data_9CAG # _entry.id 9CAG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.401 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9CAG pdb_00009cag 10.2210/pdb9cag/pdb WWPDB D_1000285095 ? ? EMDB EMD-45390 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9CAG _pdbx_database_status.recvd_initial_deposition_date 2024-06-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Human TOP3B-TDRD3 core complex in RNA pre-cleavage state' _pdbx_database_related.db_id EMD-45390 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 Yves.Pommier@nih.gov Yves Pommier ? 'principal investigator/group leader' 0000-0002-3108-0758 3 weiy@niddk.nih.gov Wei Yang ? 'principal investigator/group leader' 0000-0002-3591-2195 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, X.' 1 ? 'Chen, X.' 2 ? 'Yang, W.' 3 ? 'Pommier, Y.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 834 _citation.page_last 834 _citation.title 'Structural insights into human topoisomerase 3 beta DNA and RNA catalysis and nucleic acid gate dynamics.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-55959-y _citation.pdbx_database_id_PubMed 39828754 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, X.' 1 0000-0003-0689-1417 primary 'Chen, X.' 2 0000-0002-1818-9206 primary 'Yang, W.' 3 0000-0002-3591-2195 primary 'Pommier, Y.' 4 0000-0002-3108-0758 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA topoisomerase 3-beta-1' 69021.875 1 5.6.2.1 ? ? ? 2 polymer man 'Tudor domain-containing protein 3' 17428.951 1 ? ? 'DUF-OB fold (UNP residues 1-161)' ? 3 polymer syn ;RNA (5'-R(P*AP*CP*UP*AP*AP*AP*AP*U)-3') ; 2518.585 1 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'DNA topoisomerase III beta-1' 2 TDRD3 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VMKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGHVMTLDFLGKYNKWDKVDPA ELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDKEGENICFEVLDAVLPVMNKAHGGEKTVFRARFSSITDTD ICNAMACLGEPDHNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPET YWVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLALNTVEMLRVASSSLGMGPQ HAMQTAERLYTQGYISFPRTETTHYPENFDLKGSLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATEA ELGGDAWRLYEYITRHFIATVSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEVMPWQSVPLEESLPTCQRGDAFPVG EVKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPT IRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSIAGMDELMEVSF ; ;VMKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGHVMTLDFLGKYNKWDKVDPA ELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDKEGENICFEVLDAVLPVMNKAHGGEKTVFRARFSSITDTD ICNAMACLGEPDHNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPET YWVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLALNTVEMLRVASSSLGMGPQ HAMQTAERLYTQGYISFPRTETTHYPENFDLKGSLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATEA ELGGDAWRLYEYITRHFIATVSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEVMPWQSVPLEESLPTCQRGDAFPVG EVKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPT IRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSIAGMDELMEVSF ; A ? 2 'polypeptide(L)' no no ;MAQVAGAALSQAGWYLSDEGIEACTSSPDKVNVNDIILIALNTDLRTIGKKFLPSDINSGKVEKLEGPCVLQIQKIRNVA APKDNEESQAAPRMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFLLLNDSNTTVLGGEVEHLIEK W ; ;MAQVAGAALSQAGWYLSDEGIEACTSSPDKVNVNDIILIALNTDLRTIGKKFLPSDINSGKVEKLEGPCVLQIQKIRNVA APKDNEESQAAPRMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFLLLNDSNTTVLGGEVEHLIEK W ; B ? 3 polyribonucleotide no no ACUAAAAU ACUAAAAU E ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'MANGANESE (II) ION' _pdbx_entity_nonpoly.comp_id MN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 MET n 1 3 LYS n 1 4 THR n 1 5 VAL n 1 6 LEU n 1 7 MET n 1 8 VAL n 1 9 ALA n 1 10 GLU n 1 11 LYS n 1 12 PRO n 1 13 SER n 1 14 LEU n 1 15 ALA n 1 16 GLN n 1 17 SER n 1 18 ILE n 1 19 ALA n 1 20 LYS n 1 21 ILE n 1 22 LEU n 1 23 SER n 1 24 ARG n 1 25 GLY n 1 26 SER n 1 27 LEU n 1 28 SER n 1 29 SER n 1 30 HIS n 1 31 LYS n 1 32 GLY n 1 33 LEU n 1 34 ASN n 1 35 GLY n 1 36 ALA n 1 37 CYS n 1 38 SER n 1 39 VAL n 1 40 HIS n 1 41 GLU n 1 42 TYR n 1 43 THR n 1 44 GLY n 1 45 THR n 1 46 PHE n 1 47 ALA n 1 48 GLY n 1 49 GLN n 1 50 PRO n 1 51 VAL n 1 52 ARG n 1 53 PHE n 1 54 LYS n 1 55 MET n 1 56 THR n 1 57 SER n 1 58 VAL n 1 59 CYS n 1 60 GLY n 1 61 HIS n 1 62 VAL n 1 63 MET n 1 64 THR n 1 65 LEU n 1 66 ASP n 1 67 PHE n 1 68 LEU n 1 69 GLY n 1 70 LYS n 1 71 TYR n 1 72 ASN n 1 73 LYS n 1 74 TRP n 1 75 ASP n 1 76 LYS n 1 77 VAL n 1 78 ASP n 1 79 PRO n 1 80 ALA n 1 81 GLU n 1 82 LEU n 1 83 PHE n 1 84 SER n 1 85 GLN n 1 86 ALA n 1 87 PRO n 1 88 THR n 1 89 GLU n 1 90 LYS n 1 91 LYS n 1 92 GLU n 1 93 ALA n 1 94 ASN n 1 95 PRO n 1 96 LYS n 1 97 LEU n 1 98 ASN n 1 99 MET n 1 100 VAL n 1 101 LYS n 1 102 PHE n 1 103 LEU n 1 104 GLN n 1 105 VAL n 1 106 GLU n 1 107 GLY n 1 108 ARG n 1 109 GLY n 1 110 CYS n 1 111 ASP n 1 112 TYR n 1 113 ILE n 1 114 VAL n 1 115 LEU n 1 116 TRP n 1 117 LEU n 1 118 ASP n 1 119 CYS n 1 120 ASP n 1 121 LYS n 1 122 GLU n 1 123 GLY n 1 124 GLU n 1 125 ASN n 1 126 ILE n 1 127 CYS n 1 128 PHE n 1 129 GLU n 1 130 VAL n 1 131 LEU n 1 132 ASP n 1 133 ALA n 1 134 VAL n 1 135 LEU n 1 136 PRO n 1 137 VAL n 1 138 MET n 1 139 ASN n 1 140 LYS n 1 141 ALA n 1 142 HIS n 1 143 GLY n 1 144 GLY n 1 145 GLU n 1 146 LYS n 1 147 THR n 1 148 VAL n 1 149 PHE n 1 150 ARG n 1 151 ALA n 1 152 ARG n 1 153 PHE n 1 154 SER n 1 155 SER n 1 156 ILE n 1 157 THR n 1 158 ASP n 1 159 THR n 1 160 ASP n 1 161 ILE n 1 162 CYS n 1 163 ASN n 1 164 ALA n 1 165 MET n 1 166 ALA n 1 167 CYS n 1 168 LEU n 1 169 GLY n 1 170 GLU n 1 171 PRO n 1 172 ASP n 1 173 HIS n 1 174 ASN n 1 175 GLU n 1 176 ALA n 1 177 LEU n 1 178 SER n 1 179 VAL n 1 180 ASP n 1 181 ALA n 1 182 ARG n 1 183 GLN n 1 184 GLU n 1 185 LEU n 1 186 ASP n 1 187 LEU n 1 188 ARG n 1 189 ILE n 1 190 GLY n 1 191 CYS n 1 192 ALA n 1 193 PHE n 1 194 THR n 1 195 ARG n 1 196 PHE n 1 197 GLN n 1 198 THR n 1 199 LYS n 1 200 TYR n 1 201 PHE n 1 202 GLN n 1 203 GLY n 1 204 LYS n 1 205 TYR n 1 206 GLY n 1 207 ASP n 1 208 LEU n 1 209 ASP n 1 210 SER n 1 211 SER n 1 212 LEU n 1 213 ILE n 1 214 SER n 1 215 PHE n 1 216 GLY n 1 217 PRO n 1 218 CYS n 1 219 GLN n 1 220 THR n 1 221 PRO n 1 222 THR n 1 223 LEU n 1 224 GLY n 1 225 PHE n 1 226 CYS n 1 227 VAL n 1 228 GLU n 1 229 ARG n 1 230 HIS n 1 231 ASP n 1 232 LYS n 1 233 ILE n 1 234 GLN n 1 235 SER n 1 236 PHE n 1 237 LYS n 1 238 PRO n 1 239 GLU n 1 240 THR n 1 241 TYR n 1 242 TRP n 1 243 VAL n 1 244 LEU n 1 245 GLN n 1 246 ALA n 1 247 LYS n 1 248 VAL n 1 249 ASN n 1 250 THR n 1 251 ASP n 1 252 LYS n 1 253 ASP n 1 254 ARG n 1 255 SER n 1 256 LEU n 1 257 LEU n 1 258 LEU n 1 259 ASP n 1 260 TRP n 1 261 ASP n 1 262 ARG n 1 263 VAL n 1 264 ARG n 1 265 VAL n 1 266 PHE n 1 267 ASP n 1 268 ARG n 1 269 GLU n 1 270 ILE n 1 271 ALA n 1 272 GLN n 1 273 MET n 1 274 PHE n 1 275 LEU n 1 276 ASN n 1 277 MET n 1 278 THR n 1 279 LYS n 1 280 LEU n 1 281 GLU n 1 282 LYS n 1 283 GLU n 1 284 ALA n 1 285 GLN n 1 286 VAL n 1 287 GLU n 1 288 ALA n 1 289 THR n 1 290 SER n 1 291 ARG n 1 292 LYS n 1 293 GLU n 1 294 LYS n 1 295 ALA n 1 296 LYS n 1 297 GLN n 1 298 ARG n 1 299 PRO n 1 300 LEU n 1 301 ALA n 1 302 LEU n 1 303 ASN n 1 304 THR n 1 305 VAL n 1 306 GLU n 1 307 MET n 1 308 LEU n 1 309 ARG n 1 310 VAL n 1 311 ALA n 1 312 SER n 1 313 SER n 1 314 SER n 1 315 LEU n 1 316 GLY n 1 317 MET n 1 318 GLY n 1 319 PRO n 1 320 GLN n 1 321 HIS n 1 322 ALA n 1 323 MET n 1 324 GLN n 