HEADER VIRUS LIKE PARTICLE 12-JUN-24 9C8F TITLE CRYO-EM STRUCTURE OF EV-D68 B3 A-PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VP2; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VP3; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 3 ORGANISM_COMMON: EV68, EV-68; SOURCE 4 ORGANISM_TAXID: 42789; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 10 ORGANISM_COMMON: EV68, EV-68; SOURCE 11 ORGANISM_TAXID: 42789; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 17 ORGANISM_COMMON: EV68, EV-68; SOURCE 18 ORGANISM_TAXID: 42789; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS EV-D68, B3 SUBCLADE, VLP, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR J.CHENG,P.W.KRUG,H.LEI,D.L.MOSS,R.HUANG,Z.C.LANG,A.J.MORTON,C.SHEN, AUTHOR 2 T.C.PIERSON,T.ZHOU,T.J.RUCKWARDT,P.D.KWONG REVDAT 2 03-DEC-25 9C8F 1 JRNL REVDAT 1 21-MAY-25 9C8F 0 JRNL AUTH J.CHENG,P.W.KRUG,H.LEI,D.L.MOSS,Z.C.LANG,A.J.MORTON, JRNL AUTH 2 C.H.SHEN,S.PLETNEV,R.K.HUANG,T.C.PIERSON,T.ZHOU, JRNL AUTH 3 T.J.RUCKWARDT,P.D.KWONG JRNL TITL STRUCTURAL INSIGHTS FROM VACCINE CANDIDATES FOR EV-D68. JRNL REF COMMUN BIOL V. 8 860 2025 JRNL REFN ESSN 2399-3642 JRNL PMID 40467847 JRNL DOI 10.1038/S42003-025-08253-Y REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.860 REMARK 3 NUMBER OF PARTICLES : 37000 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9C8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000284498. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ENTEROVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : 4D-STEM REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5450.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809017 -0.500000 0.309017 102.52472 REMARK 350 BIOMT2 2 0.500000 0.309017 -0.809017 262.09080 REMARK 350 BIOMT3 2 0.309017 0.809017 0.500000 -165.88848 REMARK 350 BIOMT1 3 0.500000 -0.309017 0.809017 3.16120 REMARK 350 BIOMT2 3 0.309017 -0.809017 -0.500000 528.55027 REMARK 350 BIOMT3 3 0.809017 0.500000 -0.309017 -5.11493 REMARK 350 BIOMT1 4 0.500000 0.309017 0.809017 -160.77355 REMARK 350 BIOMT2 4 -0.309017 -0.809017 0.500000 431.14048 REMARK 350 BIOMT3 4 0.809017 -0.500000 -0.309017 260.13707 REMARK 350 BIOMT1 5 0.809017 0.500000 0.309017 -162.72728 REMARK 350 BIOMT2 5 -0.500000 0.309017 0.809017 104.47845 REMARK 350 BIOMT3 5 0.309017 -0.809017 0.500000 263.29827 REMARK 350 BIOMT1 6 -0.500000 -0.309017 0.809017 269.98020 REMARK 350 BIOMT2 6 -0.309017 -0.809017 -0.500000 693.45348 REMARK 350 BIOMT3 6 0.809017 -0.500000 0.309017 98.01872 REMARK 350 BIOMT1 7 -0.309017 0.809017 0.500000 3.52073 REMARK 350 BIOMT2 7 -0.809017 -0.500000 0.309017 532.67993 REMARK 350 BIOMT3 7 0.500000 -0.309017 0.809017 -1.34480 REMARK 350 BIOMT1 8 0.309017 0.809017 -0.500000 100.93052 REMARK 350 BIOMT2 8 -0.809017 0.500000 0.309017 267.42793 REMARK 350 BIOMT3 8 0.500000 0.309017 0.809017 -165.27955 REMARK 350 BIOMT1 9 0.500000 -0.309017 -0.809017 427.59255 REMARK 350 BIOMT2 9 -0.309017 0.809017 -0.500000 264.26673 REMARK 350 BIOMT3 9 0.809017 0.500000 0.309017 -167.23328 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 532.07100 REMARK 350 BIOMT2 10 0.000000 0.000000 -1.000000 527.56500 REMARK 350 BIOMT3 10 1.000000 0.000000 0.000000 -4.50600 REMARK 350 BIOMT1 11 0.309017 0.809017 -0.500000 100.93052 REMARK 350 BIOMT2 11 0.809017 -0.500000 -0.309017 263.07607 REMARK 350 BIOMT3 11 -0.500000 -0.309017 -0.809017 689.90555 REMARK 350 BIOMT1 12 0.500000 -0.309017 -0.809017 427.59255 REMARK 350 BIOMT2 12 0.309017 -0.809017 0.500000 266.23727 REMARK 350 BIOMT3 12 -0.809017 -0.500000 -0.309017 691.85928 REMARK 350 BIOMT1 13 0.000000 -1.000000 0.000000 532.07100 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 2.93900 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 529.13200 REMARK 350 BIOMT1 14 -0.500000 -0.309017 0.809017 269.98020 REMARK 350 BIOMT2 14 0.309017 0.809017 0.500000 -162.94948 REMARK 350 BIOMT3 14 -0.809017 0.500000 -0.309017 426.60728 REMARK 350 BIOMT1 15 -0.309017 0.809017 0.500000 3.52073 REMARK 350 BIOMT2 15 0.809017 0.500000 -0.309017 -2.17593 REMARK 350 BIOMT3 15 -0.500000 0.309017 -0.809017 525.97080 REMARK 350 BIOMT1 16 -0.809017 -0.500000 -0.309017 696.36528 REMARK 350 BIOMT2 16 -0.500000 0.309017 0.809017 104.47845 REMARK 350 BIOMT3 16 -0.309017 0.809017 -0.500000 261.32773 REMARK 350 BIOMT1 17 -1.000000 0.000000 0.000000 533.63800 REMARK 350 BIOMT2 17 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 0.000000 -1.000000 524.62600 REMARK 350 BIOMT1 18 -0.809017 0.500000 -0.309017 431.11328 REMARK 350 BIOMT2 18 0.500000 0.309017 -0.809017 262.09080 REMARK 350 BIOMT3 18 -0.309017 -0.809017 -0.500000 690.51448 REMARK 350 BIOMT1 19 -0.500000 0.309017 -0.809017 530.47680 REMARK 350 BIOMT2 19 0.309017 -0.809017 -0.500000 528.55027 REMARK 350 BIOMT3 19 -0.809017 -0.500000 0.309017 529.74093 REMARK 350 BIOMT1 20 -0.500000 -0.309017 -0.809017 694.41155 REMARK 350 BIOMT2 20 -0.309017 -0.809017 0.500000 431.14048 REMARK 350 BIOMT3 20 -0.809017 0.500000 0.309017 264.48893 REMARK 350 BIOMT1 21 0.809017 -0.500000 -0.309017 264.64307 REMARK 350 BIOMT2 21 -0.500000 -0.309017 -0.809017 692.84455 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 96.42452 REMARK 350 BIOMT1 22 0.309017 -0.809017 0.500000 267.80427 REMARK 350 BIOMT2 22 -0.809017 -0.500000 -0.309017 694.79828 REMARK 350 