HEADER CELL ADHESION 23-JUL-24 9CSE TITLE CRYSTAL STRUCTURE OF REPEATS-IN-TOXIN-LIKE DOMAIN FROM AEROMONAS TITLE 2 HYDROPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LARGE ADHESION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LAP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROMONAS HYDROPHILA; SOURCE 3 ORGANISM_TAXID: 644; SOURCE 4 ATCC: 7966; SOURCE 5 GENE: AHA_3491; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS RTX PROTEINS, ADHESIN, GRAM-NEGATIVE BACTERIA, PUTATIVE LIGAND- KEYWDS 2 BINDING DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Q.YE,T.D.R.VANCE,P.L.DAVIES REVDAT 2 28-MAY-25 9CSE 1 JRNL REVDAT 1 14-MAY-25 9CSE 0 JRNL AUTH Q.YE,R.EVES,T.D.R.VANCE,T.HANSEN,A.P.SAGE,A.PETKOVIC, JRNL AUTH 2 B.BRADLEY,C.ESCOBEDO,L.A.GRAHAM,J.S.ALLINGHAM,P.L.DAVIES JRNL TITL AEROMONAS HYDROPHILA RTX ADHESIN HAS THREE LIGAND-BINDING JRNL TITL 2 DOMAINS THAT GIVE THE BACTERIUM THE POTENTIAL TO ADHERE TO JRNL TITL 3 AND AGGREGATE A WIDE VARIETY OF CELL TYPES. JRNL REF MBIO V. 16 15824 2025 JRNL REFN ESSN 2150-7511 JRNL PMID 40243363 JRNL DOI 10.1128/MBIO.03158-24 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 23607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1197 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1721 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2100 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.75000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.164 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.737 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2145 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1925 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2906 ; 1.596 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4476 ; 1.376 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 290 ; 7.912 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;36.914 ;25.326 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 321 ;12.798 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;10.349 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2476 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 415 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1163 ; 3.256 ; 3.556 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1162 ; 3.251 ; 3.551 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1451 ; 4.670 ; 5.319 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1452 ; 4.668 ; 5.325 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 982 ; 3.719 ; 3.811 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 983 ; 3.717 ; 3.813 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1455 ; 5.470 ; 5.587 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2372 ; 8.235 ;44.401 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2327 ; 8.173 ;44.035 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9CSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1000286049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.53484 REMARK 200 MONOCHROMATOR : AXILON DOUBLE CRYSTAL/MULTI REMARK 200 -LAYER MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24829 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 1.65700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THIN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, MES, ACETATE CALCIUM, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.85500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.85500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.80150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.66350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.80150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.66350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.85500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.80150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.66350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.85500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.80150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.66350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4147 REMARK 465 ALA A 4148 REMARK 465 SER A 4149 REMARK 465 SER A 4150 REMARK 465 HIS A 4151 REMARK 465 HIS A 4152 REMARK 465 HIS A 4153 REMARK 465 HIS A 4154 REMARK 465 HIS A 4155 REMARK 465 HIS A 4156 REMARK 465 SER A 4157 REMARK 465 SER A 4158 REMARK 465 GLY A 4159 REMARK 465 LEU A 4160 REMARK 465 VAL A 4161 REMARK 465 PRO A 4162 REMARK 465 ARG A 4163 REMARK 465 GLY A 4164 REMARK 465 SER A 4165 REMARK 465 HIS A 4166 REMARK 465 MET A 4167 REMARK 465 SER A 4459 REMARK 465 ILE A 4460 REMARK 465 ARG A 4461 REMARK 465 MET A 4462 REMARK 465 SER A 4463 REMARK 465 TYR A 4464 REMARK 465 PHE A 4465 REMARK 465 LEU A 4466 REMARK 465 SER A 4467 REMARK 465 THR A 4468 REMARK 465 GLU A 4469 REMARK 465 GLY A 4470 REMARK 465 GLU A 4471 REMARK 465 PRO A 4472 REMARK 465 GLY A 4473 REMARK 465 ASP A 4474 REMARK 465 GLN A 4475 REMARK 465 ASN A 4476 REMARK 465 ARG A 4477 REMARK 465 THR A 4478 REMARK 465 TYR A 4479 REMARK 465 GLY A 4480 REMARK 465 ASN A 4481 REMARK 465 GLU A 4482 REMARK 465 HIS A 4483 REMARK 465 ASN A 4484 REMARK 465 ILE A 4485 REMARK 465 VAL A 4486 REMARK 465 VAL A 4487 REMARK 465 GLY A 4488 REMARK 465 ASP A 4489 REMARK 465 LEU A 4490 REMARK 465 ASP A 4491 REMARK 465 GLY A 4492 REMARK 465 SER A 4493 REMARK 465 VAL A 4494 REMARK 465 VAL A 4495 REMARK 465 LEU A 4496 REMARK 465 PRO A 4497 REMARK 465 GLY A 4498 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A4218 -167.48 -78.87 REMARK 500 SER A4219 -55.81 -135.90 REMARK 500 VAL A4446 -66.46 69.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A4826 DISTANCE = 6.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4513 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A4169 O REMARK 620 2 ASP A4171 OD1 55.5 REMARK 620 3 ASP A4368 OD2 160.6 107.8 REMARK 620 4 GLU A4373 OE2 95.0 86.1 93.4 REMARK 620 5 GLU A4445 OE2 91.0 146.4 104.7 100.1 REMARK 620 6 HOH A4675 O 113.0 128.3 67.8 143.8 58.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4512 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A4218 OD2 REMARK 620 2 THR A4220 O 82.8 REMARK 620 3 ASP A4224 OD2 95.2 80.9 REMARK 620 4 GLY A4240 O 95.9 91.8 165.8 REMARK 620 5 ASP A4243 OD1 122.9 151.8 85.0 96.3 REMARK 620 6 ASP A4243 OD2 75.1 156.3 109.3 82.2 51.