1 325 THR n 1 326 ALA n 1 327 GLU n 1 328 ARG n 1 329 LEU n 1 330 TYR n 1 331 THR n 1 332 GLN n 1 333 GLY n 1 334 TYR n 1 335 ILE n 1 336 SER n 1 337 PHE n 1 338 PRO n 1 339 ARG n 1 340 THR n 1 341 GLU n 1 342 THR n 1 343 THR n 1 344 HIS n 1 345 TYR n 1 346 PRO n 1 347 GLU n 1 348 ASN n 1 349 PHE n 1 350 ASP n 1 351 LEU n 1 352 LYS n 1 353 GLY n 1 354 SER n 1 355 LEU n 1 356 ARG n 1 357 GLN n 1 358 GLN n 1 359 ALA n 1 360 ASN n 1 361 HIS n 1 362 PRO n 1 363 TYR n 1 364 TRP n 1 365 ALA n 1 366 ASP n 1 367 THR n 1 368 VAL n 1 369 LYS n 1 370 ARG n 1 371 LEU n 1 372 LEU n 1 373 ALA n 1 374 GLU n 1 375 GLY n 1 376 ILE n 1 377 ASN n 1 378 ARG n 1 379 PRO n 1 380 ARG n 1 381 LYS n 1 382 GLY n 1 383 HIS n 1 384 ASP n 1 385 ALA n 1 386 GLY n 1 387 ASP n 1 388 HIS n 1 389 PRO n 1 390 PRO n 1 391 ILE n 1 392 THR n 1 393 PRO n 1 394 MET n 1 395 LYS n 1 396 SER n 1 397 ALA n 1 398 THR n 1 399 GLU n 1 400 ALA n 1 401 GLU n 1 402 LEU n 1 403 GLY n 1 404 GLY n 1 405 ASP n 1 406 ALA n 1 407 TRP n 1 408 ARG n 1 409 LEU n 1 410 TYR n 1 411 GLU n 1 412 TYR n 1 413 ILE n 1 414 THR n 1 415 ARG n 1 416 HIS n 1 417 PHE n 1 418 ILE n 1 419 ALA n 1 420 THR n 1 421 VAL n 1 422 SER n 1 423 HIS n 1 424 ASP n 1 425 CYS n 1 426 LYS n 1 427 TYR n 1 428 LEU n 1 429 GLN n 1 430 SER n 1 431 THR n 1 432 ILE n 1 433 SER n 1 434 PHE n 1 435 ARG n 1 436 ILE n 1 437 GLY n 1 438 PRO n 1 439 GLU n 1 440 LEU n 1 441 PHE n 1 442 THR n 1 443 CYS n 1 444 SER n 1 445 GLY n 1 446 LYS n 1 447 THR n 1 448 VAL n 1 449 LEU n 1 450 SER n 1 451 PRO n 1 452 GLY n 1 453 PHE n 1 454 THR n 1 455 GLU n 1 456 VAL n 1 457 MET n 1 458 PRO n 1 459 TRP n 1 460 GLN n 1 461 SER n 1 462 VAL n 1 463 PRO n 1 464 LEU n 1 465 GLU n 1 466 GLU n 1 467 SER n 1 468 LEU n 1 469 PRO n 1 470 THR n 1 471 CYS n 1 472 GLN n 1 473 ARG n 1 474 GLY n 1 475 ASP n 1 476 ALA n 1 477 PHE n 1 478 PRO n 1 479 VAL n 1 480 GLY n 1 481 GLU n 1 482 VAL n 1 483 LYS n 1 484 MET n 1 485 LEU n 1 486 GLU n 1 487 LYS n 1 488 GLN n 1 489 THR n 1 490 ASN n 1 491 PRO n 1 492 PRO n 1 493 ASP n 1 494 TYR n 1 495 LEU n 1 496 THR n 1 497 GLU n 1 498 ALA n 1 499 GLU n 1 500 LEU n 1 501 ILE n 1 502 THR n 1 503 LEU n 1 504 MET n 1 505 GLU n 1 506 LYS n 1 507 HIS n 1 508 GLY n 1 509 ILE n 1 510 GLY n 1 511 THR n 1 512 ASP n 1 513 ALA n 1 514 SER n 1 515 ILE n 1 516 PRO n 1 517 VAL n 1 518 HIS n 1 519 ILE n 1 520 ASN n 1 521 ASN n 1 522 ILE n 1 523 CYS n 1 524 GLN n 1 525 ARG n 1 526 ASN n 1 527 TYR n 1 528 VAL n 1 529 THR n 1 530 VAL n 1 531 GLU n 1 532 SER n 1 533 GLY n 1 534 ARG n 1 535 ARG n 1 536 LEU n 1 537 LYS n 1 538 PRO n 1 539 THR n 1 540 ASN n 1 541 LEU n 1 542 GLY n 1 543 ILE n 1 544 VAL n 1 545 LEU n 1 546 VAL n 1 547 HIS n 1 548 GLY n 1 549 TYR n 1 550 TYR n 1 551 LYS n 1 552 ILE n 1 553 ASP n 1 554 ALA n 1 555 GLU n 1 556 LEU n 1 557 VAL n 1 558 LEU n 1 559 PRO n 1 560 THR n 1 561 ILE n 1 562 ARG n 1 563 SER n 1 564 ALA n 1 565 VAL n 1 566 GLU n 1 567 LYS n 1 568 GLN n 1 569 LEU n 1 570 ASN n 1 571 LEU n 1 572 ILE n 1 573 ALA n 1 574 GLN n 1 575 GLY n 1 576 LYS n 1 577 ALA n 1 578 ASP n 1 579 TYR n 1 580 ARG n 1 581 GLN n 1 582 VAL n 1 583 LEU n 1 584 GLY n 1 585 HIS n 1 586 THR n 1 587 LEU n 1 588 ASP n 1 589 VAL n 1 590 PHE n 1 591 LYS n 1 592 ARG n 1 593 LYS n 1 594 PHE n 1 595 HIS n 1 596 TYR n 1 597 PHE n 1 598 VAL n 1 599 ASP n 1 600 SER n 1 601 ILE n 1 602 ALA n 1 603 GLY n 1 604 MET n 1 605 ASP n 1 606 GLU n 1 607 LEU n 1 608 MET n 1 609 GLU n 1 610 VAL n 1 611 SER n 1 612 PHE n 2 1 MET n 2 2 ALA n 2 3 GLN n 2 4 VAL n 2 5 ALA n 2 6 GLY n 2 7 ALA n 2 8 ALA n 2 9 LEU n 2 10 SER n 2 11 GLN n 2 12 ALA n 2 13 GLY n 2 14 TRP n 2 15 TYR n 2 16 LEU n 2 17 SER n 2 18 ASP n 2 19 GLU n 2 20 GLY n 2 21 ILE n 2 22 GLU n 2 23 ALA n 2 24 CYS n 2 25 THR n 2 26 SER n 2 27 SER n 2 28 PRO n 2 29 ASP n 2 30 LYS n 2 31 VAL n 2 32 ASN n 2 33 VAL n 2 34 ASN n 2 35 ASP n 2 36 ILE n 2 37 ILE n 2 38 LEU n 2 39 ILE n 2 40 ALA n 2 41 LEU n 2 42 ASN n 2 43 THR n 2 44 ASP n 2 45 LEU n 2 46 ARG n 2 47 THR n 2 48 ILE n 2 49 GLY n 2 50 LYS n 2 51 LYS n 2 52 PHE n 2 53 LEU n 2 54 PRO n 2 55 SER n 2 56 ASP n 2 57 ILE n 2 58 ASN n 2 59 SER n 2 60 GLY n 2 61 LYS n 2 62 VAL n 2 63 GLU n 2 64 LYS n 2 65 LEU n 2 66 GLU n 2 67 GLY n 2 68 PRO n 2 69 CYS n 2 70 VAL n 2 71 LEU n 2 72 GLN n 2 73 ILE n 2 74 GLN n 2 75 LYS n 2 76 ILE n 2 77 ARG n 2 78 ASN n 2 79 VAL n 2 80 ALA n 2 81 ALA n 2 82 PRO n 2 83 LYS n 2 84 ASP n 2 85 ASN n 2 86 GLU n 2 87 GLU n 2 88 SER n 2 89 GLN n 2 90 ALA n 2 91 ALA n 2 92 PRO n 2 93 ARG n 2 94 MET n 2 95 LEU n 2 96 ARG n 2 97 LEU n 2 98 GLN n 2 99 MET n 2 100 THR n 2 101 ASP n 2 102 GLY n 2 103 HIS n 2 104 ILE n 2 105 SER n 2 106 CYS n 2 107 THR n 2 108 ALA n 2 109 VAL n 2 110 GLU n 2 111 PHE n 2 112 SER n 2 113 TYR n 2 114 MET n 2 115 SER n 2 116 LYS n 2 117 ILE n 2 118 SER n 2 119 LEU n 2 120 ASN n 2 121 THR n 2 122 PRO n 2 123 PRO n 2 124 GLY n 2 125 THR n 2 126 LYS n 2 127 VAL n 2 128 LYS n 2 129 LEU n 2 130 SER n 2 131 GLY n 2 132 ILE n 2 133 VAL n 2 134 ASP n 2 135 ILE n 2 136 LYS n 2 137 ASN n 2 138 GLY n 2 139 PHE n 2 140 LEU n 2 141 LEU n 2 142 LEU n 2 143 ASN n 2 144 ASP n 2 145 SER n 2 146 ASN n 2 147 THR n 2 148 THR n 2 149 VAL n 2 150 LEU n 2 151 GLY n 2 152 GLY n 2 153 GLU n 2 154 VAL n 2 155 GLU n 2 156 HIS n 2 157 LEU n 2 158 ILE n 2 159 GLU n 2 160 LYS n 2 161 TRP n 3 1 A n 3 2 C n 3 3 U n 3 4 A n 3 5 A n 3 6 A n 3 7 A n 3 8 U n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 612 human ? 'TOP3B, TOP3B1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 161 human ? TDRD3 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 0 0 VAL VAL A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 VAL 5 4 4 VAL VAL A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 MET 7 6 6 MET MET A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 SER 13 12 12 SER SER A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 ILE 18 17 17 ILE ILE A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 ARG 24 23 23 ARG ARG A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 HIS 30 29 29 HIS HIS A . n A 1 31 LYS 31 30 30 LYS LYS A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 ASN 34 33 33 ASN ASN A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 CYS 37 36 36 CYS CYS A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 HIS 40 39 39 HIS HIS A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 TYR 42 41 41 TYR TYR A . n A 1 43 THR 43 42 42 THR THR A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 GLN 49 48 48 GLN GLN A . n A 1 50 PRO 50 49 49 PRO PRO A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 ARG 52 51 51 ARG ARG A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 MET 55 54 54 MET MET A . n A 1 56 THR 56 55 55 THR THR A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 CYS 59 58 58 CYS CYS A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 MET 63 62 62 MET MET A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 ASP 66 65 65 ASP ASP A . n A 1 67 PHE 67 66 66 PHE PHE A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 LYS 70 69 69 LYS LYS A . n A 1 71 TYR 71 70 70 TYR TYR A . n A 1 72 ASN 72 71 71 ASN ASN A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 TRP 74 73 73 TRP TRP A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 VAL 77 76 76 VAL VAL A . n A 1 78 ASP 78 77 77 ASP ASP A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 GLN 85 84 84 GLN GLN A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 PRO 87 86 86 