HEADER ONCOPROTEIN 01-JUN-24 9C3L OBSLTE 25-MAR-26 9C3L 11QE TITLE CRYSTAL STRUCTURE OF GDP-BOUND KRAS G12D/I55E: SUPPRESSING G12D TITLE 2 ONCOGENICITY VIA SECOND-SITE I55E MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2B OF GTPASE KRAS; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KRAS, RAS, NUCLEOTIDE-BINDING PROTEIN, SIGNALING PROTEIN, G12D, I55E, KEYWDS 2 ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.H.TRAN,S.DHARMAIAH,D.K.SIMANSHU REVDAT 2 25-MAR-26 9C3L 1 OBSLTE REVDAT 1 08-OCT-25 9C3L 0 JRNL AUTH J.J.KWON,J.DILLY,S.LIU,E.KIM,Y.BIAN,S.DHARMAIAH,T.H.TRAN, JRNL AUTH 2 K.S.KAPNER,S.H.LY,X.YANG,D.RABARA,T.J.WAYBRIGHT, JRNL AUTH 3 A.O.GIACOMELLI,A.L.HONG,S.MISEK,B.WANG,A.RAVI,J.G.DOENCH, JRNL AUTH 4 R.BEROUKHIM,C.T.LEMKE,K.M.HAIGIS,D.ESPOSITO,D.E.ROOT, JRNL AUTH 5 D.V.NISSLEY,A.G.STEPHEN,F.MCCORMICK,D.K.SIMANSHU,W.C.HAHN, JRNL AUTH 6 A.J.AGUIRRE JRNL TITL COMPREHENSIVE STRUCTURE-FUNCTION ANALYSIS REVEALS GAIN- AND JRNL TITL 2 LOSS-OF-FUNCTION MECHANISMS IMPACTING ONCOGENIC KRAS JRNL TITL 3 ACTIVITY. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 39484452 JRNL DOI 10.1101/2024.10.22.618529 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.17.1_3660: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 110218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6800 - 3.4200 0.98 7831 143 0.1564 0.1809 REMARK 3 2 3.4200 - 2.7100 0.99 7818 139 0.1803 0.2078 REMARK 3 3 2.7100 - 2.3700 0.99 7798 154 0.1791 0.1733 REMARK 3 4 2.3700 - 2.1600 0.99 7726 130 0.1767 0.2082 REMARK 3 5 2.1600 - 2.0000 0.99 7739 151 0.1827 0.2089 REMARK 3 6 2.0000 - 1.8800 0.99 7783 143 0.1859 0.1921 REMARK 3 7 1.8800 - 1.7900 1.00 7740 145 0.1870 0.2015 REMARK 3 8 1.7900 - 1.7100 1.00 7813 140 0.1907 0.1861 REMARK 3 9 1.7100 - 1.6500 0.99 7775 147 0.1835 0.2216 REMARK 3 10 1.6500 - 1.5900 0.99 7739 139 0.1855 0.1950 REMARK 3 11 1.5900 - 1.5400 0.98 7665 138 0.1970 0.1986 REMARK 3 12 1.5400 - 1.4900 0.99 7732 135 0.1952 0.2513 REMARK 3 13 1.4900 - 1.4600 0.98 7608 140 0.2263 0.2606 REMARK 3 14 1.4600 - 1.4200 0.96 7473 134 0.2463 0.2901 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 4239 REMARK 3 ANGLE : 1.520 5776 REMARK 3 CHIRALITY : 0.106 645 REMARK 3 PLANARITY : 0.010 746 REMARK 3 DIHEDRAL : 29.692 624 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 28.4677 -0.0493 4.6526 REMARK 3 T TENSOR REMARK 3 T11: 0.1724 T22: 0.1269 REMARK 3 T33: 0.1585 T12: -0.0066 REMARK 3 T13: -0.0099 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.4746 L22: 0.1431 REMARK 3 L33: 0.3383 L12: -0.0511 REMARK 3 L13: -0.1952 L23: 0.0951 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: -0.0040 S13: 0.0002 REMARK 3 S21: -0.0104 S22: 0.0081 S23: -0.0063 REMARK 3 S31: 0.0054 S32: 0.0109 S33: -0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9C3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000254431. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110221 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 19.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.76100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5US4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M (NH4)2SO4; 0.2 K ACETATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 68.10700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.36550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 68.10700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.36550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLY B 0 REMARK 465 LYS B 169 REMARK 465 GLY C 0 REMARK 465 LYS C 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 ASP A 38 CG OD1 OD2 