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4507 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A4229 O REMARK 620 2 GLY A4231 O 92.1 REMARK 620 3 ASP A4233 OD2 79.5 89.5 REMARK 620 4 GLY A4247 O 82.3 173.9 91.9 REMARK 620 5 ALA A4249 O 84.9 83.4 162.6 93.6 REMARK 620 6 ASP A4252 OD1 165.6 85.3 86.3 100.8 108.8 REMARK 620 7 ASP A4252 OD2 144.1 117.5 117.9 67.0 79.4 46.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4514 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A4237 OG REMARK 620 2 ASP A4263 OD1 118.7 REMARK 620 3 HOH A4708 O 130.3 97.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4509 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A4248 O REMARK 620 2 GLY A4250 O 107.2 REMARK 620 3 ASP A4252 OD2 84.5 85.2 REMARK 620 4 GLY A4267 O 80.8 171.6 93.2 REMARK 620 5 THR A4269 O 82.7 81.3 157.7 102.6 REMARK 620 6 ASP A4272 OD1 167.3 82.7 88.6 89.0 107.0 REMARK 620 7 ASP A4272 OD2 134.5 109.6 124.1 64.6 77.4 43.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4510 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A4257 O REMARK 620 2 ASP A4263 OD2 88.6 REMARK 620 3 ALA A4276 O 87.2 92.4 REMARK 620 4 LEU A4278 O 83.6 160.4 105.0 REMARK 620 5 ASP A4281 OD1 168.1 81.3 99.5 103.9 REMARK 620 6 ASP A4281 OD2 140.6 124.4 72.0 70.7 51.3 REMARK 620 7 HOH A4628 O 84.4 84.0 170.9 77.4 88.3 116.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4508 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A4268 O REMARK 620 2 GLY A4270 O 108.8 REMARK 620 3 ASP A4272 OD2 84.0 84.8 REMARK 620 4 GLY A4285 O 80.3 170.9 95.9 REMARK 620 5 ALA A4287 O 85.6 76.5 154.4 105.4 REMARK 620 6 ASP A4290 OD1 161.9 82.8 83.1 88.3 111.2 REMARK 620 7 ASP A4290 OD2 138.2 103.8 124.9 68.3 77.3 45.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4506 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A4286 O REMARK 620 2 GLY A4288 O 106.9 REMARK 620 3 ASP A4290 OD2 77.9 81.1 REMARK 620 4 ASP A4328 O 91.3 157.4 89.9 REMARK 620 5 GLU A4330 OE1 144.9 88.4 136.5 83.9 REMARK 620 6 GLU A4330 OE2 160.2 80.0 85.1 78.6 51.5 REMARK 620 7 HOH A4695 O 70.4 101.9 147.7 96.8 75.7 127.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A4511 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A4368 OD1 REMARK 620 2 ASP A4368 OD2 51.4 REMARK 620 3 ASP A4370 OD1 80.6 125.9 REMARK 620 4 ASP A4370 OD2 86.5 128.1 59.4 REMARK 620 5 SER A4372 OG 94.9 89.2 69.3 127.8 REMARK 620 6 HOH A4675 O 120.5 69.1 147.6 138.7 83.7 REMARK 620 7 HOH A4735 O 158.0 146.9 77.4 82.6 77.1 79.5 REMARK 620 N 1 2 3 4 5 6 DBREF 9CSE A 4168 4498 UNP A0KNW4 A0KNW4_AERHH 4167 4497 SEQADV 9CSE MET A 4147 UNP A0KNW4 INITIATING METHIONINE SEQADV 9CSE ALA A 4148 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE SER A 4149 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE SER A 4150 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4151 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4152 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4153 