HEADER ISOMERASE/DNA 16-JUN-24 9C9W TITLE DIMERIZED HUMAN TOP3B-TDRD3 CORE COMPLEX WITH A DNA MISMATCH BUBBLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE 3-BETA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA TOPOISOMERASE III BETA-1; COMPND 5 EC: 5.6.2.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TUDOR DOMAIN-CONTAINING PROTEIN 3; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: DUF-OB FOLD (UNP RESIDUES 1-161); COMPND 11 SYNONYM: TDRD3; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA TOPOISOMERASE 3-BETA-1; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: DNA TOPOISOMERASE III BETA-1; COMPND 17 EC: 5.6.2.1; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: DNA (5'- COMPND 21 D(P*CP*AP*GP*AP*TP*CP*AP*GP*AP*AP*TP*GP*AP*AP*TP*AP*TP*AP*CP*TP*AP*AP COMPND 22 *A)-3'); COMPND 23 CHAIN: E; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 5; COMPND 26 MOLECULE: DNA (5'- COMPND 27 D(*AP*TP*TP*GP*GP*AP*GP*TP*TP*CP*AP*TP*GP*TP*GP*AP*TP*GP*C)-3'); COMPND 28 CHAIN: F; COMPND 29 ENGINEERED: YES; COMPND 30 MOL_ID: 6; COMPND 31 MOLECULE: DNA (38-MER); COMPND 32 CHAIN: L; COMPND 33 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TOP3B, TOP3B1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: TDRD3; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: TOP3B, TOP3B1; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 25 MOL_ID: 4; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 28 ORGANISM_COMMON: HUMAN; SOURCE 29 ORGANISM_TAXID: 9606; SOURCE 30 MOL_ID: 5; SOURCE 31 SYNTHETIC: YES; SOURCE 32 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 33 ORGANISM_COMMON: HUMAN; SOURCE 34 ORGANISM_TAXID: 9606; SOURCE 35 MOL_ID: 6; SOURCE 36 SYNTHETIC: YES; SOURCE 37 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 38 ORGANISM_COMMON: HUMAN; SOURCE 39 ORGANISM_TAXID: 9606 KEYWDS TOPOISOMERASE, DNA, SUPERCOILING, ISOMERASE-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR X.YANG REVDAT 1 05-FEB-25 9C9W 0 JRNL AUTH X.YANG,X.CHEN,W.YANG,Y.POMMIER JRNL TITL STRUCTURAL INSIGHTS INTO HUMAN TOPOISOMERASE 3 BETA DNA AND JRNL TITL 2 RNA CATALYSIS AND NUCLEIC ACID GATE DYNAMICS. JRNL REF NAT COMMUN V. 16 834 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 39828754 JRNL DOI 10.1038/S41467-025-55959-Y REMARK 2 REMARK 2 RESOLUTION. 4.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.250 REMARK 3 NUMBER OF PARTICLES : 63358 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9C9W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000285045. