 19 REMARK 465 ASP A 20 REMARK 465 LYS A 21 REMARK 465 ALA A 22 REMARK 465 GLU A 23 REMARK 465 LEU A 24 REMARK 465 ILE A 25 REMARK 465 SER A 26 REMARK 465 GLY A 27 REMARK 465 PRO A 28 REMARK 465 ARG A 29 REMARK 465 GLN A 30 REMARK 465 SER A 348 REMARK 465 ARG A 349 REMARK 465 GLY A 350 REMARK 465 LYS A 351 REMARK 465 SER A 352 REMARK 465 GLY A 353 REMARK 465 VAL A 625 REMARK 465 GLU A 626 REMARK 465 ASN A 627 REMARK 465 GLY A 628 REMARK 465 SER A 629 REMARK 465 GLU A 630 REMARK 465 THR A 631 REMARK 465 GLY A 632 REMARK 465 PRO A 633 REMARK 465 LEU A 634 REMARK 465 PRO A 635 REMARK 465 PRO A 636 REMARK 465 GLU A 637 REMARK 465 LEU A 638 REMARK 465 GLN A 639 REMARK 465 PRO A 640 REMARK 465 LEU A 641 REMARK 465 LEU A 642 REMARK 465 GLU A 643 REMARK 465 GLY A 644 REMARK 465 GLU A 645 REMARK 465 VAL A 646 REMARK 465 LYS A 647 REMARK 465 GLY A 648 REMARK 465 GLY A 649 REMARK 465 PRO A 650 REMARK 465 GLU A 651 REMARK 465 PRO A 652 REMARK 465 PHE A 728 REMARK 465 GLU A 729 REMARK 465 ALA A 730 REMARK 465 VAL A 731 REMARK 465 GLY A 732 REMARK 465 GLU A 733 REMARK 465 LEU A 734 REMARK 465 ASN A 735 REMARK 465 PRO A 736 REMARK 465 SER A 737 REMARK 465 ASN A 738 REMARK 465 THR A 739 REMARK 465 ASP A 740 REMARK 465 SER A 741 REMARK 465 SER A 742 REMARK 465 HIS A 743 REMARK 465 SER A 744 REMARK 465 ASN A 745 REMARK 465 PRO A 746 REMARK 465 PRO A 747 REMARK 465 GLU A 748 REMARK 465 SER A 749 REMARK 465 ASN A 750 REMARK 465 PRO A 751 REMARK 465 ASP A 752 REMARK 465 PRO A 753 REMARK 465 VAL A 754 REMARK 465 HIS A 755 REMARK 465 SER A 756 REMARK 465 GLU A 757 REMARK 465 PHE A 758 REMARK 465 ASP A 759 REMARK 465 TYR A 760 REMARK 465 LYS A 761 REMARK 465 ASP A 762 REMARK 465 ASP A 763 REMARK 465 ASP A 764 REMARK 465 ASP A 765 REMARK 465 LYS A 766 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 THR B 5 REMARK 465 LEU B 6 REMARK 465 LEU B 7 REMARK 465 ALA B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 ALA B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 LEU B 15 REMARK 465 CYS B 16 REMARK 465 ILE B 17 REMARK 465 ALA B 18 REMARK 465 GLY B 19 REMARK 465 GLN B 20 REMARK 465 ALA B 21 REMARK 465 GLY B 22 REMARK 465 ALA B 23 REMARK 465 LYS B 24 REMARK 465 PRO B 25 REMARK 465 SER B 26 REMARK 465 GLY B 27 REMARK 465 ALA B 28 REMARK 465 GLU B 29 REMARK 465 SER B 30 REMARK 465 SER B 31 REMARK 465 LYS B 32 REMARK 465 ARG B 48 REMARK 465 PRO B 49 REMARK 465 ARG B 50 REMARK 465 ARG B 51 REMARK 465 TYR B 52 REMARK 465 LEU B 53 REMARK 465 TYR B 54 REMARK 465 GLN B 55 REMARK 465 TRP B 56 REMARK 465 LEU B 57 REMARK 465 GLY B 58 REMARK 465 ALA B 59 REMARK 465 PRO B 60 REMARK 465 VAL B 61 REMARK 465 PRO B 62 REMARK 465 TYR B 63 REMARK 465 ARG B 71 REMARK 465 GLU B 72 REMARK 465 VAL B 73 REMARK 465 CYS B 74 REMARK 465 GLU B 75 REMARK 465 LEU B 76 REMARK 465 ASN B 77 REMARK 465 PRO B 78 REMARK 465 