HEADER IMMUNE SYSTEM 13-AUG-24 9D4Z TITLE CRYOEM STRUCTURE OF PAR1 WITH ENDOGENOUS TETHERED LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 3 BETA-1; COMPND 4 CHAIN: B; COMPND 5 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 9 GAMMA-2; COMPND 10 CHAIN: G; COMPND 11 SYNONYM: G GAMMA-I; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PROTEINASE-ACTIVATED RECEPTOR 1; COMPND 15 CHAIN: R; COMPND 16 SYNONYM: PAR-1,COAGULATION FACTOR II RECEPTOR,THROMBIN RECEPTOR; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: SCFV16; COMPND 20 CHAIN: E; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(Q) SUBUNIT ALPHA COMPND 24 CHIMERA; COMPND 25 CHAIN: A; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GNB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: GNG2; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: F2R, CF2R, PAR1, TR; SOURCE 22 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 23 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 27 ORGANISM_COMMON: MOUSE; SOURCE 28 ORGANISM_TAXID: 10090; SOURCE 29 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 30 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 32 MOL_ID: 5; SOURCE 33 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 34 ORGANISM_COMMON: HUMAN; SOURCE 35 ORGANISM_TAXID: 9606; SOURCE 36 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 37 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 38 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS PAR2, ENDOGENOUS LIGAND., IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR X.LYU,Z.LYU,A.P.MCGRATH,Y.KANG REVDAT 2 14-MAY-25 9D4Z 1 REMARK REVDAT 1 07-MAY-25 9D4Z 0 JRNL AUTH Z.LYU,X.LYU,A.G.MALYUTIN,G.XIA,D.CARNEY,V.M.ALVES,M.FALK, JRNL AUTH 2 N.ARORA,H.ZOU,A.P.MCGRATH,Y.KANG JRNL TITL STRUCTURAL BASIS FOR THE ACTIVATION OF PROTEINASE-ACTIVATED JRNL TITL 2 RECEPTORS PAR1 AND PAR2. JRNL REF NAT COMMUN V. 16 3931 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40287415 JRNL DOI 10.1038/S41467-025-59138-X REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.740 REMARK 3 NUMBER OF PARTICLES : 190455 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9D4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287114. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF PAR1 WITH G PROTEINS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, R, E, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 ASP B 5 REMARK 465 GLN B 6 REMARK 465 LEU B 7 REMARK 465 ARG B 8 REMARK 465 GLN B 9 REMARK 465 GLU B 10 REMARK 465 ALA B 11 REMARK 465 GLU B 12 REMARK 465 GLN B 13 REMARK 465 LEU B 14 REMARK 465 LYS B 15 REMARK 465 ASN B 16 REMARK 465 GLN B 17 REMARK 465 ILE B 18 REMARK 465 ARG B 19 REMARK 465 ASP B 20 REMARK 465 ALA B 21 REMARK 465 ARG B 22 REMARK 465 LYS B 23 REMARK 465 ALA B 24 REMARK 465 CYS B 25 REMARK 465 ALA B 26 REMARK 465 