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DIMERIZED HUMAN TOP3B-TDRD3 REMARK 245 CORE COMPLEXES WITH A DNA REMARK 245 MISMATCH BUBBLE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2400.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4600.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 N L 17 REMARK 465 N L 18 REMARK 465 N L 19 REMARK 465 N L 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA F 1 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3P PTR C 336 C5' DA F 1 1.85 REMARK 500 O PRO D 122 OG1 THR D 125 2.07 REMARK 500 O SER D 118 OG1 THR D 121 2.16 REMARK 500 O VAL A 309 O SER A 312 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER C 335 CA - C - N ANGL. DEV. = 18.9 DEGREES REMARK 500 SER C 335 O - C - N ANGL. DEV. = -28.5 DEGREES REMARK 500 PTR C 336 C - N - CA ANGL. DEV. = 15.6 DEGREES REMARK 500 DC L 31 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT L 34 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG L 42 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 10 132.56 -176.70 REMARK 500 LEU A 26 -154.43 55.50 REMARK 500 THR A 42 42.51 -103.51 REMARK 500 PHE A 45 -70.07 -63.19 REMARK 500 ALA A 46 50.11 -98.67 REMARK 500 MET A 62 -159.60 -150.22 REMARK 500 THR A 63 73.96 64.07 REMARK 500 ASP A 65 -118.87 58.58 REMARK 500 TYR A 70 -9.28 -55.46 REMARK 500 LYS A 72 -144.76 45.15 REMARK 500 ASP A 74 -37.20 -37.44 REMARK 500 LYS A 75 49.86 -82.52 REMARK 500 ASN A 93 53.15 30.16 REMARK 500 ASN A 97 -86.18 160.04 REMARK 500 MET A 98 -10.75 63.73 REMARK 500 ARG A 107 -73.77 65.27 REMARK 500 ASN A 173 -9.66 76.87 REMARK 500 TYR A 240 -162.83 -162.61 REMARK 500 LYS A 251 -2.42 81.38 REMARK 500 TRP A 259 70.60 57.83 REMARK 500 ASP A 260 -39.99 -35.71 REMARK 500 ARG A 263 140.93 70.88 REMARK 500 SER A 313 -114.03 54.11 REMARK 500 PRO A 337 55.15 -94.08 REMARK 500 GLU A 340 22.10 -140.33 REMARK 500 TYR A 344 75.12 51.64 REMARK 500 HIS A 360 76.27 54.81 REMARK 500 PRO A 361 -8.23 -51.78 REMARK 500 ALA A 364 -154.82 -147.87 REMARK 500 GLU A 373 -138.63 39.33 REMARK 500 ALA A 396 -169.62 -118.25 REMARK 500 LEU A 401 -60.74 -93.00 REMARK 500 PRO A 437 44.45 -78.87 REMARK 500 PHE A 476 72.35 44.74 REMARK 500 PRO A 477 -178.90 -66.81 REMARK 500 THR A 510 -168.99 -127.48 REMARK 500 ALA A 512 20.13 -140.88 REMARK 500 ILE A 551 -50.29 -124.32 REMARK 500 VAL A 556 -68.91 -91.14 REMARK 500 LEU A 557 66.86 28.20 REMARK 500 GLN A 573 -165.88 