PRO PRO A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 PRO 95 94 94 PRO PRO A . n A 1 96 LYS 96 95 95 LYS LYS A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 MET 99 98 98 MET MET A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 GLN 104 103 103 GLN GLN A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 GLU 106 105 105 GLU GLU A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 ARG 108 107 107 ARG ARG A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 CYS 110 109 109 CYS CYS A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 TYR 112 111 111 TYR TYR A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 TRP 116 115 115 TRP TRP A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 ASP 118 117 117 ASP ASP A . n A 1 119 CYS 119 118 118 CYS CYS A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 LYS 121 120 120 LYS LYS A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 GLY 123 122 122 GLY GLY A . n A 1 124 GLU 124 123 123 GLU GLU A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 ILE 126 125 125 ILE ILE A . n A 1 127 CYS 127 126 126 CYS CYS A . n A 1 128 PHE 128 127 127 PHE PHE A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 VAL 130 129 129 VAL VAL A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 MET 138 137 137 MET MET A . n A 1 139 ASN 139 138 138 ASN ASN A . n A 1 140 LYS 140 139 139 LYS LYS A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 HIS 142 141 141 HIS HIS A . n A 1 143 GLY 143 142 142 GLY GLY A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 GLU 145 144 144 GLU GLU A . n A 1 146 LYS 146 145 145 LYS LYS A . n A 1 147 THR 147 146 146 THR THR A . n A 1 148 VAL 148 147 147 VAL VAL A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 ALA 151 150 150 ALA ALA A . n A 1 152 ARG 152 151 151 ARG ARG A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 SER 154 153 153 SER SER A . n A 1 155 SER 155 154 154 SER SER A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 ASP 158 157 157 ASP ASP A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 ASP 160 159 159 ASP ASP A . n A 1 161 ILE 161 160 160 ILE ILE A . n A 1 162 CYS 162 161 161 CYS CYS A . n A 1 163 ASN 163 162 162 ASN ASN A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 MET 165 164 164 MET MET A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 CYS 167 166 166 CYS CYS A . n A 1 168 LEU 168 167 167 LEU LEU A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 GLU 170 169 169 GLU GLU A . n A 1 171 PRO 171 170 170 PRO PRO A . n A 1 172 ASP 172 171 171 ASP ASP A . n A 1 173 HIS 173 172 172 HIS HIS A . n A 1 174 ASN 174 173 173 ASN ASN A . n A 1 175 GLU 175 174 174 GLU GLU A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 LEU 177 176 176 LEU LEU A . n A 1 178 SER 178 177 177 SER SER A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 ASP 180 179 179 ASP ASP A . n A 1 181 ALA 181 180 180 ALA ALA A . n A 1 182 ARG 182 181 181 ARG ARG A . n A 1 183 GLN 183 182 182 GLN GLN A . n A 1 184 GLU 184 183 183 GLU GLU A . n A 1 185 LEU 185 184 184 LEU LEU A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 ARG 188 187 187 ARG ARG A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 GLY 190 189 189 GLY GLY A . n A 1 191 CYS 191 190 190 CYS CYS A . n A 1 192 ALA 192 191 191 ALA ALA A . n A 1 193 PHE 193 192 192 PHE PHE A . n A 1 194 THR 194 193 193 THR THR A . n A 1 195 ARG 195 194 194 ARG ARG A . n A 1 196 PHE 196 195 195 PHE PHE A . n A 1 197 GLN 197 196 196 GLN GLN A . n A 1 198 THR 198 197 197 THR THR A . n A 1 199 LYS 199 198 198 LYS LYS A . n A 1 200 TYR 200 199 199 TYR TYR A . n A 1 201 PHE 201 200 200 PHE PHE A . n A 1 202 GLN 202 201 201 GLN GLN A . n A 1 203 GLY 203 202 202 GLY GLY A . n A 1 204 LYS 204 203 203 LYS LYS A . n A 1 205 TYR 205 204 204 TYR TYR A . n A 1 206 GLY 206 205 205 GLY GLY A . n A 1 207 ASP 207 206 206 ASP ASP A . n A 1 208 LEU 208 207 207 LEU LEU A . n A 1 209 ASP 209 208 208 ASP ASP A . n A 1 210 SER 210 209 209 SER SER A . n A 1 211 SER 211 210 210 SER SER A . n A 1 212 LEU 212 211 211 LEU LEU A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 SER 214 213 213 SER SER A . n A 1 215 PHE 215 214 214 PHE PHE A . n A 1 216 GLY 216 215 215 GLY GLY A . n A 1 217 PRO 217 216 216 PRO PRO A . n A 1 218 CYS 218 217 217 CYS CYS A . n A 1 219 GLN 219 218 218 GLN GLN A . n A 1 220 THR 220 219 219 THR THR A . n A 1 221 PRO 221 220 220 PRO PRO A . n A 1 222 THR 222 221 221 THR THR A . n A 1 223 LEU 223 222 222 LEU LEU A . n A 1 224 GLY 224 223 223 GLY GLY A . n A 1 225 PHE 225 224 224 PHE PHE A . n A 1 226 CYS 226 225 225 CYS CYS A . n A 1 227 VAL 227 226 226 VAL VAL A . n A 1 228 GLU 228 227 227 GLU GLU A . n A 1 229 ARG 229 228 228 ARG ARG A . n A 1 230 HIS 230 229 229 HIS HIS A . n A 1 231 ASP 231 230 230 ASP ASP A . n A 1 232 LYS 232 231 231 LYS LYS A . n A 1 233 ILE 233 232 232 ILE ILE A . n A 1 234 GLN 234 233 233 GLN GLN A . n A 1 235 SER 235 234 234 SER SER A . n A 1 236 PHE 236 235 235 PHE PHE A . n A 1 237 LYS 237 236 236 LYS LYS A . n A 1 238 PRO 238 237 237 PRO PRO A . n A 1 239 GLU 239 238 238 GLU GLU A . n A 1 240 THR 240 239 239 THR THR A . n A 1 241 TYR 241 240 240 TYR TYR A . n A 1 242 TRP 242 241 241 TRP TRP A . n A 1 243 VAL 243 242 242 VAL VAL A . n A 1 244 LEU 244 243 243 LEU LEU A . n A 1 245 GLN 245 244 244 GLN GLN A . n A 1 246 ALA 246 245 245 ALA ALA A . n A 1 247 LYS 247 246 246 LYS LYS A . n A 1 248 VAL 248 247 247 VAL VAL A . n A 1 249 ASN 249 248 248 ASN ASN A . n A 1 250 THR 250 249 249 THR THR A . n A 1 251 ASP 251 250 250 ASP ASP A . n A 1 252 LYS 252 251 251 LYS LYS A . n A 1 253 ASP 253 252 252 ASP ASP A . n A 1 254 ARG 254 253 253 ARG ARG A . n A 1 255 SER 255 254 254 SER SER A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 LEU 257 256 256 LEU LEU A . n A 1 258 LEU 258 257 257 LEU LEU A . n A 1 259 ASP 259 258 258 ASP ASP A . n A 1 260 TRP 260 259 259 TRP TRP A . n A 1 261 ASP 261 260 260 ASP ASP A . n A 1 262 ARG 262 261 261 ARG ARG A . n A 1 263 VAL 263 262 262 VAL VAL A . n A 1 264 ARG 264 263 263 ARG ARG A . n A 1 265 VAL 265 264 264 VAL VAL A . n A 1 266 PHE 266 265 265 PHE PHE A . n A 1 267 ASP 267 266 266 ASP ASP A . n A 1 268 ARG 268 267 267 ARG ARG A . n A 1 269 GLU 269 268 268 GLU GLU A . n A 1 270 ILE 270 269 269 ILE ILE A . n A 1 271 ALA 271 270 270 ALA ALA A . n A 1 272 GLN 272 271 271 GLN GLN A . n A 1 273 MET 273 272 272 MET MET A . n A 1 274 PHE 274 273 273 PHE PHE A . n A 1 275 LEU 275 274 274 LEU LEU A . n A 1 276 ASN 276 275 275 ASN ASN A . n A 1 277 MET 277 276 276 MET MET A . n A 1 278 THR 278 277 277 THR THR A . n A 1 279 LYS 279 278 278 LYS LYS A . n A 1 280 LEU 280 279 279 LEU LEU A . n A 1 281 GLU 281 280 280 GLU GLU A . n A 1 282 LYS 282 281 281 LYS LYS A . n A 1 283 GLU 283 282 282 GLU GLU A . n A 1 284 ALA 284 283 283 ALA ALA A . n A 1 285 GLN 285 284 284 GLN GLN A . n A 1 286 VAL 286 285 285 VAL VAL A . n A 1 287 GLU 287 286 286 GLU GLU A . n A 1 288 ALA 288 287 287 ALA ALA A . n A 1 289 THR 289 288 288 THR THR A . n A 1 290 SER 290 289 289 SER SER A . n A 1 291 ARG 291 290 290 ARG ARG A . n A 1 292 LYS 292 291 291 LYS LYS A . n A 1 293 GLU 293 292 292 GLU GLU A . n A 1 294 LYS 294 293 293 LYS LYS A . n A 1 295 ALA 295 294 294 ALA ALA A . n A 1 296 LYS 296 295 295 LYS LYS A . n A 1 297 GLN 297 296 296 GLN GLN A . n A 1 298 ARG 298 297 297 ARG ARG A . n A 1 299 PRO 299 298 298 PRO PRO A . n A 1 300 LEU 300 299 299 LEU LEU A . n A 1 301 ALA 301 300 300 ALA ALA