HEADER TRANSFERASE 01-AUG-24 9CY2 TITLE CRYSTAL STRUCTURE OF HUMAN FARNESYL PYROPHOSPHATE SYNTHASE IN COMPLEX TITLE 2 WITH A CRYPTIC POCKET LIGAND, JDS05120 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FARNESYL PYROPHOSPHATE SYNTHASE; COMPND 3 CHAIN: F; COMPND 4 FRAGMENT: RESIDUES 67-419; COMPND 5 SYNONYM: FPS,(2E,6E)-FARNESYL DIPHOSPHATE SYNTHASE, COMPND 6 DIMETHYLALLYLTRANSTRANSFERASE,FARNESYL DIPHOSPHATE SYNTHASE, COMPND 7 GERANYLTRANSTRANSFERASE; COMPND 8 EC: 2.5.1.10,2.5.1.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FDPS, FPS, KIAA1293; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSFERASE, ENZYME-LIGAND COMPLEX, CRYPTIC POCKET BINDER, ISOPRENOID KEYWDS 2 BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR V.R.PANDYA,J.PARK REVDAT 2 08-APR-26 9CY2 1 JRNL REVDAT 1 29-OCT-25 9CY2 0 JRNL AUTH V.PANDYA,K.A.WILSON,C.Y.LEUNG,Y.S.TSANTRIZOS,J.PARK JRNL TITL DISCOVERY AND COMPUTATIONAL CHARACTERIZATION OF A NOVEL JRNL TITL 2 CRYPTIC POCKET IN HUMAN FARNESYL PYROPHOSPHATE SYNTHASE. JRNL REF J.STRUCT.BIOL. 08316 2026 JRNL REFN ESSN 1095-8657 JRNL PMID 41865847 JRNL DOI 10.1016/J.JSB.2026.108316 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 23638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.064 REMARK 3 FREE R VALUE TEST SET COUNT : 1197 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1603 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.4180 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2674 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.02700 REMARK 3 B22 (A**2) : -5.02700 REMARK 3 B33 (A**2) : 10.05300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.211 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.196 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.228 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.083 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2762 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2572 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3754 ; 1.435 ; 1.827 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5892 ; 0.502 ; 1.746 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 6.031 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 16 ;11.390 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 441 ;14.331 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 419 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3225 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 646 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 647 ; 0.231 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 56 ; 0.151 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1393 ; 0.193 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 92 ; 0.197 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1348 ; 3.298 ; 5.041 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1348 ; 3.295 ; 5.042 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1678 ; 4.771 ; 9.042 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1679 ; 4.770 ; 9.043 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1414 ; 4.393 ; 5.607 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1415 ; 4.394 ; 5.611 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2073 ; 6.592 ;10.170 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2074 ; 6.590 ;10.173 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 8 F 30 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6343 81.1274 9.8442 REMARK 3 T TENSOR REMARK 3 T11: 0.2898 T22: 0.4248 REMARK 3 T33: 0.3761 T12: -0.1578 REMARK 3 T13: -0.2004 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 11.4055 L22: 3.5570 REMARK 3 L33: 10.8963 L12: 2.4206 REMARK 3 L13: -6.4295 L23: 