ASP B 27 REMARK 465 ALA B 28 REMARK 465 THR B 29 REMARK 465 LEU B 30 REMARK 465 SER B 31 REMARK 465 GLN B 32 REMARK 465 ILE B 33 REMARK 465 THR B 34 REMARK 465 ASN B 35 REMARK 465 ASN B 36 REMARK 465 ILE B 37 REMARK 465 ASN G 5 REMARK 465 THR G 6 REMARK 465 ALA G 7 REMARK 465 SER G 8 REMARK 465 ILE G 9 REMARK 465 ALA G 10 REMARK 465 GLN G 11 REMARK 465 ALA G 12 REMARK 465 ARG G 13 REMARK 465 LYS G 14 REMARK 465 LEU G 15 REMARK 465 VAL G 16 REMARK 465 GLU G 17 REMARK 465 GLN G 18 REMARK 465 LEU G 19 REMARK 465 LYS G 20 REMARK 465 MET G 21 REMARK 465 GLU G 22 REMARK 465 ALA G 23 REMARK 465 ASN G 24 REMARK 465 ILE G 25 REMARK 465 ASP G 26 REMARK 465 ARG G 27 REMARK 465 ILE G 28 REMARK 465 LYS G 29 REMARK 465 VAL G 30 REMARK 465 SER G 31 REMARK 465 LYS G 32 REMARK 465 ALA G 33 REMARK 465 GLU G 58 REMARK 465 ASN G 59 REMARK 465 PRO G 60 REMARK 465 PHE G 61 REMARK 465 ARG G 62 REMARK 465 GLU G 63 REMARK 465 PRO R 48 REMARK 465 ASN R 49 REMARK 465 ASP R 50 REMARK 465 LYS R 51 REMARK 465 TYR R 52 REMARK 465 GLU R 53 REMARK 465 PRO R 54 REMARK 465 PHE R 55 REMARK 465 TRP R 56 REMARK 465 GLU R 57 REMARK 465 ASP R 58 REMARK 465 GLU R 59 REMARK 465 GLU R 60 REMARK 465 LYS R 61 REMARK 465 ASN R 62 REMARK 465 GLU R 63 REMARK 465 SER R 64 REMARK 465 GLY R 65 REMARK 465 LEU R 66 REMARK 465 THR R 67 REMARK 465 GLU R 68 REMARK 465 TYR R 69 REMARK 465 ARG R 70 REMARK 465 LEU R 71 REMARK 465 VAL R 72 REMARK 465 SER R 73 REMARK 465 ILE R 74 REMARK 465 ASN R 75 REMARK 465 LYS R 76 REMARK 465 SER R 77 REMARK 465 SER R 78 REMARK 465 PRO R 79 REMARK 465 LEU R 80 REMARK 465 GLN R 81 REMARK 465 LYS R 82 REMARK 465 GLN R 83 REMARK 465 LEU R 84 REMARK 465 PRO R 85 REMARK 465 GLU R 377 REMARK 465 CYS R 378 REMARK 465 GLN R 379 REMARK 465 ARG R 380 REMARK 465 TYR R 381 REMARK 465 VAL R 382 REMARK 465 TYR R 383 REMARK 465 SER R 384 REMARK 465 ILE R 385 REMARK 465 LEU R 386 REMARK 465 CYS R 387 REMARK 465 CYS R 388 REMARK 465 LYS R 389 REMARK 465 GLU R 390 REMARK 465 SER R 391 REMARK 465 SER R 392 REMARK 465 ASP R 393 REMARK 465 PRO R 394 REMARK 465 SER R 395 REMARK 465 SER R 396 REMARK 465 TYR R 397 REMARK 465 ASN R 398 REMARK 465 SER R 399 REMARK 465 SER R 400 REMARK 465 GLY R 401 REMARK 465 GLN R 402 REMARK 465 LEU R 403 REMARK 465 MET R 404 REMARK 465 ALA R 405 REMARK 465 SER R 406 REMARK 465 LYS R 407 REMARK 465 MET R 408 REMARK 465 ASP R 409 REMARK 465 THR R 410 REMARK 465 CYS R 411 REMARK 465 SER R 412 REMARK 465 SER R 413 REMARK 465 ASN R 414 REMARK 465 LEU R 415 REMARK 465 ASN R 416 REMARK 465 ASN R 417 REMARK 465 SER R 418 REMARK 465 ILE R 419 REMARK 465 TYR R 420 REMARK 465 LYS R 421 REMARK 465 LYS R 422 REMARK 465 LEU R 423 REMARK 465 LEU R 424 REMARK 465 THR R 425 REMARK 465 SER E 121 REMARK 465 GLY E 122 REMARK 465 GLY E 123 REMARK 465 GLY E 124 REMARK 465 GLY E 125 REMARK 465 SER E 126 REMARK 465 GLY E 