HEADER PROTEIN BINDING 05-JUN-24 9C4Z TITLE MENIN MUTANT - G331D COMPND MOL_ID: 1; COMPND 2 MOLECULE: MENIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MEN1, SCG2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.D.CLEGG,T.CIERPICKI,J.GREMBECKA REVDAT 2 24-DEC-25 9C4Z 1 JRNL REVDAT 1 14-MAY-25 9C4Z 0 JRNL AUTH J.RAY,B.CLEGG,J.GREMBECKA,T.CIERPICKI JRNL TITL DRUG-RESISTANT MENIN VARIANTS RETAIN HIGH BINDING AFFINITY JRNL TITL 2 AND INTERACTIONS WITH MLL1. JRNL REF J.BIOL.CHEM. V. 300 07777 2024 JRNL REFN ESSN 1083-351X JRNL PMID 39276940 JRNL DOI 10.1016/J.JBC.2024.107777 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 96385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.991 REMARK 3 FREE R VALUE TEST SET COUNT : 4811 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6597 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 319 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3646 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 506 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.77700 REMARK 3 B22 (A**2) : -0.28300 REMARK 3 B33 (A**2) : -0.49400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.057 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.051 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3907 ; 0.012 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3661 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5312 ; 1.993 ; 1.824 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8423 ; 0.687 ; 1.742 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 494 ; 5.719 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 24 ; 7.235 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 637 ;12.191 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 590 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4667 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 913 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 785 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 67 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1929 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 318 ; 0.127 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1940 ; 1.815 ; 1.645 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1940 ; 1.815 ; 1.645 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2446 ; 2.678 ; 2.951 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2447 ; 2.677 ; 2.953 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1967 ; 3.062 ; 1.912 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1968 ; 3.061 ; 1.913 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2866 ; 4.582 ; 3.367 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2867 ; 4.581 ; 3.368 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9C4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000282144. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 722 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 722 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96464 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.85200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.0 / 22.07.2010/ REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M HEPES, PH REMARK 280 7.5, 25% (W/V) PEG-3,350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.36450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.35500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.96850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.35500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.36450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.96850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 