REMARK 470 SER A 39 OG REMARK 470 ARG A 41 CG CD NE CZ NH1 NH2 REMARK 470 THR A 58 OG1 CG2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 31 CG CD OE1 OE2 REMARK 470 ILE B 36 CG1 CG2 CD1 REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 ASP B 38 CG OD1 OD2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 LYS B 165 CE NZ REMARK 470 MET C 1 CG SD CE REMARK 470 GLU C 31 CG CD OE1 OE2 REMARK 470 ILE C 36 CG1 CG2 CD1 REMARK 470 GLU C 37 CG CD OE1 OE2 REMARK 470 ARG C 41 CG CD NE CZ NH1 NH2 REMARK 470 THR C 58 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -7.91 78.34 REMARK 500 LYS A 117 32.02 71.61 REMARK 500 ARG A 149 -2.12 77.35 REMARK 500 SER B 39 -10.59 78.04 REMARK 500 LYS B 117 33.03 71.61 REMARK 500 ARG B 149 -2.64 77.49 REMARK 500 SER C 39 -10.59 79.99 REMARK 500 LYS C 117 34.00 70.21 REMARK 500 ARG C 149 -2.97 77.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GLU A 55 OE2 86.9 REMARK 620 3 GDP A 201 O1B 93.6 90.8 REMARK 620 4 HOH A 343 O 86.7 173.6 90.5 REMARK 620 5 HOH A 344 O 176.4 92.2 89.9 94.1 REMARK 620 6 HOH A 386 O 88.3 90.2 177.9 88.6 88.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 327 O REMARK 620 2 HOH A 372 O 66.7 REMARK 620 3 HOH A 415 O 138.6 84.6 REMARK 620 4 HOH B 328 O 150.7 118.5 69.2 REMARK 620 5 HOH B 330 O 81.8 77.2 121.7 72.3 REMARK 620 6 HOH C 329 O 81.9 144.7 130.6 81.6 82.9 REMARK 620 7 HOH C 374 O 77.3 115.5 90.0 118.9 147.6 70.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 327 O REMARK 620 2 HOH A 372 O 84.2 REMARK 620 3 HOH A 415 O 168.6 85.5 REMARK 620 4 HOH B 330 O 84.3 74.9 97.7 REMARK 620 5 HOH C 329 O 85.7 145.3 105.6 71.1 REMARK 620 6 HOH C 374 O 97.2 146.9 88.7 138.2 67.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 GLU B 55 OE2 86.7 REMARK 620 3 GDP B 201 O1B 93.5 91.7 REMARK 620 4 HOH B 327 O 177.0 92.9 89.5 REMARK 620 5 HOH B 331 O 85.8 172.4 90.0 94.6 REMARK 620 6 HOH B 370 O 86.8 90.6 177.7 90.3 87.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 17 OG REMARK 620 2 GLU C 55 OE2 86.6 REMARK 620 3 GDP C 201 O1B 92.6 92.7 REMARK 620 4 HOH C 334 O 86.3 172.8 89.1 REMARK 620 5 HOH C 339 O 176.9 92.7 90.4 94.3 REMARK 620 6 HOH C 385 O 88.0 90.0 177.2 88.3 89.0 REMARK 620 N 1 2 3 4 5 DBREF 9C3L A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 9C3L B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 9C3L C 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 9C3L GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 9C3L ASP A 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 9C3L GLU A 55 UNP P01116 ILE 55 ENGINEERED MUTATION SEQADV 9C3L GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 9C3L ASP B 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 9C3L GLU B 55 UNP P01116 ILE 55 ENGINEERED MUTATION SEQADV 9C3L GLY C 0 UNP P01116 EXPRESSION TAG SEQADV 9C3L ASP C 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 9C3L GLU C 55 UNP P01116 ILE 55 ENGINEERED MUTATION SEQRES 1 A 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA ASP SEQRES 2 A 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 A 170 LEU LEU ASP GLU LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 170 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 A 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 A 170 LYS SEQRES 1 B 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA ASP SEQRES 2 B 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 B 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 B 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 B 170 LEU LEU ASP GLU LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 B 