HEADER RNA BINDING PROTEIN/RNA 13-AUG-24 9D5J TITLE HUMAN ADENOSINE DEAMINASE ACTING ON DSRNA (ADAR2-RD) BOUND TO DSRNA TITLE 2 CONTAINING DEOXYINOSINE AT THE -1 POSITION OF THE GUIDE STRAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 4 OF DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 215-701; COMPND 5 SYNONYM: RNA-EDITING DEAMINASE 1,RNA-EDITING ENZYME 1,DSRNA ADENOSINE COMPND 6 DEAMINASE; COMPND 7 EC: 3.5.4.37; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: RNA TOP STRAND CONTAINING 8-AZANEBULARINE (8AZ); COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: RNA BOTTOM STRAND CONTAINING DEOXYINOSINE COMPLEMENTARY TO COMPND 16 A GUANOSINE ADJACENT TO THE TARGET SITE; COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADARB1, ADAR2, DRADA2, RED1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS ADENOSINE DEAMINASE, DSRNA, COMPLEX, RNA EDITING, DEOXYINOSINE, RNA KEYWDS 2 BINDING PROTEIN, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.FISHER,J.CHENG,A.MANJUNATH,K.CAMPBELL REVDAT 1 06-NOV-24 9D5J 0 JRNL AUTH A.MANJUNATH,J.CHENG,K.B.CAMPBELL,C.S.JACOBSEN,H.G.MENDOZA, JRNL AUTH 2 L.BIERBAUM,V.JAUREGUI-MATOS,E.E.DOHERTY,A.J.FISHER,P.A.BEAL JRNL TITL NUCLEOSIDE ANALOGS IN ADAR GUIDE STRANDS ENABLE EDITING AT JRNL TITL 2 5'-G A SITES. JRNL REF BIOMOLECULES V. 14 2024 JRNL REFN ESSN 2218-273X JRNL PMID 39456162 JRNL DOI 10.3390/BIOM14101229 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 65.0 REMARK 3 NUMBER OF REFLECTIONS : 21939 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6000 - 5.6100 0.98 4048 203 0.1729 0.2384 REMARK 3 2 5.6100 - 4.4500 1.00 3997 229 0.1732 0.2089 REMARK 3 3 4.4500 - 3.8900 0.95 3796 206 0.1746 0.2106 REMARK 3 4 3.8900 - 3.5300 0.84 3339 158 0.1923 0.2449 REMARK 3 5 3.5300 - 3.2800 0.67 2673 145 0.2425 0.2945 REMARK 3 6 3.2800 - 3.0900 0.48 1903 90 0.2751 0.3047 REMARK 3 7 3.0900 - 2.9300 0.23 915 48 0.2980 0.2906 REMARK 3 8 2.9300 - 2.8100 0.05 177 12 0.3452 0.5455 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.278 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.896 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8290 REMARK 3 ANGLE : 1.137 11529 REMARK 3 CHIRALITY : 0.052 1347 REMARK 3 PLANARITY : 0.009 1231 REMARK 3 DIHEDRAL : 20.256 3510 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7251 45.2554 27.2321 REMARK 3 T TENSOR REMARK 3 T11: 0.3151 T22: 0.2795 REMARK 3 T33: 0.2632 T12: 0.0856 REMARK 3 T13: 0.0653 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.1468 L22: 1.3891 REMARK 3 L33: 1.0917 L12: 0.5344 REMARK 3 L13: -0.1797 L23: -0.3412 