ASP B 79 REMARK 465 CYS B 80 REMARK 465 HIS B 101 REMARK 465 HIS B 102 REMARK 465 HIS B 103 REMARK 465 HIS B 104 REMARK 465 HIS B 105 REMARK 465 HIS B 106 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 653 OG1 CG2 REMARK 470 PRO A 654 CG CD REMARK 470 LEU A 655 CG CD1 CD2 REMARK 470 VAL A 656 CG1 CG2 REMARK 470 GLN A 657 CG CD OE1 NE2 REMARK 470 THR A 658 OG1 CG2 REMARK 470 PHE A 659 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 660 CG CD1 CD2 REMARK 470 ARG A 661 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 662 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 663 CG CD OE1 NE2 REMARK 470 GLN A 664 CG CD OE1 NE2 REMARK 470 ARG A 665 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 666 CG CD1 CD2 REMARK 470 GLN A 667 CG CD OE1 NE2 REMARK 470 GLU A 668 CG CD OE1 OE2 REMARK 470 ILE A 669 CG1 CG2 CD1 REMARK 470 GLU A 670 CG CD OE1 OE2 REMARK 470 ARG A 671 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 81 -60.91 -91.52 REMARK 500 ASN A 389 -158.13 -135.18 REMARK 500 ARG A 416 117.41 -160.26 REMARK 500 ILE A 707 -62.55 -94.08 REMARK 500 LYS B 39 46.36 -94.22 REMARK 500 GLU B 82 -74.49 -64.17 REMARK 500 LEU B 83 -8.24 62.53 REMARK 500 ASP B 85 52.40 -91.81 REMARK 500 TYR B 97 -166.37 -119.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 POV A 1204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-44912 RELATED DB: EMDB REMARK 900 STRUCTURE OF GGCX REMARK 900 RELATED ID: EMD-44917 RELATED DB: EMDB REMARK 900 STRUCTURE OF GGCX-BGP COMPLEX DBREF 9BUR A 1 758 UNP P38435 VKGC_HUMAN 1 758 DBREF 9BUR B 1 100 UNP P02818 OSTCN_HUMAN 1 100 SEQADV 9BUR ASP A 759 UNP P38435 EXPRESSION TAG SEQADV 9BUR TYR A 760 UNP P38435 EXPRESSION TAG SEQADV 9BUR LYS A 761 UNP P38435 EXPRESSION TAG SEQADV 9BUR ASP A 762 UNP P38435 EXPRESSION TAG SEQADV 9BUR ASP A 763 UNP P38435 EXPRESSION TAG SEQADV 9BUR ASP A 764 UNP P38435 EXPRESSION TAG SEQADV 9BUR ASP A 765 UNP P38435 EXPRESSION TAG SEQADV 9BUR LYS A 766 UNP P38435 EXPRESSION TAG SEQADV 9BUR HIS B 101 UNP P02818 EXPRESSION TAG SEQADV 9BUR HIS B 102 UNP P02818 EXPRESSION TAG SEQADV 9BUR HIS B 103 UNP P02818 EXPRESSION TAG SEQADV 9BUR HIS B 104 UNP P02818 EXPRESSION TAG SEQADV 9BUR HIS B 105 UNP P02818 EXPRESSION TAG SEQADV 9BUR HIS B 106 UNP P02818 EXPRESSION TAG SEQRES 1 A 766 MET ALA VAL SER ALA GLY SER ALA ARG THR SER PRO SER SEQRES 2 A 766 SER ASP LYS VAL GLN LYS ASP LYS ALA GLU LEU ILE SER SEQRES 3 A 766 GLY PRO ARG GLN ASP SER ARG ILE GLY LYS LEU LEU GLY SEQRES 4 A 766 PHE GLU TRP THR ASP LEU SER SER TRP ARG ARG LEU VAL SEQRES 5 A 766 THR LEU LEU ASN ARG PRO THR ASP PRO ALA SER LEU ALA SEQRES 6 A 766 VAL PHE ARG PHE LEU PHE GLY PHE LEU MET VAL LEU ASP SEQRES 7 A 766 ILE PRO GLN GLU ARG GLY LEU SER SER LEU ASP ARG LYS SEQRES 8 A 766 TYR LEU ASP GLY LEU ASP VAL CYS ARG PHE PRO LEU LEU SEQRES 9 A 766 ASP