HEADER CHAPERONE 19-JUL-24 9CQJ TITLE CRYSTAL STRUCTURE OF GAGA-DOG HSP47(36-418) IN COMPLEX WITH ADNECTIN- TITLE 2 53 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERPIN H1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 36-418; COMPND 5 SYNONYM: HSP47, COLLAGEN-BINDING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTI-HSP47 ADNECTIN-53; COMPND 9 CHAIN: D, E; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: DERIVED FROM HUMAN FIBRONECTIN TYPE III TENTH DOMAIN COMPND 12 (RESIDUES 1416-1509 OF 1FNF), BUT NOT ONLY ARE THE RESIDUES IN THE COMPND 13 BC, DE, FG LOOPS VARIED, THE LENGTHS OF THE LOOPS ARE ALSO VARIED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 GENE: SERPINH1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CHAPERONE, SERPIN H1 EXPDTA X-RAY DIFFRACTION AUTHOR S.SHERIFF REVDAT 3 20-NOV-24 9CQJ 1 JRNL REVDAT 2 13-NOV-24 9CQJ 1 JRNL REVDAT 1 30-OCT-24 9CQJ 0 JRNL AUTH K.KISH,S.COBELL,N.SZAPIEL,C.YAN,J.A.NEWITT,J.TREDUP, JRNL AUTH 2 I.RODRIGO,E.TOMASCO,M.GAO,F.MARSILIO,J.HAUGNER,D.LIPOVSEK, JRNL AUTH 3 B.DENG,P.BOUSQUET,Y.ZHANG,H.SCHMIDT,S.SHERIFF JRNL TITL IMPROVING THE DIFFRACTION QUALITY OF HEAT-SHOCK PROTEIN 47 JRNL TITL 2 CRYSTALS. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 80 302 2024 JRNL REFN ESSN 2053-230X JRNL PMID 39397789 JRNL DOI 10.1107/S2053230X24009233 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.8 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.2 REMARK 3 NUMBER OF REFLECTIONS : 46990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2359 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 18.48 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3102 REMARK 3 BIN FREE R VALUE : 0.3568 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 46 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29540 REMARK 3 B22 (A**2) : 0.73020 REMARK 3 B33 (A**2) : -0.43490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.350 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.337 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.229 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 14407 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 26061 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4235 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 2312 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7383 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 975 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 11154 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.15 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.95 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9CQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1000286077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.8, STARANISO 2.3.87 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46990 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.075 REMARK 200 RESOLUTION RANGE LOW (A) : 78.216 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 6.440 REMARK 200 R MERGE (I) : 0.07910 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 6.