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: 0.1341 S13: 0.0849 REMARK 3 S21: -0.0847 S22: -0.0829 S23: -0.0950 REMARK 3 S31: 0.1206 S32: 0.1351 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 464 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7850 63.9941 43.6362 REMARK 3 T TENSOR REMARK 3 T11: 0.3943 T22: 0.2875 REMARK 3 T33: 0.4784 T12: -0.0181 REMARK 3 T13: 0.0071 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.2965 L22: 0.4370 REMARK 3 L33: 0.0386 L12: -0.4242 REMARK 3 L13: -0.0909 L23: 0.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.0510 S12: -0.0987 S13: 0.4304 REMARK 3 S21: 0.2046 S22: -0.0142 S23: 0.1672 REMARK 3 S31: -0.2779 S32: -0.1130 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 501 THROUGH 699 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.9698 42.9461 36.2146 REMARK 3 T TENSOR REMARK 3 T11: 0.3527 T22: 0.2349 REMARK 3 T33: 0.2268 T12: 0.0043 REMARK 3 T13: -0.0119 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 1.2970 L22: 0.9403 REMARK 3 L33: 0.7609 L12: -0.3894 REMARK 3 L13: -0.0079 L23: 0.1085 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.0534 S13: -0.1309 REMARK 3 S21: 0.0610 S22: 0.0346 S23: 0.0461 REMARK 3 S31: 0.0322 S32: 0.0829 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 235 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): -73.8250 57.0015 14.3777 REMARK 3 T TENSOR REMARK 3 T11: 0.6814 T22: 1.2794 REMARK 3 T33: 0.7834 T12: -0.0148 REMARK 3 T13: -0.1135 T23: 0.1946 REMARK 3 L TENSOR REMARK 3 L11: 0.1915 L22: 0.2482 REMARK 3 L33: 0.1054 L12: -0.3758 REMARK 3 L13: 0.2187 L23: -0.1723 REMARK 3 S TENSOR REMARK 3 S11: -0.0292 S12: -0.0368 S13: -0.0346 REMARK 3 S21: -0.3309 S22: 0.4307 S23: -0.0504 REMARK 3 S31: -0.2401 S32: -0.8416 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 304 THROUGH 485 ) REMARK 3 ORIGIN FOR THE GROUP (A): -82.6989 47.6175 40.3745 REMARK 3 T TENSOR REMARK 3 T11: 0.2609 T22: 0.4824 REMARK 3 T33: 0.5075 T12: 0.0117 REMARK 3 T13: -0.0230 T23: 0.1197 REMARK 3 L TENSOR REMARK 3 L11: 1.4218 L22: -0.0847 REMARK 3 L33: 0.3421 L12: 0.2148 REMARK 3 L13: 0.1374 L23: 0.1078 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: 0.0086 S13: -0.1916 REMARK 3 S21: -0.0682 S22: 0.0935 S23: 0.0815 REMARK 3 S31: -0.1026 S32: -0.1751 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 486 THROUGH 512 ) REMARK 3 ORIGIN FOR THE GROUP (A): -62.2768 41.2755 57.6696 REMARK 3 T TENSOR REMARK 3 T11: 0.6859 T22: 0.5763 REMARK 3 T33: 0.6395 T12: 0.0754 REMARK 3 T13: -0.1057 T23: 0.1931 REMARK 3 L TENSOR REMARK 3 L11: 0.0267 L22: 0.0386 REMARK 3 L33: 0.0494 L12: 0.0502 