BIOMT3 22 0.500000 -0.309017 -0.809017 423.08655 REMARK 350 BIOMT1 23 0.000000 0.000000 1.000000 4.50600 REMARK 350 BIOMT2 23 -1.000000 0.000000 0.000000 532.07100 REMARK 350 BIOMT3 23 0.000000 -1.000000 0.000000 527.56500 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 -161.38248 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 429.54628 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 265.47420 REMARK 350 BIOMT1 25 0.809017 0.500000 -0.309017 -0.60893 REMARK 350 BIOMT2 25 -0.500000 0.309017 -0.809017 528.90980 REMARK 350 BIOMT3 25 -0.309017 0.809017 0.500000 -0.98527 REMARK 350 BIOMT1 26 -0.500000 0.309017 0.809017 106.04545 REMARK 350 BIOMT2 26 -0.309017 0.809017 -0.500000 264.26673 REMARK 350 BIOMT3 26 -0.809017 -0.500000 -0.309017 691.85928 REMARK 350 BIOMT1 27 0.000000 1.000000 0.000000 1.56700 REMARK 350 BIOMT2 27 0.000000 0.000000 -1.000000 527.56500 REMARK 350 BIOMT3 27 -1.000000 0.000000 0.000000 529.13200 REMARK 350 BIOMT1 28 0.500000 0.309017 -0.809017 263.65780 REMARK 350 BIOMT2 28 -0.309017 -0.809017 -0.500000 693.45348 REMARK 350 BIOMT3 28 -0.809017 0.500000 -0.309017 426.60728 REMARK 350 BIOMT1 29 0.309017 -0.809017 -0.500000 530.11727 REMARK 350 BIOMT2 29 -0.809017 -0.500000 0.309017 532.67993 REMARK 350 BIOMT3 29 -0.500000 0.309017 -0.809017 525.97080 REMARK 350 BIOMT1 30 -0.309017 -0.809017 0.500000 432.70748 REMARK 350 BIOMT2 30 -0.809017 0.500000 0.309017 267.42793 REMARK 350 BIOMT3 30 -0.500000 -0.309017 -0.809017 689.90555 REMARK 350 BIOMT1 31 0.000000 1.000000 0.000000 1.56700 REMARK 350 BIOMT2 31 0.000000 0.000000 1.000000 2.93900 REMARK 350 BIOMT3 31 1.000000 0.000000 0.000000 -4.50600 REMARK 350 BIOMT1 32 0.500000 0.309017 -0.809017 263.65780 REMARK 350 BIOMT2 32 0.309017 0.809017 0.500000 -162.94948 REMARK 350 BIOMT3 32 0.809017 -0.500000 0.309017 98.01872 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 530.11727 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 -2.17593 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 -1.34480 REMARK 350 BIOMT1 34 -0.309017 -0.809017 0.500000 432.70748 REMARK 350 BIOMT2 34 0.809017 -0.500000 -0.309017 263.07607 REMARK 350 BIOMT3 34 0.500000 0.309017 0.809017 -165.27955 REMARK 350 BIOMT1 35 -0.500000 0.309017 0.809017 106.04545 REMARK 350 BIOMT2 35 0.309017 -0.809017 0.500000 266.23727 REMARK 350 BIOMT3 35 0.809017 0.500000 0.309017 -167.23328 REMARK 350 BIOMT1 36 -0.309017 -0.809017 -0.500000 695.02048 REMARK 350 BIOMT2 36 0.809017 -0.500000 0.309017 100.95772 REMARK 350 BIOMT3 36 -0.500000 -0.309017 0.809017 265.47420 REMARK 350 BIOMT1 37 -0.809017 -0.500000 0.309017 534.24693 REMARK 350 BIOMT2 37 0.500000 -0.309017 