127 REMARK 465 GLY E 128 REMARK 465 GLY E 129 REMARK 465 GLY E 130 REMARK 465 SER E 131 REMARK 465 GLY E 132 REMARK 465 GLY E 133 REMARK 465 GLY E 134 REMARK 465 GLY E 135 REMARK 465 SER E 136 REMARK 465 LYS E 248 REMARK 465 ALA E 249 REMARK 465 ALA E 250 REMARK 465 ALA E 251 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 THR A 4 REMARK 465 LEU A 5 REMARK 465 LYS A 57 REMARK 465 GLN A 58 REMARK 465 MET A 59 REMARK 465 ARG A 60 REMARK 465 ILE A 61 REMARK 465 ILE A 62 REMARK 465 HIS A 63 REMARK 465 GLY A 64 REMARK 465 SER A 65 REMARK 465 GLY A 66 REMARK 465 TYR A 67 REMARK 465 SER A 68 REMARK 465 ASP A 69 REMARK 465 GLU A 70 REMARK 465 ASP A 71 REMARK 465 LYS A 72 REMARK 465 ARG A 73 REMARK 465 GLY A 74 REMARK 465 PHE A 75 REMARK 465 THR A 76 REMARK 465 LYS A 77 REMARK 465 LEU A 78 REMARK 465 VAL A 79 REMARK 465 TYR A 80 REMARK 465 GLN A 81 REMARK 465 ASN A 82 REMARK 465 ILE A 83 REMARK 465 PHE A 84 REMARK 465 THR A 85 REMARK 465 ALA A 86 REMARK 465 MET A 87 REMARK 465 GLN A 88 REMARK 465 ALA A 89 REMARK 465 MET A 90 REMARK 465 ILE A 91 REMARK 465 ARG A 92 REMARK 465 ALA A 93 REMARK 465 MET A 94 REMARK 465 ASP A 95 REMARK 465 THR A 96 REMARK 465 LEU A 97 REMARK 465 LYS A 98 REMARK 465 ILE A 99 REMARK 465 PRO A 100 REMARK 465 TYR A 101 REMARK 465 LYS A 102 REMARK 465 TYR A 103 REMARK 465 GLU A 104 REMARK 465 HIS A 105 REMARK 465 ASN A 106 REMARK 465 LYS A 107 REMARK 465 ALA A 108 REMARK 465 HIS A 109 REMARK 465 ALA A 110 REMARK 465 GLN A 111 REMARK 465 LEU A 112 REMARK 465 VAL A 113 REMARK 465 ARG A 114 REMARK 465 GLU A 115 REMARK 465 VAL A 116 REMARK 465 ASP A 117 REMARK 465 VAL A 118 REMARK 465 GLU A 119 REMARK 465 LYS A 120 REMARK 465 VAL A 121 REMARK 465 SER A 122 REMARK 465 ALA A 123 REMARK 465 PHE A 124 REMARK 465 GLU A 125 REMARK 465 ASN A 126 REMARK 465 PRO A 127 REMARK 465 TYR A 128 REMARK 465 VAL A 129 REMARK 465 ASP A 130 REMARK 465 ALA A 131 REMARK 465 ILE A 132 REMARK 465 LYS A 133 REMARK 465 SER A 134 REMARK 465 LEU A 135 REMARK 465 TRP A 136 REMARK 465 ASN A 137 REMARK 465 ASP A 138 REMARK 465 PRO A 139 REMARK 465 GLY A 140 REMARK 465 ILE A 141 REMARK 465 GLN A 142 REMARK 465 GLU A 143 REMARK 465 CYS A 144 REMARK 465 TYR A 145 REMARK 465 ASP A 146 REMARK 465 ARG A 147 REMARK 465 ARG A 148 REMARK 465 ARG A 149 REMARK 465 GLU A 150 REMARK 465 TYR A 151 REMARK 465 GLN A 152 REMARK 465 LEU A 153 REMARK 465 SER A 154 REMARK 465 ASP A 155 REMARK 465 SER A 156 REMARK 465 THR A 157 REMARK 465 LYS A 158 REMARK 465 TYR A 159 REMARK 465 TYR A 160 REMARK 465 LEU A 161 REMARK 465 ASN A 162 REMARK 465 ASP A 163 REMARK 465 LEU A 164 REMARK 465 ASP A 165 REMARK 465 ARG A 166 REMARK 465 VAL A 167 REMARK 465 ALA A 168 REMARK 465 ASP A 169 REMARK 465 PRO A 170 REMARK 465 ALA A 171 REMARK 465 TYR A 172 REMARK 465 LEU A 173 REMARK 465 PRO A 174 REMARK 465 THR A 175 REMARK 465 GLN A 176 