REMARK 3 L13: 0.0643 L23: 0.0731 REMARK 3 S TENSOR REMARK 3 S11: -0.3718 S12: -0.3486 S13: -0.3170 REMARK 3 S21: 0.1230 S22: 0.1348 S23: -0.1071 REMARK 3 S31: 0.1441 S32: 0.4640 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 513 THROUGH 700 ) REMARK 3 ORIGIN FOR THE GROUP (A): -80.7338 42.1163 49.4452 REMARK 3 T TENSOR REMARK 3 T11: 0.3537 T22: 0.4683 REMARK 3 T33: 0.4791 T12: -0.0228 REMARK 3 T13: 0.0319 T23: 0.1309 REMARK 3 L TENSOR REMARK 3 L11: 1.9976 L22: 1.0539 REMARK 3 L33: 0.6305 L12: -0.0615 REMARK 3 L13: 0.2324 L23: 0.2759 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: -0.3122 S13: -0.2926 REMARK 3 S21: 0.0291 S22: 0.1112 S23: -0.0324 REMARK 3 S31: -0.0136 S32: -0.1942 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.9318 70.9715 42.7379 REMARK 3 T TENSOR REMARK 3 T11: 0.5673 T22: 0.4258 REMARK 3 T33: 0.4076 T12: 0.0293 REMARK 3 T13: -0.0857 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.4225 L22: 0.7242 REMARK 3 L33: 0.1516 L12: 0.0990 REMARK 3 L13: -0.5278 L23: 0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: -0.1530 S13: -0.2076 REMARK 3 S21: -0.3854 S22: 0.0783 S23: -0.0959 REMARK 3 S31: -0.5022 S32: -0.2463 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.6199 62.8300 0.9354 REMARK 3 T TENSOR REMARK 3 T11: 0.8695 T22: 1.1521 REMARK 3 T33: 0.6449 T12: -0.0142 REMARK 3 T13: -0.0560 T23: 0.0812 REMARK 3 L TENSOR REMARK 3 L11: 0.0739 L22: -0.0960 REMARK 3 L33: 0.3237 L12: 0.0397 REMARK 3 L13: 0.1739 L23: -0.3056 REMARK 3 S TENSOR REMARK 3 S11: -0.1100 S12: 0.4023 S13: -0.3560 REMARK 3 S21: 0.0214 S22: 0.4662 S23: -0.3551 REMARK 3 S31: -0.3556 S32: 0.2758 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.2118 64.4727 3.4561 REMARK 3 T TENSOR REMARK 3 T11: 1.1816 T22: 1.0132 REMARK 3 T33: 0.7299 T12: -0.0593 REMARK 3 T13: -0.0549 T23: 0.1804 REMARK 3 L TENSOR REMARK 3 L11: 0.1100 L22: 0.2926 REMARK 3 L33: 0.1854 L12: 0.3913 REMARK 3 L13: -0.1808 L23: -0.1572 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.0413 S13: -0.4079 REMARK 3 S21: 0.0445 S22: 0.1030 S23: -0.5905 REMARK 3 S31: -0.7969 S32: -1.0368 S33: 0.0002 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 17 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4459 73.6987 47.3021 REMARK 3 T TENSOR REMARK 3 T11: 0.6554 T22: 0.3618 REMARK 3 T33: 0.4024 T12: 0.1092 REMARK 3 T13: -0.0237 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.1660 L22: 0.4768 REMARK 3 L33: -0.0071 L12: -0.3632 REMARK 3 L13: 0.0867 L23: -0.1239 REMARK 3 S TENSOR REMARK 3 S11: -0.1527 S12: -0.3413 S13: -0.2157 REMARK 3 S21: -0.3019 S22: 0.1630 S23: 0.0174 REMARK 