58.22 REMARK 500 ALA A 576 -163.09 -79.79 REMARK 500 ALA B 2 -115.22 35.30 REMARK 500 ASN B 34 -62.25 -93.95 REMARK 500 LEU B 41 -5.51 -58.74 REMARK 500 PRO B 54 -179.18 -63.72 REMARK 500 SER B 115 57.23 -97.91 REMARK 500 LYS B 136 -70.06 -81.70 REMARK 500 GLU B 159 48.95 37.59 REMARK 500 ASN C 33 -16.02 -143.68 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 491 ASP A 492 148.58 REMARK 500 SER C 335 PTR C 336 -145.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER C 335 25.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN E 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 9 OE2 REMARK 620 2 DA E 24 O3' 75.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-45374 RELATED DB: EMDB REMARK 900 DIMERIZED HUMAN TOP3B-TDRD3 CORE COMPLEX WITH A DNA MISMATCH BUBBLE DBREF 9C9W A 1 611 UNP O95985 TOP3B_HUMAN 1 611 DBREF 9C9W B 1 161 UNP Q9H7E2 TDRD3_HUMAN 1 161 DBREF 9C9W C 1 611 UNP O95985 TOP3B_HUMAN 1 611 DBREF 9C9W D 1 161 UNP Q9H7E2 TDRD3_HUMAN 1 161 DBREF 9C9W E 2 24 PDB 9C9W 9C9W 2 24 DBREF 9C9W F 1 19 PDB 9C9W 9C9W 1 19 DBREF 9C9W L 1 42 PDB 9C9W 9C9W 1 42 SEQADV 9C9W VAL A 0 UNP O95985 EXPRESSION TAG SEQADV 9C9W VAL C 0 UNP O95985 EXPRESSION TAG SEQRES 1 A 612 VAL MET LYS THR VAL LEU MET VAL ALA GLU LYS PRO SER SEQRES 2 A 612 LEU ALA GLN SER ILE ALA LYS ILE LEU SER ARG GLY SER SEQRES 3 A 612 LEU SER SER HIS LYS GLY LEU ASN GLY ALA CYS SER VAL SEQRES 4 A 612 HIS GLU TYR THR GLY THR PHE ALA GLY GLN PRO VAL ARG SEQRES 5 A 612 PHE LYS MET THR SER VAL CYS GLY HIS VAL MET THR LEU SEQRES 6 A 612 ASP PHE LEU GLY LYS TYR ASN LYS TRP ASP LYS VAL ASP SEQRES 7 A 612 PRO ALA GLU LEU PHE SER GLN ALA PRO THR GLU LYS LYS SEQRES 8 A 612 GLU ALA ASN PRO LYS LEU ASN MET VAL LYS PHE LEU GLN SEQRES 9 A 612 VAL GLU GLY ARG GLY CYS ASP TYR ILE VAL LEU TRP LEU SEQRES 10 A 612 ASP CYS ASP LYS GLU GLY GLU ASN ILE CYS PHE GLU VAL SEQRES 11 A 612 LEU ASP ALA VAL LEU PRO VAL MET ASN LYS ALA HIS GLY SEQRES 12 A 612 GLY GLU LYS THR VAL PHE ARG ALA ARG PHE SER SER ILE SEQRES 13 A 612 THR ASP THR ASP ILE CYS ASN ALA MET ALA CYS LEU GLY SEQRES 14 A 612 GLU PRO ASP HIS ASN GLU ALA LEU SER VAL ASP ALA ARG SEQRES 15 A 612 GLN GLU LEU ASP LEU ARG ILE GLY CYS ALA PHE THR ARG SEQRES 16 A 612 PHE GLN THR LYS TYR PHE GLN GLY LYS TYR GLY ASP LEU SEQRES 17 A 612 ASP SER SER LEU ILE SER PHE GLY PRO CYS GLN THR PRO SEQRES 18 A 612 THR LEU GLY PHE CYS VAL GLU ARG HIS ASP LYS ILE GLN SEQRES 19 A 612 SER PHE LYS PRO GLU THR TYR TRP VAL LEU GLN ALA LYS SEQRES 