0.2886 REMARK 3 S TENSOR REMARK 3 S11: -0.4429 S12: 1.3101 S13: -0.1347 REMARK 3 S21: -0.3876 S22: 0.6078 S23: 0.6347 REMARK 3 S31: 0.8728 S32: -1.4288 S33: -0.1650 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 34 F 76 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4152 84.0300 12.0358 REMARK 3 T TENSOR REMARK 3 T11: 0.1864 T22: 0.2265 REMARK 3 T33: 0.2975 T12: -0.0820 REMARK 3 T13: -0.1718 T23: 0.0639 REMARK 3 L TENSOR REMARK 3 L11: 10.3578 L22: 2.3906 REMARK 3 L33: 5.7189 L12: 0.5102 REMARK 3 L13: -6.0828 L23: 0.7256 REMARK 3 S TENSOR REMARK 3 S11: 0.1894 S12: 0.9925 S13: -0.1398 REMARK 3 S21: -0.4917 S22: 0.0470 S23: 0.5000 REMARK 3 S31: -0.0559 S32: -0.9327 S33: -0.2364 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 77 F 151 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1054 84.2799 14.5193 REMARK 3 T TENSOR REMARK 3 T11: 0.0880 T22: 0.0815 REMARK 3 T33: 0.0321 T12: -0.0688 REMARK 3 T13: -0.0310 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 9.4926 L22: 4.3343 REMARK 3 L33: 2.8190 L12: -3.5945 REMARK 3 L13: -0.7687 L23: -0.3849 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: 0.3611 S13: -0.3347 REMARK 3 S21: -0.4225 S22: 0.1112 S23: 0.3545 REMARK 3 S31: 0.2519 S32: -0.3846 S33: -0.0853 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 152 F 205 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3156 85.8957 31.9598 REMARK 3 T TENSOR REMARK 3 T11: 0.0855 T22: 0.2153 REMARK 3 T33: 0.0648 T12: -0.0236 REMARK 3 T13: 0.0181 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.4664 L22: 4.8363 REMARK 3 L33: 6.6884 L12: -0.3640 REMARK 3 L13: 2.1618 L23: -3.2069 REMARK 3 S TENSOR REMARK 3 S11: 0.0906 S12: -0.7076 S13: -0.2860 REMARK 3 S21: 0.4654 S22: -0.0849 S23: -0.1013 REMARK 3 S31: -0.0248 S32: 0.3442 S33: -0.0057 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 206 F 279 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0865 78.0604 34.5796 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.2915 REMARK 3 T33: 0.3515 T12: -0.0229 REMARK 3 T13: 0.0358 T23: 0.1278 REMARK 3 L TENSOR REMARK 3 L11: 7.6092 L22: 5.4602 REMARK 3 L33: 4.3666 L12: -2.6450 REMARK 3 L13: 1.6999 L23: -3.0858 REMARK 3 S TENSOR REMARK 3 S11: 0.1268 S12: -0.4846 S13: -0.8880 REMARK 3 S21: 0.1515 S22: -0.0890 S23: 0.1297 REMARK 3 S31: 0.4477 S32: 0.2708 S33: -0.0377 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 280 F 350 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7662 71.1888 40.5288 REMARK 3 T TENSOR REMARK 3 T11: 0.3477 T22: 0.4706 REMARK 3 T33: 0.5753 T12: -0.0409 REMARK 3 T13: 0.0249 T23: 0.2182 REMARK 3 L TENSOR REMARK 3 L11: 8.5528 L22: 3.7574 REMARK 3 L33: 2.8091 L12: -4.0423 REMARK 3 L13: 2.4549 L23: -1.7692 REMARK 3 S TENSOR REMARK 3 S11: 0.1345 S12: -0.6208 S13: -0.9965 REMARK 3 S21: 0.3076 S22: 0.0105 S23: 0.0017 REMARK 3 S31: 0.4786 S32: 0.2854 S33: -0.1450 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9CY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000286400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 1.00400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.085 M HEPES (PH 7.5), 17% (W/V) PEG REMARK 280 10000, 6.8% (V/V) ETHYLENE GLYCOL, 15% (V/V) GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.95000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 55.47500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 55.47500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.47500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 55.47500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 55.47500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.42500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 