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 78.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.45 REMARK 200 R MERGE FOR SHELL (I) : 0.04150 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 29.19 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, PH 7.5, 25% (W/V) PEG REMARK 280 3350, 200 MM LITHIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.40600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.52850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.40600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.52850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 ALA A 35 REMARK 465 ASP A 416 REMARK 465 GLU A 417 REMARK 465 LEU A 418 REMARK 465 GLY B 32 REMARK 465 ALA B 33 REMARK 465 GLY B 411 REMARK 465 ASP B 412 REMARK 465 LYS B 413 REMARK 465 MET B 414 REMARK 465 ARG B 415 REMARK 465 ASP B 416 REMARK 465 GLU B 417 REMARK 465 LEU B 418 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 VAL D 3 REMARK 465 HIS D 100 REMARK 465 HIS D 101 REMARK 465 HIS D 102 REMARK 465 HIS D 103 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 465 VAL E 3 REMARK 465 SER E 4 REMARK 465 HIS E 100 REMARK 465 HIS E 101 REMARK 465 HIS E 102 REMARK 465 HIS E 103 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 45 CD OE1 OE2 REMARK 470 LYS A 94 CD CE NZ REMARK 470 GLN A 101 CG CD OE1 NE2 REMARK 470 LEU A 102 CG CD1 CD2 REMARK 470 ARG A 103 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 GLU A 144 CD OE1 OE2 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 167 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 HIS A 274 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 279 CD OE1 OE2 REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 LYS A 299 NZ REMARK 470 LYS A 343 CG CD CE NZ REMARK 470 ILE A 370 CG1 CG2 CD1 REMARK 470 ARG A 373 CZ NH1 NH2 REMARK 470 GLU A 374 CG CD OE1 OE2 REMARK 470 ARG A 377 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 393 CD NE CZ NH1 NH2 REMARK 470 GLN A 396 CG CD OE1 NE2 REMARK 470 LYS A 410 CD CE NZ REMARK 470 LYS A 413 CG CD CE NZ REMARK 470 ARG A 415 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 45 CD OE1 OE2 REMARK 470 LYS B 86 CG CD CE NZ REMARK 470 GLN B 101 CG CD OE1 NE2 REMARK 470 ARG B 103 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 ASN B 120 CG OD1 ND2 REMARK 470 SER B 121 OG REMARK 470 THR B 122 OG1 CG2 REMARK 470 ARG B 124 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 148 NE CZ NH1 NH2 REMARK 470 ARG B 164 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 167 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 175 CG CD OE1 OE2 REMARK 470 ARG B 228 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 