20 A 612 VAL ASN THR ASP LYS ASP ARG SER LEU LEU LEU ASP TRP SEQRES 21 A 612 ASP ARG VAL ARG VAL PHE ASP ARG GLU ILE ALA GLN MET SEQRES 22 A 612 PHE LEU ASN MET THR LYS LEU GLU LYS GLU ALA GLN VAL SEQRES 23 A 612 GLU ALA THR SER ARG LYS GLU LYS ALA LYS GLN ARG PRO SEQRES 24 A 612 LEU ALA LEU ASN THR VAL GLU MET LEU ARG VAL ALA SER SEQRES 25 A 612 SER SER LEU GLY MET GLY PRO GLN HIS ALA MET GLN THR SEQRES 26 A 612 ALA GLU ARG LEU TYR THR GLN GLY TYR ILE SER TYR PRO SEQRES 27 A 612 ARG THR GLU THR THR HIS TYR PRO GLU ASN PHE ASP LEU SEQRES 28 A 612 LYS GLY SER LEU ARG GLN GLN ALA ASN HIS PRO TYR TRP SEQRES 29 A 612 ALA ASP THR VAL LYS ARG LEU LEU ALA GLU GLY ILE ASN SEQRES 30 A 612 ARG PRO ARG LYS GLY HIS ASP ALA GLY ASP HIS PRO PRO SEQRES 31 A 612 ILE THR PRO MET LYS SER ALA THR GLU ALA GLU LEU GLY SEQRES 32 A 612 GLY ASP ALA TRP ARG LEU TYR GLU TYR ILE THR ARG HIS SEQRES 33 A 612 PHE ILE ALA THR VAL SER HIS ASP CYS LYS TYR LEU GLN SEQRES 34 A 612 SER THR ILE SER PHE ARG ILE GLY PRO GLU LEU PHE THR SEQRES 35 A 612 CYS SER GLY LYS THR VAL LEU SER PRO GLY PHE THR GLU SEQRES 36 A 612 VAL MET PRO TRP GLN SER VAL PRO LEU GLU GLU SER LEU SEQRES 37 A 612 PRO THR CYS GLN ARG GLY ASP ALA PHE PRO VAL GLY GLU SEQRES 38 A 612 VAL LYS MET LEU GLU LYS GLN THR ASN PRO PRO ASP TYR SEQRES 39 A 612 LEU THR GLU ALA GLU LEU ILE THR LEU MET GLU LYS HIS SEQRES 40 A 612 GLY ILE GLY THR ASP ALA SER ILE PRO VAL HIS ILE ASN SEQRES 41 A 612 ASN ILE CYS GLN ARG ASN TYR VAL THR VAL GLU SER GLY SEQRES 42 A 612 ARG ARG LEU LYS PRO THR ASN LEU GLY ILE VAL LEU VAL SEQRES 43 A 612 HIS GLY TYR TYR LYS ILE ASP ALA GLU LEU VAL LEU PRO SEQRES 44 A 612 THR ILE ARG SER ALA VAL GLU LYS GLN LEU ASN LEU ILE SEQRES 45 A 612 ALA GLN GLY LYS ALA ASP TYR ARG GLN VAL LEU GLY HIS SEQRES 46 A 612 THR LEU ASP VAL PHE LYS ARG LYS PHE HIS TYR PHE VAL SEQRES 47 A 612 ASP SER ILE ALA GLY MET ASP GLU LEU MET GLU VAL SER SEQRES 48 A 612 PHE SEQRES 1 B 161 MET ALA GLN VAL ALA GLY ALA ALA LEU SER GLN ALA GLY SEQRES 2 B 161 TRP TYR LEU SER ASP GLU GLY ILE GLU ALA CYS THR SER SEQRES 3 B 161 SER PRO ASP LYS VAL ASN VAL ASN ASP ILE ILE LEU ILE SEQRES 4 B 161 ALA LEU ASN THR ASP LEU ARG THR ILE GLY LYS LYS PHE SEQRES 5 B 161 LEU PRO SER ASP ILE ASN SER GLY LYS VAL GLU LYS LEU SEQRES 6 B 161 GLU GLY PRO CYS VAL LEU GLN ILE GLN LYS ILE ARG ASN SEQRES 7 B 161 VAL ALA ALA PRO LYS ASP ASN GLU GLU SER GLN ALA ALA SEQRES 8 B 161 PRO ARG MET LEU ARG LEU GLN MET THR ASP GLY HIS ILE SEQRES 9 B 161 SER