ALA LEU ARG PRO LEU PRO LEU ASP TRP MET TYR LEU SEQRES 10 A 766 VAL TYR THR ILE MET PHE LEU GLY ALA LEU GLY MET MET SEQRES 11 A 766 LEU GLY LEU CYS TYR ARG ILE SER CYS VAL LEU PHE LEU SEQRES 12 A 766 LEU PRO TYR TRP TYR VAL PHE LEU LEU ASP LYS THR SER SEQRES 13 A 766 TRP ASN ASN HIS SER TYR LEU TYR GLY LEU LEU ALA PHE SEQRES 14 A 766 GLN LEU THR PHE MET ASP ALA ASN HIS TYR TRP SER VAL SEQRES 15 A 766 ASP GLY LEU LEU ASN ALA HIS ARG ARG ASN ALA HIS VAL SEQRES 16 A 766 PRO LEU TRP ASN TYR ALA VAL LEU ARG GLY GLN ILE PHE SEQRES 17 A 766 ILE VAL TYR PHE ILE ALA GLY VAL LYS LYS LEU ASP ALA SEQRES 18 A 766 ASP TRP VAL GLU GLY TYR SER MET GLU TYR LEU SER ARG SEQRES 19 A 766 HIS TRP LEU PHE SER PRO PHE LYS LEU LEU LEU SER GLU SEQRES 20 A 766 GLU LEU THR SER LEU LEU VAL VAL HIS TRP GLY GLY LEU SEQRES 21 A 766 LEU LEU ASP LEU SER ALA GLY PHE LEU LEU PHE PHE ASP SEQRES 22 A 766 VAL SER ARG SER ILE GLY LEU PHE PHE VAL SER TYR PHE SEQRES 23 A 766 HIS CYS MET ASN SER GLN LEU PHE SER ILE GLY MET PHE SEQRES 24 A 766 SER TYR VAL MET LEU ALA SER SER PRO LEU PHE CYS SER SEQRES 25 A 766 PRO GLU TRP PRO ARG LYS LEU VAL SER TYR CYS PRO ARG SEQRES 26 A 766 ARG LEU GLN GLN LEU LEU PRO LEU LYS ALA ALA PRO GLN SEQRES 27 A 766 PRO SER VAL SER CYS VAL TYR LYS ARG SER ARG GLY LYS SEQRES 28 A 766 SER GLY GLN LYS PRO GLY LEU ARG HIS GLN LEU GLY ALA SEQRES 29 A 766 ALA PHE THR LEU LEU TYR LEU LEU GLU GLN LEU PHE LEU SEQRES 30 A 766 PRO TYR SER HIS PHE LEU THR GLN GLY TYR ASN ASN TRP SEQRES 31 A 766 THR ASN GLY LEU TYR GLY TYR SER TRP ASP MET MET VAL SEQRES 32 A 766 HIS SER ARG SER HIS GLN HIS VAL LYS ILE THR TYR ARG SEQRES 33 A 766 ASP GLY ARG THR GLY GLU LEU GLY TYR LEU ASN PRO GLY SEQRES 34 A 766 VAL PHE THR GLN SER ARG ARG TRP LYS ASP HIS ALA ASP SEQRES 35 A 766 MET LEU LYS GLN TYR ALA THR CYS LEU SER ARG LEU LEU SEQRES 36 A 766 PRO LYS TYR ASN VAL THR GLU PRO GLN ILE TYR PHE ASP SEQRES 37 A 766 ILE TRP VAL SER ILE ASN ASP ARG PHE GLN GLN ARG ILE SEQRES 38 A 766 PHE ASP PRO ARG VAL ASP ILE VAL GLN ALA ALA TRP SER SEQRES 39 A 766 PRO PHE GLN ARG THR SER TRP VAL GLN PRO LEU LEU MET SEQRES 40 A 766 ASP LEU SER PRO TRP ARG ALA LYS LEU GLN GLU ILE LYS SEQRES 41 A 766 SER SER LEU ASP ASN HIS THR GLU VAL VAL PHE ILE ALA SEQRES 42 A 766 ASP PHE PRO GLY LEU HIS LEU GLU ASN PHE VAL SER GLU SEQRES 43 A 766 ASP LEU GLY ASN THR SER ILE GLN LEU LEU GLN GLY GLU SEQRES 44 A 766 VAL THR VAL GLU LEU VAL ALA GLU GLN LYS ASN GLN THR SEQRES 45 A 766 LEU ARG GLU GLY GLU LYS MET GLN LEU PRO ALA GLY GLU SEQRES 46 A 766 TYR HIS LYS VAL TYR THR THR SER PRO SER PRO SER CYS SEQRES 47 A 766 TYR MET TYR VAL TYR VAL ASN THR THR GLU LEU ALA LEU SEQRES 48 A 766 GLU GLN ASP LEU ALA TYR LEU GLN GLU LEU LYS GLU LYS SEQRES 49 A 766 VAL GLU ASN GLY SER GLU THR GLY PRO LEU PRO PRO GLU SEQRES 50 A 766 LEU GLN PRO LEU LEU GLU GLY GLU VAL LYS