55.47500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.47500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.47500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 55.47500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.47500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.42500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 36.95000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 110.95000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 110.95000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.95000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F -21 REMARK 465 GLY F -20 REMARK 465 SER F -19 REMARK 465 SER F -18 REMARK 465 HIS F -17 REMARK 465 HIS F -16 REMARK 465 HIS F -15 REMARK 465 HIS F -14 REMARK 465 HIS F -13 REMARK 465 HIS F -12 REMARK 465 SER F -11 REMARK 465 SER F -10 REMARK 465 GLY F -9 REMARK 465 ARG F -8 REMARK 465 GLU F -7 REMARK 465 ASN F -6 REMARK 465 LEU F -5 REMARK 465 TYR F -4 REMARK 465 PHE F -3 REMARK 465 GLN F -2 REMARK 465 GLY F -1 REMARK 465 HIS F 0 REMARK 465 MET F 1 REMARK 465 ASN F 2 REMARK 465 GLY F 3 REMARK 465 ASP F 4 REMARK 465 GLN F 5 REMARK 465 ASN F 6 REMARK 465 SER F 7 REMARK 465 ASP F 31 REMARK 465 GLU F 32 REMARK 465 MET F 33 REMARK 465 GLY F 181 REMARK 465 GLY F 256 REMARK 465 ARG F 351 REMARK 465 ARG F 352 REMARK 465 LYS F 353 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN F 12 CG CD OE1 NE2 REMARK 470 GLN F 15 CG CD OE1 NE2 REMARK 470 GLU F 37 CG CD OE1 OE2 REMARK 470 LYS F 57 CE NZ REMARK 470 GLU F 73 CG CD OE1 OE2 REMARK 470 ARG F 75 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 191 CG CD CE NZ REMARK 470 LYS F 223 CE NZ REMARK 470 ASP F 251 CG OD1 OD2 REMARK 470 SER F 253 OG REMARK 470 VAL F 254 CG1 CG2 REMARK 470 LYS F 257 CG CD CE NZ REMARK 470 LYS F 287 CE NZ REMARK 470 GLU F 288 CG CD OE1 OE2 REMARK 470 LYS F 293 CG CD CE NZ REMARK 470 VAL F 298 CG1 CG2 REMARK 470 GLU F 307 CG CD OE1 OE2 REMARK 470 ARG F 346 NE CZ NH1 NH2 REMARK 470 ILE F 348 CG1 CG2 CD1 REMARK 470 LYS F 350 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN F 77 69.28 -106.67 REMARK 500 VAL F 124 -73.31 -115.87 REMARK 500 LEU F 248 -61.89 -92.82 REMARK 500 REMARK 500 REMARK: NULL DBREF 9CY2 F 1 353 UNP P14324 FPPS_HUMAN 67 419 SEQADV 9CY2 MET F -21 UNP P14324 INITIATING METHIONINE SEQADV 9CY2 GLY F -20 UNP P14324 EXPRESSION TAG SEQADV 9CY2 SER F -19 UNP P14324 EXPRESSION TAG SEQADV 9CY2 SER F -18 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -17 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -16 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -15 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -14 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -13 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F -12 UNP P14324 EXPRESSION TAG SEQADV 9CY2 SER F -11 UNP P14324 EXPRESSION TAG SEQADV 9CY2 SER F -10 UNP P14324 EXPRESSION TAG SEQADV 9CY2 GLY F -9 UNP P14324 EXPRESSION TAG SEQADV 9CY2 ARG F -8 UNP P14324 EXPRESSION TAG SEQADV 9CY2 GLU F -7 UNP P14324 EXPRESSION TAG SEQADV 9CY2 ASN F -6 UNP P14324 EXPRESSION TAG SEQADV 9CY2 LEU F -5 UNP P14324 EXPRESSION TAG SEQADV 9CY2 TYR F -4 UNP P14324 EXPRESSION TAG SEQADV 9CY2 PHE F -3 UNP P14324 EXPRESSION TAG SEQADV 9CY2 GLN F -2 UNP P14324 EXPRESSION TAG SEQADV 9CY2 GLY F -1 UNP P14324 EXPRESSION TAG SEQADV 9CY2 HIS F 0 UNP P14324 EXPRESSION TAG SEQRES 1 F 375 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 F 375 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET ASN GLY ASP SEQRES 3 F 375 GLN ASN SER ASP VAL TYR ALA GLN GLU LYS GLN ASP PHE SEQRES 4 F 375 VAL GLN HIS PHE SER GLN ILE VAL ARG VAL LEU THR GLU SEQRES 5 F 375 ASP GLU MET GLY HIS PRO GLU ILE GLY ASP ALA ILE