0.809017 1.59420 REMARK 350 BIOMT3 37 -0.309017 0.809017 0.500000 -0.98527 REMARK 350 BIOMT1 38 -0.809017 0.500000 0.309017 268.99493 REMARK 350 BIOMT2 38 0.500000 0.309017 0.809017 -162.34055 REMARK 350 BIOMT3 38 0.309017 0.809017 -0.500000 96.42452 REMARK 350 BIOMT1 39 -0.309017 0.809017 -0.500000 265.83373 REMARK 350 BIOMT2 39 0.809017 0.500000 0.309017 -164.29428 REMARK 350 BIOMT3 39 0.500000 -0.309017 -0.809017 423.08655 REMARK 350 BIOMT1 40 0.000000 0.000000 -1.000000 529.13200 REMARK 350 BIOMT2 40 1.000000 0.000000 0.000000 -1.56700 REMARK 350 BIOMT3 40 0.000000 -1.000000 0.000000 527.56500 REMARK 350 BIOMT1 41 0.809017 -0.500000 0.309017 102.52472 REMARK 350 BIOMT2 41 -0.500000 -0.309017 0.809017 268.41320 REMARK 350 BIOMT3 41 -0.309017 -0.809017 -0.500000 690.51448 REMARK 350 BIOMT1 42 0.500000 -0.309017 0.809017 3.16120 REMARK 350 BIOMT2 42 -0.309017 0.809017 0.500000 1.95373 REMARK 350 BIOMT3 42 -0.809017 -0.500000 0.309017 529.74093 REMARK 350 BIOMT1 43 0.500000 0.309017 0.809017 -160.77355 REMARK 350 BIOMT2 43 0.309017 0.809017 -0.500000 99.36352 REMARK 350 BIOMT3 43 -0.809017 0.500000 0.309017 264.48893 REMARK 350 BIOMT1 44 0.809017 0.500000 0.309017 -162.72728 REMARK 350 BIOMT2 44 0.500000 -0.309017 -0.809017 426.02555 REMARK 350 BIOMT3 44 -0.309017 0.809017 -0.500000 261.32773 REMARK 350 BIOMT1 45 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 45 0.000000 -1.000000 0.000000 530.50400 REMARK 350 BIOMT3 45 0.000000 0.000000 -1.000000 524.62600 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 4.50600 REMARK 350 BIOMT2 46 1.000000 0.000000 0.000000 -1.56700 REMARK 350 BIOMT3 46 0.000000 1.000000 0.000000 -2.93900 REMARK 350 BIOMT1 47 0.309017 0.809017 0.500000 -161.38248 REMARK 350 BIOMT2 47 0.809017 -0.500000 0.309017 100.95772 REMARK 350 BIOMT3 47 0.500000 0.309017 -0.809017 259.15180 REMARK 350 BIOMT1 48 0.809017 0.500000 -0.309017 -0.60893 REMARK 350 BIOMT2 48 0.500000 -0.309017 0.809017 1.59420 REMARK 350 BIOMT3 48 0.309017 -0.809017 -0.500000 525.61127 REMARK 350 BIOMT1 49 0.809017 -0.500000 -0.309017 264.64307 REMARK 350 BIOMT2 49 0.500000 0.309017 0.809017 -162.34055 REMARK 350 BIOMT3 49 -0.309017 -0.809017 0.500000 428.20148 REMARK 350 BIOMT1 50 0.309017 -0.809017 0.500000 267.80427 REMARK 350 BIOMT2 50 0.809017 0.500000 0.309017 -164.29428 REMARK 350 BIOMT3 50 -0.500000 0.309017 0.809017 101.53945 REMARK 350 BIOMT1 51 -0.309017 0.809017 -0.500000 265.83373 REMARK 350 BIOMT2 51 -0.809017 -0.500000 -0.309017 694.79828 REMARK 350 BIOMT3 51 -0.500000 0.309017 0.809017 101.53945 REMARK 350 BIOMT1 52 0.000000 0.000000 -1.000000 529.13200 REMARK 350 BIOMT2 52 -1.000000 0.000000 