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 B 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 B 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 B 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 B 170 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 B 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 B 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 B 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 B 170 LYS SEQRES 1 C 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA ASP SEQRES 2 C 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 C 170 LEU LEU ASP GLU LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 170 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 C 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 C 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 C 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 C 170 LYS HET GDP A 201 28 HET MG A 202 1 HET GDP B 201 28 HET MG B 202 1 HET MG B 203 1 HET GDP C 201 28 HET MG C 202 1 HET MG C 203 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 4 GDP 3(C10 H15 N5 O11 P2) FORMUL 5 MG 5(MG 2+) FORMUL 12 HOH *360(H2 O) HELIX 1 AA1 GLY A 15 HIS A 27 1 13 HELIX 2 AA2 ALA A 59 SER A 65 5 7 HELIX 3 AA3 MET A 67 GLY A 75 1 9 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 ASP A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 LYS A 169 1 19 HELIX 8 AA8 GLY B 15 HIS B 27 1 13 HELIX 9 AA9 ALA B 59 SER B 65 5 7 HELIX 10 AB1 MET B 67 GLY B 75 1 9 HELIX 11 AB2 ASN B 86 ASP B 92 1 7 HELIX 12 AB3 ASP B 92 ASP B 105 1 14 HELIX 13 AB4 ASP B 126 GLY B 138 1 13 HELIX 14 AB5 GLY B 151 GLU B 168 1 18 HELIX 15 AB6 GLY C 15 HIS C 27 1 13 HELIX 16 AB7 ALA C 59 SER C 65 5 7 HELIX 17 AB8 MET C 67 GLY C 75 1 9 HELIX 18 AB9 ASN C 86 ASP C 92 1 7 HELIX 19 AC1 ASP C 92 ASP C 105 1 14 HELIX 20 AC2 ASP C 126 GLY C 138 1 13 HELIX 21 AC3 GLY C 151 GLU C 168 1 18 SHEET 1 AA1 7 PHE A 28 TYR A 32 0 SHEET 2 AA1 7 TYR A 40 ILE A 46 -1 O ARG A 41 N GLU A 31 SHEET 3 AA1 7 GLU A 49 GLU A 55 -1 O CYS A 51 N VAL A 44 SHEET 4 AA1 7 TYR A 4 VAL A 9 1 N TYR A 4 O LEU A 52 SHEET 5 AA1 7 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 9 SHEET 6 AA1 7 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 7 AA1 7 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 7 PHE B 28 TYR B 32 0 SHEET 2 AA2 7 TYR B 40 ILE B 46 -1 O ARG B 41 N GLU B 31 SHEET 3 AA2 7 GLU B 49 GLU B 55 -1 O CYS B 51 N VAL B 44 SHEET 4 AA2 7 TYR B 4 GLY B 10 1 N TYR B 4 O LEU B 52 SHEET 5 AA2 7 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 6 AA2 7 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 7 AA2 7 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 AA3 7 PHE C 28 TYR C 32 0 SHEET 2 AA3 7 TYR C 40 ILE C 46 -1 O GLN C 43 N VAL C 29 SHEET 3 AA3 7 GLU C 49 GLU C 55 -1 O CYS C 51 N VAL C 44 SHEET 4 AA3 7 TYR C 4 VAL C 9 1 N TYR C 4 O LEU C 52 SHEET 5 AA3 7 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 6 AA3 7 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 7 AA3 7 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 LINK OG SER A 17 MG MG A 202 1555 1555 2.08 LINK OE2 GLU A 55 MG MG A 202 1555 1555 2.13 LINK O1B GDP A 201 MG MG A 202 1555 1555 2.06 LINK MG MG A 202 O HOH A 343 1555 1555 2.07 LINK MG MG A 202 O HOH A 344 1555 1555 2.08 LINK MG MG A 202 O HOH A 386 1555 1555 2.10 LINK O HOH A 327 MG MG B 203 4545 1555 2.57 LINK O HOH A 327 MG MG C 203 1555 1555 1.98 LINK O HOH A 372 MG MG B 203 4545 1555 2.46 LINK O HOH A 372 MG MG C 203 1555 1555 2.13 LINK O HOH A 415 MG MG B 203 4545 1555 1.97 LINK O HOH A 415 MG MG C 203 1555 1555 2.29 LINK OG SER B 17 MG MG B 