538 REMARK 465 ALA A 539 REMARK 465 PRO A 540 REMARK 465 ALA A 541 REMARK 465 ALA A 542 REMARK 465 SER A 543 REMARK 465 PRO A 544 REMARK 465 PRO A 545 REMARK 465 PRO A 546 REMARK 465 GLU A 547 REMARK 465 GLY A 548 REMARK 465 LYS A 589 REMARK 465 GLN A 590 REMARK 465 LYS A 591 REMARK 465 VAL A 592 REMARK 465 SER A 593 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 137 CZ NH1 NH2 REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 GLU A 204 CG CD OE1 OE2 REMARK 470 LEU A 249 CG CD1 CD2 REMARK 470 ARG A 332 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 355 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 460 CG1 CG2 REMARK 470 LYS A 569 CG CD CE NZ REMARK 470 GLN A 586 CG CD OE1 NE2 REMARK 470 MET A 587 CG SD CE REMARK 470 LYS A 588 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 433 H GLY A 435 1.28 REMARK 500 O TRP A 341 HG23 THR A 344 1.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 21 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 21 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 98 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 207 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 207 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 LEU A 565 CB - CG - CD2 ANGL. DEV. = 12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 77 -60.66 -161.25 REMARK 500 ASP A 180 11.68 -140.40 REMARK 500 ASN A 189 19.56 57.10 REMARK 500 SER A 226 47.82 -90.25 REMARK 500 ASN A 333 79.67 -104.59 REMARK 500 ASP A 370 -58.63 -138.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 21 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1205 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A1206 DISTANCE = 6.56 ANGSTROMS DBREF 9C4Z A 1 459 UNP O00255 MEN1_HUMAN 1 459 DBREF 9C4Z A 460 593 UNP O00255 MEN1_HUMAN 537 593 SEQADV 9C4Z GLY A -4 UNP O00255 EXPRESSION TAG SEQADV 9C4Z GLY A -3 UNP O00255 EXPRESSION TAG SEQADV 9C4Z SER A -2 UNP O00255 EXPRESSION TAG SEQADV 9C4Z SER A -1 UNP O00255 EXPRESSION TAG SEQADV 9C4Z SER A 0 UNP O00255 EXPRESSION TAG SEQADV 9C4Z A UNP O00255 ILE 54 DELETION SEQADV 9C4Z A UNP O00255 PRO 55 DELETION SEQADV 9C4Z A UNP O00255 THR 56 DELETION SEQADV 9C4Z A UNP O00255 ASN 57 DELETION SEQADV 9C4Z A UNP O00255 VAL 58 DELETION SEQADV 9C4Z A UNP O00255 PRO 59 DELETION SEQADV 9C4Z A UNP O00255 GLU 60 DELETION SEQADV 9C4Z A UNP O00255 LEU 61 DELETION SEQADV 9C4Z A UNP O00255 THR 62 DELETION SEQADV 9C4Z A UNP O00255 PHE 63 DELETION SEQADV 9C4Z A UNP O00255 GLN 64 DELETION SEQADV 9C4Z A UNP O00255 PRO 65 DELETION SEQADV 9C4Z A UNP O00255 SER 66 DELETION SEQADV 9C4Z A UNP O00255 PRO 67 DELETION SEQADV 9C4Z A UNP O00255 ALA 68 DELETION SEQADV 9C4Z A UNP O00255 PRO 69 DELETION SEQADV 9C4Z A UNP O00255 ASP 70 DELETION SEQADV 9C4Z A UNP O00255 PRO 71 DELETION SEQADV 9C4Z A UNP O00255 PRO 72 DELETION SEQADV 9C4Z A UNP O00255 GLY 73 DELETION SEQADV 9C4Z ASP A 326 UNP O00255 GLY 326 ENGINEERED MUTATION SEQADV 9C4Z A UNP O00255 GLU 387 DELETION SEQADV 9C4Z A UNP O00255 GLU 388 DELETION SEQADV 9C4Z A UNP O00255 ARG 389 DELETION SEQADV 9C4Z A UNP O00255 PRO 390 DELETION SEQADV 9C4Z A UNP O00255 GLY 391 DELETION SEQADV 9C4Z A UNP O00255 GLU 392 DELETION SEQADV 9C4Z A UNP O00255 GLN 393 DELETION SEQADV 9C4Z A UNP O00255 SER 394 DELETION SEQADV 9C4Z A UNP O00255 