0.000000 532.07100 REMARK 350 BIOMT3 52 0.000000 1.000000 0.000000 -2.93900 REMARK 350 BIOMT1 53 -0.309017 -0.809017 -0.500000 695.02048 REMARK 350 BIOMT2 53 -0.809017 0.500000 -0.309017 429.54628 REMARK 350 BIOMT3 53 0.500000 0.309017 -0.809017 259.15180 REMARK 350 BIOMT1 54 -0.809017 -0.500000 0.309017 534.24693 REMARK 350 BIOMT2 54 -0.500000 0.309017 -0.809017 528.90980 REMARK 350 BIOMT3 54 0.309017 -0.809017 -0.500000 525.61127 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 268.99493 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 692.84455 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 428.20148 REMARK 350 BIOMT1 56 -0.500000 -0.309017 -0.809017 694.41155 REMARK 350 BIOMT2 56 0.309017 0.809017 -0.500000 99.36352 REMARK 350 BIOMT3 56 0.809017 -0.500000 -0.309017 260.13707 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 696.36528 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 426.02555 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 263.29827 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 533.63800 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 530.50400 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.809017 0.500000 -0.309017 431.11328 REMARK 350 BIOMT2 59 -0.500000 -0.309017 0.809017 268.41320 REMARK 350 BIOMT3 59 0.309017 0.809017 0.500000 -165.88848 REMARK 350 BIOMT1 60 -0.500000 0.309017 -0.809017 530.47680 REMARK 350 BIOMT2 60 -0.309017 0.809017 0.500000 1.95373 REMARK 350 BIOMT3 60 0.809017 0.500000 -0.309017 -5.11493 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 THR A 9 REMARK 465 ASP A 10 REMARK 465 THR A 11 REMARK 465 VAL A 12 REMARK 465 LYS A 13 REMARK 465 SER A 14 REMARK 465 GLU A 15 REMARK 465 ILE A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 VAL A 22 REMARK 465 VAL A 23 REMARK 465 PRO A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 VAL A 29 REMARK 465 GLU A 30 REMARK 465 THR A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 THR A 34 REMARK 465 SER A 35 REMARK 465 ASN A 36 REMARK 465 THR A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 465 LYS A 270 REMARK 465 GLU A 271 REMARK 465 ARG A 272 REMARK 465 ALA A 273 REMARK 465 PRO A 274 REMARK 465 ASN A 275 REMARK 465 ALA A 276 REMARK 465 LEU A 277 REMARK 465 ASN A 278 REMARK 465 ALA A 279 REMARK 465 ILE A 280 REMARK 465 ILE A 281 REMARK 465 GLY A 282 REMARK 465 ASN A 283 REMARK 465 ARG A 284 REMARK 465 ASP A 285 REMARK 465 SER A 286 REMARK 465 VAL A 287 REMARK 465 LYS A 288 REMARK 465 THR A 289 REMARK 465 MET A 290 REMARK 465 PRO A 291 REMARK 465 HIS A 292 REMARK 465 ASN A 293 REMARK 465 ILE A 294 REMARK 465 VAL A 295 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 