HEADER HYDROLASE 12-AUG-24 9D4I TITLE CRYSTAL STRUCTURE OF NI(II)-BOUND POLYSACCHARIDE DEACETYLASE FROM TITLE 2 BACTEROIDES OVATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHAGE TAIL COMPONENT DOMAIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS (STRAIN ATCC 8483 / DSM 1896 SOURCE 3 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153); SOURCE 4 ORGANISM_TAXID: 411476; SOURCE 5 STRAIN: ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / SOURCE 6 NCTC 11153; SOURCE 7 ATCC: 8483; SOURCE 8 GENE: BACOVA_03992; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.DZUONG,K.J.MCLAUGHLIN REVDAT 2 22-JAN-25 9D4I 1 JRNL REVDAT 1 25-DEC-24 9D4I 0 JRNL AUTH L.A.SCHWARTZ,J.O.NORMAN,S.HASAN,O.E.ADAMEK,E.DZUONG, JRNL AUTH 2 J.C.LOWENSTEIN,O.G.YOST,B.SANKARAN,K.J.MCLAUGHLIN JRNL TITL CARBOHYDRATE DEACETYLASE UNIQUE TO GUT MICROBE BACTEROIDES JRNL TITL 2 REVEALS ATYPICAL STRUCTURE. JRNL REF BIOCHEMISTRY V. 64 180 2025 JRNL REFN ISSN 0006-2960 JRNL PMID 39663570 JRNL DOI 10.1021/ACS.BIOCHEM.4C00519 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 80459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.480 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.5700 - 2.8300 1.00 5718 145 0.1526 0.1738 REMARK 3 2 2.8300 - 2.4700 1.00 5661 143 0.1652 0.2019 REMARK 3 3 2.4700 - 2.2500 1.00 5629 148 0.1663 0.2148 REMARK 3 4 2.2500 - 2.0900 1.00 5585 140 0.1612 0.1877 REMARK 3 5 2.0900 - 1.9600 1.00 5590 144 0.1631 0.1841 REMARK 3 6 1.9600 - 1.8600 0.99 5524 148 0.1739 0.2091 REMARK 3 7 1.8600 - 1.7800 1.00 5611 134 0.1777 0.2074 REMARK 3 8 1.7800 - 1.7100 1.00 5581 134 0.1946 0.2107 REMARK 3 9 1.7100 - 1.6600 1.00 5548 151 0.1840 0.2400 REMARK 3 10 1.6600 - 1.6000 1.00 5534 133 0.1827 0.2218 REMARK 3 11 1.6000 - 1.5600 0.99 5508 154 0.1901 0.2290 REMARK 3 12 1.5600 - 1.5200 0.99 5532 131 0.2387 0.2439 REMARK 3 13 1.5200 - 1.4800 0.99 5517 143 0.2934 0.3149 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.161 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.085 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3890 REMARK 3 ANGLE : 0.825 5273 REMARK 3 CHIRALITY : 0.079 553 REMARK 3 PLANARITY : 0.007 685 REMARK 3 DIHEDRAL : 13.201 1444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5010 2.3417 8.6945 REMARK 3 T TENSOR REMARK 3 T11: 0.0473 T22: 0.0498 REMARK 3 T33: 0.0575 T12: 0.0106 REMARK 3 T13: -0.0002 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.0023 L22: 0.0011 REMARK 3 L33: 0.0026 L12: 0.0021 REMARK 3 L13: 0.0014 L23: 0.0019 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: 0.0003 S13: 0.0025 REMARK 3 S21: -0.0002 S22: -0.0008 S23: 0.0017 REMARK 3 S31: 0.0028 S32: 0.0071 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8218 10.9645 9.5619 REMARK 3 T TENSOR REMARK 3 T11: -0.0330 T22: -0.0466 REMARK 3 T33: -0.0224 T12: 0.0487 REMARK 3 T13: 0.0181 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: -0.0013 L22: -0.0004 REMARK 3 L33: 0.0001 L12: -0.0029 REMARK 3 L13: -0.0005 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: -0.0076 S13: 0.0051 