A . n A 1 302 LEU 302 301 301 LEU LEU A . n A 1 303 ASN 303 302 302 ASN ASN A . n A 1 304 THR 304 303 303 THR THR A . n A 1 305 VAL 305 304 304 VAL VAL A . n A 1 306 GLU 306 305 305 GLU GLU A . n A 1 307 MET 307 306 306 MET MET A . n A 1 308 LEU 308 307 307 LEU LEU A . n A 1 309 ARG 309 308 308 ARG ARG A . n A 1 310 VAL 310 309 309 VAL VAL A . n A 1 311 ALA 311 310 310 ALA ALA A . n A 1 312 SER 312 311 311 SER SER A . n A 1 313 SER 313 312 312 SER SER A . n A 1 314 SER 314 313 313 SER SER A . n A 1 315 LEU 315 314 314 LEU LEU A . n A 1 316 GLY 316 315 315 GLY GLY A . n A 1 317 MET 317 316 316 MET MET A . n A 1 318 GLY 318 317 317 GLY GLY A . n A 1 319 PRO 319 318 318 PRO PRO A . n A 1 320 GLN 320 319 319 GLN GLN A . n A 1 321 HIS 321 320 320 HIS HIS A . n A 1 322 ALA 322 321 321 ALA ALA A . n A 1 323 MET 323 322 322 MET MET A . n A 1 324 GLN 324 323 323 GLN GLN A . n A 1 325 THR 325 324 324 THR THR A . n A 1 326 ALA 326 325 325 ALA ALA A . n A 1 327 GLU 327 326 326 GLU GLU A . n A 1 328 ARG 328 327 327 ARG ARG A . n A 1 329 LEU 329 328 328 LEU LEU A . n A 1 330 TYR 330 329 329 TYR TYR A . n A 1 331 THR 331 330 330 THR THR A . n A 1 332 GLN 332 331 331 GLN GLN A . n A 1 333 GLY 333 332 332 GLY GLY A . n A 1 334 TYR 334 333 333 TYR TYR A . n A 1 335 ILE 335 334 334 ILE ILE A . n A 1 336 SER 336 335 335 SER SER A . n A 1 337 PHE 337 336 336 PHE PHE A . n A 1 338 PRO 338 337 337 PRO PRO A . n A 1 339 ARG 339 338 338 ARG ARG A . n A 1 340 THR 340 339 339 THR THR A . n A 1 341 GLU 341 340 340 GLU GLU A . n A 1 342 THR 342 341 341 THR THR A . n A 1 343 THR 343 342 342 THR THR A . n A 1 344 HIS 344 343 343 HIS HIS A . n A 1 345 TYR 345 344 344 TYR TYR A . n A 1 346 PRO 346 345 345 PRO PRO A . n A 1 347 GLU 347 346 346 GLU GLU A . n A 1 348 ASN 348 347 347 ASN ASN A . n A 1 349 PHE 349 348 348 PHE PHE A . n A 1 350 ASP 350 349 349 ASP ASP A . n A 1 351 LEU 351 350 350 LEU LEU A . n A 1 352 LYS 352 351 351 LYS LYS A . n A 1 353 GLY 353 352 352 GLY GLY A . n A 1 354 SER 354 353 353 SER SER A . n A 1 355 LEU 355 354 354 LEU LEU A . n A 1 356 ARG 356 355 355 ARG ARG A . n A 1 357 GLN 357 356 356 GLN GLN A . n A 1 358 GLN 358 357 357 GLN GLN A . n A 1 359 ALA 359 358 358 ALA ALA A . n A 1 360 ASN 360 359 359 ASN ASN A . n A 1 361 HIS 361 360 360 HIS HIS A . n A 1 362 PRO 362 361 361 PRO PRO A . n A 1 363 TYR 363 362 362 TYR TYR A . n A 1 364 TRP 364 363 363 TRP TRP A . n A 1 365 ALA 365 364 364 ALA ALA A . n A 1 366 ASP 366 365 365 ASP ASP A . n A 1 367 THR 367 366 366 THR THR A . n A 1 368 VAL 368 367 367 VAL VAL A . n A 1 369 LYS 369 368 368 LYS LYS A . n A 1 370 ARG 370 369 369 ARG ARG A . n A 1 371 LEU 371 370 370 LEU LEU A . n A 1 372 LEU 372 371 371 LEU LEU A . n A 1 373 ALA 373 372 372 ALA ALA A . n A 1 374 GLU 374 373 373 GLU GLU A . n A 1 375 GLY 375 374 374 GLY GLY A . n A 1 376 ILE 376 375 375 ILE ILE A . n A 1 377 ASN 377 376 376 ASN ASN A . n A 1 378 ARG 378 377 377 ARG ARG A . n A 1 379 PRO 379 378 378 PRO PRO A . n A 1 380 ARG 380 379 379 ARG ARG A . n A 1 381 LYS 381 380 380 LYS LYS A . n A 1 382 GLY 382 381 381 GLY GLY A . n A 1 383 HIS 383 382 382 HIS HIS A . n A 1 384 ASP 384 383 383 ASP ASP A . n A 1 385 ALA 385 384 384 ALA ALA A . n A 1 386 GLY 386 385 385 GLY GLY A . n A 1 387 ASP 387 386 386 ASP ASP A . n A 1 388 HIS 388 387 387 HIS HIS A . n A 1 389 PRO 389 388 388 PRO PRO A . n A 1 390 PRO 390 389 389 PRO PRO A . n A 1 391 ILE 391 390 390 ILE ILE A . n A 1 392 THR 392 391 391 THR THR A . n A 1 393 PRO 393 392 392 PRO PRO A . n A 1 394 MET 394 393 393 MET MET A . n A 1 395 LYS 395 394 394 LYS LYS A . n A 1 396 SER 396 395 395 SER SER A . n A 1 397 ALA 397 396 396 ALA ALA A . n A 1 398 THR 398 397 397 THR THR A . n A 1 399 GLU 399 398 398 GLU GLU A . n A 1 400 ALA 400 399 399 ALA ALA A . n A 1 401 GLU 401 400 400 GLU GLU A . n A 1 402 LEU 402 401 401 LEU LEU A . n A 1 403 GLY 403 402 402 GLY GLY A . n A 1 404 GLY 404 403 403 GLY GLY A . n A 1 405 ASP 405 404 404 ASP ASP A . n A 1 406 ALA 406 405 405 ALA ALA A . n A 1 407 TRP 407 406 406 TRP TRP A . n A 1 408 ARG 408 407 407 ARG ARG A . n A 1 409 LEU 409 408 408 LEU LEU A . n A 1 410 TYR 410 409 409 TYR TYR A . n A 1 411 GLU 411 410 410 GLU GLU A . n A 1 412 TYR 412 411 411 TYR TYR A . n A 1 413 ILE 413 412 412 ILE ILE A . n A 1 414 THR 414 413 413 THR THR A . n A 1 415 ARG 415 414 414 ARG ARG A . n A 1 416 HIS 416 415 415 HIS HIS A . n A 1 417 PHE 417 416 416 PHE PHE A . n A 1 418 ILE 418 417 417 ILE ILE A . n A 1 419 ALA 419 418 418 ALA ALA A . n A 1 420 THR 420 419 419 THR THR A . n A 1 421 VAL 421 420 420 VAL VAL A . n A 1 422 SER 422 421 421 SER SER A . n A 1 423 HIS 423 422 422 HIS HIS A . n A 1 424 ASP 424 423 423 ASP ASP A . n A 1 425 CYS 425 424 424 CYS CYS A . n A 1 426 LYS 426 425 425 LYS LYS A . n A 1 427 TYR 427 426 426 TYR TYR A . n A 1 428 LEU 428 427 427 LEU LEU A . n A 1 429 GLN 429 428 428 GLN GLN A . n A 1 430 SER 430 429 429 SER SER A . n A 1 431 THR 431 430 430 THR THR A . n A 1 432 ILE 432 431 431 ILE ILE A . n A 1 433 SER 433 432 432 SER SER A . n A 1 434 PHE 434 433 433 PHE PHE A . n A 1 435 ARG 435 434 434 ARG ARG A . n A 1 436 ILE 436 435 435 ILE ILE A . n A 1 437 GLY 437 436 436 GLY GLY A . n A 1 438 PRO 438 437 437 PRO PRO A . n A 1 439 GLU 439 438 438 GLU GLU A . n A 1 440 LEU 440 439 439 LEU LEU A . n A 1 441 PHE 441 440 440 PHE PHE A . n A 1 442 THR 442 441 441 THR THR A . n A 1 443 CYS 443 442 442 CYS CYS A . n A 1 444 SER 444 443 443 SER SER A . n A 1 445 GLY 445 444 444 GLY GLY A . n A 1 446 LYS 446 445 445 LYS LYS A . n A 1 447 THR 447 446 446 THR THR A . n A 1 448 VAL 448 447 447 VAL VAL A . n A 1 449 LEU 449 448 448 LEU LEU A . n A 1 450 SER 450 449 449 SER SER A . n A 1 451 PRO 451 450 450 PRO PRO A . n A 1 452 GLY 452 451 451 GLY GLY A . n A 1 453 PHE 453 452 452 PHE PHE A . n A 1 454 THR 454 453 453 THR THR A . n A 1 455 GLU 455 454 454 GLU GLU A . n A 1 456 VAL 456 455 455 VAL VAL A . n A 1 457 MET 457 456 456 MET MET A . n A 1 458 PRO 458 457 457 PRO PRO A . n A 1 459 TRP 459 458 458 TRP TRP A . n A 1 460 GLN 460 459 459 GLN GLN A . n A 1 461 SER 461 460 460 SER SER A . n A 1 462 VAL 462 461 461 VAL VAL A . n A 1 463 PRO 463 462 462 PRO PRO A . n A 1 464 LEU 464 463 463 LEU LEU A . n A 1 465 GLU 465 464 464 GLU GLU A . n A 1 466 GLU 466 465 465 GLU GLU A . n A 1 467 SER 467 466 466 SER SER A . n A 1 468 LEU 468 467 467 LEU LEU A . n A 1 469 PRO 469 468 468 PRO PRO A . n A 1 470 THR 470 469 469 THR THR A . n A 1 471 CYS 471 470 470 CYS CYS A . n A 1 472 GLN 472 471 471 GLN GLN A . n A 1 473 ARG 473 472 472 ARG ARG A . n A 1 474 GLY 474 473 473 GLY GLY A . n A 1 475 ASP 475 474 474 ASP ASP A . n A 1 476 ALA 476 475 475 ALA ALA A . n A 1 477 PHE 477 476 476 PHE PHE A . n A 1 478 PRO 478 477 477 PRO PRO A . n A 1 479 VAL 479 478 478 VAL VAL A . n A 1 480 GLY 480 479 479 GLY GLY A . n A 1 481 GLU 481 480 480 GLU GLU A . n A 1 482 VAL 482 481 481 VAL VAL A . n A 1 483 LYS 483 482 482 LYS LYS A . n A 1 484 MET 484 483 483 MET MET A . n A 1 485 LEU 485 484 484 LEU LEU A . n A 1 486 GLU 486 485 485 GLU GLU A . n A 1 487 LYS 487 486 486 LYS LYS A . n A 1 488 GLN 488 487 487 GLN GLN A . n A 1 489 THR 489 488 488 THR THR A . n A 1 490 ASN 490 489 489 ASN ASN A . n A 1 491 PRO 491 490 490 PRO PRO A . n A 1 492 PRO 492 491 491 PRO PRO A . n A 1 493 ASP 493 492 492 ASP ASP A . n A 1 494 TYR 494 493 493 TYR TYR A . n A 1 495 LEU 495 494 494 LEU LEU A . n A 1 496 THR 496 495 495 THR THR A . n