LEU B 14 REMARK 465 GLN B 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 208 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 PRO B 53 CA - N - CD ANGL. DEV. = -10.3 DEGREES REMARK 500 MET B 193 CB - CG - SD ANGL. DEV. = 18.3 DEGREES REMARK 500 ASP B 199 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 MET B 222 CB - CG - SD ANGL. DEV. = 26.6 DEGREES REMARK 500 LEU C 25 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 51 67.95 61.74 REMARK 500 HIS A 52 64.63 -103.79 REMARK 500 THR A 134 -60.81 -90.20 REMARK 500 LYS A 205 -174.39 60.59 REMARK 500 ASP A 215 -105.03 53.82 REMARK 500 THR A 216 60.13 35.84 REMARK 500 ALA A 250 75.82 53.97 REMARK 500 PRO B 43 -113.47 -85.26 REMARK 500 PRO B 56 59.58 -92.93 REMARK 500 LEU B 86 -7.83 71.45 REMARK 500 ASN B 88 -4.86 68.94 REMARK 500 ASP B 162 16.19 57.26 REMARK 500 SER B 223 70.79 58.01 REMARK 500 LEU C 25 76.61 53.20 REMARK 500 CYS C 27 29.37 45.34 REMARK 500 ASP C 76 -172.20 55.15 REMARK 500 LEU C 86 50.03 -94.49 REMARK 500 GLN C 89 53.93 -96.96 REMARK 500 LEU C 94 51.61 -92.04 REMARK 500 ASN C 96 35.20 -96.84 REMARK 500 LEU C 226 73.47 61.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-45303 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF EV-D68 B3 A-PARTICLE DBREF1 9C8F A 1 295 UNP A0A5B9NJ24_HED68 DBREF2 9C8F A A0A5B9NJ24 565 859 DBREF1 9C8F B 1 248 UNP A0A6B7FIF3_HED68 DBREF2 9C8F B A0A6B7FIF3 70 317 DBREF1 9C8F C 1 247 UNP A0A1L7H9D2_HED68 DBREF2 9C8F C A0A1L7H9D2 318 564 SEQRES 1 A 295 ILE GLU SER ILE ILE LYS THR ALA THR ASP THR VAL LYS SEQRES 2 A 295 SER GLU ILE ASN ALA GLU LEU GLY VAL VAL PRO SER LEU SEQRES 3 A 295 ASN ALA VAL GLU THR GLY ALA THR SER ASN THR GLU PRO SEQRES 4 A 295 GLU GLU ALA ILE GLN THR ARG THR VAL ILE ASN GLN HIS SEQRES 5 A 295 GLY VAL SER GLU THR LEU VAL GLU ASN PHE LEU SER ARG SEQRES 6 A 295 ALA ALA LEU VAL SER LYS ARG SER PHE GLU TYR LYS ASP SEQRES 7 A 295 HIS THR SER SER THR ALA GLN THR ASP LYS ASN PHE PHE SEQRES 8 A 295 LYS TRP THR ILE ASN THR ARG SER PHE VAL GLN LEU ARG SEQRES 9 A 295 ARG LYS LEU GLU LEU PHE THR TYR LEU ARG PHE ASP ALA SEQRES 10 A 295 GLU ILE THR ILE LEU THR THR VAL ALA VAL ASN GLY SER SEQRES 11 A 295 ASN ASN ASN THR TYR VAL GLY LEU PRO ASP LEU THR LEU SEQRES 12 A 295 GLN ALA MET PHE VAL PRO THR GLY ALA LEU THR PRO GLU SEQRES 13 A 295 LYS GLN ASP SER PHE HIS TRP GLN SER GLY SER ASN ALA SEQRES 14 A 295 SER VAL PHE PHE LYS ILE SER ASP PRO PRO ALA ARG MET SEQRES 15 A 295 THR ILE PRO PHE MET CYS ILE ASN SER ALA TYR SER VAL SEQRES 16 A 295 PHE TYR ASP GLY PHE ALA GLY PHE GLU LYS THR GLY LEU SEQRES 17 A 295 TYR GLY ILE ASN PRO ALA ASP THR ILE GLY ASN LEU CYS SEQRES 