REMARK 3 S21: -0.0019 S22: 0.0062 S23: 0.0063 REMARK 3 S31: -0.0070 S32: -0.0116 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8658 -4.1530 -4.2536 REMARK 3 T TENSOR REMARK 3 T11: 0.0471 T22: 0.0454 REMARK 3 T33: 0.0381 T12: -0.0105 REMARK 3 T13: -0.0031 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.0022 L22: 0.0003 REMARK 3 L33: 0.0026 L12: -0.0002 REMARK 3 L13: 0.0021 L23: 0.0013 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: 0.0021 S13: -0.0122 REMARK 3 S21: -0.0092 S22: -0.0039 S23: 0.0056 REMARK 3 S31: -0.0020 S32: -0.0085 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 324 THROUGH 499 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6957 -2.3638 12.1255 REMARK 3 T TENSOR REMARK 3 T11: 0.0345 T22: 0.0386 REMARK 3 T33: 0.0394 T12: -0.0037 REMARK 3 T13: 0.0046 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.0046 L22: 0.0024 REMARK 3 L33: 0.0040 L12: -0.0032 REMARK 3 L13: 0.0030 L23: -0.0041 REMARK 3 S TENSOR REMARK 3 S11: -0.0099 S12: -0.0228 S13: 0.0013 REMARK 3 S21: 0.0038 S22: 0.0134 S23: -0.0025 REMARK 3 S31: 0.0026 S32: 0.0034 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D4I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287287. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80482 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 47.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.07220 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.97400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 NAOAC, 0.1 M TRIS PH 8.5, 15% REMARK 280 GLYCEROL, 25.5% PEG 4000, [PROTEIN]=16.5 MG/ML, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.47250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.58150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.52050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.58150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.47250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.52050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 GLY A 21 REMARK 465 CYS A 22 REMARK 465 ILE A 23 REMARK 465 ARG A 24 REMARK 465 LYS A 25 REMARK 465 LEU A 26 REMARK 465 ASN A 27 REMARK 465 LEU A 28 REMARK 465 TYR A 29 REMARK 465 GLN A 30 REMARK 465 GLY A 31 REMARK 465 ASP A 32 REMARK 465 LYS A 33 REMARK 465 ASP A 34 REMARK 465 GLU A 35 REMARK 465 ASP A 36 REMARK 465 GLU A 37 REMARK 465 ASN A 38 REMARK 465 LYS A 39 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 LYS A 381 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 166 60.77 -101.84 REMARK 500 GLN A 179 85.54 -160.64 REMARK 500 HIS A 213 -126.45 -142.47 REMARK 500 HIS A 337 -112.63 -102.08 REMARK 500 LYS A 441 -126.83 49.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1249 DISTANCE = 5.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 505 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 102 OD1 REMARK 620 2 HIS A 213 NE2 89.4 REMARK 620 3 GOL A 504 O1 93.1 177.5 REMARK 620 4 GOL A 504 O2 85.8 97.7 82.2 REMARK 620 5 GOL A 504 O3 172.7 96.0 81.5 88.7 REMARK 620 6 HOH A 663 O 99.3 88.7 91.2 171.9 85.