249 CG CD OE1 OE2 REMARK 470 HIS B 274 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 299 NZ REMARK 470 LYS B 343 CG CD CE NZ REMARK 470 ILE B 370 CG1 CG2 CD1 REMARK 470 ARG B 373 CZ NH1 NH2 REMARK 470 GLU B 374 CG CD OE1 OE2 REMARK 470 ARG B 377 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 396 CG CD OE1 NE2 REMARK 470 SER D 4 OG REMARK 470 ASP D 5 CG OD1 OD2 REMARK 470 ARG D 8 NE CZ NH1 NH2 REMARK 470 TYR D 25 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 28 CG CD OE1 OE2 REMARK 470 SER D 45 OG REMARK 470 ASP E 5 CG OD1 OD2 REMARK 470 TYR E 25 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU E 28 CG CD OE1 OE2 REMARK 470 GLN E 29 CG CD OE1 NE2 REMARK 470 SER E 45 OG REMARK 470 HIS E 99 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 371 HG1 THR D 51 1.48 REMARK 500 HH11 ARG A 239 OH TYR A 243 1.55 REMARK 500 O LEU A 43 HG SER A 47 1.55 REMARK 500 HD1 HIS A 108 OH TYR A 154 1.55 REMARK 500 HH11 ARG B 239 OH TYR B 243 1.55 REMARK 500 OD1 ASP B 247 HE2 HIS B 273 1.55 REMARK 500 HG1 THR B 240 OH TYR E 82 1.56 REMARK 500 OG1 THR A 122 HG1 THR A 127 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH22 ARG A 133 OE1 GLU D 55 2555 1.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 -89.87 -108.92 REMARK 500 ALA A 87 -115.95 47.51 REMARK 500 GLN A 101 20.96 -79.90 REMARK 500 VAL A 126 -62.44 -128.96 REMARK 500 THR A 195 47.79 -109.70 REMARK 500 ASP A 196 -14.86 -149.27 REMARK 500 ALA A 261 122.12 -33.48 REMARK 500 LEU A 326 62.95 -105.62 REMARK 500 LEU A 337 43.53 -108.87 REMARK 500 LYS A 410 -62.72 -16.36 REMARK 500 ASP A 412 15.35 -146.54 REMARK 500 GLU B 65 -87.52 -108.89 REMARK 500 ALA B 87 -116.01 47.47 REMARK 500 SER B 119 40.90 -82.63 REMARK 500 VAL B 126 -62.09 -128.81 REMARK 500 THR B 195 47.82 -109.75 REMARK 500 ASP B 196 -15.04 -149.16 REMARK 500 ALA B 261 122.33 -34.18 REMARK 500 LEU B 326 62.72 -105.74 REMARK 500 LEU B 337 43.72 -108.94 REMARK 500 ASP D 5 32.54 -85.93 REMARK 500 ASN E 44 10.55 57.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 9CQJ A 36 418 UNP C7C419 C7C419_CANLF 36 418 DBREF 9CQJ B 36 418 UNP C7C419 C7C419_CANLF 36 418 DBREF 9CQJ D 1 103 PDB 9CQJ 9CQJ 1 103 DBREF 9CQJ E 1 103 PDB 9CQJ 9CQJ 1 103 SEQADV 9CQJ GLY A 32 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ ALA A 33 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ GLY A 34 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ ALA A 35 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ GLY B 32 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ ALA B 33 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ GLY B 34 UNP C7C419 EXPRESSION TAG SEQADV 9CQJ ALA B 35 UNP C7C419 EXPRESSION TAG SEQRES 1 A 387 GLY ALA GLY ALA LEU SER PRO LYS ALA ALA THR LEU ALA SEQRES 2 A 387 GLU ARG SER ALA GLY LEU ALA PHE SER LEU TYR GLN ALA SEQRES 3 A 387 MET ALA LYS ASP GLN ALA VAL GLU ASN ILE LEU LEU SER