18 A 295 VAL ARG ILE VAL ASN GLU HIS GLN PRO VAL GLY PHE THR SEQRES 19 A 295 VAL THR VAL ARG VAL TYR MET LYS PRO LYS HIS ILE LYS SEQRES 20 A 295 ALA TRP ALA PRO ARG PRO PRO ARG THR LEU PRO TYR MET SEQRES 21 A 295 SER ILE ALA ASN ALA ASN TYR LYS GLY LYS GLU ARG ALA SEQRES 22 A 295 PRO ASN ALA LEU ASN ALA ILE ILE GLY ASN ARG ASP SER SEQRES 23 A 295 VAL LYS THR MET PRO HIS ASN ILE VAL SEQRES 1 B 248 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 248 LEU GLN LEU LYS LEU GLY ASN SER ALA ILE VAL THR GLN SEQRES 3 B 248 GLU ALA ALA ASN TYR CYS CYS ALA TYR GLY GLU TRP PRO SEQRES 4 B 248 ASN TYR LEU PRO ASP HIS GLU ALA VAL ALA ILE ASP LYS SEQRES 5 B 248 PRO THR GLN PRO GLU THR ALA THR ASP ARG PHE TYR THR SEQRES 6 B 248 LEU ARG SER VAL LYS TRP GLU ALA THR SER THR GLY TRP SEQRES 7 B 248 TRP TRP LYS LEU PRO ASP ALA LEU ASN ASN ILE GLY MET SEQRES 8 B 248 PHE GLY GLN ASN VAL GLN HIS HIS TYR LEU TYR ARG SER SEQRES 9 B 248 GLY PHE LEU ILE HIS VAL GLN CYS ASN ALA THR LYS PHE SEQRES 10 B 248 HIS GLN GLY ALA LEU LEU VAL VAL ALA ILE PRO GLU HIS SEQRES 11 B 248 GLN ARG GLY ALA HIS ASN THR THR THR SER PRO GLY PHE SEQRES 12 B 248 ASP ASP ILE MET LYS GLY GLU ALA GLY GLY THR PHE ASN SEQRES 13 B 248 HIS PRO TYR VAL LEU ASP ASP GLY THR SER LEU ALA CYS SEQRES 14 B 248 ALA THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG THR SEQRES 15 B 248 ASN ASN SER ALA THR ILE VAL LEU PRO TRP MET ASN ALA SEQRES 16 B 248 ALA PRO MET ASP PHE PRO LEU ARG HIS ASN GLN TRP THR SEQRES 17 B 248 LEU ALA ILE ILE PRO VAL VAL PRO LEU GLY THR ARG THR SEQRES 18 B 248 MET SER SER MET VAL PRO ILE THR VAL SER ILE ALA PRO SEQRES 19 B 248 MET CYS CYS GLU PHE ASN GLY LEU ARG HIS ALA ILE THR SEQRES 20 B 248 GLN SEQRES 1 C 247 GLY VAL PRO THR TYR LEU LEU PRO GLY SER GLY GLN PHE SEQRES 2 C 247 LEU THR THR ASP ASP HIS SER SER ALA PRO VAL LEU PRO SEQRES 3 C 247 CYS PHE ASN PRO THR PRO GLU MET HIS ILE PRO GLY GLN SEQRES 4 C 247 VAL ARG ASN MET LEU GLU VAL VAL GLN VAL GLU SER MET SEQRES 5 C 247 MET GLU ILE ASN ASN THR GLU SER ALA VAL GLY MET GLU SEQRES 6 C 247 ARG LEU LYS VAL ASP ILE SER ALA LEU THR ASP VAL ASP SEQRES 7 C 247 GLN LEU LEU PHE ASN ILE PRO LEU ASP ILE GLN LEU ASP SEQRES 8 C 247 GLY PRO LEU ARG ASN THR LEU VAL GLY ASN ILE SER ARG SEQRES 9 C 247 TYR TYR THR HIS TRP SER GLY SER LEU GLU MET THR PHE SEQRES 10 C 247 MET PHE CYS GLY SER PHE MET ALA THR GLY LYS LEU ILE SEQRES 11 C 247 LEU CYS TYR THR PRO PRO GLY GLY SER CYS PRO THR THR SEQRES 12 C 247 ARG GLU THR ALA MET LEU GLY THR HIS ILE VAL TRP ASP SEQRES 13 C 247 PHE GLY LEU GLN SER SER ILE THR LEU ILE ILE PRO TRP SEQRES 14 C 247 ILE SER GLY SER HIS TYR ARG MET PHE ASN ASN ASP ALA SEQRES 15 C 247 