REMARK 465 GLN A 177 REMARK 465 ASP A 178 REMARK 465 VAL A 179 REMARK 465 LEU A 180 REMARK 465 ARG A 181 REMARK 465 VAL A 182 REMARK 465 ARG A 183 REMARK 465 VAL A 184 REMARK 465 PRO A 185 REMARK 465 THR A 186 REMARK 465 GLY A 208 REMARK 465 GLN A 209 REMARK 465 ARG A 210 REMARK 465 SER A 211 REMARK 465 GLU A 212 REMARK 465 ARG A 213 REMARK 465 ASP A 295 REMARK 465 ALA A 296 REMARK 465 THR A 297 REMARK 465 PRO A 298 REMARK 465 GLU A 299 REMARK 465 PRO A 300 REMARK 465 GLY A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 76 CG OD1 OD2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 CYS B 103 SG REMARK 470 CYS B 114 SG REMARK 470 CYS B 121 SG REMARK 470 CYS B 149 SG REMARK 470 ASN B 268 CG OD1 ND2 REMARK 470 ILE B 269 CG1 CG2 CD1 REMARK 470 PHE B 292 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG E 67 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 220 CG CD OE1 OE2 REMARK 470 GLU E 246 CG CD OE1 OE2 REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 GLU A 286 CG CD OE1 OE2 REMARK 470 ARG A 308 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 328 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 361 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 362 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 127 32.73 -96.22 REMARK 500 ASP B 154 -9.35 72.42 REMARK 500 THR B 196 15.83 55.50 REMARK 500 ASP B 205 1.08 -67.37 REMARK 500 SER B 227 -168.03 -161.14 REMARK 500 PRO B 236 47.59 -78.03 REMARK 500 ALA B 248 36.25 72.26 REMARK 500 LEU G 50 -8.78 73.54 REMARK 500 MET R 131 -167.62 -79.30 REMARK 500 PHE E 108 36.39 70.06 REMARK 500 LEU E 188 -60.30 -94.19 REMARK 500 ARG E 191 -113.37 59.15 REMARK 500 LEU E 219 130.53 -36.28 REMARK 500 PHE A 220 30.62 -92.00 REMARK 500 ASP A 326 19.99 59.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-46571 RELATED DB: EMDB REMARK 900 CRYOEM STRUCTURE OF PAR1 WITH ENDOGENOUS TETHERED LIGAND. DBREF 9D4Z B 2 340 UNP P62873 GBB1_HUMAN 2 340 DBREF 9D4Z G 5 63 UNP P59768 GBG2_HUMAN 5 63 DBREF 9D4Z R 42 425 UNP P25116 PAR1_HUMAN 42 425 DBREF 9D4Z E 1 251 PDB 9D4Z 9D4Z 1 251 DBREF 9D4Z A 1 366 PDB 9D4Z 9D4Z 1 366 SEQRES 1 B 339 SER GLU LEU ASP GLN LEU ARG GLN GLU ALA GLU GLN LEU SEQRES 2 B 339 LYS ASN GLN ILE ARG ASP ALA ARG LYS ALA CYS ALA ASP SEQRES 3 B 339 ALA THR LEU SER GLN ILE THR ASN ASN ILE ASP PRO VAL SEQRES 4 B 339 GLY ARG ILE GLN MET ARG THR ARG ARG THR LEU ARG GLY SEQRES 5 B 339 HIS LEU ALA LYS ILE TYR ALA MET HIS TRP GLY THR ASP SEQRES 6 B 339 SER ARG LEU LEU VAL SER ALA SER GLN ASP GLY LYS LEU SEQRES 7 B 339 ILE ILE TRP ASP SER TYR THR THR ASN LYS VAL HIS ALA SEQRES 8 B 339 ILE PRO LEU ARG SER SER TRP VAL MET THR CYS ALA TYR SEQRES 9 B 339 ALA PRO SER GLY ASN TYR VAL ALA CYS GLY GLY LEU ASP SEQRES 10 B 339 ASN ILE CYS SER ILE TYR ASN LEU LYS THR ARG GLU GLY SEQRES 11 B 339 ASN VAL ARG VAL SER ARG GLU LEU