3 S31: -0.6941 S32: -0.1435 S33: -0.0112 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 492 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.6469 52.4323 48.3443 REMARK 3 T TENSOR REMARK 3 T11: 1.0312 T22: 0.0804 REMARK 3 T33: 0.0718 T12: 0.0638 REMARK 3 T13: -0.1042 T23: 0.4118 REMARK 3 L TENSOR REMARK 3 L11: 0.1227 L22: 0.1907 REMARK 3 L33: 0.0748 L12: -0.1416 REMARK 3 L13: -0.0028 L23: -0.0448 REMARK 3 S TENSOR REMARK 3 S11: -0.4513 S12: -0.3944 S13: 0.0014 REMARK 3 S21: 0.4828 S22: 0.1247 S23: -0.0368 REMARK 3 S31: 0.2472 S32: -0.4282 S33: -0.0386 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000287237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21944 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 48.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.85200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MOPS PH 7.0, 100 MM SODIUM REMARK 280 CHLORIDE, 9% PEG4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.34700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.56500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.34700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.56500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -151.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 215 REMARK 465 SER A 216 REMARK 465 LEU A 217 REMARK 465 ALA A 218 REMARK 465 GLN A 219 REMARK 465 PRO A 220 REMARK 465 PRO A 221 REMARK 465 LEU A 222 REMARK 465 PRO A 223 REMARK 465 VAL A 224 REMARK 465 LEU A 225 REMARK 465 PRO A 226 REMARK 465 PRO A 227 REMARK 465 PHE A 228 REMARK 465 PRO A 229 REMARK 465 PRO A 230 REMARK 465 PRO A 231 REMARK 465 SER A 232 REMARK 465 GLY A 233 REMARK 465 LYS A 234 REMARK 465 ASN A 235 REMARK 465 PRO A 236 REMARK 465 VAL A 237 REMARK 465 MET A 238 REMARK 465 ILE A 239 REMARK 465 LEU A 240 REMARK 465 ASN A 241 REMARK 465 GLU A 242 REMARK 465 LEU A 243 REMARK 465 ARG A 244 REMARK 465 PRO A 245 REMARK 465 GLY A 246 REMARK 465 LEU A 247 REMARK 465 LYS A 248 REMARK 465 TYR A 249 REMARK 465 ASP A 250 REMARK 465 PHE A 251 REMARK 465 LEU A 252 REMARK 465 SER A 253 REMARK 465 GLU A 254 REMARK 465 SER A 255 REMARK 465 GLY A 256 REMARK 465 GLU A 257 REMARK 465 SER A 258 REMARK 465 HIS A 259 REMARK 465 ALA A 260 REMARK 465 LYS A 261 REMARK 465 SER A 262 REMARK 465 PHE A 263 REMARK 465 VAL A 264 REMARK 465 MET A 265 REMARK 465 SER A 266 REMARK 465 VAL A 267 REMARK 465 VAL A 268 REMARK 465 VAL A 269 REMARK 465 ASP A 270 REMARK 465 GLY A 271 REMARK 465 GLN A 272 REMARK 465 PHE A 273 REMARK 465 PHE A 274 REMARK 465 GLU A 275 REMARK 465 GLY A 276 REMARK 465 SER A 277 REMARK 465 GLY A 278 REMARK 