LYS SER THR ASN ALA ASN VAL GLY TYR VAL THR CYS PHE SEQRES 16 C 247 MET GLN THR ASN LEU ILE VAL PRO SER GLU SER SER ASP SEQRES 17 C 247 THR CYS SER LEU ILE GLY PHE ILE ALA ALA LYS ASP ASP SEQRES 18 C 247 PHE SER LEU ARG LEU MET ARG ASP SER PRO ASP ILE GLY SEQRES 19 C 247 GLN ILE ASP HIS LEU HIS GLY ALA GLU ALA ALA TYR GLN HELIX 1 AA1 VAL A 54 THR A 57 5 4 HELIX 2 AA2 LEU A 58 SER A 64 1 7 HELIX 3 AA3 PHE A 100 GLU A 108 1 9 HELIX 4 AA4 TYR B 35 GLU B 37 5 3 HELIX 5 AA5 PRO B 43 ALA B 47 5 5 HELIX 6 AA6 ILE B 89 HIS B 99 1 11 HELIX 7 AA7 GLY B 142 MET B 147 1 6 HELIX 8 AA8 SER B 166 PHE B 173 5 8 HELIX 9 AA9 MET C 43 GLN C 48 1 6 HELIX 10 AB1 GLY C 63 LEU C 67 5 5 HELIX 11 AB2 THR C 97 SER C 103 1 7 HELIX 12 AB3 THR C 143 GLY C 150 1 8 SHEET 1 AA1 4 ALA A 67 GLU A 75 0 SHEET 2 AA1 4 THR A 234 PRO A 251 -1 O VAL A 237 N ARG A 72 SHEET 3 AA1 4 PHE A 110 THR A 124 -1 N THR A 120 O TYR A 240 SHEET 4 AA1 4 TYR A 193 SER A 194 -1 O TYR A 193 N LEU A 113 SHEET 1 AA2 4 ALA A 180 THR A 183 0 SHEET 2 AA2 4 PHE A 110 THR A 124 -1 N ILE A 119 O MET A 182 SHEET 3 AA2 4 THR A 234 PRO A 251 -1 O TYR A 240 N THR A 120 SHEET 4 AA2 4 GLN C 39 VAL C 40 -1 O VAL C 40 N ALA A 248 SHEET 1 AA3 4 PHE A 90 THR A 94 0 SHEET 2 AA3 4 ASN A 219 ILE A 224 -1 O VAL A 222 N PHE A 91 SHEET 3 AA3 4 THR A 142 VAL A 148 -1 N VAL A 148 O ASN A 219 SHEET 4 AA3 4 SER A 170 LYS A 174 -1 O PHE A 173 N LEU A 143 SHEET 1 AA4 5 CYS B 32 CYS B 33 0 SHEET 2 AA4 5 SER B 185 LEU B 190 1 O THR B 187 N CYS B 32 SHEET 3 AA4 5 TYR B 102 CYS B 112 -1 N ILE B 108 O ILE B 188 SHEET 4 AA4 5 VAL B 226 PHE B 239 -1 O GLU B 238 N ARG B 103 SHEET 5 AA4 5 TYR B 64 TRP B 71 -1 N VAL B 69 O ILE B 228 SHEET 1 AA5 4 TRP B 78 LYS B 81 0 SHEET 2 AA5 4 THR B 208 ILE B 212 -1 O ILE B 211 N TRP B 78 SHEET 3 AA5 4 LEU B 123 ALA B 126 -1 N LEU B 123 O ILE B 212 SHEET 4 AA5 4 HIS B 175 TRP B 177 -1 O GLN B 176 N VAL B 124 SHEET 1 AA6 3 SER C 51 MET C 52 0 SHEET 2 AA6 3 CYS C 210 ALA C 218 -1 O ILE C 216 N SER C 51 SHEET 3 AA6 3 VAL C 69 ILE C 71 -1 N ILE C 71 O CYS C 210 SHEET 1 AA7 4 SER C 51 MET C 52 0 SHEET 2 AA7 4 CYS C 210 ALA C 218 -1 O ILE C 216 N SER C 51 SHEET 3 AA7 4 LEU C 113 CYS C 120 -1 N THR C 116 O PHE C 215 SHEET 4 AA7 4 SER C 162 ILE C 166 -1 O ILE C 163 N PHE C 117 SHEET 1 AA8 4 LEU C 80 PRO C 85 0 SHEET 2 AA8 4 TYR C 191 MET C 196 -1 O VAL C 192 N ILE C 84 SHEET 3 AA8 4 LYS C 128 THR C 134 -1 N CYS C 132 O THR C 193 SHEET 4 AA8 4 HIS C 152 ASP C 156 -1 O TRP C 155 N LEU C 129 SHEET 1 AA9 2 TYR C 106 HIS C 108 0 SHEET 2 AA9 2 ARG C 225 MET C 227 -1 O LEU C 226 N THR C 107 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 427 0 0 12 34 0 0 6 5541 3 0 62 END