SEQRES 4 A 387 PRO VAL VAL VAL ALA SER SER LEU GLY LEU VAL SER LEU SEQRES 5 A 387 GLY GLY LYS ALA THR THR ALA SER GLN ALA LYS ALA VAL SEQRES 6 A 387 LEU SER ALA GLU GLN LEU ARG ASP GLU GLU VAL HIS ALA SEQRES 7 A 387 GLY LEU GLY GLU LEU LEU ARG SER LEU SER ASN SER THR SEQRES 8 A 387 ALA ARG ASN VAL THR TRP LYS LEU GLY SER ARG LEU TYR SEQRES 9 A 387 GLY PRO SER SER VAL SER PHE ALA GLU ASP PHE VAL ARG SEQRES 10 A 387 SER SER LYS GLN HIS TYR ASN CYS GLU HIS SER LYS ILE SEQRES 11 A 387 ASN PHE ARG ASP LYS ARG SER ALA LEU GLN SER ILE ASN SEQRES 12 A 387 GLU TRP ALA ALA GLN THR THR ASP GLY LYS LEU PRO GLU SEQRES 13 A 387 VAL THR LYS ASP VAL GLU ARG THR ASP GLY ALA LEU LEU SEQRES 14 A 387 VAL ASN ALA MET PHE PHE LYS PRO HIS TRP ASP GLU LYS SEQRES 15 A 387 PHE HIS HIS LYS MET VAL ASP ASN ARG GLY PHE MET VAL SEQRES 16 A 387 THR ARG SER TYR THR VAL GLY VAL THR MET MET HIS ARG SEQRES 17 A 387 THR GLY LEU TYR ASN TYR TYR ASP ASP GLU LYS GLU LYS SEQRES 18 A 387 LEU GLN ILE VAL GLU MET PRO LEU ALA HIS LYS LEU SER SEQRES 19 A 387 SER LEU ILE ILE LEU MET PRO HIS HIS VAL GLU PRO LEU SEQRES 20 A 387 GLU ARG LEU GLU LYS LEU LEU THR LYS GLU GLN LEU LYS SEQRES 21 A 387 ILE TRP MET GLY LYS MET GLN LYS LYS ALA VAL ALA ILE SEQRES 22 A 387 SER LEU PRO LYS GLY VAL VAL GLU VAL THR HIS ASP LEU SEQRES 23 A 387 GLN LYS HIS LEU ALA GLY LEU GLY LEU THR GLU ALA ILE SEQRES 24 A 387 ASP LYS ASN LYS ALA ASP LEU SER ARG MET SER GLY LYS SEQRES 25 A 387 LYS ASP LEU TYR LEU ALA SER VAL PHE HIS ALA THR ALA SEQRES 26 A 387 PHE GLU TRP ASP THR GLU GLY ASN PRO PHE ASP GLN ASP SEQRES 27 A 387 ILE TYR GLY ARG GLU GLU LEU ARG SER PRO LYS LEU PHE SEQRES 28 A 387 TYR ALA ASP HIS PRO PHE ILE PHE LEU VAL ARG ASP THR SEQRES 29 A 387 GLN SER GLY SER LEU LEU PHE ILE GLY ARG LEU VAL ARG SEQRES 30 A 387 PRO LYS GLY ASP LYS MET ARG ASP GLU LEU SEQRES 1 B 387 GLY ALA GLY ALA LEU SER PRO LYS ALA ALA THR LEU ALA SEQRES 2 B 387 GLU ARG SER ALA GLY LEU ALA PHE SER LEU TYR GLN ALA SEQRES 3 B 387 MET ALA LYS ASP GLN ALA VAL GLU ASN ILE LEU LEU SER SEQRES 4 B 387 PRO VAL VAL VAL ALA SER SER LEU GLY LEU VAL SER LEU SEQRES 5 B 387 GLY GLY LYS ALA THR THR ALA SER GLN ALA LYS ALA VAL SEQRES 6 B 387 LEU SER ALA GLU GLN LEU ARG ASP GLU GLU VAL HIS ALA SEQRES 7 B 387 GLY LEU GLY GLU LEU LEU ARG SER LEU SER ASN SER THR SEQRES 8 B 387 ALA ARG ASN VAL THR TRP LYS LEU GLY SER ARG LEU TYR SEQRES 9 B 387 GLY PRO SER SER VAL SER PHE ALA GLU ASP PHE VAL ARG SEQRES 10 B 387 SER SER LYS GLN HIS TYR ASN CYS GLU HIS SER LYS ILE SEQRES 11 B 387 ASN PHE ARG ASP LYS ARG SER ALA LEU GLN SER ILE ASN SEQRES 12 B 387 GLU TRP ALA ALA GLN THR THR ASP GLY LYS LEU PRO GLU SEQRES 13 B 387 VAL THR LYS ASP VAL GLU ARG THR ASP GLY ALA LEU LEU SEQRES 14 B 387 VAL ASN ALA MET PHE PHE LYS PRO HIS TRP ASP GLU LYS SEQRES 15 B 387 PHE HIS HIS LYS MET VAL ASP ASN ARG GLY PHE MET VAL SEQRES 16 B 387 THR ARG SER TYR THR VAL GLY VAL THR