ALA GLY HIS THR GLY SEQRES 12 B 339 TYR LEU SER CYS CYS ARG PHE LEU ASP ASP ASN GLN ILE SEQRES 13 B 339 VAL THR SER SER GLY ASP THR THR CYS ALA LEU TRP ASP SEQRES 14 B 339 ILE GLU THR GLY GLN GLN THR THR THR PHE THR GLY HIS SEQRES 15 B 339 THR GLY ASP VAL MET SER LEU SER LEU ALA PRO ASP THR SEQRES 16 B 339 ARG LEU PHE VAL SER GLY ALA CYS ASP ALA SER ALA LYS SEQRES 17 B 339 LEU TRP ASP VAL ARG GLU GLY MET CYS ARG GLN THR PHE SEQRES 18 B 339 THR GLY HIS GLU SER ASP ILE ASN ALA ILE CYS PHE PHE SEQRES 19 B 339 PRO ASN GLY ASN ALA PHE ALA THR GLY SER ASP ASP ALA SEQRES 20 B 339 THR CYS ARG LEU PHE ASP LEU ARG ALA ASP GLN GLU LEU SEQRES 21 B 339 MET THR TYR SER HIS ASP ASN ILE ILE CYS GLY ILE THR SEQRES 22 B 339 SER VAL SER PHE SER LYS SER GLY ARG LEU LEU LEU ALA SEQRES 23 B 339 GLY TYR ASP ASP PHE ASN CYS ASN VAL TRP ASP ALA LEU SEQRES 24 B 339 LYS ALA ASP ARG ALA GLY VAL LEU ALA GLY HIS ASP ASN SEQRES 25 B 339 ARG VAL SER CYS LEU GLY VAL THR ASP ASP GLY MET ALA SEQRES 26 B 339 VAL ALA THR GLY SER TRP ASP SER PHE LEU LYS ILE TRP SEQRES 27 B 339 ASN SEQRES 1 G 59 ASN THR ALA SER ILE ALA GLN ALA ARG LYS LEU VAL GLU SEQRES 2 G 59 GLN LEU LYS MET GLU ALA ASN ILE ASP ARG ILE LYS VAL SEQRES 3 G 59 SER LYS ALA ALA ALA ASP LEU MET ALA TYR CYS GLU ALA SEQRES 4 G 59 HIS ALA LYS GLU ASP PRO LEU LEU THR PRO VAL PRO ALA SEQRES 5 G 59 SER GLU ASN PRO PHE ARG GLU SEQRES 1 R 384 SER PHE LEU LEU ARG ASN PRO ASN ASP LYS TYR GLU PRO SEQRES 2 R 384 PHE TRP GLU ASP GLU GLU LYS ASN GLU SER GLY LEU THR SEQRES 3 R 384 GLU TYR ARG LEU VAL SER ILE ASN LYS SER SER PRO LEU SEQRES 4 R 384 GLN LYS GLN LEU PRO ALA PHE ILE SER GLU ASP ALA SER SEQRES 5 R 384 GLY TYR LEU THR SER SER TRP LEU THR LEU PHE VAL PRO SEQRES 6 R 384 SER VAL TYR THR GLY VAL PHE VAL VAL SER LEU PRO LEU SEQRES 7 R 384 ASN ILE MET ALA ILE VAL VAL PHE ILE LEU LYS MET LYS SEQRES 8 R 384 VAL LYS LYS PRO ALA VAL VAL TYR MET LEU HIS LEU ALA SEQRES 9 R 384 THR ALA ASP VAL LEU PHE VAL SER VAL LEU PRO PHE LYS SEQRES 10 R 384 ILE SER TYR TYR PHE SER GLY SER ASP TRP GLN PHE GLY SEQRES 11 R 384 SER GLU LEU CYS ARG PHE VAL THR ALA ALA PHE TYR CYS SEQRES 12 R 384 ASN MET TYR ALA SER ILE LEU LEU MET THR VAL ILE SER SEQRES 13 R 384 ILE ASP ARG PHE LEU ALA VAL VAL TYR PRO MET GLN SER SEQRES 14 R 384 LEU SER TRP ARG THR LEU GLY ARG ALA SER PHE THR CYS SEQRES 15 R 384 LEU ALA ILE TRP ALA LEU ALA ILE ALA GLY VAL VAL PRO SEQRES 16 R 384 LEU LEU LEU LYS GLU GLN THR ILE GLN VAL PRO GLY LEU SEQRES 17 R 384 ASN ILE THR THR CYS HIS ASP VAL LEU ASN GLU THR LEU SEQRES 18 R 384 LEU GLU GLY TYR TYR ALA TYR TYR PHE SER ALA PHE SER SEQRES 19 R 384 ALA VAL PHE PHE PHE VAL PRO LEU ILE ILE SER THR VAL SEQRES 20 R 384 CYS TYR VAL SER ILE ILE ARG CYS LEU SER SER SER ALA SEQRES 21 R 384 VAL ALA ASN ARG SER LYS LYS SER ARG ALA LEU PHE LEU SEQRES 22 R 384 SER ALA ALA VAL PHE CYS ILE PHE ILE