GLY GLY PRO SEQRES 51 A 766 GLU PRO THR PRO LEU VAL GLN THR PHE LEU ARG ARG GLN SEQRES 52 A 766 GLN ARG LEU GLN GLU ILE GLU ARG ARG ARG ASN THR PRO SEQRES 53 A 766 PHE HIS GLU ARG PHE PHE ARG PHE LEU LEU ARG LYS LEU SEQRES 54 A 766 TYR VAL PHE ARG ARG SER PHE LEU MET THR CYS ILE SER SEQRES 55 A 766 LEU ARG ASN LEU ILE LEU GLY ARG PRO SER LEU GLU GLN SEQRES 56 A 766 LEU ALA GLN GLU VAL THR TYR ALA ASN LEU ARG PRO PHE SEQRES 57 A 766 GLU ALA VAL GLY GLU LEU ASN PRO SER ASN THR ASP SER SEQRES 58 A 766 SER HIS SER ASN PRO PRO GLU SER ASN PRO ASP PRO VAL SEQRES 59 A 766 HIS SER GLU PHE ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 1 B 106 MET ARG ALA LEU THR LEU LEU ALA LEU LEU ALA LEU ALA SEQRES 2 B 106 ALA LEU CYS ILE ALA GLY GLN ALA GLY ALA LYS PRO SER SEQRES 3 B 106 GLY ALA GLU SER SER LYS GLY ALA ALA PHE VAL SER LYS SEQRES 4 B 106 GLN GLU GLY SER GLU VAL VAL LYS ARG PRO ARG ARG TYR SEQRES 5 B 106 LEU TYR GLN TRP LEU GLY ALA PRO VAL PRO TYR PRO ASP SEQRES 6 B 106 PRO LEU GLU PRO ARG ARG GLU VAL CYS GLU LEU ASN PRO SEQRES 7 B 106 ASP CYS ASP GLU LEU ALA ASP HIS ILE GLY PHE GLN GLU SEQRES 8 B 106 ALA TYR ARG ARG PHE TYR GLY PRO VAL HIS HIS HIS HIS SEQRES 9 B 106 HIS HIS HET NAG d 1 14 HET NAG d 2 14 HET NAG A1201 14 HET NAG A1202 14 HET CLR A1203 28 HET POV A1204 37 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CLR CHOLESTEROL HETNAM POV (2S)-3-(HEXADECANOYLOXY)-2-[(9Z)-OCTADEC-9- HETNAM 2 POV ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL PHOSPHATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN POV POPC FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 6 CLR C27 H46 O FORMUL 7 POV C42 H82 N O8 P HELIX 1 AA1 SER A 32 GLY A 39 1 8 HELIX 2 AA2 SER A 47 ASN A 56 1 10 HELIX 3 AA3 PRO A 61 LEU A 77 1 17 HELIX 4 AA4 LEU A 77 GLU A 82 1 6 HELIX 5 AA5 SER A 87 TYR A 92 1 6 HELIX 6 AA6 PRO A 111 GLY A 132 1 22 HELIX 7 AA7 CYS A 134 LEU A 152 1 19 HELIX 8 AA8 ASP A 153 TRP A 157 5 5 HELIX 9 AA9 HIS A 160 LEU A 171 1 12 HELIX 10 AB1 SER A 181 ASN A 187 1 7 HELIX 11 AB2 LEU A 197 LYS A 218 1 22 HELIX 12 AB3 ASP A 220 GLU A 225 1 6 HELIX 13 AB4 TYR A 231 LEU A 244 5 14 HELIX 14 AB5 SER A 246 VAL A 254 1 9 HELIX 15 AB6 HIS A 256 LEU A 264 1 9 HELIX 16 AB7 SER A 275 PHE A 294 1 20 HELIX 17 AB8 MET A 298 SER A 307 1 10 HELIX 18 AB9 PRO A 308 CYS A 311 5 4 HELIX 19 AC1 PRO A 316 SER A 321 1 6 HELIX 20 AC2 ARG A 326 LEU A 330 5 5 HELIX 21 AC3 GLY A 357 LEU A 362 1 6 HELIX 22 AC4 LEU A 362 LEU A 377 1 16 HELIX 23 AC5 PRO A 378 LEU A 383 5 6 HELIX 24 AC6 HIS A 440 LEU A 455 1 16 HELIX 25 AC7 PRO A 456 ASN A 459 5 4 HELIX 26 AC8 LEU A 506 PRO A 511 5 6 HELIX 27 AC9 TRP A 512 LEU A 523 1 12 HELIX 28 AD1 ASN A 605 GLU A 612 1 8 HELIX 29 AD2 ASP A 614 GLN A 619 1 6 HELIX 30 AD3 PRO A 654 ILE A 669 1 16 HELIX 31 AD4 PRO A 676 LEU A 708 1 33 HELIX 32 AD5 SER A 712 ASN A 