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9D44 RELATED DB: PDB REMARK 900 9D44 CONTAINS THE SAME PROTEIN BOUND TO CO2+ REMARK 900 RELATED ID: 9D5T RELATED DB: PDB REMARK 900 9D5T CONTAINS THE SAME PROTEIN BOUND TO CU2+ REMARK 900 RELATED ID: 9D60 RELATED DB: PDB REMARK 900 9D60 CONTAINS THE SAME PROTEIN BOUND TO ZN2+ DBREF1 9D4I A 21 499 UNP A0AAN3A5R0_BACO1 DBREF2 9D4I A A0AAN3A5R0 21 499 SEQADV 9D4I GLY A 20 UNP A0AAN3A5R EXPRESSION TAG SEQRES 1 A 480 GLY GLY CYS ILE ARG LYS LEU ASN LEU TYR GLN GLY ASP SEQRES 2 A 480 LYS ASP GLU ASP GLU ASN LYS ASP ASN GLY LYS ARG ARG SEQRES 3 A 480 ASP VAL ILE CYS GLU THR GLU PHE ILE TYR PRO PHE GLY SEQRES 4 A 480 ASN GLU THR ALA ASP LYS GLU ILE GLU ILE THR ILE HIS SEQRES 5 A 480 LEU LYS ALA ASP ARG GLN VAL GLY TYR LEU TYR THR GLU SEQRES 6 A 480 ILE PRO THR LEU LYS TYR ASN LYS ASP TRP LEU PHE LEU SEQRES 7 A 480 MET THR GLN ASP ASP CYS MET HIS SER ALA PHE SER TYR SEQRES 8 A 480 THR TRP ALA ALA ILE HIS GLY LYS PRO LEU SER TYR ILE SEQRES 9 A 480 TYR TYR CYS ASP LEU ALA HIS LEU GLN ASN GLY ASP LEU SEQRES 10 A 480 PRO PRO ASP TYR TYR SER LEU GLY LYS THR LEU ALA THR SEQRES 11 A 480 THR ASN GLY THR GLY GLN GLU VAL ARG PHE SER PHE GLY SEQRES 12 A 480 THR THR VAL ALA ALA ASP ASP ASP LEU MET ASN THR GLN SEQRES 13 A 480 THR TRP VAL GLN ASN GLY TYR THR ARG ASP TYR PHE ARG SEQRES 14 A 480 PHE TYR LYS LYS THR MET LEU VAL TRP GLY ASN LEU GLN SEQRES 15 A 480 GLU MET MET ASN TYR GLY VAL SER ILE ALA PHE HIS ASP SEQRES 16 A 480 LEU ASN LEU PRO ASP GLU ASP LYS THR GLU ASP LYS LEU SEQRES 17 A 480 LEU ALA GLN PHE PRO VAL ALA GLN SER MET ILE ARG GLU SEQRES 18 A 480 LYS LEU ASN ASN ARG THR CYS LYS MET LEU ALA GLU PRO SEQRES 19 A 480 ASN GLY ASP LYS ASN TYR ILE LYS ALA ALA LEU ARG TYR SEQRES 20 A 480 ASP LYS ILE ARG THR LEU CYS ALA GLN SER GLY ALA THR SEQRES 21 A 480 LYS LEU TYR PRO PHE GLN GLU ASN GLY ASP ILE GLU GLN SEQRES 22 A 480 VAL VAL ILE GLU ARG ALA PHE TYR ASP PRO PRO GLU GLY SEQRES 23 A 480 SER GLY LEU THR ASN PRO ASP MET ILE LYS ALA ALA ILE SEQRES 24 A 480 LEU LYS GLU MET GLU ASN PRO LYS GLU GLU ARG ALA ALA SEQRES 25 A 480 ILE SER ILE GLY ALA HIS ASN THR ASP THR GLY TRP VAL SEQRES 26 A 480 ASN PHE LEU GLU TRP LEU ASN ASP THR TYR GLY ARG ASP SEQRES 27 A 480 GLY ASP ASP SER MET TRP PHE THR ASN GLN GLU GLU TYR SEQRES 28 A 480 TYR GLU TYR TYR TYR TYR ARG LEU HIS SER LYS PRO GLU SEQRES 29 A 480 ILE LYS GLN VAL ASN THR HIS THR TRP LYS LEU THR LEU SEQRES 30 A 480 ASN LEU ASN GLY GLU ASP SER ALA PRO PHE TYR TYR PRO SEQRES 31 A 480 SER VAL THR VAL ASN ILE PHE GLY LEU LYS MET GLY ASP SEQRES 32 A 480 ILE GLU SER ILE LYS SER ASN GLU ASP VAL THR GLY LEU SEQRES 33 A 480 SER TYR GLY ASP HIS LYS ASP PHE PHE MET LEU ASN ILE SEQRES 34 A 480 ASP CYS ARG LYS TYR LEU ALA GLU HIS ALA GLU ASN PHE SEQRES 35 A 480 VAL LYS ARG TYR GLU ALA ASN PRO THR ASP VAL SER ALA SEQRES 36 A 480 LYS ALA ASP ALA ASN TYR PHE VAL ASN MET LEU LYS ASP SEQRES 37 A 480 SER ASP LYS LYS THR GLU LEU LYS LYS ARG ILE GLU HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET NI A 505 1 HETNAM GOL GLYCEROL HETNAM