A 1 497 GLU 497 496 496 GLU GLU A . n A 1 498 ALA 498 497 497 ALA ALA A . n A 1 499 GLU 499 498 498 GLU GLU A . n A 1 500 LEU 500 499 499 LEU LEU A . n A 1 501 ILE 501 500 500 ILE ILE A . n A 1 502 THR 502 501 501 THR THR A . n A 1 503 LEU 503 502 502 LEU LEU A . n A 1 504 MET 504 503 503 MET MET A . n A 1 505 GLU 505 504 504 GLU GLU A . n A 1 506 LYS 506 505 505 LYS LYS A . n A 1 507 HIS 507 506 506 HIS HIS A . n A 1 508 GLY 508 507 507 GLY GLY A . n A 1 509 ILE 509 508 508 ILE ILE A . n A 1 510 GLY 510 509 509 GLY GLY A . n A 1 511 THR 511 510 510 THR THR A . n A 1 512 ASP 512 511 511 ASP ASP A . n A 1 513 ALA 513 512 512 ALA ALA A . n A 1 514 SER 514 513 513 SER SER A . n A 1 515 ILE 515 514 514 ILE ILE A . n A 1 516 PRO 516 515 515 PRO PRO A . n A 1 517 VAL 517 516 516 VAL VAL A . n A 1 518 HIS 518 517 517 HIS HIS A . n A 1 519 ILE 519 518 518 ILE ILE A . n A 1 520 ASN 520 519 519 ASN ASN A . n A 1 521 ASN 521 520 520 ASN ASN A . n A 1 522 ILE 522 521 521 ILE ILE A . n A 1 523 CYS 523 522 522 CYS CYS A . n A 1 524 GLN 524 523 523 GLN GLN A . n A 1 525 ARG 525 524 524 ARG ARG A . n A 1 526 ASN 526 525 525 ASN ASN A . n A 1 527 TYR 527 526 526 TYR TYR A . n A 1 528 VAL 528 527 527 VAL VAL A . n A 1 529 THR 529 528 528 THR THR A . n A 1 530 VAL 530 529 529 VAL VAL A . n A 1 531 GLU 531 530 530 GLU GLU A . n A 1 532 SER 532 531 531 SER SER A . n A 1 533 GLY 533 532 532 GLY GLY A . n A 1 534 ARG 534 533 533 ARG ARG A . n A 1 535 ARG 535 534 534 ARG ARG A . n A 1 536 LEU 536 535 535 LEU LEU A . n A 1 537 LYS 537 536 536 LYS LYS A . n A 1 538 PRO 538 537 537 PRO PRO A . n A 1 539 THR 539 538 538 THR THR A . n A 1 540 ASN 540 539 539 ASN ASN A . n A 1 541 LEU 541 540 540 LEU LEU A . n A 1 542 GLY 542 541 541 GLY GLY A . n A 1 543 ILE 543 542 542 ILE ILE A . n A 1 544 VAL 544 543 543 VAL VAL A . n A 1 545 LEU 545 544 544 LEU LEU A . n A 1 546 VAL 546 545 545 VAL VAL A . n A 1 547 HIS 547 546 546 HIS HIS A . n A 1 548 GLY 548 547 547 GLY GLY A . n A 1 549 TYR 549 548 548 TYR TYR A . n A 1 550 TYR 550 549 549 TYR TYR A . n A 1 551 LYS 551 550 550 LYS LYS A . n A 1 552 ILE 552 551 551 ILE ILE A . n A 1 553 ASP 553 552 552 ASP ASP A . n A 1 554 ALA 554 553 553 ALA ALA A . n A 1 555 GLU 555 554 554 GLU GLU A . n A 1 556 LEU 556 555 555 LEU LEU A . n A 1 557 VAL 557 556 556 VAL VAL A . n A 1 558 LEU 558 557 557 LEU LEU A . n A 1 559 PRO 559 558 558 PRO PRO A . n A 1 560 THR 560 559 559 THR THR A . n A 1 561 ILE 561 560 560 ILE ILE A . n A 1 562 ARG 562 561 561 ARG ARG A . n A 1 563 SER 563 562 562 SER SER A . n A 1 564 ALA 564 563 563 ALA ALA A . n A 1 565 VAL 565 564 564 VAL VAL A . n A 1 566 GLU 566 565 565 GLU GLU A . n A 1 567 LYS 567 566 566 LYS LYS A . n A 1 568 GLN 568 567 567 GLN GLN A . n A 1 569 LEU 569 568 568 LEU LEU A . n A 1 570 ASN 570 569 569 ASN ASN A . n A 1 571 LEU 571 570 570 LEU LEU A . n A 1 572 ILE 572 571 571 ILE ILE A . n A 1 573 ALA 573 572 572 ALA ALA A . n A 1 574 GLN 574 573 573 GLN GLN A . n A 1 575 GLY 575 574 574 GLY GLY A . n A 1 576 LYS 576 575 575 LYS LYS A . n A 1 577 ALA 577 576 576 ALA ALA A . n A 1 578 ASP 578 577 577 ASP ASP A . n A 1 579 TYR 579 578 578 TYR TYR A . n A 1 580 ARG 580 579 579 ARG ARG A . n A 1 581 GLN 581 580 580 GLN GLN A . n A 1 582 VAL 582 581 581 VAL VAL A . n A 1 583 LEU 583 582 582 LEU LEU A . n A 1 584 GLY 584 583 583 GLY GLY A . n A 1 585 HIS 585 584 584 HIS HIS A . n A 1 586 THR 586 585 585 THR THR A . n A 1 587 LEU 587 586 586 LEU LEU A . n A 1 588 ASP 588 587 587 ASP ASP A . n A 1 589 VAL 589 588 588 VAL VAL A . n A 1 590 PHE 590 589 589 PHE PHE A . n A 1 591 LYS 591 590 590 LYS LYS A . n A 1 592 ARG 592 591 591 ARG ARG A . n A 1 593 LYS 593 592 592 LYS LYS A . n A 1 594 PHE 594 593 593 PHE PHE A . n A 1 595 HIS 595 594 594 HIS HIS A . n A 1 596 TYR 596 595 595 TYR TYR A . n A 1 597 PHE 597 596 596 PHE PHE A . n A 1 598 VAL 598 597 597 VAL VAL A . n A 1 599 ASP 599 598 598 ASP ASP A . n A 1 600 SER 600 599 599 SER SER A . n A 1 601 ILE 601 600 600 ILE ILE A . n A 1 602 ALA 602 601 601 ALA ALA A . n A 1 603 GLY 603 602 602 GLY GLY A . n A 1 604 MET 604 603 603 MET MET A . n A 1 605 ASP 605 604 604 ASP ASP A . n A 1 606 GLU 606 605 605 GLU GLU A . n A 1 607 LEU 607 606 606 LEU LEU A . n A 1 608 MET 608 607 607 MET MET A . n A 1 609 GLU 609 608 608 GLU GLU A . n A 1 610 VAL 610 609 609 VAL VAL A . n A 1 611 SER 611 610 610 SER SER A . n A 1 612 PHE 612 611 611 PHE PHE A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 ALA 2 2 2 ALA ALA B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 VAL 4 4 4 VAL VAL B . n B 2 5 ALA 5 5 5 ALA ALA B . n B 2 6 GLY 6 6 6 GLY GLY B . n B 2 7 ALA 7 7 7 ALA ALA B . n B 2 8 ALA 8 8 8 ALA ALA B . n B 2 9 LEU 9 9 9 LEU LEU B . n B 2 10 SER 10 10 10 SER SER B . n B 2 11 GLN 11 11 11 GLN GLN B . n B 2 12 ALA 12 12 12 ALA ALA B . n B 2 13 GLY 13 13 13 GLY GLY B . n B 2 14 TRP 14 14 14 TRP TRP B . n B 2 15 TYR 15 15 15 TYR TYR B . n B 2 16 LEU 16 16 16 LEU LEU B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 ASP 18 18 18 ASP ASP B . n B 2 19 GLU 19 19 19 GLU GLU B . n B 2 20 GLY 20 20 20 GLY GLY B . n B 2 21 ILE 21 21 21 ILE ILE B . n B 2 22 GLU 22 22 22 GLU GLU B . n B 2 23 ALA 23 23 23 ALA ALA B . n B 2 24 CYS 24 24 24 CYS CYS B . n B 2 25 THR 25 25 25 THR THR B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 SER 27 27 27 SER SER B . n B 2 28 PRO 28 28 28 PRO PRO B . n B 2 29 ASP 29 29 29 ASP ASP B . n B 2 30 LYS 30 30 30 LYS LYS B . n B 2 31 VAL 31 31 31 VAL VAL B . n B 2 32 ASN 32 32 32 ASN ASN B . n B 2 33 VAL 33 33 33 VAL VAL B . n B 2 34 ASN 34 34 34 ASN ASN B . n B 2 35 ASP 35 35 35 ASP ASP B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 ILE 37 37 37 ILE ILE B . n B 2 38 LEU 38 38 38 LEU LEU B . n B 2 39 ILE 39 39 39 ILE ILE B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 LEU 41 41 41 LEU LEU B . n B 2 42 ASN 42 42 42 ASN ASN B . n B 2 43 THR 43 43 43 THR THR B . n B 2 44 ASP 44 44 44 ASP ASP B . n B 2 45 LEU 45 45 45 LEU LEU B . n B 2 46 ARG 46 46 46 ARG ARG B . n B 2 47 THR 47 47 47 THR THR B . n B 2 48 ILE 48 48 48 ILE ILE B . n B 2 49 GLY 49 49 49 GLY GLY B . n B 2 50 LYS 50 50 50 LYS LYS B . n B 2 51 LYS 51 51 51 LYS LYS B . n B 2 52 PHE 52 52 52 PHE PHE B . n B 2 53 LEU 53 53 53 LEU LEU B . n B 2 54 PRO 54 54 54 PRO PRO B . n B 2 55 SER 55 55 55 SER SER B . n B 2 56 ASP 56 56 56 ASP ASP B . n B 2 57 ILE 57 57 57 ILE ILE B . n B 2 58 ASN 58 58 58 ASN ASN B . n B 2 59 SER 59 59 59 SER SER B . n B 2 60 GLY 60 60 60 GLY GLY B . n B 2 61 LYS 61 61 61 LYS LYS B . n B 2 62 VAL 62 62 62 VAL VAL B . n B 2 63 GLU 63 63 63 GLU GLU B . n B 2 64 LYS 64 64 64 LYS LYS B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 GLU 66 66 66 GLU GLU B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 PRO 68 68 68 PRO PRO B . n B 2 69 CYS 69 69 69 CYS CYS B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 GLN 72 72 72 GLN GLN B . n B 2 73 ILE 73 73 73 ILE ILE B . n B 2 74 GLN 74 74 74 GLN GLN B . n B 2 75 LYS 75 75 75 LYS LYS B . n B 2 76 ILE 76 76 76 ILE ILE B . n B 2 77 ARG 77 77 77 ARG ARG B . n B 2 78 ASN 78 78 78 ASN ASN B . n B 2 79 VAL 79 79 79 VAL VAL B . n B 2 80 ALA 80 80 80 ALA ALA B . n B 2 81 ALA 81 81 81 ALA ALA B . n B 2 82 PRO 82 82 82 PRO PRO B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 ASP 84 84 84 ASP ASP B . n B 2 85 ASN 85 85 85 ASN ASN B . n B 2 86 GLU 86 86 86 GLU GLU B . n B 2 87 GLU 87 87 87 GLU GLU B . n B 2 88 SER 88 88 88 SER SER