724 1 13 HELIX 33 AD6 GLY B 88 TYR B 97 1 10 SHEET 1 AA1 5 GLN A 479 ARG A 480 0 SHEET 2 AA1 5 TYR A 466 ILE A 473 -1 N VAL A 471 O GLN A 479 SHEET 3 AA1 5 ARG A 406 ARG A 416 -1 N GLN A 409 O TRP A 470 SHEET 4 AA1 5 LEU A 423 LEU A 426 -1 O LEU A 426 N ILE A 413 SHEET 5 AA1 5 PHE B 36 VAL B 37 -1 O VAL B 37 N TYR A 425 SHEET 1 AA2 4 THR A 527 ASP A 534 0 SHEET 2 AA2 4 SER A 597 VAL A 604 -1 O TYR A 599 N ILE A 532 SHEET 3 AA2 4 THR A 551 GLN A 557 -1 N GLN A 557 O CYS A 598 SHEET 4 AA2 4 LYS A 578 LEU A 581 -1 O LEU A 581 N THR A 551 SHEET 1 AA3 4 HIS A 539 PHE A 543 0 SHEET 2 AA3 4 TYR A 586 THR A 591 -1 O HIS A 587 N ASN A 542 SHEET 3 AA3 4 VAL A 560 LEU A 564 -1 N GLU A 563 O LYS A 588 SHEET 4 AA3 4 LYS A 569 LEU A 573 -1 O LYS A 569 N LEU A 564 SSBOND 1 CYS A 99 CYS A 450 1555 1555 2.03 LINK ND2 ASN A 550 C1 NAG A1201 1555 1555 1.44 LINK ND2 ASN A 570 C1 NAG d 1 1555 1555 1.44 LINK ND2 ASN A 605 C1 NAG A1202 1555 1555 1.44 LINK O4 NAG d 1 C1 NAG d 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 5424 PRO A 727 TER 5758 VAL B 100 HETATM 5759 C1 NAG d 1 140.500 113.028 69.452 1.00 79.07 C HETATM 5760 C2 NAG d 1 142.016 112.889 69.523 1.00 79.07 C HETATM 5761 C3 NAG d 1 142.518 113.290 70.912 1.00 79.07 C HETATM 5762 C4 NAG d 1 142.016 114.680 71.298 1.00 79.07 C HETATM 5763 C5 NAG d 1 140.498 114.739 71.150 1.00 79.07 C HETATM 5764 C6 NAG d 1 139.923 116.115 71.394 1.00 79.07 C HETATM 5765 C7 NAG d 1 142.782 111.143 67.974 1.00 79.07 C HETATM 5766 C8 NAG d 1 143.183 109.708 67.831 1.00 79.07 C HETATM 5767 N2 NAG d 1 142.428 111.532 69.204 1.00 79.07 N HETATM 5768 O3 NAG d 1 143.940 113.233 70.925 1.00 79.07 O HETATM 5769 O4 NAG d 1 142.331 114.970 72.656 1.00 79.07 O HETATM 5770 O5 NAG d 1 140.122 114.363 69.817 1.00 79.07 O HETATM 5771 O6 NAG d 1 140.797 117.137 70.938 1.00 79.07 O HETATM 5772 O7 NAG d 1 142.775 111.915 67.021 1.00 79.07 O HETATM 5773 C1 NAG d 2 143.437 115.888 72.768 1.00 81.72 C HETATM 5774 C2 NAG d 2 143.284 116.760 74.017 1.00 81.72 C HETATM 5775 C3 NAG d 2 144.505 117.660 74.188 1.00 81.72 C HETATM 5776 C4 NAG d 2 145.786 116.834 74.199 1.00 81.72 C HETATM 5777 C5 NAG d 2 145.858 115.962 72.947 1.00 81.72 C HETATM 5778 C6 NAG d 2 147.032 115.011 72.958 1.00 81.72 C HETATM 5779 C7 NAG d 2 141.317 117.837 75.018 1.00 81.72 C HETATM 5780 C8 NAG d 2 140.101 118.675 74.764 1.00 81.72 C HETATM 5781 N2 NAG d 2 142.070 117.560 73.949 1.00 81.72 N HETATM 5782 O3 NAG d 2 144.386 118.389 75.403 1.00 81.72 O HETATM 5783 O4 NAG d 2 146.917 117.697 74.232 1.00 81.72 O HETATM 5784 O5 NAG d 2 144.674 115.155 72.841 1.00 81.72 O HETATM 5785 O6 NAG d 2 146.759 113.852 73.735 1.00 81.72 O HETATM 5786 O7 NAG d 2 141.605 117.432 76.138 1.00 81.72 O HETATM 5787 C1 NAG A1201 120.003 98.869 70.364 1.00 90.21 C HETATM 5788 C2 NAG A1201 119.362 98.253 69.117 1.00 90.21 