ILE CYS PHE GLY SEQRES 23 R 384 PRO THR ASN VAL LEU LEU ILE ALA HIS TYR SER PHE LEU SEQRES 24 R 384 SER HIS THR SER THR THR GLU ALA ALA TYR PHE ALA TYR SEQRES 25 R 384 LEU LEU CYS VAL CYS VAL SER SER ILE SER CYS CYS ILE SEQRES 26 R 384 ASP PRO LEU ILE TYR TYR TYR ALA SER SER GLU CYS GLN SEQRES 27 R 384 ARG TYR VAL TYR SER ILE LEU CYS CYS LYS GLU SER SER SEQRES 28 R 384 ASP PRO SER SER TYR ASN SER SER GLY GLN LEU MET ALA SEQRES 29 R 384 SER LYS MET ASP THR CYS SER SER ASN LEU ASN ASN SER SEQRES 30 R 384 ILE TYR LYS LYS LEU LEU THR SEQRES 1 E 251 ASP VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 251 PRO GLY GLY SER ARG LYS LEU SER CYS SER ALA SER GLY SEQRES 3 E 251 PHE ALA PHE SER SER PHE GLY MET HIS TRP VAL ARG GLN SEQRES 4 E 251 ALA PRO GLU LYS GLY LEU GLU TRP VAL ALA TYR ILE SER SEQRES 5 E 251 SER GLY SER GLY THR ILE TYR TYR ALA ASP THR VAL LYS SEQRES 6 E 251 GLY ARG PHE THR ILE SER ARG ASP ASP PRO LYS ASN THR SEQRES 7 E 251 LEU PHE LEU GLN MET THR SER LEU ARG SER GLU ASP THR SEQRES 8 E 251 ALA MET TYR TYR CYS VAL ARG SER ILE TYR TYR TYR GLY SEQRES 9 E 251 SER SER PRO PHE ASP PHE TRP GLY GLN GLY THR THR LEU SEQRES 10 E 251 THR VAL SER SER GLY GLY GLY GLY SER GLY GLY GLY GLY SEQRES 11 E 251 SER GLY GLY GLY GLY SER ASP ILE VAL MET THR GLN ALA SEQRES 12 E 251 THR SER SER VAL PRO VAL THR PRO GLY GLU SER VAL SER SEQRES 13 E 251 ILE SER CYS ARG SER SER LYS SER LEU LEU HIS SER ASN SEQRES 14 E 251 GLY ASN THR TYR LEU TYR TRP PHE LEU GLN ARG PRO GLY SEQRES 15 E 251 GLN SER PRO GLN LEU LEU ILE TYR ARG MET SER ASN LEU SEQRES 16 E 251 ALA SER GLY VAL PRO ASP ARG PHE SER GLY SER GLY SER SEQRES 17 E 251 GLY THR ALA PHE THR LEU THR ILE SER ARG LEU GLU ALA SEQRES 18 E 251 GLU ASP VAL GLY VAL TYR TYR CYS MET GLN HIS LEU GLU SEQRES 19 E 251 TYR PRO LEU THR PHE GLY ALA GLY THR LYS LEU GLU LEU SEQRES 20 E 251 LYS ALA ALA ALA SEQRES 1 A 360 MET GLY CYS THR LEU SER ALA GLU ASP LYS ALA ALA VAL SEQRES 2 A 360 GLU ARG SER LYS MET ILE ASP ARG ASN LEU ARG GLU ASP SEQRES 3 A 360 GLY GLU LYS ALA ARG ARG GLU LEU LYS LEU LEU LEU LEU SEQRES 4 A 360 GLY THR GLY GLU SER GLY LYS SER THR PHE ILE LYS GLN SEQRES 5 A 360 MET ARG ILE ILE HIS GLY SER GLY TYR SER ASP GLU ASP SEQRES 6 A 360 LYS ARG GLY PHE THR LYS LEU VAL TYR GLN ASN ILE PHE SEQRES 7 A 360 THR ALA MET GLN ALA MET ILE ARG ALA MET ASP THR LEU SEQRES 8 A 360 LYS ILE PRO TYR LYS TYR GLU HIS ASN LYS ALA HIS ALA SEQRES 9 A 360 GLN LEU VAL ARG GLU VAL ASP VAL GLU LYS VAL SER ALA SEQRES 10 A 360 PHE GLU ASN PRO TYR VAL ASP ALA ILE LYS SER LEU TRP SEQRES 11 A 360 ASN ASP PRO GLY ILE GLN GLU CYS TYR ASP ARG ARG ARG SEQRES 12 A 360 GLU TYR GLN LEU SER ASP SER THR LYS TYR TYR LEU ASN SEQRES 13 A 360 ASP LEU ASP ARG VAL ALA ASP PRO ALA TYR LEU PRO THR SEQRES 14 A 360 GLN GLN ASP VAL LEU ARG VAL ARG VAL PRO THR THR GLY SEQRES 15 A 360 ILE ILE GLU TYR PRO PHE ASP LEU