CYS THR ALA VAL GLU PHE SER TYR MET SER LYS ILE SEQRES 10 B 161 SER LEU ASN THR PRO PRO GLY THR LYS VAL LYS LEU SER SEQRES 11 B 161 GLY ILE VAL ASP ILE LYS ASN GLY PHE LEU LEU LEU ASN SEQRES 12 B 161 ASP SER ASN THR THR VAL LEU GLY GLY GLU VAL GLU HIS SEQRES 13 B 161 LEU ILE GLU LYS TRP SEQRES 1 C 612 VAL MET LYS THR VAL LEU MET VAL ALA GLU LYS PRO SER SEQRES 2 C 612 LEU ALA GLN SER ILE ALA LYS ILE LEU SER ARG GLY SER SEQRES 3 C 612 LEU SER SER HIS LYS GLY LEU ASN GLY ALA CYS SER VAL SEQRES 4 C 612 HIS GLU TYR THR GLY THR PHE ALA GLY GLN PRO VAL ARG SEQRES 5 C 612 PHE LYS MET THR SER VAL CYS GLY HIS VAL MET THR LEU SEQRES 6 C 612 ASP PHE LEU GLY LYS TYR ASN LYS TRP ASP LYS VAL ASP SEQRES 7 C 612 PRO ALA GLU LEU PHE SER GLN ALA PRO THR GLU LYS LYS SEQRES 8 C 612 GLU ALA ASN PRO LYS LEU ASN MET VAL LYS PHE LEU GLN SEQRES 9 C 612 VAL GLU GLY ARG GLY CYS ASP TYR ILE VAL LEU TRP LEU SEQRES 10 C 612 ASP CYS ASP LYS GLU GLY GLU ASN ILE CYS PHE GLU VAL SEQRES 11 C 612 LEU ASP ALA VAL LEU PRO VAL MET ASN LYS ALA HIS GLY SEQRES 12 C 612 GLY GLU LYS THR VAL PHE ARG ALA ARG PHE SER SER ILE SEQRES 13 C 612 THR ASP THR ASP ILE CYS ASN ALA MET ALA CYS LEU GLY SEQRES 14 C 612 GLU PRO ASP HIS ASN GLU ALA LEU SER VAL ASP ALA ARG SEQRES 15 C 612 GLN GLU LEU ASP LEU ARG ILE GLY CYS ALA PHE THR ARG SEQRES 16 C 612 PHE GLN THR LYS TYR PHE GLN GLY LYS TYR GLY ASP LEU SEQRES 17 C 612 ASP SER SER LEU ILE SER PHE GLY PRO CYS GLN THR PRO SEQRES 18 C 612 THR LEU GLY PHE CYS VAL GLU ARG HIS ASP LYS ILE GLN SEQRES 19 C 612 SER PHE LYS PRO GLU THR TYR TRP VAL LEU GLN ALA LYS SEQRES 20 C 612 VAL ASN THR ASP LYS ASP ARG SER LEU LEU LEU ASP TRP SEQRES 21 C 612 ASP ARG VAL ARG VAL PHE ASP ARG GLU ILE ALA GLN MET SEQRES 22 C 612 PHE LEU ASN MET THR LYS LEU GLU LYS GLU ALA GLN VAL SEQRES 23 C 612 GLU ALA THR SER ARG LYS GLU LYS ALA LYS GLN ARG PRO SEQRES 24 C 612 LEU ALA LEU ASN THR VAL GLU MET LEU ARG VAL ALA SER SEQRES 25 C 612 SER SER LEU GLY MET GLY PRO GLN HIS ALA MET GLN THR SEQRES 26 C 612 ALA GLU ARG LEU TYR THR GLN GLY TYR ILE SER PTR PRO SEQRES 27 C 612 ARG THR GLU THR THR HIS TYR PRO GLU ASN PHE ASP LEU SEQRES 28 C 612 LYS GLY SER LEU ARG GLN GLN ALA ASN HIS PRO TYR TRP SEQRES 29 C 612 ALA ASP THR VAL LYS ARG LEU LEU ALA GLU GLY ILE ASN SEQRES 30 C 612 ARG PRO ARG LYS GLY HIS ASP ALA GLY ASP HIS PRO PRO SEQRES 31 C 612 ILE THR PRO MET LYS SER ALA THR GLU ALA GLU LEU GLY SEQRES 32 C 612 GLY ASP ALA TRP ARG LEU TYR GLU TYR ILE THR ARG HIS SEQRES 33 C 612 PHE