465 ARG A 279 REMARK 465 ASN A 280 REMARK 465 LYS A 281 REMARK 465 LYS A 282 REMARK 465 LEU A 283 REMARK 465 ALA A 284 REMARK 465 LYS A 285 REMARK 465 ALA A 286 REMARK 465 ARG A 287 REMARK 465 ALA A 288 REMARK 465 ALA A 289 REMARK 465 GLN A 290 REMARK 465 SER A 291 REMARK 465 ALA A 292 REMARK 465 LEU A 293 REMARK 465 ALA A 294 REMARK 465 ALA A 295 REMARK 465 ILE A 296 REMARK 465 PHE A 297 REMARK 465 ASN A 298 REMARK 465 LEU A 299 REMARK 465 HIS A 300 REMARK 465 LEU A 301 REMARK 465 ASP A 302 REMARK 465 GLN A 303 REMARK 465 THR A 304 REMARK 465 PRO A 305 REMARK 465 SER A 306 REMARK 465 ARG A 307 REMARK 465 GLN A 308 REMARK 465 PRO A 309 REMARK 465 ILE A 310 REMARK 465 PRO A 311 REMARK 465 SER A 312 REMARK 465 GLU A 313 REMARK 465 GLY A 314 REMARK 465 LEU A 315 REMARK 465 THR A 700 REMARK 465 PRO A 701 REMARK 465 ALA B 215 REMARK 465 SER B 216 REMARK 465 LEU B 217 REMARK 465 ALA B 218 REMARK 465 GLN B 219 REMARK 465 PRO B 220 REMARK 465 PRO B 221 REMARK 465 LEU B 222 REMARK 465 PRO B 223 REMARK 465 VAL B 224 REMARK 465 LEU B 225 REMARK 465 PRO B 226 REMARK 465 PRO B 227 REMARK 465 PHE B 228 REMARK 465 PRO B 229 REMARK 465 PRO B 230 REMARK 465 PRO B 231 REMARK 465 SER B 232 REMARK 465 GLY B 233 REMARK 465 LYS B 234 REMARK 465 LEU B 464 REMARK 465 GLU B 465 REMARK 465 GLU B 466 REMARK 465 PRO B 467 REMARK 465 ALA B 468 REMARK 465 ASP B 469 REMARK 465 ARG B 470 REMARK 465 HIS B 471 REMARK 465 PRO B 472 REMARK 465 ASN B 473 REMARK 465 ARG B 474 REMARK 465 LYS B 475 REMARK 465 PRO B 701 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 311 CG REMARK 470 ILE B 463 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 340 OG SER B 343 2.11 REMARK 500 O ASP B 569 NH1 ARG B 674 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 410 O2' G C 32 4445 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G C 18 N3 - C4 - C5 ANGL. DEV. = 3.9 DEGREES REMARK 500 G C 18 N3 - C4 - N9 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 322 -71.24 119.92 REMARK 500 ALA A 353 138.12 -173.04 REMARK 500 ALA A 366 119.87 -165.47 REMARK 500 SER A 458 77.54 -150.96 REMARK 500 ARG A 494 5.52 81.00 REMARK 500 SER A 495 -9.52 71.99 REMARK 500 TYR A 561 -34.47 -135.07 REMARK 500 SER A 565 9.65 -66.23 REMARK 500 LEU A 573 -11.88 75.68 REMARK 500 ALA A 664 -8.61 -58.57 REMARK 500 ALA A 682 6.71 -67.31 REMARK 500 GLU B 257 161.69 177.10 REMARK 500 SER B 258 -131.91 64.39 REMARK 500 PHE B 297 -72.60 -96.33 REMARK 500 PRO B 311 -174.76 -67.20 REMARK 500 HIS B 318 -160.29 44.64 REMARK 500 PHE B 342 14.03 60.00 REMARK 500 ARG B 348 45.27 -80.03 REMARK 500 ASN B 416 -152.44 -153.12 REMARK 