C HETATM 5789 C3 NAG A1201 118.457 99.277 68.432 1.00 90.21 C HETATM 5790 C4 NAG A1201 117.440 99.842 69.416 1.00 90.21 C HETATM 5791 C5 NAG A1201 118.147 100.394 70.653 1.00 90.21 C HETATM 5792 C6 NAG A1201 117.188 100.856 71.724 1.00 90.21 C HETATM 5793 C7 NAG A1201 120.759 96.489 68.137 1.00 90.21 C HETATM 5794 C8 NAG A1201 121.818 96.166 67.127 1.00 90.21 C HETATM 5795 N2 NAG A1201 120.374 97.768 68.192 1.00 90.21 N HETATM 5796 O3 NAG A1201 117.789 98.664 67.336 1.00 90.21 O HETATM 5797 O4 NAG A1201 116.694 100.886 68.800 1.00 90.21 O HETATM 5798 O5 NAG A1201 118.970 99.374 71.242 1.00 90.21 O HETATM 5799 O6 NAG A1201 115.941 101.250 71.167 1.00 90.21 O HETATM 5800 O7 NAG A1201 120.277 95.632 68.871 1.00 90.21 O HETATM 5801 C1 NAG A1202 124.629 93.012 83.371 1.00 98.72 C HETATM 5802 C2 NAG A1202 125.455 93.809 84.390 1.00 98.72 C HETATM 5803 C3 NAG A1202 126.350 92.871 85.203 1.00 98.72 C HETATM 5804 C4 NAG A1202 125.530 91.755 85.834 1.00 98.72 C HETATM 5805 C5 NAG A1202 124.743 91.021 84.754 1.00 98.72 C HETATM 5806 C6 NAG A1202 123.824 89.961 85.311 1.00 98.72 C HETATM 5807 C7 NAG A1202 126.510 96.019 84.286 1.00 98.72 C HETATM 5808 C8 NAG A1202 127.355 96.953 83.477 1.00 98.72 C HETATM 5809 N2 NAG A1202 126.253 94.830 83.733 1.00 98.72 N HETATM 5810 O3 NAG A1202 127.022 93.608 86.218 1.00 98.72 O HETATM 5811 O4 NAG A1202 126.384 90.836 86.506 1.00 98.72 O HETATM 5812 O5 NAG A1202 123.914 91.955 84.045 1.00 98.72 O HETATM 5813 O6 NAG A1202 123.758 88.831 84.452 1.00 98.72 O HETATM 5814 O7 NAG A1202 126.081 96.323 85.393 1.00 98.72 O HETATM 5815 C1 CLR A1203 127.122 124.797 118.400 1.00 38.89 C HETATM 5816 C2 CLR A1203 126.149 125.524 117.479 1.00 38.89 C HETATM 5817 C3 CLR A1203 124.728 125.187 117.890 1.00 38.89 C HETATM 5818 C4 CLR A1203 124.494 125.733 119.287 1.00 38.89 C HETATM 5819 C5 CLR A1203 125.419 124.993 120.210 1.00 38.89 C HETATM 5820 C6 CLR A1203 124.921 124.355 121.280 1.00 38.89 C HETATM 5821 C7 CLR A1203 125.764 123.445 122.144 1.00 38.89 C HETATM 5822 C8 CLR A1203 127.247 123.777 122.088 1.00 38.89 C HETATM 5823 C9 CLR A1203 127.678 123.956 120.636 1.00 38.89 C HETATM 5824 C10 CLR A1203 126.893 125.036 119.890 1.00 38.89 C HETATM 5825 C11 CLR A1203 129.187 124.153 120.522 1.00 38.89 C HETATM 5826 C12 CLR A1203 129.902 122.943 121.110 1.00 38.89 C HETATM 5827 C13 CLR A1203 129.544 122.728 122.578 1.00 38.89 C HETATM 5828 C14 CLR A1203 128.030 122.619 122.683 1.00 38.89 C HETATM 5829 C15 CLR A1203 127.775 122.274 124.134 1.00 38.89 C HETATM 5830 C16 CLR A1203 128.912 121.297 124.400 1.00 38.89 C HETATM 5831 C17 CLR A1203 129.922 121.400 123.244 1.00 38.89 C HETATM 5832 C18 CLR A1203 130.089 123.877 123.428 1.00 38.89 C HETATM 5833 C19 CLR A1203 127.381 126.428 120.270 1.00 38.89 C HETATM 5834 C20 CLR A1203 131.343 121.140 123.783 1.00 38.89 C HETATM 