GLN 395 DELETION SEQADV 9C4Z A UNP O00255 GLY 396 DELETION SEQADV 9C4Z A UNP O00255 THR 397 DELETION SEQADV 9C4Z A UNP O00255 GLN 398 DELETION SEQADV 9C4Z ALA A 541 UNP O00255 THR 541 VARIANT SEQRES 1 A 489 GLY GLY SER SER SER MET GLY LEU LYS ALA ALA GLN LYS SEQRES 2 A 489 THR LEU PHE PRO LEU ARG SER ILE ASP ASP VAL VAL ARG SEQRES 3 A 489 LEU PHE ALA ALA GLU LEU GLY ARG GLU GLU PRO ASP LEU SEQRES 4 A 489 VAL LEU LEU SER LEU VAL LEU GLY PHE VAL GLU HIS PHE SEQRES 5 A 489 LEU ALA VAL ASN ARG VAL GLY LEU THR TYR PHE PRO VAL SEQRES 6 A 489 ALA ASP LEU SER ILE ILE ALA ALA LEU TYR ALA ARG PHE SEQRES 7 A 489 THR ALA GLN ILE ARG GLY ALA VAL ASP LEU SER LEU TYR SEQRES 8 A 489 PRO ARG GLU GLY GLY VAL SER SER ARG GLU LEU VAL LYS SEQRES 9 A 489 LYS VAL SER ASP VAL ILE TRP ASN SER LEU SER ARG SER SEQRES 10 A 489 TYR PHE LYS ASP ARG ALA HIS ILE GLN SER LEU PHE SER SEQRES 11 A 489 PHE ILE THR GLY THR LYS LEU ASP SER SER GLY VAL ALA SEQRES 12 A 489 PHE ALA VAL VAL GLY ALA CYS GLN ALA LEU GLY LEU ARG SEQRES 13 A 489 ASP VAL HIS LEU ALA LEU SER GLU ASP HIS ALA TRP VAL SEQRES 14 A 489 VAL PHE GLY PRO ASN GLY GLU GLN THR ALA GLU VAL THR SEQRES 15 A 489 TRP HIS GLY LYS GLY ASN GLU ASP ARG ARG GLY GLN THR SEQRES 16 A 489 VAL ASN ALA GLY VAL ALA GLU ARG SER TRP LEU TYR LEU SEQRES 17 A 489 LYS GLY SER TYR MET ARG CYS ASP ARG LYS MET GLU VAL SEQRES 18 A 489 ALA PHE MET VAL CYS ALA ILE ASN PRO SER ILE ASP LEU SEQRES 19 A 489 HIS THR ASP SER LEU GLU LEU LEU GLN LEU GLN GLN LYS SEQRES 20 A 489 LEU LEU TRP LEU LEU TYR ASP LEU GLY HIS LEU GLU ARG SEQRES 21 A 489 TYR PRO MET ALA LEU GLY ASN LEU ALA ASP LEU GLU GLU SEQRES 22 A 489 LEU GLU PRO THR PRO GLY ARG PRO ASP PRO LEU THR LEU SEQRES 23 A 489 TYR HIS LYS GLY ILE ALA SER ALA LYS THR TYR TYR ARG SEQRES 24 A 489 ASP GLU HIS ILE TYR PRO TYR MET TYR LEU ALA ASP TYR SEQRES 25 A 489 HIS CYS ARG ASN ARG ASN VAL ARG GLU ALA LEU GLN ALA SEQRES 26 A 489 TRP ALA ASP THR ALA THR VAL ILE GLN ASP TYR ASN TYR SEQRES 27 A 489 CYS ARG GLU ASP GLU GLU ILE TYR LYS GLU PHE PHE GLU SEQRES 28 A 489 VAL ALA ASN ASP VAL ILE PRO ASN LEU LEU LYS GLU ALA SEQRES 29 A 489 ALA SER LEU LEU GLU ALA GLY SER GLN GLY SER ALA LEU SEQRES 30 A 489 GLN ASP PRO GLU CYS PHE ALA HIS LEU LEU ARG PHE TYR SEQRES 31 A 489 ASP GLY ILE CYS LYS TRP GLU GLU GLY SER PRO THR PRO SEQRES 32 A 489 VAL LEU HIS VAL GLY TRP ALA THR PHE LEU VAL GLN SER SEQRES 33 A 489 LEU GLY ARG PHE GLU GLY GLN VAL ARG GLN LYS VAL ARG SEQRES 34 A 489 ILE VAL SER VAL PRO ALA PRO ALA ALA SER PRO PRO PRO SEQRES 35 A 489 GLU GLY PRO VAL LEU THR PHE GLN SER GLU LYS MET LYS SEQRES 36 A 489 GLY MET LYS GLU LEU LEU VAL ALA THR LYS ILE ASN SER SEQRES 37 A 489 SER ALA ILE LYS LEU GLN LEU THR ALA GLN SER GLN VAL SEQRES 38 A 489 GLN MET LYS LYS GLN LYS VAL SER HET PEG A 601 17 HET SO4 A 602 5 HET PG4 A 603 31 HET PG4 A 604 31 HET SO4 A 605 5 HET EDO A 606 10 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SO4 SULFATE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PEG C4 H10 O3 FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 PG4 2(C8 H18 O5) FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *506(H2 O) HELIX 1 AA1 LYS A 4 LYS A 8 5 5 HELIX 2 AA2 SER A 15 GLY A 28 1 14 HELIX 3 AA3 ASP A 33 VAL A 50 1 18 HELIX 4 AA4 ASP A 82 VAL A 101 1 20 HELIX 5 AA5 ASP A 102 TYR A 106 5 5 HELIX 6 AA6 SER A 114 LEU A 129 1 16 HELIX 7 AA7 SER A 142 THR A 150 1 9 HELIX 8 AA8 ASP A 153 LEU A 168 1 16 HELIX 9 AA9 GLY A 187 GLU A 191 5 5 HELIX 10 AB1 