B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 ALA 90 90 90 ALA ALA B . n B 2 91 ALA 91 91 91 ALA ALA B . n B 2 92 PRO 92 92 92 PRO PRO B . n B 2 93 ARG 93 93 93 ARG ARG B . n B 2 94 MET 94 94 94 MET MET B . n B 2 95 LEU 95 95 95 LEU LEU B . n B 2 96 ARG 96 96 96 ARG ARG B . n B 2 97 LEU 97 97 97 LEU LEU B . n B 2 98 GLN 98 98 98 GLN GLN B . n B 2 99 MET 99 99 99 MET MET B . n B 2 100 THR 100 100 100 THR THR B . n B 2 101 ASP 101 101 101 ASP ASP B . n B 2 102 GLY 102 102 102 GLY GLY B . n B 2 103 HIS 103 103 103 HIS HIS B . n B 2 104 ILE 104 104 104 ILE ILE B . n B 2 105 SER 105 105 105 SER SER B . n B 2 106 CYS 106 106 106 CYS CYS B . n B 2 107 THR 107 107 107 THR THR B . n B 2 108 ALA 108 108 108 ALA ALA B . n B 2 109 VAL 109 109 109 VAL VAL B . n B 2 110 GLU 110 110 110 GLU GLU B . n B 2 111 PHE 111 111 111 PHE PHE B . n B 2 112 SER 112 112 112 SER SER B . n B 2 113 TYR 113 113 113 TYR TYR B . n B 2 114 MET 114 114 114 MET MET B . n B 2 115 SER 115 115 115 SER SER B . n B 2 116 LYS 116 116 116 LYS LYS B . n B 2 117 ILE 117 117 117 ILE ILE B . n B 2 118 SER 118 118 118 SER SER B . n B 2 119 LEU 119 119 119 LEU LEU B . n B 2 120 ASN 120 120 120 ASN ASN B . n B 2 121 THR 121 121 121 THR THR B . n B 2 122 PRO 122 122 122 PRO PRO B . n B 2 123 PRO 123 123 123 PRO PRO B . n B 2 124 GLY 124 124 124 GLY GLY B . n B 2 125 THR 125 125 125 THR THR B . n B 2 126 LYS 126 126 126 LYS LYS B . n B 2 127 VAL 127 127 127 VAL VAL B . n B 2 128 LYS 128 128 128 LYS LYS B . n B 2 129 LEU 129 129 129 LEU LEU B . n B 2 130 SER 130 130 130 SER SER B . n B 2 131 GLY 131 131 131 GLY GLY B . n B 2 132 ILE 132 132 132 ILE ILE B . n B 2 133 VAL 133 133 133 VAL VAL B . n B 2 134 ASP 134 134 134 ASP ASP B . n B 2 135 ILE 135 135 135 ILE ILE B . n B 2 136 LYS 136 136 136 LYS LYS B . n B 2 137 ASN 137 137 137 ASN ASN B . n B 2 138 GLY 138 138 138 GLY GLY B . n B 2 139 PHE 139 139 139 PHE PHE B . n B 2 140 LEU 140 140 140 LEU LEU B . n B 2 141 LEU 141 141 141 LEU LEU B . n B 2 142 LEU 142 142 142 LEU LEU B . n B 2 143 ASN 143 143 143 ASN ASN B . n B 2 144 ASP 144 144 144 ASP ASP B . n B 2 145 SER 145 145 145 SER SER B . n B 2 146 ASN 146 146 146 ASN ASN B . n B 2 147 THR 147 147 147 THR THR B . n B 2 148 THR 148 148 148 THR THR B . n B 2 149 VAL 149 149 149 VAL VAL B . n B 2 150 LEU 150 150 150 LEU LEU B . n B 2 151 GLY 151 151 151 GLY GLY B . n B 2 152 GLY 152 152 152 GLY GLY B . n B 2 153 GLU 153 153 153 GLU GLU B . n B 2 154 VAL 154 154 154 VAL VAL B . n B 2 155 GLU 155 155 155 GLU GLU B . n B 2 156 HIS 156 156 156 HIS HIS B . n B 2 157 LEU 157 157 157 LEU LEU B . n B 2 158 ILE 158 158 158 ILE ILE B . n B 2 159 GLU 159 159 159 GLU GLU B . n B 2 160 LYS 160 160 160 LYS LYS B . n B 2 161 TRP 161 161 161 TRP TRP B . n C 3 1 A 1 -3 -3 A A E . n C 3 2 C 2 -2 -2 C C E . n C 3 3 U 3 -1 -1 U U E . n C 3 4 A 4 0 0 A A E . n C 3 5 A 5 1 1 A A E . n C 3 6 A 6 2 2 A A E . n C 3 7 A 7 3 3 A A E . n C 3 8 U 8 4 4 U U E . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN 1 701 2 MN MN A . E 4 MN 1 702 3 MN MN A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9CAG _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9CAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9CAG _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9CAG _struct.title 'Human TOP3B-TDRD3 core complex in RNA pre-cleavage state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9CAG _struct_keywords.text 'Topoisomerase, ISOMERASE-RNA complex' _struct_keywords.pdbx_keywords ISOMERASE/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TOP3B_HUMAN O95985 ? 1 ;MKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGHVMTLDFLGKYNKWDKVDPAE LFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDKEGENICFEVLDAVLPVMNKAHGGEKTVFRARFSSITDTDI CNAMACLGEPDHNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY WVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLALNTVEMLRVASSSLGMGPQH AMQTAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATEAE LGGDAWRLYEYITRHFIATVSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEVMPWQSVPLEESLPTCQRGDAFPVGE VKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTI RSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSIAGMDELMEVSF ; 1 2 UNP TDRD3_HUMAN Q9H7E2 Q9H7E2-3 2 ;MAQVAGAALSQAGWYLSDEGIEACTSSPDKVNVNDIILIALNTDLRTIGKKFLPSDINSGKVEKLEGPCVLQIQKIRNVA APKDNEESQAAPRMLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNGFLLLNDSNTTVLGGEVEHLIEK W ; 1 3 PDB 9CAG 9CAG ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9CAG A 2 ? 612 ? O95985 1 ? 611 ? 1 611 2 2 9CAG B 1 ? 161 ? Q9H7E2 1 ? 161 ? 1 161 3 3 9CAG E 1 ? 8 ? 9CAG -3 ? 4 ? -3 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9CAG VAL A 1 ? UNP O95985 ? ? 'expression tag' 0 1 1 9CAG PHE A 337 ? UNP O95985 TYR 336 'engineered mutation' 336 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 11 ? ARG A 24 ? LYS A 10 ARG A 23 1 ? 14 HELX_P HELX_P2 AA2 GLY A 69 ? VAL A 77 ? GLY A 68 VAL A 76 5 ? 9 HELX_P HELX_P3 AA3 ASP A 78 ? PHE A 83 ? ASP A 77 PHE A 82 5 ? 6 HELX_P HELX_P4 AA4 ASN A 98 ? GLY A 107 ? ASN A 97 GLY A 106 1 ? 10 HELX_P HELX_P5 AA5 ASP A 120 ? LEU A 135 ? ASP A 119 LEU A 134 1 ? 16 HELX_P HELX_P6 AA6 PRO A 136 ? MET A 138 ? PRO A 135 MET A 137 5 ? 3 HELX_P HELX_P7 AA7 THR A 157 ? CYS A 167 ? THR A 156 CYS A 166 1 ? 11 HELX_P HELX_P8 AA8 ASP A 172 ? GLN A 202 ? ASP A 171 GLN A 201 1 ? 31 HELX_P HELX_P9 AA9 GLY A 203 ? LYS A 204 ? GLY A 202 LYS A 203 5 ? 2 HELX_P HELX_P10 AB1 TYR A 205 ? ASP A 209 ? TYR A 204 ASP A 208 5 ? 5 HELX_P HELX_P11 AB2 GLN A 219 ? SER A 235 ? GLN A 218 SER A 234 1 ? 17 HELX_P HELX_P12 AB3 ASP A 267 ? LYS A 279 ? ASP A 266 LYS A 278 1 ? 13 HELX_P HELX_P13 AB4 ASN A 303 ? SER A 314 ? ASN A 302 SER A 313 1 ? 12 HELX_P HELX_P14 AB5 GLY A 318 ? GLN A 332 ? GLY A 317 GLN A 331 1 ? 15 HELX_P HELX_P15 AB6 ASP A 350 ? GLN A 357 ? ASP A 349 GLN A 356 1 ? 8 HELX_P HELX_P16 AB7 TRP A 364 ? GLY A 375 ? TRP A 363 GLY A 374 1 ? 12 HELX_P HELX_P17 AB8 GLY A 404 ? VAL A 421 ? GLY A 403 VAL A 420 1 ? 18 HELX_P HELX_P18 AB9 PRO A 451 ? VAL A 456 ? PRO A 450 VAL A 455 5 ? 6 HELX_P HELX_P19 AC1 THR A 496 ? GLY A 508 ? THR A 495 GLY A 507 1 ? 13 HELX_P HELX_P20 AC2 SER A 514 ? ARG A 525 ? SER A 513 ARG A 524 1 ? 12 HELX_P HELX_P21 AC3 THR A 539 ? ALA A 554 ? THR A 538 ALA A 553 1 ? 16 HELX_P HELX_P22 AC4 GLU A 555 ? LEU A 558 ? GLU A 554 LEU A 557 5 ? 4 HELX_P HELX_P23 AC5 PRO A 559 ? GLN A 574 ? PRO A 558 GLN A 573 1 ? 16 HELX_P HELX_P24 AC6 ASP A 578 ? SER A 600 ? ASP A 577 SER A 599 1 ? 23 HELX_P HELX_P25 AC7 ILE A 601 ? GLU A 609 ? ILE A 600 GLU A 608 1 ? 9 HELX_P HELX_P26 AC8 ALA B 2 ? GLY B 13 ? ALA B 2 GLY B 13 1 ? 12 HELX_P HELX_P27 AC9 SER B 17 ? CYS B 24 ? SER B 17 CYS B 24 1 ? 8 HELX_P HELX_P28 AD1 VAL B 33 ? LEU B 41 ? VAL B 33 LEU B 41 1 ? 9 HELX_P HELX_P29 AD2 ASP B 44 ? GLY B 49 ? ASP B 44 GLY B 49 1 ? 6 HELX_P HELX_P30 AD3 ASP B 56 ? GLY B 60 ? ASP B 56 GLY B 60 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 10 OE2 ? ? ? 1_555 E MN . MN ? ? A GLU 9 A MN 702 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc2 metalc ? ? A ASP 118 OD2 ? ? ? 1_555 E MN . MN ? ? A ASP 117 A MN 702 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc3 metalc ? ? A GLU 341 OE2 ? ? ? 1_555 D MN . MN ? ? A GLU 340 A MN 701 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc4 metalc ? ? A ASP 512 OD2 ? ? ? 1_555 D MN . MN ? ? A ASP 511 A MN 701 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc5 metalc ? ? E MN . MN ? ? ? 