NI NICKEL (II) ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 4(C3 H8 O3) FORMUL 6 NI NI 2+ FORMUL 7 HOH *649(H2 O) HELIX 1 AA1 PRO A 56 GLU A 60 5 5 HELIX 2 AA2 LEU A 88 LYS A 92 5 5 HELIX 3 AA3 MET A 104 TYR A 110 1 7 HELIX 4 AA4 TYR A 110 HIS A 116 1 7 HELIX 5 AA5 ASP A 127 GLY A 134 1 8 HELIX 6 AA6 ASP A 169 THR A 174 5 6 HELIX 7 AA7 TYR A 186 TYR A 190 5 5 HELIX 8 AA8 VAL A 196 ASN A 205 1 10 HELIX 9 AA9 PRO A 218 LYS A 222 5 5 HELIX 10 AB1 THR A 223 LEU A 242 1 20 HELIX 11 AB2 ASP A 256 LEU A 264 1 9 HELIX 12 AB3 THR A 309 GLU A 323 1 15 HELIX 13 AB4 ASN A 324 ARG A 329 5 6 HELIX 14 AB5 ASP A 340 GLY A 355 1 16 HELIX 15 AB6 ASN A 366 SER A 380 1 15 HELIX 16 AB7 LYS A 419 GLY A 421 5 3 HELIX 17 AB8 TYR A 453 ASN A 468 1 16 HELIX 18 AB9 ASP A 471 ASN A 483 1 13 HELIX 19 AC1 SER A 488 ILE A 498 1 11 SHEET 1 AA1 2 ARG A 45 VAL A 47 0 SHEET 2 AA1 2 THR A 176 VAL A 178 -1 O THR A 176 N VAL A 47 SHEET 1 AA2 4 GLU A 383 ASN A 388 0 SHEET 2 AA2 4 THR A 391 ASN A 399 -1 O THR A 391 N VAL A 387 SHEET 3 AA2 4 ASP A 63 LEU A 72 -1 N ILE A 70 O TRP A 392 SHEET 4 AA2 4 ILE A 423 SER A 428 -1 O SER A 425 N HIS A 71 SHEET 1 AA3 4 TYR A 82 GLU A 84 0 SHEET 2 AA3 4 SER A 410 PHE A 416 -1 O ASN A 414 N GLU A 84 SHEET 3 AA3 4 PHE A 443 ASP A 449 -1 O PHE A 444 N ILE A 415 SHEET 4 AA3 4 GLY A 434 HIS A 440 -1 N SER A 436 O ASN A 447 SHEET 1 AA4 4 SER A 209 PHE A 212 0 SHEET 2 AA4 4 GLY A 162 VAL A 165 1 N THR A 163 O SER A 209 SHEET 3 AA4 4 TRP A 94 GLN A 100 1 N GLN A 100 O GLY A 162 SHEET 4 AA4 4 ILE A 332 ALA A 336 1 O ILE A 334 N LEU A 97 SHEET 1 AA5 4 SER A 209 PHE A 212 0 SHEET 2 AA5 4 GLY A 162 VAL A 165 1 N THR A 163 O SER A 209 SHEET 3 AA5 4 TRP A 94 GLN A 100 1 N GLN A 100 O GLY A 162 SHEET 4 AA5 4 MET A 362 THR A 365 1 O TRP A 363 N PHE A 96 SHEET 1 AA6 2 ALA A 148 THR A 150 0 SHEET 2 AA6 2 GLU A 156 ARG A 158 -1 O VAL A 157 N THR A 149 SHEET 1 AA7 3 MET A 249 ALA A 251 0 SHEET 2 AA7 3 THR A 271 ALA A 274 1 O CYS A 273 N LEU A 250 SHEET 3 AA7 3 VAL A 293 GLU A 296 1 O ILE A 295 N LEU A 272 LINK OD1 ASP A 102 NI NI A 505 1555 1555 2.09 LINK NE2 HIS A 213 NI NI A 505 1555 1555 2.12 LINK O1 GOL A 504 NI NI A 505 1555 1555 2.11 LINK O2 GOL A 504 NI NI A 505 1555 1555 2.05 LINK O3 GOL A 504 NI NI A 505 1555 1555 2.04 LINK NI NI A 505 O HOH A 663 1555 1555 2.12 CRYST1 68.945 73.041 95.163 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010508 0.00000 CONECT 531 3798 CONECT 1437 3798 CONECT 3774 3775 3776 CONECT 3775 3774 CONECT 3776 3774 3777 3778 CONECT 3777 3776 CONECT 3778 3776 3779 CONECT 3779 3778 CONECT 3780 3781 3782 CONECT 3781 3780 CONECT 3782 3780 3783 3784 CONECT 3783 3782 CONECT 3784 3782 3785 CONECT 3785 3784 CONECT 3786 3787 3788 CONECT 3787 3786 CONECT 3788 3786 3789 3790 CONECT 3789 3788 CONECT 3790 3788 3791 CONECT 3791 3790 CONECT 3792 3793 3794 CONECT 3793 3792 3798 CONECT 3794 3792 3795 3796 CONECT 3795 3794 3798 CONECT 3796 3794 3797 CONECT 3797 3796 3798 CONECT 3798 531 1437 3793 3795 CONECT 3798 3797 3861 CONECT 3861 3798 MASTER 353 0 5 19 23 0 0 6 4419 1 29 37 END