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4154 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4155 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4156 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE SER A 4157 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE SER A 4158 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE GLY A 4159 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE LEU A 4160 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE VAL A 4161 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE PRO A 4162 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE ARG A 4163 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE GLY A 4164 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE SER A 4165 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE HIS A 4166 UNP A0KNW4 EXPRESSION TAG SEQADV 9CSE MET A 4167 UNP A0KNW4 EXPRESSION TAG SEQRES 1 A 352 MET ALA SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 352 LEU VAL PRO ARG GLY SER HIS MET ALA VAL ALA ASP LYS SEQRES 3 A 352 PRO VAL VAL ASP ILE SER LEU THR GLY ASN GLY VAL PRO SEQRES 4 A 352 LEU TYR THR GLN TYR PRO SER SER GLY ILE SER THR GLY SEQRES 5 A 352 ALA PHE GLN SER GLY SER PHE ASN LYS GLY ASN PHE GLY SEQRES 6 A 352 ILE THR SER SER PHE THR ASP SER THR THR THR GLN ASP SEQRES 7 A 352 SER VAL VAL GLY THR SER GLY ASN ASP TYR ILE VAL SER SEQRES 8 A 352 VAL LYS GLY GLY GLY ASP TYR PHE VAL GLY GLY ALA GLY SEQRES 9 A 352 ASN ASP VAL LEU VAL GLY GLY ASN SER VAL SER GLY ASP SEQRES 10 A 352 THR LEU ASP GLY GLY THR GLY ASN ASP ILE LEU VAL ALA SEQRES 11 A 352 GLY LEU GLY GLY ASP THR LEU PHE GLY GLY ALA GLY THR SEQRES 12 A 352 ASP LEU ALA VAL LEU MET GLY SER ARG ALA ASN TYR VAL SEQRES 13 A 352 ILE GLU ARG ARG SER ASP GLY GLY PHE ASN PHE LEU VAL SEQRES 14 A 352 LYS GLU ASN GLY VAL THR ILE SER LYS SER LEU TYR ASP SEQRES 15 A 352 ILE GLU LEU VAL GLN PHE ASP ASP GLY ILE TYR GLN PHE SEQRES 16 A 352 ASN GLN THR ASP GLY THR LEU THR ALA VAL GLN PRO SER SEQRES 17 A 352 VAL VAL ASP TYR PRO PHE GLU ILE SER ALA SER LEU THR SEQRES 18 A 352 ASP ARG ASP GLY SER GLU GLN PHE ASP SER LEU VAL LEU SEQRES 19 A 352 THR GLY MET PRO THR GLY SER THR LEU TYR GLN GLY SER SEQRES 20 A 352 THR VAL LEU GLY THR VAL GLY ALA ASP GLY LYS LEU THR SEQRES 21 A 352 LEU THR GLY LEU TRP ASN GLN SER ALA LEU ASP VAL LYS SEQRES 22 A 352 LEU THR GLY LEU THR LEU ARG VAL PRO GLY SER SER ALA SEQRES 23 A 352 GLY GLN PHE ASP LEU LYS VAL GLU ALA ILE ALA LYS GLU SEQRES 24 A 352 VAL ALA THR ASP GLN THR SER SER ALA SER ASP GLN ASP SEQRES 25 A 352 SER ILE ARG MET SER TYR PHE LEU SER THR GLU GLY GLU SEQRES 26 A 352 PRO GLY ASP GLN ASN ARG THR TYR GLY ASN GLU HIS ASN SEQRES 27 A 352 ILE VAL VAL GLY ASP LEU ASP GLY SER VAL VAL LEU PRO SEQRES 28 A 352 GLY HET EDO A4501 4 HET EDO A4502 4 HET EDO A4503 4 HET EDO A4504 4 HET EDO A4505 4 HET CA A4506 1 HET CA A4507 1 HET CA A4508 1 HET CA A4509 1 HET CA A4510 1 HET CA A4511 1 HET CA A4512 1 HET CA A4513 1 HET CA A4514 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 CA 9(CA 2+) FORMUL 16 HOH *226(H2 O) HELIX 