1_555 C A 6 "O3'" ? ? A MN 702 E A 2 1_555 ? ? ? ? ? ? ? 2.761 ? ? metalc6 metalc ? ? E MN . MN ? ? ? 1_555 C A 7 OP1 ? ? A MN 702 E A 3 1_555 ? ? ? ? ? ? ? 2.080 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 10 ? A GLU 9 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 65.9 ? 2 OE2 ? A GLU 10 ? A GLU 9 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 "O3'" ? C A 6 ? E A 2 ? 1_555 76.6 ? 3 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 "O3'" ? C A 6 ? E A 2 ? 1_555 128.9 ? 4 OE2 ? A GLU 10 ? A GLU 9 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 OP1 ? C A 7 ? E A 3 ? 1_555 83.8 ? 5 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 OP1 ? C A 7 ? E A 3 ? 1_555 83.1 ? 6 "O3'" ? C A 6 ? E A 2 ? 1_555 MN ? E MN . ? A MN 702 ? 1_555 OP1 ? C A 7 ? E A 3 ? 1_555 58.7 ? 7 OE2 ? A GLU 341 ? A GLU 340 ? 1_555 MN ? D MN . ? A MN 701 ? 1_555 OD2 ? A ASP 512 ? A ASP 511 ? 1_555 73.1 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 7 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 28 ? LYS A 31 ? SER A 27 LYS A 30 AA1 2 SER A 38 ? THR A 45 ? SER A 37 THR A 44 AA1 3 PRO A 50 ? SER A 57 ? PRO A 49 SER A 56 AA1 4 LYS A 3 ? ALA A 9 ? LYS A 2 ALA A 8 AA1 5 TYR A 112 ? TRP A 116 ? TYR A 111 TRP A 115 AA1 6 VAL A 148 ? ARG A 150 ? VAL A 147 ARG A 149 AA2 1 LEU A 65 ? PHE A 67 ? LEU A 64 PHE A 66 AA2 2 THR A 88 ? LYS A 90 ? THR A 87 LYS A 89 AA3 1 ALA A 476 ? PHE A 477 ? ALA A 475 PHE A 476 AA3 2 ALA A 284 ? LYS A 296 ? ALA A 283 LYS A 295 AA3 3 CYS A 425 ? ILE A 436 ? CYS A 424 ILE A 435 AA3 4 GLU A 439 ? SER A 450 ? GLU A 438 SER A 449 AA3 5 SER A 255 ? TRP A 260 ? SER A 254 TRP A 259 AA3 6 THR A 240 ? ASN A 249 ? THR A 239 ASN A 248 AA3 7 VAL A 479 ? GLN A 488 ? VAL A 478 GLN A 487 AA4 1 VAL A 528 ? VAL A 530 ? VAL A 527 VAL A 529 AA4 2 LEU A 536 ? PRO A 538 ? LEU A 535 PRO A 537 AA5 1 LYS B 64 ? LEU B 65 ? LYS B 64 LEU B 65 AA5 2 VAL B 133 ? ASP B 134 ? VAL B 133 ASP B 134 AA6 1 PHE B 139 ? LEU B 142 ? PHE B 139 LEU B 142 AA6 2 SER B 105 ? GLU B 110 ? SER B 105 GLU B 110 AA6 3 LEU B 95 ? THR B 100 ? LEU B 95 THR B 100 AA6 4 CYS B 69 ? ASN B 78 ? CYS B 69 ASN B 78 AA6 5 LYS B 126 ? LEU B 129 ? LYS B 126 LEU B 129 AA6 6 THR B 147 ? GLY B 151 ? THR B 147 GLY B 151 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 30 ? N HIS A 29 O VAL A 39 ? O VAL A 38 AA1 2 3 N HIS A 40 ? N HIS A 39 O MET A 55 ? O MET A 54 AA1 3 4 O ARG A 52 ? O ARG A 51 N LYS A 3 ? N LYS A 2 AA1 4 5 N LEU A 6 ? N LEU A 5 O VAL A 114 ? O VAL A 113 AA1 5 6 N LEU A 115 ? N LEU A 114 O PHE A 149 ? O PHE A 148 AA2 1 2 N ASP A 66 ? N ASP A 65 O GLU A 89 ? O GLU A 88 AA3 1 2 O PHE A 477 ? O PHE A 476 N ALA A 284 ? N ALA A 283 AA3 2 3 N LYS A 296 ? N LYS A 295 O CYS A 425 ? O CYS A 424 AA3 3 4 N LYS A 426 ? N LYS A 425 O LEU A 449 ? O LEU A 448 AA3 4 5 O THR A 442 ? O THR A 441 N ASP A 259 ? N ASP A 258 AA3 5 6 O LEU A 258 ? O LEU A 257 N ALA A 246 ? N ALA A 245 AA3 6 7 N VAL A 243 ? N VAL A 242 O LEU A 485 ? O LEU A 484 AA4 1 2 N THR A 529 ? N THR A 528 O LYS A 537 ? O LYS A 536 AA5 1 2 N LEU B 65 ? N LEU B 65 O VAL B 133 ? O VAL B 133 AA6 1 2 O LEU B 142 ? O LEU B 142 N VAL B 109 ? N VAL B 109 AA6 2 3 O CYS B 106 ? O CYS B 106 N MET B 99 ? N MET B 99 AA6 3 4 O ARG B 96 ? O ARG B 96 N ARG B 77 ? N ARG B 77 AA6 4 5 N LEU B 71 ? N LEU B 71 O VAL B 127 ? O VAL B 127 AA6 5 6 N LYS B 128 ? N LYS B 128 O THR B 148 ? O THR B 148 # _pdbx_entry_details.entry_id 9CAG _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 E _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 3 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 E _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 4 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.525 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.082 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 91 ? ? 179.87 160.54 2 1 ASN A 93 ? ? 52.60 71.64 3 1 PRO A 216 ? ? -69.58 0.52 4 1 LYS A 251 ? ? 71.72 -7.13 5 1 ASP A 252 ? ? -121.31 -52.85 6 1 ARG A 263 ? ? 62.03 66.46 7 1 SER A 335 ? ? -69.82 -174.97 8 1 TRP A 458 ? ? 160.34 -27.50 9 1 GLN A 459 ? ? -93.55 51.39 10 1 PRO B 54 ? ? -61.47 -179.98 11 1 SER B 115 ? ? -84.69 47.65 12 1 LYS B 136 ? ? -90.82 -60.34 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9CAG _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9CAG _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.33 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 140000 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 6.8 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'human TOP3B-TDRD3 core complex with RNA' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 9CAG _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9CAG _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9CAG _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 GLN N N N N 160 GLN CA C N S 161 GLN C C N N 162 GLN O O N N 163 GLN CB C N N 164 GLN CG C N N 165 GLN CD C N N 166 GLN OE1 O N N 167 GLN NE2 N N N 168 GLN OXT O N N 169 GLN H H N N 170 GLN H2 H N N 171 GLN HA H N N 172 GLN HB2 H N N 173 GLN HB3 H N N 174 GLN HG2 H N N 175 GLN HG3 H N N 176 GLN HE21 H N N 177 GLN HE22 H N N 178 GLN HXT H N N 179 GLU N N N N 180 GLU CA C N S 181 GLU C C N N 182 GLU O O N N 183 GLU CB C N N 184 GLU CG C N N 185 GLU CD C N N 186 GLU OE1 O N N 187 GLU OE2 O N N 188 GLU OXT O N N 189 GLU H H N N 190 GLU H2 H N N 191 GLU HA H N N 192 GLU HB2 H N N 193 GLU HB3 H N N 194 GLU HG2 H N N 195 GLU HG3 H N N 196 GLU HE2 H N N 197 GLU HXT H N N 198 GLY N N N N 199 GLY CA C N N 200 GLY C C N N 201 GLY O O N N 202 GLY OXT O N N 203 GLY H H N N 204 GLY H2 H N N 205 GLY HA2 H N N 206 GLY HA3 H N N 207 GLY HXT H N N 208 HIS N N N N 209 HIS CA C N S 210 HIS C C N N 211 HIS O O N N 212 HIS CB C N N 213 HIS CG C Y N 214 HIS ND1 N Y N 215 HIS CD2 C Y N 216 HIS CE1 C Y N 217 HIS NE2 N Y N 218 HIS OXT O N N 219 HIS H H N N 220 HIS H2 H N N 221 HIS HA H N N 222 HIS HB2 H N N 223 HIS HB3 H N N 224 HIS HD1 H N N 225 HIS HD2 H N N 226 HIS HE1 H N N 227 HIS HE2 H N N 228 HIS HXT H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 MN MN MN N N 319 PHE N N N N 320 PHE CA C N S 321 PHE C C N N 322 PHE O O N N 323 PHE CB C N N 324 PHE CG C Y N 325 PHE CD1 C Y N 326 PHE CD2 C Y N 327 PHE CE1 C Y N 328 PHE CE2 C Y N 329 PHE CZ C Y N 330 PHE OXT O N N 331 PHE H H N N 332 PHE H2 H N N 333 PHE HA H N N 334 PHE HB2 H N N 335 PHE HB3 H N N 336 PHE HD1 H N N 337 PHE HD2 H N N 338 PHE HE1 H N N 339 PHE HE2 H N N 340 PHE HZ H N N 341 PHE HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 THR N N N N 374 THR CA C N S 375 THR C C N N 376 THR O O N N 377 THR CB C N R 378 THR OG1 O N N 379 THR CG2 C N N 380 THR OXT O N N 381 THR H H N N 382 THR H2 H N N 383 THR HA H N N 384 THR HB H N N 385 THR HG1 H N N 386 THR HG21 H N N 387 THR HG22 H N N 388 THR HG23 H N N 389 THR HXT H N N 390 TRP N N N N 391 TRP CA C N S 392 TRP C C N N 393 TRP O O N N 394 TRP CB C N N 395 TRP CG C Y N 396 TRP CD1 C Y N 397 TRP CD2 C Y N 398 TRP NE1 N Y N 399 TRP CE2 C Y N 400 TRP CE3 C Y N 401 TRP CZ2 C Y N 402 TRP CZ3 C Y N 403 TRP CH2 C Y N 404 TRP OXT O N N 405 TRP H H N N 406 TRP H2 H N N 407 TRP HA H N N 408 TRP HB2 H N N 409 TRP HB3 H N N 410 TRP HD1 H N N 411 TRP HE1 H N N 412 TRP HE3 H N N 413 TRP HZ2 H N N 414 TRP HZ3 H N N 415 TRP HH2 H N N 416 TRP HXT H N N 417 TYR N N N N 418 TYR CA C N S 419 TYR C C N N 420 TYR O O N N 421 TYR CB C N N 422 TYR CG C Y N 423 TYR CD1 C Y N 424 TYR CD2 C Y N 