VAL A 211 GLU A 217 1 7 HELIX 11 AB2 SER A 219 SER A 226 5 8 HELIX 12 AB3 ASP A 231 ALA A 242 1 12 HELIX 13 AB4 SER A 253 LEU A 270 1 18 HELIX 14 AB5 TYR A 276 GLU A 290 1 15 HELIX 15 AB6 ASP A 297 TYR A 313 1 17 HELIX 16 AB7 ILE A 318 ASN A 331 1 14 HELIX 17 AB8 ASN A 333 GLN A 349 1 17 HELIX 18 AB9 ASP A 357 ASP A 370 1 14 HELIX 19 AC1 ASP A 370 ALA A 385 1 16 HELIX 20 AC2 SER A 402 GLN A 405 5 4 HELIX 21 AC3 ASP A 406 GLU A 425 1 20 HELIX 22 AC4 HIS A 433 ARG A 446 1 14 HELIX 23 AC5 GLU A 448 GLN A 453 1 6 HELIX 24 AC6 SER A 555 LYS A 562 1 8 HELIX 25 AC7 GLU A 563 ALA A 567 5 5 HELIX 26 AC8 ASN A 571 THR A 580 1 10 SHEET 1 AA1 4 GLN A 192 ALA A 194 0 SHEET 2 AA1 4 ALA A 182 PHE A 186 -1 N VAL A 184 O ALA A 194 SHEET 3 AA1 4 HIS A 174 LEU A 177 -1 N ALA A 176 O TRP A 183 SHEET 4 AA1 4 MET A 228 ARG A 229 -1 O MET A 228 N LEU A 177 SHEET 1 AA2 2 SER A 246 ASP A 248 0 SHEET 2 AA2 2 THR A 251 ASP A 252 -1 O THR A 251 N ILE A 247 SHEET 1 AA3 2 ARG A 456 ILE A 457 0 SHEET 2 AA3 2 VAL A 550 LEU A 551 1 O LEU A 551 N ARG A 456 CISPEP 1 PHE A 11 PRO A 12 0 -2.02 CRYST1 48.729 79.937 124.710 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020522 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012510 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008019 0.00000 CONECT 7517 7518 7519 7524 7525 CONECT 7518 7517 7526 CONECT 7519 7517 7520 7527 7528 CONECT 7520 7519 7521 CONECT 7521 7520 7522 7529 7530 CONECT 7522 7521 7523 7531 7532 CONECT 7523 7522 7533 CONECT 7524 7517 CONECT 7525 7517 CONECT 7526 7518 CONECT 7527 7519 CONECT 7528 7519 CONECT 7529 7521 CONECT 7530 7521 CONECT 7531 7522 CONECT 7532 7522 CONECT 7533 7523 CONECT 7534 7535 7536 7537 7538 CONECT 7535 7534 CONECT 7536 7534 CONECT 7537 7534 CONECT 7538 7534 CONECT 7539 7540 7552 CONECT 7540 7539 7541 7553 7554 CONECT 7541 7540 7542 7555 7556 CONECT 7542 7541 7543 CONECT 7543 7542 7544 7557 7558 CONECT 7544 7543 7545 7559 7560 CONECT 7545 7544 7546 CONECT 7546 7545 7547 7561 7562 CONECT 7547 7546 7548 7563 7564 CONECT 7548 7547 7549 CONECT 7549 7548 7550 7565 7566 CONECT 7550 7549 7551 7567 7568 CONECT 7551 7550 7569 CONECT 7552 7539 CONECT 7553 7540 CONECT 7554 7540 CONECT 7555 7541 CONECT 7556 7541 CONECT 7557 7543 CONECT 7558 7543 CONECT 7559 7544 CONECT 7560 7544 CONECT 7561 7546 CONECT 7562 7546 CONECT 7563 7547 CONECT 7564 7547 CONECT 7565 7549 CONECT 7566 7549 CONECT 7567 7550 CONECT 7568 7550 CONECT 7569 7551 CONECT 7570 7571 7583 CONECT 7571 7570 7572 7584 7585 CONECT 7572 7571 7573 7586 7587 CONECT 7573 7572 7574 CONECT 7574 7573 7575 7588 7589 CONECT 7575 7574 7576 7590 7591 CONECT 7576 7575 7577 CONECT 7577 7576 7578 7592 7593 CONECT 7578 7577 7579 7594 7595 CONECT 7579 7578 7580 CONECT 7580 7579 7581 7596 7597 CONECT 7581 7580 7582 7598 7599 CONECT 7582 7581 7600 CONECT 7583 7570 CONECT 7584 7571 CONECT 7585 7571 CONECT 7586 7572 CONECT 7587 7572 CONECT 7588 7574 CONECT 7589 7574 CONECT 7590 7575 CONECT 7591 7575 CONECT 7592 7577 CONECT 7593 7577 CONECT 7594 7578 CONECT 7595 7578 CONECT 7596 7580 CONECT 7597 7580 CONECT 7598 7581 CONECT 7599 7581 CONECT 7600 7582 CONECT 7601 7602 7603 7604 7605 CONECT 7602 7601 CONECT 7603 7601 CONECT 7604 7601 CONECT 7605 7601 CONECT 7606 7607 7608 7610 7611 CONECT 7607 7606 7612 CONECT 7608 7606 7609 7613 7614 CONECT 7609 7608 7615 CONECT 7610 7606 CONECT 7611 7606 CONECT 7612 7607 CONECT 7613 7608 CONECT 7614 7608 CONECT 7615 7609 MASTER 372 0 6 26 8 0 0 6 4199 1 99 38 END