500 ASN B 417 120.16 -37.10 REMARK 500 GLU B 461 73.80 -165.34 REMARK 500 ALA B 497 -96.77 -167.70 REMARK 500 GLN B 500 -167.83 -103.89 REMARK 500 ASP B 503 51.36 -94.93 REMARK 500 GLN B 507 -77.22 -121.11 REMARK 500 SER B 531 -70.46 -55.84 REMARK 500 ILE B 535 1.13 -69.33 REMARK 500 TYR B 561 -34.55 -137.01 REMARK 500 ASN B 566 3.66 -64.70 REMARK 500 LEU B 573 -5.96 77.79 REMARK 500 ASN B 586 67.27 -101.66 REMARK 500 PRO B 592 150.61 -49.07 REMARK 500 ASN B 656 -59.61 -120.96 REMARK 500 TRP B 687 126.94 -36.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 394 ND1 REMARK 620 2 CYS A 451 SG 100.1 REMARK 620 3 CYS A 516 SG 112.8 107.5 REMARK 620 4 8AZ C 13 O6 118.2 90.0 121.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 394 ND1 REMARK 620 2 CYS B 451 SG 107.4 REMARK 620 3 CYS B 516 SG 108.9 108.1 REMARK 620 4 HOH B 901 O 134.6 94.3 100.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VFF RELATED DB: PDB REMARK 900 6VFF CONTAINS THE SAME PROTEIN COMPLEXED WITH A SIMILAR DSRNA REMARK 900 RELATED ID: 8E0F RELATED DB: PDB REMARK 900 8E0F CONTAINS THE SAME PROTEIN COMPLEXED WITH A DSRNA WITH A 5'G REMARK 900 ADJACENT TO THE TARGET SITE REMARK 900 RELATED ID: 8E4X RELATED DB: PDB REMARK 900 8E4X CONTAINS THE SAME PROTEIN COMPLEXED WITH A DSRNA WITH A 5'G REMARK 900 ADJACENT TO THE TARGET SITE DBREF 9D5J A 215 701 UNP P78563 RED1_HUMAN 243 729 DBREF 9D5J B 215 701 UNP P78563 RED1_HUMAN 243 729 DBREF 9D5J C 1 32 PDB 9D5J 9D5J 1 32 DBREF 9D5J D 1 32 PDB 9D5J 9D5J 1 32 SEQADV 9D5J GLN A 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQADV 9D5J GLN B 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQRES 1 A 487 ALA SER LEU ALA GLN PRO PRO LEU PRO VAL LEU PRO PRO SEQRES 2 A 487 PHE PRO PRO PRO SER GLY LYS ASN PRO VAL MET ILE LEU SEQRES 3 A 487 ASN GLU LEU ARG PRO GLY LEU LYS TYR ASP PHE LEU SER SEQRES 4 A 487 GLU SER GLY GLU SER HIS ALA LYS SER PHE VAL MET SER SEQRES 5 A 487 VAL VAL VAL ASP GLY GLN PHE PHE GLU GLY SER GLY ARG SEQRES 6 A 487 ASN LYS LYS LEU ALA LYS ALA ARG ALA ALA GLN SER ALA SEQRES 7 A 487 LEU ALA ALA ILE PHE ASN LEU HIS LEU ASP GLN THR PRO SEQRES 8 A 487 SER ARG GLN PRO ILE PRO SER GLU GLY LEU GLN LEU HIS SEQRES 9 A 487 LEU PRO GLN VAL LEU ALA ASP ALA VAL SER ARG LEU VAL SEQRES 10 A 487 LEU GLY LYS PHE GLY ASP LEU THR ASP ASN PHE SER SER SEQRES 11 A 487 PRO HIS ALA ARG ARG LYS VAL LEU ALA GLY VAL VAL MET SEQRES 12 A 487 THR THR GLY THR ASP VAL LYS ASP ALA LYS VAL ILE SER SEQRES 13 A 487 VAL SER THR GLY THR LYS CYS ILE ASN GLY GLU TYR MET SEQRES 14 A 487 SER ASP ARG GLY LEU ALA LEU ASN ASP CYS HIS ALA GLU SEQRES 15 A 487 ILE