202 1555 1555 2.14 LINK OE2 GLU B 55 MG MG B 202 1555 1555 2.11 LINK O1B GDP B 201 MG MG B 202 1555 1555 2.04 LINK MG MG B 202 O HOH B 327 1555 1555 2.10 LINK MG MG B 202 O HOH B 331 1555 1555 2.11 LINK MG MG B 202 O HOH B 370 1555 1555 2.02 LINK MG MG B 203 O HOH B 328 1555 1555 2.38 LINK MG MG B 203 O HOH B 330 1555 1555 2.43 LINK MG MG B 203 O HOH C 329 1555 4545 2.53 LINK MG MG B 203 O HOH C 374 1555 4545 2.40 LINK O HOH B 330 MG MG C 203 4555 1555 2.80 LINK OG SER C 17 MG MG C 202 1555 1555 2.13 LINK OE2 GLU C 55 MG MG C 202 1555 1555 2.12 LINK O1B GDP C 201 MG MG C 202 1555 1555 2.07 LINK MG MG C 202 O HOH C 334 1555 1555 2.10 LINK MG MG C 202 O HOH C 339 1555 1555 2.06 LINK MG MG C 202 O HOH C 385 1555 1555 2.05 LINK MG MG C 203 O HOH C 329 1555 1555 2.84 LINK MG MG C 203 O HOH C 374 1555 1555 2.15 CRYST1 136.214 78.731 56.158 90.00 90.08 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007341 0.000000 0.000010 0.00000 SCALE2 0.000000 0.012701 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017807 0.00000 CONECT 113 4109 CONECT 425 4109 CONECT 1483 4138 CONECT 1788 4138 CONECT 2841 4168 CONECT 3148 4168 CONECT 4081 4082 4083 4084 4085 CONECT 4082 4081 4109 CONECT 4083 4081 CONECT 4084 4081 CONECT 4085 4081 4086 CONECT 4086 4085 4087 4088 4089 CONECT 4087 4086 CONECT 4088 4086 CONECT 4089 4086 4090 CONECT 4090 4089 4091 CONECT 4091 4090 4092 4093 CONECT 4092 4091 4097 CONECT 4093 4091 4094 4095 CONECT 4094 4093 CONECT 4095 4093 4096 4097 CONECT 4096 4095 CONECT 4097 4092 4095 4098 CONECT 4098 4097 4099 4108 CONECT 4099 4098 4100 CONECT 4100 4099 4101 CONECT 4101 4100 4102 4108 CONECT 4102 4101 4103 4104 CONECT 4103 4102 CONECT 4104 4102 4105 CONECT 4105 4104 4106 4107 CONECT 4106 4105 CONECT 4107 4105 4108 CONECT 4108 4098 4101 4107 CONECT 4109 113 425 4082 4212 CONECT 4109 4213 4255 CONECT 4110 4111 4112 4113 4114 CONECT 4111 4110 4138 CONECT 4112 4110 CONECT 4113 4110 CONECT 4114 4110 4115 CONECT 4115 4114 4116 4117 4118 CONECT 4116 4115 CONECT 4117 4115 CONECT 4118 4115 4119 CONECT 4119 4118 4120 CONECT 4120 4119 4121 4122 CONECT 4121 4120 4126 CONECT 4122 4120 4123 4124 CONECT 4123 4122 CONECT 4124 4122 4125 4126 CONECT 4125 4124 CONECT 4126 4121 4124 4127 CONECT 4127 4126 4128 4137 CONECT 4128 4127 4129 CONECT 4129 4128 4130 CONECT 4130 4129 4131 4137 CONECT 4131 4130 4132 4133 CONECT 4132 4131 CONECT 4133 4131 4134 CONECT 4134 4133 4135 4136 CONECT 4135 4134 CONECT 4136 4134 4137 CONECT 4137 4127 4130 4136 CONECT 4138 1483 1788 4111 4317 CONECT 4138 4321 4360 CONECT 4139 4318 4320 CONECT 4140 4141 4142 4143 4144 CONECT 4141 4140 4168 CONECT 4142 4140 CONECT 4143 4140 CONECT 4144 4140 4145 CONECT 4145 4144 4146 4147 4148 CONECT 4146 4145 CONECT 4147 4145 CONECT 4148 4145 4149 CONECT 4149 4148 4150 CONECT 4150 4149 4151 4152 CONECT 4151 4150 4156 CONECT 4152 4150 4153 4154 CONECT 4153 4152 CONECT 4154 4152 4155 4156 CONECT 4155 4154 CONECT 4156 4151 4154 4157 CONECT 4157 4156 4158 4167 CONECT 4158 4157 4159 CONECT 4159 4158 4160 CONECT 4160 4159 4161 4167 CONECT 4161 4160 4162 4163 CONECT 4162 4161 CONECT 4163 4161 4164 CONECT 4164 4163 4165 4166 CONECT 4165 4164 CONECT 4166 4164 4167 CONECT 4167 4157 4160 4166 CONECT 4168 2841 3148 4141 4444 CONECT 4168 4449 4495 CONECT 4169 4196 4241 4284 4439 CONECT 4169 4484 CONECT 4196 4169 CONECT 4212 4109 CONECT 4213 4109 CONECT 4241 4169 CONECT 4255 4109 CONECT 4284 4169 CONECT 4317 4138 CONECT 4318 4139 CONECT 4320 4139 CONECT 4321 4138 CONECT 4360 4138 CONECT 4439 4169 CONECT 4444 4168 CONECT 4449 4168 CONECT 4484 4169 CONECT 4495 4168 MASTER 356 0 8 21 21 0 0 6 4411 3 115 42 END