MET MET HIS ARG SEQRES 17 B 387 THR GLY LEU TYR ASN TYR TYR ASP ASP GLU LYS GLU LYS SEQRES 18 B 387 LEU GLN ILE VAL GLU MET PRO LEU ALA HIS LYS LEU SER SEQRES 19 B 387 SER LEU ILE ILE LEU MET PRO HIS HIS VAL GLU PRO LEU SEQRES 20 B 387 GLU ARG LEU GLU LYS LEU LEU THR LYS GLU GLN LEU LYS SEQRES 21 B 387 ILE TRP MET GLY LYS MET GLN LYS LYS ALA VAL ALA ILE SEQRES 22 B 387 SER LEU PRO LYS GLY VAL VAL GLU VAL THR HIS ASP LEU SEQRES 23 B 387 GLN LYS HIS LEU ALA GLY LEU GLY LEU THR GLU ALA ILE SEQRES 24 B 387 ASP LYS ASN LYS ALA ASP LEU SER ARG MET SER GLY LYS SEQRES 25 B 387 LYS ASP LEU TYR LEU ALA SER VAL PHE HIS ALA THR ALA SEQRES 26 B 387 PHE GLU TRP ASP THR GLU GLY ASN PRO PHE ASP GLN ASP SEQRES 27 B 387 ILE TYR GLY ARG GLU GLU LEU ARG SER PRO LYS LEU PHE SEQRES 28 B 387 TYR ALA ASP HIS PRO PHE ILE PHE LEU VAL ARG ASP THR SEQRES 29 B 387 GLN SER GLY SER LEU LEU PHE ILE GLY ARG LEU VAL ARG SEQRES 30 B 387 PRO LYS GLY ASP LYS MET ARG ASP GLU LEU SEQRES 1 D 103 MET GLY VAL SER ASP VAL PRO ARG ASP LEU GLU VAL VAL SEQRES 2 D 103 ALA ALA THR PRO THR SER LEU LEU ILE SER TRP TYR HIS SEQRES 3 D 103 PRO GLU GLN TYR THR GLU TYR TYR ARG ILE THR TYR GLY SEQRES 4 D 103 GLU THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL SEQRES 5 D 103 PRO GLY GLU ARG GLU THR ALA THR ILE SER GLY LEU LYS SEQRES 6 D 103 PRO GLY VAL ASP TYR THR ILE THR VAL TYR ALA VAL GLY SEQRES 7 D 103 ALA GLU GLN TYR GLY GLY GLY PRO ASP ALA PRO ILE SER SEQRES 8 D 103 ILE ASN TYR ARG THR PRO HIS HIS HIS HIS HIS HIS SEQRES 1 E 103 MET GLY VAL SER ASP VAL PRO ARG ASP LEU GLU VAL VAL SEQRES 2 E 103 ALA ALA THR PRO THR SER LEU LEU ILE SER TRP TYR HIS SEQRES 3 E 103 PRO GLU GLN TYR THR GLU TYR TYR ARG ILE THR TYR GLY SEQRES 4 E 103 GLU THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL SEQRES 5 E 103 PRO GLY GLU ARG GLU THR ALA THR ILE SER GLY LEU LYS SEQRES 6 E 103 PRO GLY VAL ASP TYR THR ILE THR VAL TYR ALA VAL GLY SEQRES 7 E 103 ALA GLU GLN TYR GLY GLY GLY PRO ASP ALA PRO ILE SER SEQRES 8 E 103 ILE ASN TYR ARG THR PRO HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *109(H2 O) HELIX 1 AA1 SER A 37 ASP A 61 1 25 HELIX 2 AA2 SER A 70 GLY A 84 1 15 HELIX 3 AA3 ALA A 87 LEU A 97 1 11 HELIX 4 AA4 ARG A 103 SER A 117 1 15 HELIX 5 AA5 LEU A 118 ASN A 120 5 3 HELIX 6 AA6 ALA A 143 ASN A 155 1 13 HELIX 7 AA7 ASP A 165 THR A 181 1 17 HELIX 8 AA8 ALA A 261 LYS A 263 5 3 HELIX 9 AA9 LEU A 278 LEU A 284 1 7 HELIX 10 AB1 THR A 286 LYS A 296 1 11 HELIX 11 AB2 LEU A 317 GLY A 323 1 7 HELIX 12 AB3 LEU A 326 ASP A 331 1 6 HELIX 13 AB4 LEU A 337 GLY A 342 1 6 HELIX 14 AB5 ASP A 367 ARG A 377 5 11 HELIX 15 AB6 SER B 37 ASP B 61 1 25 HELIX 16 AB7 SER B 70 GLY B 84 1 15 HELIX 17 AB8 ALA B 87 LEU B 97 1 11 HELIX 18 AB9 ARG B 103 SER B 117 1 15 HELIX 19 AC1 LEU B 118 SER B 121 5 4 HELIX 20 AC2 ALA B 143 ASN B 155 1 13 HELIX 21 AC3 ASP B 165 THR B 181 1 17 HELIX 22 AC4 ALA B 261 LYS B 263 