425 TYR CE1 C Y N 426 TYR CE2 C Y N 427 TYR CZ C Y N 428 TYR OH O N N 429 TYR OXT O N N 430 TYR H H N N 431 TYR H2 H N N 432 TYR HA H N N 433 TYR HB2 H N N 434 TYR HB3 H N N 435 TYR HD1 H N N 436 TYR HD2 H N N 437 TYR HE1 H N N 438 TYR HE2 H N N 439 TYR HH H N N 440 TYR HXT H N N 441 U OP3 O N N 442 U P P N N 443 U OP1 O N N 444 U OP2 O N N 445 U "O5'" O N N 446 U "C5'" C N N 447 U "C4'" C N R 448 U "O4'" O N N 449 U "C3'" C N S 450 U "O3'" O N N 451 U "C2'" C N R 452 U "O2'" O N N 453 U "C1'" C N R 454 U N1 N N N 455 U C2 C N N 456 U O2 O N N 457 U N3 N N N 458 U C4 C N N 459 U O4 O N N 460 U C5 C N N 461 U C6 C N N 462 U HOP3 H N N 463 U HOP2 H N N 464 U "H5'" H N N 465 U "H5''" H N N 466 U "H4'" H N N 467 U "H3'" H N N 468 U "HO3'" H N N 469 U "H2'" H N N 470 U "HO2'" H N N 471 U "H1'" H N N 472 U H3 H N N 473 U H5 H N N 474 U H6 H N N 475 VAL N N N N 476 VAL CA C N S 477 VAL C C N N 478 VAL O O N N 479 VAL CB C N N 480 VAL CG1 C N N 481 VAL CG2 C N N 482 VAL OXT O N N 483 VAL H H N N 484 VAL H2 H N N 485 VAL HA H N N 486 VAL HB H N N 487 VAL HG11 H N N 488 VAL HG12 H N N 489 VAL HG13 H N N 490 VAL HG21 H N N 491 VAL HG22 H N N 492 VAL HG23 H N N 493 VAL HXT H N N 494 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 GLN N CA sing N N 158 GLN N H sing N N 159 GLN N H2 sing N N 160 GLN CA C sing N N 161 GLN CA CB sing N N 162 GLN CA HA sing N N 163 GLN C O doub N N 164 GLN C OXT sing N N 165 GLN CB CG sing N N 166 GLN CB HB2 sing N N 167 GLN CB HB3 sing N N 168 GLN CG CD sing N N 169 GLN CG HG2 sing N N 170 GLN CG HG3 sing N N 171 GLN CD OE1 doub N N 172 GLN CD NE2 sing N N 173 GLN NE2 HE21 sing N N 174 GLN NE2 HE22 sing N N 175 GLN OXT HXT sing N N 176 GLU N CA sing N N 177 GLU N H sing N N 178 GLU N H2 sing N N 179 GLU CA C sing N N 180 GLU CA CB sing N N 181 GLU CA HA sing N N 182 GLU C O doub N N 183 GLU C OXT sing N N 184 GLU CB CG sing N N 185 GLU CB HB2 sing N N 186 GLU CB HB3 sing N N 187 GLU CG CD sing N N 188 GLU CG HG2 sing N N 189 GLU CG HG3 sing N N 190 GLU CD OE1 doub N N 191 GLU CD OE2 sing N N 192 GLU OE2 HE2 sing N N 193 GLU OXT HXT sing N N 194 GLY N CA sing N N 195 GLY N H sing N N 196 GLY N H2 sing N N 197 GLY CA C sing N N 198 GLY CA HA2 sing N N 199 GLY CA HA3 sing N N 200 GLY C O doub N N 201 GLY C OXT sing N N 202 GLY OXT HXT sing N N 203 HIS N CA sing N N 204 HIS N H sing N N 205 HIS N H2 sing N N 206 HIS CA C sing N N 207 HIS CA CB sing N N 208 HIS CA HA sing N N 209 HIS C O doub N N 210 HIS C OXT sing N N 211 HIS CB CG sing N N 212 HIS CB HB2 sing N N 213 HIS CB HB3 sing N N 214 HIS CG ND1 sing Y N 215 HIS CG CD2 doub Y N 216 HIS ND1 CE1 doub Y N 217 HIS ND1 HD1 sing N N 218 HIS CD2 NE2 sing Y N 219 HIS CD2 HD2 sing N N 220 HIS CE1 NE2 sing Y N 221 HIS CE1 HE1 sing N N 222 HIS NE2 HE2 sing N N 223 HIS OXT HXT sing N N 224 ILE N CA sing N N 225 ILE N H sing N N 226 ILE N H2 sing N N 227 ILE CA C sing N N 228 ILE CA CB sing N N 229 ILE CA HA sing N N 230 ILE C O doub N N 231 ILE C OXT sing N N 232 ILE CB CG1 sing N N 233 ILE CB CG2 sing N N 234 ILE CB HB sing N N 235 ILE CG1 CD1 sing N N 236 ILE CG1 HG12 sing N N 237 ILE CG1 HG13 sing N N 238 ILE CG2 HG21 sing N N 239 ILE CG2 HG22 sing N N 240 ILE CG2 HG23 sing N N 241 ILE CD1 HD11 sing N N 242 ILE CD1 HD12 sing N N 243 ILE CD1 HD13 sing N N 244 ILE OXT HXT sing N N 245 LEU N CA sing N N 246 LEU N H sing N N 247 LEU N H2 sing N N 248 LEU CA C sing N N 249 LEU CA CB sing N N 250 LEU CA HA sing N N 251 LEU C O doub N N 252 LEU C OXT sing N N 253 LEU CB CG sing N N 254 LEU CB HB2 sing N N 255 LEU CB HB3 sing N N 256 LEU CG CD1 sing N N 257 LEU CG CD2 sing N N 258 LEU CG HG sing N N 259 LEU CD1 HD11 sing N N 260 LEU CD1 HD12 sing N N 261 LEU CD1 HD13 sing N N 262 LEU CD2 HD21 sing N N 263 LEU CD2 HD22 sing N N 264 LEU CD2 HD23 sing N N 265 LEU OXT HXT sing N N 266 LYS N CA sing N N 267 LYS N H sing N N 268 LYS N H2 sing N N 269 LYS CA C sing N N 270 LYS CA CB sing N N 271 LYS CA HA sing N N 272 LYS C O doub N N 273 LYS C OXT sing N N 274 LYS CB CG sing N N 275 LYS CB HB2 sing N N 276 LYS CB HB3 sing N N 277 LYS CG CD sing N N 278 LYS CG HG2 sing N N 279 LYS CG HG3 sing N N 280 LYS CD CE sing N N 281 LYS CD HD2 sing N N 282 LYS CD HD3 sing N N 283 LYS CE NZ sing N N 284 LYS CE HE2 sing N N 285 LYS CE HE3 sing N N 286 LYS NZ HZ1 sing N N 287 LYS NZ HZ2 sing N N 288 LYS NZ HZ3 sing N N 289 LYS OXT HXT sing N N 290 MET N CA sing N N 291 MET N H sing N N 292 MET N H2 sing N N 293 MET CA C sing N N 294 MET CA CB sing N N 295 MET CA HA sing N N 296 MET C O doub N N 297 MET C OXT sing N N 298 MET CB CG sing N N 299 MET CB HB2 sing N N 300 MET CB HB3 sing N N 301 MET CG SD sing N N 302 MET CG HG2 sing N N 303 MET CG HG3 sing N N 304 MET SD CE sing N N 305 MET CE HE1 sing N N 306 MET CE HE2 sing N N 307 MET CE HE3 sing N N 308 MET OXT HXT sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PRO N CA sing N N 333 PRO N CD sing N N 334 PRO N H sing N N 335 PRO CA C sing N N 336 PRO CA CB sing N N 337 PRO CA HA sing N N 338 PRO C O doub N N 339 PRO C OXT sing N N 340 PRO CB CG sing N N 341 PRO CB HB2 sing N N 342 PRO CB HB3 sing N N 343 PRO CG CD sing N N 344 PRO CG HG2 sing N N 345 PRO CG HG3 sing N N 346 PRO CD HD2 sing N N 347 PRO CD HD3 sing N N 348 PRO OXT HXT sing N N 349 SER N CA sing N N 350 SER N H sing N N 351 SER N H2 sing N N 352 SER CA C sing N N 353 SER CA CB sing N N 354 SER CA HA sing N N 355 SER C O doub N N 356 SER C OXT sing N N 357 SER CB OG sing N N 358 SER CB HB2 sing N N 359 SER CB HB3 sing N N 360 SER OG HG sing N N 361 SER OXT HXT sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 U OP3 P sing N N 431 U OP3 HOP3 sing N N 432 U P OP1 doub N N 433 U P OP2 sing N N 434 U P "O5'" sing N N 435 U OP2 HOP2 sing N N 436 U "O5'" "C5'" sing N N 437 U "C5'" "C4'" sing N N 438 U "C5'" "H5'" sing N N 439 U "C5'" "H5''" sing N N 440 U "C4'" "O4'" sing N N 441 U "C4'" "C3'" sing N N 442 U "C4'" "H4'" sing N N 443 U "O4'" "C1'" sing N N 444 U "C3'" "O3'" sing N N 445 U "C3'" "C2'" sing N N 446 U "C3'" "H3'" sing N N 447 U "O3'" "HO3'" sing N N 448 U "C2'" "O2'" sing N N 449 U "C2'" "C1'" sing N N 450 U "C2'" "H2'" sing N N 451 U "O2'" "HO2'" sing N N 452 U "C1'" N1 sing N N 453 U "C1'" "H1'" sing N N 454 U N1 C2 sing N N 455 U N1 C6 sing N N 456 U C2 O2 doub N N 457 U C2 N3 sing N N 458 U N3 C4 sing N N 459 U N3 H3 sing N N 460 U C4 O4 doub N N 461 U C4 C5 sing N N 462 U C5 C6 doub N N 463 U C5 H5 sing N N 464 U C6 H6 sing N N 465 VAL N CA sing N N 466 VAL N H sing N N 467 VAL N H2 sing N N 468 VAL CA C sing N N 469 VAL CA CB sing N N 470 VAL CA HA sing N N 471 VAL C O doub N N 472 VAL C OXT sing N N 473 VAL CB CG1 sing N N 474 VAL CB CG2 sing N N 475 VAL CB HB sing N N 476 VAL CG1 HG11 sing N N 477 VAL CG1 HG12 sing N N 478 VAL CG1 HG13 sing N N 479 VAL CG2 HG21 sing N N 480 VAL CG2 HG22 sing N N 481 VAL CG2 HG23 sing N N 482 VAL OXT HXT sing N N 483 # _em_admin.current_status REL _em_admin.deposition_date 2024-06-17 _em_admin.deposition_site RCSB _em_admin.entry_id 9CAG _em_admin.last_update 2025-02-05 _em_admin.map_release_date 2025-02-05 _em_admin.title 'Human TOP3B-TDRD3 core complex in RNA pre-cleavage state' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 54.4 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' ? 1 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' 'United States' ? 2 # _atom_sites.entry_id 9CAG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MN N O P S # loop_