ILE ALA THR VAL SER HIS ASP CYS LYS TYR LEU GLN SEQRES 34 C 612 SER THR ILE SER PHE ARG ILE GLY PRO GLU LEU PHE THR SEQRES 35 C 612 CYS SER GLY LYS THR VAL LEU SER PRO GLY PHE THR GLU SEQRES 36 C 612 VAL MET PRO TRP GLN SER VAL PRO LEU GLU GLU SER LEU SEQRES 37 C 612 PRO THR CYS GLN ARG GLY ASP ALA PHE PRO VAL GLY GLU SEQRES 38 C 612 VAL LYS MET LEU GLU LYS GLN THR ASN PRO PRO ASP TYR SEQRES 39 C 612 LEU THR GLU ALA GLU LEU ILE THR LEU MET GLU LYS HIS SEQRES 40 C 612 GLY ILE GLY THR ASP ALA SER ILE PRO VAL HIS ILE ASN SEQRES 41 C 612 ASN ILE CYS GLN ARG ASN TYR VAL THR VAL GLU SER GLY SEQRES 42 C 612 ARG ARG LEU LYS PRO THR ASN LEU GLY ILE VAL LEU VAL SEQRES 43 C 612 HIS GLY TYR TYR LYS ILE ASP ALA GLU LEU VAL LEU PRO SEQRES 44 C 612 THR ILE ARG SER ALA VAL GLU LYS GLN LEU ASN LEU ILE SEQRES 45 C 612 ALA GLN GLY LYS ALA ASP TYR ARG GLN VAL LEU GLY HIS SEQRES 46 C 612 THR LEU ASP VAL PHE LYS ARG LYS PHE HIS TYR PHE VAL SEQRES 47 C 612 ASP SER ILE ALA GLY MET ASP GLU LEU MET GLU VAL SER SEQRES 48 C 612 PHE SEQRES 1 D 161 MET ALA GLN VAL ALA GLY ALA ALA LEU SER GLN ALA GLY SEQRES 2 D 161 TRP TYR LEU SER ASP GLU GLY ILE GLU ALA CYS THR SER SEQRES 3 D 161 SER PRO ASP LYS VAL ASN VAL ASN ASP ILE ILE LEU ILE SEQRES 4 D 161 ALA LEU ASN THR ASP LEU ARG THR ILE GLY LYS LYS PHE SEQRES 5 D 161 LEU PRO SER ASP ILE ASN SER GLY LYS VAL GLU LYS LEU SEQRES 6 D 161 GLU GLY PRO CYS VAL LEU GLN ILE GLN LYS ILE ARG ASN SEQRES 7 D 161 VAL ALA ALA PRO LYS ASP ASN GLU GLU SER GLN ALA ALA SEQRES 8 D 161 PRO ARG MET LEU ARG LEU GLN MET THR ASP GLY HIS ILE SEQRES 9 D 161 SER CYS THR ALA VAL GLU PHE SER TYR MET SER LYS ILE SEQRES 10 D 161 SER LEU ASN THR PRO PRO GLY THR LYS VAL LYS LEU SER SEQRES 11 D 161 GLY ILE VAL ASP ILE LYS ASN GLY PHE LEU LEU LEU ASN SEQRES 12 D 161 ASP SER ASN THR THR VAL LEU GLY GLY GLU VAL GLU HIS SEQRES 13 D 161 LEU ILE GLU LYS TRP SEQRES 1 E 23 DC DA DG DA DT DC DA DG DA DA DT DG DA SEQRES 2 E 23 DA DT DA DT DA DC DT DA DA DA SEQRES 1 F 19 DA DT DT DG DG DA DG DT DT DC DA DT DG SEQRES 2 F 19 DT DG DA DT DG DC SEQRES 1 L 42 DG DC DA DT DC DA DC DA DT DG DA DA DC SEQRES 2 L 42 DT DC DC N N N N DG DT DG DT DT DC SEQRES 3 L 42 DA DA DT DT DC DA DT DT DC DT DG DA DT SEQRES 4 L 42 DC DT DG MODRES 9C9W PTR C 336 TYR MODIFIED RESIDUE HET PTR C 336 16 HET MN E 101 1 HETNAM PTR O-PHOSPHOTYROSINE HETNAM MN MANGANESE (II) ION HETSYN PTR PHOSPHONOTYROSINE FORMUL 3 PTR C9 H12 N O6 P FORMUL 8 MN MN 2+ HELIX 1 AA1 LYS A 10 ARG A 23 1 14 HELIX 2 AA2 