1 AA1 SER A 4196 GLY A 4203 1 8 HELIX 2 AA2 ASN A 4206 GLY A 4211 5 6 HELIX 3 AA3 SER A 4297 TYR A 4301 5 5 SHEET 1 AA1 3 VAL A4174 LEU A4179 0 SHEET 2 AA1 3 VAL A4355 SER A4365 -1 O SER A4363 N ASP A4176 SHEET 3 AA1 3 VAL A4184 LEU A4186 -1 N LEU A4186 O VAL A4355 SHEET 1 AA2 5 VAL A4174 LEU A4179 0 SHEET 2 AA2 5 VAL A4355 SER A4365 -1 O SER A4363 N ASP A4176 SHEET 3 AA2 5 ASP A4417 PRO A4428 -1 O VAL A4418 N ALA A4364 SHEET 4 AA2 5 THR A4388 GLN A4391 -1 N THR A4388 O ARG A4426 SHEET 5 AA2 5 THR A4394 THR A4398 -1 O GLY A4397 N LEU A4389 SHEET 1 AA3 8 SER A4214 THR A4217 0 SHEET 2 AA3 8 ASP A4233 VAL A4236 1 O TYR A4234 N PHE A4216 SHEET 3 AA3 8 VAL A4253 VAL A4255 1 O VAL A4255 N ILE A4235 SHEET 4 AA3 8 ILE A4273 VAL A4275 1 O VAL A4275 N LEU A4254 SHEET 5 AA3 8 LEU A4291 VAL A4293 1 O VAL A4293 N LEU A4274 SHEET 6 AA3 8 LEU A4331 PHE A4334 1 O GLN A4333 N ALA A4292 SHEET 7 AA3 8 GLY A4337 PHE A4341 -1 O TYR A4339 N VAL A4332 SHEET 8 AA3 8 LEU A4348 ALA A4350 -1 O THR A4349 N GLN A4340 SHEET 1 AA4 7 SER A4225 VAL A4227 0 SHEET 2 AA4 7 TYR A4244 VAL A4246 1 O VAL A4246 N VAL A4226 SHEET 3 AA4 7 THR A4264 ASP A4266 1 O ASP A4266 N PHE A4245 SHEET 4 AA4 7 THR A4282 PHE A4284 1 O PHE A4284 N LEU A4265 SHEET 5 AA4 7 VAL A4320 TYR A4327 1 O SER A4325 N LEU A4283 SHEET 6 AA4 7 PHE A4311 GLU A4317 -1 N GLU A4317 O VAL A4320 SHEET 7 AA4 7 VAL A4302 ARG A4305 -1 N VAL A4302 O LEU A4314 SHEET 1 AA5 4 LEU A4405 LEU A4407 0 SHEET 2 AA5 4 GLN A4374 THR A4381 -1 N LEU A4378 O LEU A4407 SHEET 3 AA5 4 PHE A4435 LYS A4444 -1 O LYS A4444 N GLN A4374 SHEET 4 AA5 4 THR A4448 GLN A4457 -1 O GLN A4457 N PHE A4435 LINK O VAL A4169 CA CA A4513 1555 1555 2.59 LINK OD1 ASP A4171 CA CA A4513 1555 1555 3.12 LINK OD2 ASP A4218 CA CA A4512 1555 1555 2.40 LINK O THR A4220 CA CA A4512 1555 1555 2.46 LINK OD2 ASP A4224 CA CA A4512 1555 1555 2.59 LINK O THR A4229 CA CA A4507 1555 1555 2.38 LINK O GLY A4231 CA CA A4507 1555 1555 2.34 LINK OD2 ASP A4233 CA CA A4507 1555 1555 2.31 LINK OG SER A4237 CA CA A4514 1555 1555 2.51 LINK O GLY A4240 CA CA A4512 1555 1555 2.50 LINK OD1 ASP A4243 CA CA A4512 1555 1555 2.29 LINK OD2 ASP A4243 CA CA A4512 1555 1555 2.75 LINK O GLY A4247 CA CA A4507 1555 1555 2.24 LINK O GLY A4248 CA CA A4509 1555 1555 2.42 LINK O ALA A4249 CA CA A4507 1555 1555 2.24 LINK O GLY A4250 CA CA A4509 1555 1555 2.40 LINK OD1 ASP A4252 CA CA A4507 1555 1555 2.41 LINK OD2 ASP A4252 CA CA A4507 1555 1555 3.08 LINK OD2 ASP A4252 CA CA A4509 1555 1555 2.22 LINK O GLY A4257 CA CA A4510 1555 1555 2.13 LINK OD2 ASP A4263 CA CA A4510 1555 1555 2.40 LINK OD1 ASP A4263 CA CA A4514 1555 1555 2.50 LINK O GLY A4267 CA CA A4509 1555 1555 2.28 LINK O GLY A4268 CA CA A4508 1555 1555 2.39 LINK O THR A4269 CA CA A4509 1555 1555 2.23 LINK O GLY A4270 CA CA A4508 1555 1555 2.43 LINK OD2 ASP A4272 CA CA A4508 1555 1555 2.26 LINK OD1 ASP A4272 CA CA A4509 1555 1555 2.39 LINK OD2 ASP A4272 CA CA A4509 1555 1555 3.18 LINK O ALA A4276 CA CA A4510 1555 1555 2.37 LINK O LEU A4278 CA CA A4510 1555 1555 2.38 LINK OD1 ASP A4281 CA CA A4510 1555 1555 2.01 LINK OD2 ASP