GLN LYS VAL ASN PHE SEQRES 16 A 360 HIS MET PHE ASP VAL GLY GLY GLN ARG SER GLU ARG ARG SEQRES 17 A 360 LYS TRP ILE GLN CYS PHE ASN ASP VAL THR ALA ILE ILE SEQRES 18 A 360 PHE VAL VAL ASP SER SER ASP TYR ASN ARG LEU GLN GLU SEQRES 19 A 360 ALA LEU ASN ASP PHE LYS SER ILE TRP ASN ASN ARG TRP SEQRES 20 A 360 LEU ARG THR ILE SER VAL ILE LEU PHE LEU ASN LYS GLN SEQRES 21 A 360 ASP LEU LEU ALA GLU LYS VAL LEU ALA GLY LYS SER LYS SEQRES 22 A 360 ILE GLU ASP TYR PHE PRO GLU PHE ALA ARG TYR THR THR SEQRES 23 A 360 PRO GLU ASP ALA THR PRO GLU PRO GLY GLU ASP PRO ARG SEQRES 24 A 360 VAL THR ARG ALA LYS TYR PHE ILE ARG LYS GLU PHE VAL SEQRES 25 A 360 ASP ILE SER THR ALA SER GLY ASP GLY ARG HIS ILE CYS SEQRES 26 A 360 TYR PRO HIS PHE THR CYS ALA VAL ASP THR GLU ASN ALA SEQRES 27 A 360 ARG ARG ILE PHE ASN ASP CYS LYS ASP ILE ILE LEU GLN SEQRES 28 A 360 MET ASN LEU ARG GLU TYR ASN LEU VAL HELIX 1 AA1 ARG B 256 ASP B 258 5 3 HELIX 2 AA2 ALA G 35 HIS G 44 1 10 HELIX 3 AA3 ALA G 45 ASP G 48 5 4 HELIX 4 AA4 SER R 89 THR R 97 1 9 HELIX 5 AA5 SER R 98 LYS R 130 1 33 HELIX 6 AA6 LYS R 135 VAL R 154 1 20 HELIX 7 AA7 VAL R 154 SER R 164 1 11 HELIX 8 AA8 GLY R 171 TYR R 206 1 36 HELIX 9 AA9 TYR R 206 ARG R 214 1 9 HELIX 10 AB1 THR R 215 VAL R 234 1 20 HELIX 11 AB2 VAL R 234 LYS R 240 1 7 HELIX 12 AB3 GLU R 260 GLY R 265 1 6 HELIX 13 AB4 GLY R 265 PHE R 279 1 15 HELIX 14 AB5 PHE R 279 SER R 299 1 21 HELIX 15 AB6 SER R 299 ASN R 304 1 6 HELIX 16 AB7 LYS R 308 PHE R 339 1 32 HELIX 17 AB8 HIS R 342 SER R 360 1 19 HELIX 18 AB9 ILE R 362 TYR R 372 1 11 HELIX 19 AC1 ALA E 28 PHE E 32 5 5 HELIX 20 AC2 SER E 53 GLY E 56 5 4 HELIX 21 AC3 ASP E 74 LYS E 76 5 3 HELIX 22 AC4 ARG E 87 THR E 91 5 5 HELIX 23 AC5 ALA A 7 ARG A 38 1 26 HELIX 24 AC6 GLY A 51 PHE A 55 5 5 HELIX 25 AC7 LYS A 215 ASN A 221 5 7 HELIX 26 AC8 ASP A 234 ASN A 250 1 17 HELIX 27 AC9 ASN A 251 ARG A 255 5 5 HELIX 28 AD1 LYS A 265 GLY A 276 1 12 HELIX 29 AD2 LYS A 279 PHE A 284 1 6 HELIX 30 AD3 PRO A 285 TYR A 290 5 6 HELIX 31 AD4 ASP A 303 GLY A 325 1 23 HELIX 32 AD5 GLU A 342 TYR A 363 1 22 SHEET 1 AA1 4 THR B 47 LEU B 51 0 SHEET 2 AA1 4 LEU B 336 TRP B 339 -1 O ILE B 338 N ARG B 48 SHEET 3 AA1 4 VAL B 327 SER B 331 -1 N VAL B 327 O TRP B 339 SHEET 4 AA1 4 VAL B 315 VAL B 320 -1 N GLY B 319 O ALA B 328 SHEET 1 AA2 4 ALA B 60 TRP B 63 0 SHEET 2 AA2 4 LEU B 69 ALA B 73 -1 O VAL B 71 N HIS B 62 SHEET 3 AA2 4 LYS B 78 ASP B 83 -1 O TRP B 82 N LEU B 70 SHEET 4 AA2 4 LYS B 89 PRO B 94 -1 O VAL B 90 N ILE B 81 SHEET 1 AA3 4 VAL B 100 TYR B 105 0 SHEET 2 AA3 4 TYR B 111 GLY B 116 -1 O GLY B 115 N MET B 101 SHEET 3 AA3 4 ILE B 120 ASN B 125 -1 O TYR B 124 N VAL B 112 SHEET 4 AA3 4 ARG B 134 ALA B 140 -1 O ARG B 134 N ASN B 125 SHEET 1 AA4 4 LEU B 146 PHE B 151 0 SHEET 2 AA4 4 GLN B 156 SER B 161 -1 O VAL B 158 N ARG B 150 SHEET 3 AA4 4 CYS B 166 ASP B 170 -1 O