GLY A 68 LYS A 72 5 5 HELIX 3 AA3 PRO A 78 SER A 83 1 6 HELIX 4 AA4 MET A 98 GLY A 106 1 9 HELIX 5 AA5 ASP A 119 LEU A 134 1 16 HELIX 6 AA6 PRO A 135 MET A 137 5 3 HELIX 7 AA7 THR A 156 CYS A 166 1 11 HELIX 8 AA8 ASN A 173 PHE A 200 1 28 HELIX 9 AA9 CYS A 217 PHE A 235 1 19 HELIX 10 AB1 GLU A 268 THR A 277 1 10 HELIX 11 AB2 ASN A 302 SER A 312 1 11 HELIX 12 AB3 GLY A 317 GLY A 332 1 16 HELIX 13 AB4 ASP A 349 GLN A 356 1 8 HELIX 14 AB5 ALA A 364 ALA A 372 1 9 HELIX 15 AB6 GLY A 402 THR A 419 1 18 HELIX 16 AB7 PRO A 450 VAL A 455 5 6 HELIX 17 AB8 THR A 495 GLY A 507 1 13 HELIX 18 AB9 SER A 513 ARG A 524 1 12 HELIX 19 AC1 THR A 538 ASP A 552 1 15 HELIX 20 AC2 THR A 559 LEU A 568 1 10 HELIX 21 AC3 ASP A 577 ASP A 598 1 22 HELIX 22 AC4 ILE A 600 PHE A 611 1 12 HELIX 23 AC5 ALA B 2 GLY B 13 1 12 HELIX 24 AC6 SER B 17 CYS B 24 1 8 HELIX 25 AC7 VAL B 33 LEU B 41 1 9 HELIX 26 AC8 ASP B 44 GLY B 49 1 6 HELIX 27 AC9 LYS C 10 ARG C 23 1 14 HELIX 28 AD1 GLY C 68 TRP C 73 5 6 HELIX 29 AD2 ASP C 77 PHE C 82 5 6 HELIX 30 AD3 ASN C 93 LEU C 96 5 4 HELIX 31 AD4 ASN C 97 GLU C 105 1 9 HELIX 32 AD5 GLY C 122 LEU C 134 1 13 HELIX 33 AD6 THR C 156 CYS C 166 1 11 HELIX 34 AD7 ASP C 171 TYR C 204 1 34 HELIX 35 AD8 GLY C 205 ASP C 208 5 4 HELIX 36 AD9 CYS C 217 SER C 234 1 18 HELIX 37 AE1 ASP C 266 LEU C 279 1 14 HELIX 38 AE2 ASN C 302 GLY C 315 1 14 HELIX 39 AE3 GLY C 317 GLY C 332 1 16 HELIX 40 AE4 ASP C 349 GLN C 357 1 9 HELIX 41 AE5 TRP C 363 GLY C 374 1 12 HELIX 42 AE6 THR C 397 LEU C 401 5 5 HELIX 43 AE7 GLY C 403 VAL C 420 1 18 HELIX 44 AE8 GLY C 451 VAL C 455 5 5 HELIX 45 AE9 MET C 456 SER C 460 5 5 HELIX 46 AF1 THR C 495 LYS C 505 1 11 HELIX 47 AF2 ALA C 512 ARG C 524 1 13 HELIX 48 AF3 THR C 538 ASP C 552 1 15 HELIX 49 AF4 ALA C 553 VAL C 556 5 4 HELIX 50 AF5 THR C 559 GLN C 573 1 15 HELIX 51 AF6 ASP C 577 SER C 599 1 23 HELIX 52 AF7 ILE C 600 PHE C 611 1 12 HELIX 53 AF8 ALA D 2 ALA D 12 1 11 HELIX 54 AF9 SER D 17 THR D 25 1 9 HELIX 55 AG1 ASN D 32 THR D 43 1 12 HELIX 56 AG2 ASP D 44 GLY D 49 1 6 SHEET 1 AA1 6 SER A 27 HIS A 29 0 SHEET 2 AA1 6 VAL A 38 TYR A 41 -1 O VAL A 38 N HIS A 29 SHEET 3 AA1 6 VAL A 50 SER A 56 -1 O MET A 54 N HIS A 39 SHEET 4 AA1 6 LYS A 2 ALA A 8 1 N VAL A 4 O LYS A 53 SHEET 5 AA1 6 TYR A 111 LEU A 114 1 O VAL A 113 N VAL A 7 SHEET 6 AA1 6 VAL A 147 ARG A 149 1 O PHE A 148 N LEU A 114 SHEET 1 AA2 2 VAL A 242 VAL A 247 0 SHEET 2 AA2 2 VAL A 478 LEU A 484 -1 O LYS A 482 N GLN A 244 SHEET 1 AA3 3 GLN A 284 LYS A 295 0 SHEET 