5835 C21 CLR A1203 132.487 121.120 122.768 1.00 38.89 C HETATM 5836 C22 CLR A1203 131.327 119.792 124.504 1.00 38.89 C HETATM 5837 C23 CLR A1203 132.690 119.308 124.984 1.00 38.89 C HETATM 5838 C24 CLR A1203 132.877 117.842 124.618 1.00 38.89 C HETATM 5839 C25 CLR A1203 134.248 117.328 125.016 1.00 38.89 C HETATM 5840 C26 CLR A1203 135.335 118.022 124.205 1.00 38.89 C HETATM 5841 C27 CLR A1203 134.476 117.493 126.513 1.00 38.89 C HETATM 5842 O1 CLR A1203 123.796 125.786 116.990 1.00 38.89 O HETATM 5843 N POV A1204 99.446 131.848 124.613 1.00 53.62 N HETATM 5844 P POV A1204 103.013 132.588 127.423 1.00 53.62 P HETATM 5845 C1 POV A1204 104.731 134.259 126.376 1.00 53.62 C HETATM 5846 C2 POV A1204 106.155 134.095 125.868 1.00 53.62 C HETATM 5847 C3 POV A1204 106.967 135.296 126.323 1.00 53.62 C HETATM 5848 C210 POV A1204 104.885 136.067 116.141 1.00 53.62 C HETATM 5849 C11 POV A1204 101.320 133.182 125.514 1.00 53.62 C HETATM 5850 O11 POV A1204 104.475 133.346 127.403 1.00 53.62 O HETATM 5851 C211 POV A1204 103.636 136.619 115.458 1.00 53.62 C HETATM 5852 C12 POV A1204 100.065 132.369 125.817 1.00 53.62 C HETATM 5853 O12 POV A1204 102.460 132.470 125.885 1.00 53.62 O HETATM 5854 C13 POV A1204 100.347 130.933 123.937 1.00 53.62 C HETATM 5855 O13 POV A1204 102.063 133.255 128.302 1.00 53.62 O HETATM 5856 C14 POV A1204 99.073 132.916 123.711 1.00 53.62 C HETATM 5857 O14 POV A1204 103.068 131.276 128.051 1.00 53.62 O HETATM 5858 C15 POV A1204 98.244 131.138 124.999 1.00 53.62 C HETATM 5859 C21 POV A1204 106.560 132.849 123.925 1.00 53.62 C HETATM 5860 O21 POV A1204 106.148 134.064 124.473 1.00 53.62 O HETATM 5861 C22 POV A1204 107.614 132.823 122.824 1.00 53.62 C HETATM 5862 O22 POV A1204 106.091 131.836 124.313 1.00 53.62 O HETATM 5863 C23 POV A1204 107.299 131.683 121.863 1.00 53.62 C HETATM 5864 C24 POV A1204 108.112 131.853 120.584 1.00 53.62 C HETATM 5865 C25 POV A1204 107.226 131.500 119.392 1.00 53.62 C HETATM 5866 C26 POV A1204 107.424 132.544 118.297 1.00 53.62 C HETATM 5867 C27 POV A1204 106.111 132.759 117.547 1.00 53.62 C HETATM 5868 C28 POV A1204 106.247 133.997 116.662 1.00 53.62 C HETATM 5869 C29 POV A1204 104.868 134.547 116.306 1.00 53.62 C HETATM 5870 C31 POV A1204 108.396 136.950 125.501 1.00 53.62 C HETATM 5871 O31 POV A1204 107.404 136.014 125.210 1.00 53.62 O HETATM 5872 C32 POV A1204 108.588 138.176 124.621 1.00 53.62 C HETATM 5873 O32 POV A1204 109.091 136.799 126.442 1.00 53.62 O HETATM 5874 C33 POV A1204 109.448 137.818 123.418 1.00 53.62 C HETATM 5875 C34 POV A1204 110.912 137.738 123.831 1.00 53.62 C HETATM 5876 C35 POV A1204 111.673 136.902 122.808 1.00 53.62 C HETATM 5877 C36 POV A1204 111.194 135.455 122.873 1.00 53.62 C HETATM 5878 C37 POV A1204 111.255 134.838 121.481 1.00 53.62 C HETATM 5879 C38 POV A1204 110.287 135.564 120.553 1.00 53.62 C CONECT 