5 3 HELIX 23 AC5 LEU B 278 LEU B 284 1 7 HELIX 24 AC6 THR B 286 LYS B 296 1 11 HELIX 25 AC7 LEU B 317 GLY B 323 1 7 HELIX 26 AC8 LEU B 326 ASP B 331 1 6 HELIX 27 AC9 LEU B 337 GLY B 342 1 6 HELIX 28 AD1 ASP B 367 ARG B 377 5 11 HELIX 29 AD2 GLY D 78 TYR D 82 5 5 HELIX 30 AD3 GLY E 78 TYR E 82 5 5 SHEET 1 AA1 8 ILE A 67 LEU A 69 0 SHEET 2 AA1 8 LEU A 400 LEU A 406 -1 O ILE A 403 N LEU A 69 SHEET 3 AA1 8 PHE A 388 ASP A 394 -1 N PHE A 390 O GLY A 404 SHEET 4 AA1 8 SER A 265 PRO A 272 -1 N ILE A 268 O LEU A 391 SHEET 5 AA1 8 LEU A 253 PRO A 259 -1 N MET A 258 O LEU A 267 SHEET 6 AA1 8 TYR A 230 ASP A 248 -1 N ASP A 248 O LEU A 253 SHEET 7 AA1 8 GLN A 298 ASP A 316 -1 O VAL A 302 N GLY A 241 SHEET 8 AA1 8 VAL A 219 THR A 227 0 SHEET 1 AA2 7 CYS A 156 ILE A 161 0 SHEET 2 AA2 7 TRP A 128 PRO A 137 1 N LEU A 134 O GLU A 157 SHEET 3 AA2 7 ALA A 198 PHE A 206 -1 O LEU A 199 N TYR A 135 SHEET 4 AA2 7 LEU A 348 TRP A 359 1 O ALA A 354 N ASN A 202 SHEET 5 AA2 7 GLN A 298 ASP A 316 -1 N GLY A 309 O TRP A 359 SHEET 6 AA2 7 TYR A 230 ASP A 248 -1 N GLY A 241 O VAL A 302 SHEET 7 AA2 7 LYS A 380 TYR A 383 0 SHEET 1 AA3 8 ILE B 67 LEU B 69 0 SHEET 2 AA3 8 LEU B 400 LEU B 406 -1 O ILE B 403 N LEU B 69 SHEET 3 AA3 8 PHE B 388 ASP B 394 -1 N VAL B 392 O LEU B 401 SHEET 4 AA3 8 SER B 265 PRO B 272 -1 N ILE B 268 O LEU B 391 SHEET 5 AA3 8 LEU B 253 PRO B 259 -1 N MET B 258 O LEU B 267 SHEET 6 AA3 8 THR B 231 ASP B 248 -1 N ASP B 248 O LEU B 253 SHEET 7 AA3 8 GLN B 298 ASP B 316 -1 O VAL B 302 N GLY B 241 SHEET 8 AA3 8 VAL B 219 MET B 225 0 SHEET 1 AA4 7 CYS B 156 ILE B 161 0 SHEET 2 AA4 7 TRP B 128 PRO B 137 1 N LEU B 134 O GLU B 157 SHEET 3 AA4 7 ALA B 198 PHE B 206 -1 O LEU B 199 N TYR B 135 SHEET 4 AA4 7 LEU B 348 TRP B 359 1 O ALA B 354 N ASN B 202 SHEET 5 AA4 7 GLN B 298 ASP B 316 -1 N VAL B 311 O PHE B 357 SHEET 6 AA4 7 THR B 231 ASP B 248 -1 N GLY B 241 O VAL B 302 SHEET 7 AA4 7 LYS B 380 TYR B 383 0 SHEET 1 AA5 3 ARG D 8 THR D 16 0 SHEET 2 AA5 3 SER D 19 TYR D 25 -1 O TYR D 25 N ARG D 8 SHEET 3 AA5 3 THR D 58 SER D 62 -1 O ALA D 59 N ILE D 22 SHEET 1 AA6 4 GLN D 48 PRO D 53 0 SHEET 2 AA6 4 TYR D 33 GLU D 40 -1 N ILE D 36 O PHE D 50 SHEET 3 AA6 4 ASP D 69 VAL D 77 -1 O TYR D 75 N ARG D 35 SHEET 4 AA6 4 PRO D 89 ARG D 95 -1 O ILE D 92 N ILE D 72 SHEET 1 AA7 3 ARG E 8 THR E 16 0 SHEET 2 AA7 3 SER E 19 TYR E 25 -1 O TYR E 25 N ARG E 8 SHEET 3 AA7 3 THR E 58 SER E 62 -1 O ALA E 59 N ILE E 22 SHEET 1 AA8 4 GLN E 48 PRO E 53 0 SHEET 2 AA8 4 TYR E 33 GLU E 40 -1 N ILE E 36 O PHE E 50 SHEET 3 AA8 4 ASP E 69 VAL E 77 -1 O TYR E 75 N ARG E 35 SHEET 4 AA8 4 PRO E 89 ARG E 95 -1 O ILE E 92 N ILE E 72 CRYST1 86.812 129.057 78.216 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011519 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007749 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012785 0.00000 MASTER 399 0 0 30 44 0 0 6 7329 4 0 76 END