2 AA3 3 CYS A 424 ILE A 435 -1 O THR A 430 N SER A 289 SHEET 3 AA3 3 GLU A 438 VAL A 447 -1 O CYS A 442 N ILE A 431 SHEET 1 AA4 2 LYS B 64 LEU B 65 0 SHEET 2 AA4 2 VAL B 133 ASP B 134 -1 O VAL B 133 N LEU B 65 SHEET 1 AA5 6 LEU B 140 LEU B 142 0 SHEET 2 AA5 6 CYS B 106 GLU B 110 1 N THR B 107 O LEU B 140 SHEET 3 AA5 6 LEU B 95 THR B 100 -1 N LEU B 97 O ALA B 108 SHEET 4 AA5 6 CYS B 69 ASN B 78 -1 N ARG B 77 O ARG B 96 SHEET 5 AA5 6 VAL B 127 LEU B 129 -1 O VAL B 127 N LEU B 71 SHEET 6 AA5 6 THR B 147 VAL B 149 -1 O THR B 148 N LYS B 128 SHEET 1 AA6 6 SER C 27 LYS C 30 0 SHEET 2 AA6 6 SER C 37 PHE C 45 -1 O VAL C 38 N HIS C 29 SHEET 3 AA6 6 GLN C 48 SER C 56 -1 O VAL C 50 N GLY C 43 SHEET 4 AA6 6 THR C 3 ALA C 8 1 N VAL C 4 O LYS C 53 SHEET 5 AA6 6 TYR C 111 TRP C 115 1 O TYR C 111 N LEU C 5 SHEET 6 AA6 6 VAL C 147 ARG C 149 1 O PHE C 148 N ILE C 112 SHEET 1 AA7 2 THR C 63 PHE C 66 0 SHEET 2 AA7 2 THR C 87 LYS C 90 -1 O LYS C 90 N THR C 63 SHEET 1 AA8 7 LEU C 255 LEU C 256 0 SHEET 2 AA8 7 THR C 239 VAL C 247 -1 N VAL C 247 O LEU C 255 SHEET 3 AA8 7 ALA C 475 GLN C 487 -1 O LEU C 484 N VAL C 242 SHEET 4 AA8 7 GLU C 282 THR C 288 -1 N ALA C 283 O PHE C 476 SHEET 5 AA8 7 LYS C 425 ARG C 434 -1 O SER C 432 N GLU C 286 SHEET 6 AA8 7 PHE C 440 SER C 449 -1 O PHE C 440 N PHE C 433 SHEET 7 AA8 7 ASP C 258 TRP C 259 -1 N ASP C 258 O THR C 441 SHEET 1 AA9 6 LEU C 255 LEU C 256 0 SHEET 2 AA9 6 THR C 239 VAL C 247 -1 N VAL C 247 O LEU C 255 SHEET 3 AA9 6 ALA C 475 GLN C 487 -1 O LEU C 484 N VAL C 242 SHEET 4 AA9 6 GLU C 282 THR C 288 -1 N ALA C 283 O PHE C 476 SHEET 5 AA9 6 LYS C 425 ARG C 434 -1 O SER C 432 N GLU C 286 SHEET 6 AA9 6 LYS C 291 ALA C 294 -1 N LYS C 293 O TYR C 426 SHEET 1 AB1 2 VAL C 527 VAL C 529 0 SHEET 2 AB1 2 LEU C 535 PRO C 537 -1 O LYS C 536 N THR C 528 SHEET 1 AB2 8 LYS D 64 LEU D 65 0 SHEET 2 AB2 8 VAL D 133 ILE D 135 -1 O VAL D 133 N LEU D 65 SHEET 3 AB2 8 LEU D 140 LEU D 141 -1 O LEU D 141 N ASP D 134 SHEET 4 AB2 8 SER D 105 VAL D 109 1 N VAL D 109 O LEU D 140 SHEET 5 AB2 8 ARG D 96 THR D 100 -1 N MET D 99 O CYS D 106 SHEET 6 AB2 8 VAL D 70 ARG D 77 -1 N GLN D 74 O GLN D 98 SHEET 7 AB2 8 THR D 125 LEU D 129 -1 O VAL D 127 N LEU D 71 SHEET 8 AB2 8 THR D 147 GLY D 151 -1 O THR D 148 N LYS D 128 LINK C SER C 335 N PTR C 336 1555 1555 1.43 LINK C PTR C 336 N PRO C 337 1555 1555 1.34 LINK OE2 GLU C 9 MN MN E 101 1555 1555 2.66 LINK O3' DA E 24 MN MN E 101 1555 1555 2.11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000