ALA B 167 N THR B 159 SHEET 4 AA4 4 GLN B 175 PHE B 180 -1 O PHE B 180 N CYS B 166 SHEET 1 AA5 4 VAL B 187 LEU B 192 0 SHEET 2 AA5 4 LEU B 198 ALA B 203 -1 O VAL B 200 N SER B 191 SHEET 3 AA5 4 SER B 207 ASP B 212 -1 O TRP B 211 N PHE B 199 SHEET 4 AA5 4 CYS B 218 THR B 223 -1 O PHE B 222 N ALA B 208 SHEET 1 AA6 4 ILE B 229 PHE B 234 0 SHEET 2 AA6 4 ALA B 240 SER B 245 -1 O GLY B 244 N ALA B 231 SHEET 3 AA6 4 CYS B 250 ASP B 254 -1 O ARG B 251 N THR B 243 SHEET 4 AA6 4 GLU B 260 TYR B 264 -1 O LEU B 261 N LEU B 252 SHEET 1 AA7 4 ILE B 273 PHE B 278 0 SHEET 2 AA7 4 LEU B 284 TYR B 289 -1 O GLY B 288 N SER B 275 SHEET 3 AA7 4 CYS B 294 ASP B 298 -1 O TRP B 297 N LEU B 285 SHEET 4 AA7 4 ARG B 304 LEU B 308 -1 O ALA B 305 N VAL B 296 SHEET 1 AA8 2 PHE R 43 LEU R 45 0 SHEET 2 AA8 2 VAL R 257 ASN R 259 1 O LEU R 258 N PHE R 43 SHEET 1 AA9 2 ILE R 244 GLN R 245 0 SHEET 2 AA9 2 THR R 252 THR R 253 -1 O THR R 253 N ILE R 244 SHEET 1 AB1 4 GLN E 3 SER E 7 0 SHEET 2 AB1 4 SER E 17 SER E 25 -1 O SER E 23 N VAL E 5 SHEET 3 AB1 4 THR E 78 THR E 84 -1 O LEU E 81 N LEU E 20 SHEET 4 AB1 4 PHE E 68 ASP E 73 -1 N THR E 69 O GLN E 82 SHEET 1 AB2 6 GLY E 10 VAL E 12 0 SHEET 2 AB2 6 THR E 115 VAL E 119 1 O THR E 116 N GLY E 10 SHEET 3 AB2 6 ALA E 92 SER E 99 -1 N TYR E 94 O THR E 115 SHEET 4 AB2 6 GLY E 33 GLN E 39 -1 N GLN E 39 O MET E 93 SHEET 5 AB2 6 LEU E 45 ILE E 51 -1 O ILE E 51 N MET E 34 SHEET 6 AB2 6 ILE E 58 TYR E 60 -1 O TYR E 59 N TYR E 50 SHEET 1 AB3 3 VAL E 155 ARG E 160 0 SHEET 2 AB3 3 ALA E 211 ILE E 216 -1 O LEU E 214 N ILE E 157 SHEET 3 AB3 3 PHE E 203 SER E 208 -1 N SER E 204 O THR E 215 SHEET 1 AB4 5 ASN E 194 LEU E 195 0 SHEET 2 AB4 5 GLN E 186 TYR E 190 -1 N TYR E 190 O ASN E 194 SHEET 3 AB4 5 LEU E 174 GLN E 179 -1 N TRP E 176 O ILE E 189 SHEET 4 AB4 5 VAL E 226 GLN E 231 -1 O TYR E 228 N PHE E 177 SHEET 5 AB4 5 THR E 243 LYS E 244 -1 O THR E 243 N TYR E 227 SHEET 1 AB5 3 ILE A 189 GLU A 191 0 SHEET 2 AB5 3 VAL A 199 VAL A 206 -1 O ASP A 205 N ILE A 190 SHEET 3 AB5 3 PHE A 194 LEU A 196 -1 N PHE A 194 O PHE A 201 SHEET 1 AB6 6 ILE A 189 GLU A 191 0 SHEET 2 AB6 6 VAL A 199 VAL A 206 -1 O ASP A 205 N ILE A 190 SHEET 3 AB6 6 LEU A 40 GLY A 46 1 N LEU A 42 O HIS A 202 SHEET 4 AB6 6 ALA A 225 ASP A 231 1 O ILE A 227 N LEU A 43 SHEET 5 AB6 6 SER A 258 ASN A 264 1 O PHE A 262 N PHE A 228 SHEET 6 AB6 6 CYS A 331 TYR A 332 1 O TYR A 332 N VAL A 259 SSBOND 1 CYS R 175 CYS R 254 1555 1555 2.03 SSBOND 2 CYS E 22 CYS E 96 1555 1555 2.03 SSBOND 3 CYS E 159 CYS E 229 1555 1555 2.04 CISPEP 1 TYR E 235 PRO E 236 0 1.46 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 2301 ASN B 340 TER 2476 SER G 57 TER 4804 SER R 376 TER 6570 LEU E 247 TER 8272 VAL A 366 CONECT 3235 3848 CONECT 3848 3235 CONECT 4955 5535 CONECT 5535 4955 CONECT 5887 6430 CONECT 6430 5887 MASTER 489 0 0 32 59 0 0 6 8267 5 6 110 END