ALA SEQRES 6 F 375 ARG LEU LYS GLU VAL LEU GLU TYR ASN ALA ILE GLY GLY SEQRES 7 F 375 LYS TYR ASN ARG GLY LEU THR VAL VAL VAL ALA PHE ARG SEQRES 8 F 375 GLU LEU VAL GLU PRO ARG LYS GLN ASP ALA ASP SER LEU SEQRES 9 F 375 GLN ARG ALA TRP THR VAL GLY TRP CYS VAL GLU LEU LEU SEQRES 10 F 375 GLN ALA PHE PHE LEU VAL ALA ASP ASP ILE MET ASP SER SEQRES 11 F 375 SER LEU THR ARG ARG GLY GLN ILE CYS TRP TYR GLN LYS SEQRES 12 F 375 PRO GLY VAL GLY LEU ASP ALA ILE ASN ASP ALA ASN LEU SEQRES 13 F 375 LEU GLU ALA CYS ILE TYR ARG LEU LEU LYS LEU TYR CYS SEQRES 14 F 375 ARG GLU GLN PRO TYR TYR LEU ASN LEU ILE GLU LEU PHE SEQRES 15 F 375 LEU GLN SER SER TYR GLN THR GLU ILE GLY GLN THR LEU SEQRES 16 F 375 ASP LEU LEU THR ALA PRO GLN GLY ASN VAL ASP LEU VAL SEQRES 17 F 375 ARG PHE THR GLU LYS ARG TYR LYS SER ILE VAL LYS TYR SEQRES 18 F 375 LYS THR ALA PHE TYR SER PHE TYR LEU PRO ILE ALA ALA SEQRES 19 F 375 ALA MET TYR MET ALA GLY ILE ASP GLY GLU LYS GLU HIS SEQRES 20 F 375 ALA ASN ALA LYS LYS ILE LEU LEU GLU MET GLY GLU PHE SEQRES 21 F 375 PHE GLN ILE GLN ASP ASP TYR LEU ASP LEU PHE GLY ASP SEQRES 22 F 375 PRO SER VAL THR GLY LYS ILE GLY THR ASP ILE GLN ASP SEQRES 23 F 375 ASN LYS CYS SER TRP LEU VAL VAL GLN CYS LEU GLN ARG SEQRES 24 F 375 ALA THR PRO GLU GLN TYR GLN ILE LEU LYS GLU ASN TYR SEQRES 25 F 375 GLY GLN LYS GLU ALA GLU LYS VAL ALA ARG VAL LYS ALA SEQRES 26 F 375 LEU TYR GLU GLU LEU ASP LEU PRO ALA VAL PHE LEU GLN SEQRES 27 F 375 TYR GLU GLU ASP SER TYR SER HIS ILE MET ALA LEU ILE SEQRES 28 F 375 GLU GLN TYR ALA ALA PRO LEU PRO PRO ALA VAL PHE LEU SEQRES 29 F 375 GLY LEU ALA ARG LYS ILE TYR LYS ARG ARG LYS HET PO4 F 401 5 HET JD5 F 402 26 HETNAM PO4 PHOSPHATE ION HETNAM JD5 [({5-[4-(CYCLOPROPYLOXY)PHENYL]PYRIDIN-3-YL}AMINO) HETNAM 2 JD5 METHANEDIYL]BIS(PHOSPHONIC ACID) FORMUL 2 PO4 O4 P 3- FORMUL 3 JD5 C15 H18 N2 O7 P2 FORMUL 4 HOH *96(H2 O) HELIX 1 AA1 ASP F 8 THR F 29 1 22 HELIX 2 AA2 HIS F 35 GLU F 37 5 3 HELIX 3 AA3 ILE F 38 ALA F 53 1 16 HELIX 4 AA4 TYR F 58 VAL F 72 1 15 HELIX 5 AA5 GLU F 73 GLN F 77 5 5 HELIX 6 AA6 ASP F 78 ASP F 107 1 30 HELIX 7 AA7 TRP F 118 LYS F 121 5 4 HELIX 8 AA8 VAL F 124 LEU F 126 5 3 HELIX 9 AA9 ASP F 127 ARG F 148 1 22 HELIX 10 AB1 TYR F 152 ALA F 178 1 27 HELIX 11 AB2 ASP F 184 PHE F 188 5 5 HELIX 12 AB3 THR F 189 THR F 201 1 13 HELIX 13 AB4 THR F 201 PHE F 206 1 6 HELIX 14 AB5 PHE F 206 ALA F 217 1 12 HELIX 15 AB6 GLY F 221 GLY F 250 1 30 HELIX 16 AB7 SER F 268 ARG F 277 1 10 HELIX 17 AB8 THR F 279 TYR F 290 1 12 HELIX 18 AB9 GLU F 294 LEU F 308 1 15 HELIX 19 AC1 ASP F 309 ALA F 333 1 25 HELIX 20 AC2 PRO F 338 TYR F 349 1 12 SHEET 1 AA1 2 THR F 111 ARG F 112 0 SHEET 2 AA1 2 GLN F 115 ILE F 116 -1 O GLN F 115 N ARG F 112 CISPEP 1 ALA F 334 PRO F 335 0 11.92 CRYST1 110.950 110.950 73.900 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009013 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009013 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013532 0.00000 CONECT 2676 2677 2678 2679 2680 CONECT 2677 2676 CONECT 2678 2676 CONECT 2679 2676 CONECT 2680 2676 CONECT 2681 2682 CONECT 2682 2681 2683 2684 2685 CONECT 2683 2682 CONECT 2684 2682 CONECT 2685 2682 2686 2690 CONECT 2686 2685 2687 2688 2689 CONECT 2687 2686 CONECT 2688 2686 CONECT 2689 2686 CONECT 2690 2685 2691 CONECT 2691 2690 2692 2693 CONECT 2692 2691 2696 CONECT 2693 2691 2694 CONECT 2694 2693 2695 CONECT 2695 2694 2696 CONECT 2696 2692 2695 2697 CONECT 2697 2696 2698 2700 CONECT 2698 2697 2699 CONECT 2699 2698 2702 CONECT 2700 2697 2701 CONECT 2701 2700 2702 CONECT 2702 2699 2701 2703 CONECT 2703 2702 2704 CONECT 2704 2703 2705 2706 CONECT 2705 2704 2706 CONECT 2706 2704 2705 MASTER 457 0 2 20 2 0 0 6 2801 1 31 29 END