559 3413 CONECT 3413 559 CONECT 4249 5787 CONECT 4402 5759 CONECT 4686 5801 CONECT 5759 4402 5760 5770 CONECT 5760 5759 5761 5767 CONECT 5761 5760 5762 5768 CONECT 5762 5761 5763 5769 CONECT 5763 5762 5764 5770 CONECT 5764 5763 5771 CONECT 5765 5766 5767 5772 CONECT 5766 5765 CONECT 5767 5760 5765 CONECT 5768 5761 CONECT 5769 5762 5773 CONECT 5770 5759 5763 CONECT 5771 5764 CONECT 5772 5765 CONECT 5773 5769 5774 5784 CONECT 5774 5773 5775 5781 CONECT 5775 5774 5776 5782 CONECT 5776 5775 5777 5783 CONECT 5777 5776 5778 5784 CONECT 5778 5777 5785 CONECT 5779 5780 5781 5786 CONECT 5780 5779 CONECT 5781 5774 5779 CONECT 5782 5775 CONECT 5783 5776 CONECT 5784 5773 5777 CONECT 5785 5778 CONECT 5786 5779 CONECT 5787 4249 5788 5798 CONECT 5788 5787 5789 5795 CONECT 5789 5788 5790 5796 CONECT 5790 5789 5791 5797 CONECT 5791 5790 5792 5798 CONECT 5792 5791 5799 CONECT 5793 5794 5795 5800 CONECT 5794 5793 CONECT 5795 5788 5793 CONECT 5796 5789 CONECT 5797 5790 CONECT 5798 5787 5791 CONECT 5799 5792 CONECT 5800 5793 CONECT 5801 4686 5802 5812 CONECT 5802 5801 5803 5809 CONECT 5803 5802 5804 5810 CONECT 5804 5803 5805 5811 CONECT 5805 5804 5806 5812 CONECT 5806 5805 5813 CONECT 5807 5808 5809 5814 CONECT 5808 5807 CONECT 5809 5802 5807 CONECT 5810 5803 CONECT 5811 5804 CONECT 5812 5801 5805 CONECT 5813 5806 CONECT 5814 5807 CONECT 5815 5816 5824 CONECT 5816 5815 5817 CONECT 5817 5816 5818 5842 CONECT 5818 5817 5819 CONECT 5819 5818 5820 5824 CONECT 5820 5819 5821 CONECT 5821 5820 5822 CONECT 5822 5821 5823 5828 CONECT 5823 5822 5824 5825 CONECT 5824 5815 5819 5823 5833 CONECT 5825 5823 5826 CONECT 5826 5825 5827 CONECT 5827 5826 5828 5831 5832 CONECT 5828 5822 5827 5829 CONECT 5829 5828 5830 CONECT 5830 5829 5831 CONECT 5831 5827 5830 5834 CONECT 5832 5827 CONECT 5833 5824 CONECT 5834 5831 5835 5836 CONECT 5835 5834 CONECT 5836 5834 5837 CONECT 5837 5836 5838 CONECT 5838 5837 5839 CONECT 5839 5838 5840 5841 CONECT 5840 5839 CONECT 5841 5839 CONECT 5842 5817 CONECT 5843 5852 5854 5856 5858 CONECT 5844 5850 5853 5855 5857 CONECT 5845 5846 5850 CONECT 5846 5845 5847 5860 CONECT 5847 5846 5871 CONECT 5848 5851 5869 CONECT 5849 5852 5853 CONECT 5850 5844 5845 CONECT 5851 5848 CONECT 5852 5843 5849 CONECT 5853 5844 5849 CONECT 5854 5843 CONECT 5855 5844 CONECT 5856 5843 CONECT 5857 5844 CONECT 5858 5843 CONECT 5859 5860 5861 5862 CONECT 5860 5846 5859 CONECT 5861 5859 5863 CONECT 5862 5859 CONECT 5863 5861 5864 CONECT 5864 5863 5865 CONECT 5865 5864 5866 CONECT 5866 5865 5867 CONECT 5867 5866 5868 CONECT 5868 5867 5869 CONECT 5869 5848 5868 CONECT 5870 5871 5872 5873 CONECT 5871 5847 5870 CONECT 5872 5870 5874 CONECT 5873 5870 CONECT 5874 5872 5875 CONECT 5875 5874 5876 CONECT 5876 5875 5877 CONECT 5877 5876 5878 CONECT 5878 5877 5879 CONECT 5879 5878 MASTER 330 0 6 33 13 0 0 6 5877 2 126 68 END