A4281 CA CA A4510 1555 1555 2.82 LINK O GLY A4285 CA CA A4508 1555 1555 2.39 LINK O GLY A4286 CA CA A4506 1555 1555 2.55 LINK O ALA A4287 CA CA A4508 1555 1555 2.33 LINK O GLY A4288 CA CA A4506 1555 1555 2.27 LINK OD2 ASP A4290 CA CA A4506 1555 1555 2.32 LINK OD1 ASP A4290 CA CA A4508 1555 1555 2.38 LINK OD2 ASP A4290 CA CA A4508 1555 1555 3.06 LINK O ASP A4328 CA CA A4506 1555 1555 2.47 LINK OE1 GLU A4330 CA CA A4506 1555 1555 2.45 LINK OE2 GLU A4330 CA CA A4506 1555 1555 2.58 LINK OD1 ASP A4368 CA CA A4511 1555 1555 2.47 LINK OD2 ASP A4368 CA CA A4511 1555 1555 2.67 LINK OD2 ASP A4368 CA CA A4513 1555 1555 2.13 LINK OD1 ASP A4370 CA CA A4511 1555 1555 2.19 LINK OD2 ASP A4370 CA CA A4511 1555 1555 2.33 LINK OG SER A4372 CA CA A4511 1555 1555 2.62 LINK OE2 GLU A4373 CA CA A4513 1555 1555 2.53 LINK OE2 GLU A4445 CA CA A4513 1555 1555 2.39 LINK CA CA A4506 O HOH A4695 1555 1555 2.40 LINK CA CA A4510 O HOH A4628 1555 1555 2.48 LINK CA CA A4511 O HOH A4675 1555 1555 2.67 LINK CA CA A4511 O HOH A4735 1555 1555 2.61 LINK CA CA A4513 O HOH A4675 1555 1555 3.10 LINK CA CA A4514 O HOH A4708 1555 1555 2.71 CRYST1 67.603 103.327 95.710 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014792 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009678 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010448 0.00000 CONECT 9 2129 CONECT 24 2129 CONECT 367 2128 CONECT 377 2128 CONECT 411 2128 CONECT 439 2123 CONECT 452 2123 CONECT 468 2123 CONECT 501 2130 CONECT 521 2128 CONECT 536 2128 CONECT 537 2128 CONECT 571 2123 CONECT 575 2125 CONECT 579 2123 CONECT 584 2125 CONECT 599 2123 CONECT 600 2123 2125 CONECT 630 2126 CONECT 668 2130 CONECT 669 2126 CONECT 696 2125 CONECT 700 2124 CONECT 704 2125 CONECT 711 2124 CONECT 726 2125 CONECT 727 2124 2125 CONECT 754 2126 CONECT 763 2126 CONECT 782 2126 CONECT 783 2126 CONECT 813 2124 CONECT 817 2122 CONECT 821 2124 CONECT 826 2122 CONECT 840 2124 CONECT 841 2122 2124 CONECT 1133 2122 CONECT 1153 2122 CONECT 1154 2122 CONECT 1449 2127 CONECT 1450 2127 2129 CONECT 1468 2127 CONECT 1469 2127 CONECT 1479 2127 CONECT 1488 2129 CONECT 2009 2129 CONECT 2102 2103 2104 CONECT 2103 2102 CONECT 2104 2102 2105 CONECT 2105 2104 CONECT 2106 2107 2108 CONECT 2107 2106 CONECT 2108 2106 2109 CONECT 2109 2108 CONECT 2110 2111 2112 CONECT 2111 2110 CONECT 2112 2110 2113 CONECT 2113 2112 CONECT 2114 2115 2116 CONECT 2115 2114 CONECT 2116 2114 2117 CONECT 2117 2116 CONECT 2118 2119 2120 CONECT 2119 2118 CONECT 2120 2118 2121 CONECT 2121 2120 CONECT 2122 817 826 841 1133 CONECT 2122 1153 1154 2225 CONECT 2123 439 452 468 571 CONECT 2123 579 599 600 CONECT 2124 700 711 727 813 CONECT 2124 821 840 841 CONECT 2125 575 584 600 696 CONECT 2125 704 726 727 CONECT 2126 630 669 754 763 CONECT 2126 782 783 2158 CONECT 2127 1449 1450 1468 1469 CONECT 2127 1479 2205 2265 CONECT 2128 367 377 411 521 CONECT 2128 536 537 CONECT 2129 9 24 1450 1488 CONECT 2129 2009 2205 CONECT 2130 501 668 2238 CONECT 2158 2126 CONECT 2205 2127 2129 CONECT 2225 2122 CONECT 2238 2130 CONECT 2265 2127 MASTER 460 0 14 3 27 0 0 6 2355 1 89 28 END