ILE SER ARG ARG SER LEU LEU ARG PHE LEU TYR THR SEQRES 16 A 487 GLN LEU GLU LEU TYR LEU ASN ASN LYS ASP ASP GLN LYS SEQRES 17 A 487 ARG SER ILE PHE GLN LYS SER GLU ARG GLY GLY PHE ARG SEQRES 18 A 487 LEU LYS GLU ASN VAL GLN PHE HIS LEU TYR ILE SER THR SEQRES 19 A 487 SER PRO CYS GLY ASP ALA ARG ILE PHE SER PRO HIS GLU SEQRES 20 A 487 PRO ILE LEU GLU GLU PRO ALA ASP ARG HIS PRO ASN ARG SEQRES 21 A 487 LYS ALA ARG GLY GLN LEU ARG THR LYS ILE GLU SER GLY SEQRES 22 A 487 GLN GLY THR ILE PRO VAL ARG SER ASN ALA SER ILE GLN SEQRES 23 A 487 THR TRP ASP GLY VAL LEU GLN GLY GLU ARG LEU LEU THR SEQRES 24 A 487 MET SER CYS SER ASP LYS ILE ALA ARG TRP ASN VAL VAL SEQRES 25 A 487 GLY ILE GLN GLY SER LEU LEU SER ILE PHE VAL GLU PRO SEQRES 26 A 487 ILE TYR PHE SER SER ILE ILE LEU GLY SER LEU TYR HIS SEQRES 27 A 487 GLY ASP HIS LEU SER ARG ALA MET TYR GLN ARG ILE SER SEQRES 28 A 487 ASN ILE GLU ASP LEU PRO PRO LEU TYR THR LEU ASN LYS SEQRES 29 A 487 PRO LEU LEU SER GLY ILE SER ASN ALA GLU ALA ARG GLN SEQRES 30 A 487 PRO GLY LYS ALA PRO ASN PHE SER VAL ASN TRP THR VAL SEQRES 31 A 487 GLY ASP SER ALA ILE GLU VAL ILE ASN ALA THR THR GLY SEQRES 32 A 487 LYS ASP GLU LEU GLY ARG ALA SER ARG LEU CYS LYS HIS SEQRES 33 A 487 ALA LEU TYR CYS ARG TRP MET ARG VAL HIS GLY LYS VAL SEQRES 34 A 487 PRO SER HIS LEU LEU ARG SER LYS ILE THR LYS PRO ASN SEQRES 35 A 487 VAL TYR HIS GLU SER LYS LEU ALA ALA LYS GLU TYR GLN SEQRES 36 A 487 ALA ALA LYS ALA ARG LEU PHE THR ALA PHE ILE LYS ALA SEQRES 37 A 487 GLY LEU GLY ALA TRP VAL GLU LYS PRO THR GLU GLN ASP SEQRES 38 A 487 GLN PHE SER LEU THR PRO SEQRES 1 B 487 ALA SER LEU ALA GLN PRO PRO LEU PRO VAL LEU PRO PRO SEQRES 2 B 487 PHE PRO PRO PRO SER GLY LYS ASN PRO VAL MET ILE LEU SEQRES 3 B 487 ASN GLU LEU ARG PRO GLY LEU LYS TYR ASP PHE LEU SER SEQRES 4 B 487 GLU SER GLY GLU SER HIS ALA LYS SER PHE VAL MET SER SEQRES 5 B 487 VAL VAL VAL ASP GLY GLN PHE PHE GLU GLY SER GLY ARG SEQRES 6 B 487 ASN LYS LYS LEU ALA LYS ALA ARG ALA ALA GLN SER ALA SEQRES 7 B 487 LEU ALA ALA ILE PHE ASN LEU HIS LEU ASP GLN THR PRO SEQRES 8 B 487 SER ARG GLN PRO ILE PRO SER GLU GLY LEU GLN LEU HIS SEQRES 9 B 487 LEU PRO GLN VAL LEU ALA ASP ALA VAL SER ARG LEU VAL SEQRES 10 B 487 LEU GLY LYS PHE GLY ASP LEU THR ASP ASN PHE SER SER SEQRES 11 B 487 PRO HIS ALA ARG ARG LYS VAL LEU ALA GLY VAL VAL MET SEQRES 12 B 487 THR THR GLY THR ASP VAL LYS ASP ALA LYS VAL ILE SER SEQRES 13 B 487 VAL SER THR GLY THR LYS CYS ILE ASN GLY GLU TYR MET SEQRES 14 B 487 SER ASP ARG GLY LEU ALA LEU ASN ASP CYS HIS ALA GLU SEQRES 15 B 487 ILE ILE SER ARG ARG SER LEU LEU ARG PHE LEU TYR THR SEQRES 16 B 487 GLN LEU GLU LEU TYR LEU ASN ASN LYS ASP ASP GLN LYS SEQRES 17 B 487 ARG SER ILE PHE GLN LYS SER GLU ARG GLY GLY PHE ARG SEQRES 18 B 487 LEU LYS GLU ASN VAL GLN PHE HIS LEU TYR ILE SER THR SEQRES 19 B 487 SER PRO CYS GLY ASP ALA ARG ILE PHE SER PRO HIS GLU SEQRES 20 B 487 PRO ILE LEU GLU GLU PRO ALA ASP ARG HIS PRO ASN ARG SEQRES 21 B 487 LYS ALA ARG GLY GLN LEU ARG THR LYS ILE GLU SER GLY SEQRES 22 B 487 GLN GLY THR ILE PRO VAL ARG SER ASN ALA SER ILE GLN SEQRES 23 B 487 THR TRP ASP GLY VAL LEU GLN GLY GLU ARG LEU LEU THR SEQRES 24 B 487 MET SER CYS SER ASP LYS ILE ALA ARG TRP ASN VAL VAL SEQRES 25 B 487 GLY ILE GLN GLY SER LEU LEU SER ILE PHE VAL GLU PRO SEQRES 26 B 487 ILE TYR PHE SER SER ILE ILE LEU GLY SER LEU TYR HIS SEQRES 27 B 487 GLY ASP HIS LEU SER ARG ALA MET TYR GLN ARG ILE SER SEQRES 28 B 487 ASN ILE GLU ASP LEU PRO PRO LEU TYR THR LEU ASN LYS SEQRES 29 B 487 PRO LEU LEU SER GLY ILE SER ASN ALA GLU ALA ARG GLN SEQRES 30 B 487 PRO GLY LYS ALA PRO ASN PHE SER VAL ASN TRP THR VAL SEQRES 31 B 487 GLY ASP SER ALA ILE GLU VAL ILE ASN ALA THR THR GLY SEQRES 32 B 487 LYS ASP GLU LEU GLY ARG ALA SER ARG LEU CYS LYS HIS SEQRES 33 B 487 ALA LEU TYR CYS ARG TRP MET ARG VAL HIS GLY LYS VAL SEQRES 34 B 487 PRO SER HIS LEU LEU ARG SER LYS ILE THR LYS PRO ASN SEQRES 35 B 487 VAL TYR HIS GLU SER LYS LEU ALA ALA LYS GLU TYR GLN SEQRES 36 B 487 ALA ALA LYS ALA ARG LEU PHE THR ALA PHE ILE LYS ALA SEQRES 37 B 487 GLY LEU GLY ALA TRP VAL GLU LYS PRO THR GLU GLN ASP SEQRES 38 B 487 GLN PHE SER LEU THR PRO SEQRES 1 C 32 G C U C G C G A U G C G 8AZ SEQRES 2 C 32 G A G G G C U C U G A U A SEQRES 3 C 32 G C U A C G SEQRES 1 D 32 C G U A G C U A U C A G A SEQRES 2 D 32 G C C C C C C DI G C A U C SEQRES 3 D 32 G C G A G C HET 8AZ C 13 22 HET IHP A 801 36 HET ZN A 802 1 HET EDO A 803 4 HET IHP B 801 36 HET ZN B 802 1 HET EDO C 101 4 HET EDO D 101 4 HETNAM 8AZ 8-AZA-NEBULARINE-5'-MONOPHOSPHATE HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 8AZ C9 H14 N5 O8 P FORMUL 5 IHP 2(C6 H18 O24 P6) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 12 HOH *15(H2 O) HELIX 1 AA1 LEU A 319 THR A 339 1 21 HELIX 2 AA2 SER A 344 ARG A 348 5 5 HELIX 3 AA3 ASN A 379 MET A 383 5 5 HELIX 4 AA4 ALA A 395 LEU A 415 1 21 HELIX 5 AA5 ASN A 417 LYS A 422 1 6 HELIX 6 AA6 THR A 501 GLN A 507 1 7 HELIX 7 AA7 SER A 515 GLY A 527 1 13 HELIX 8 AA8 LEU A 532 PHE A 536 5 5 HELIX 9 AA9 HIS A 552 TYR A 561 1 10 HELIX 10 AB1 GLN A 562 SER A 565 5 4 HELIX 11 AB2 CYS A 628 GLY A 641 1 14 HELIX 12 AB3 VAL A 657 ALA A 664 1 8 HELIX 13 AB4 ALA A 665 ALA A 682 1 18 HELIX 14 AB5 PRO A 691 GLN A 696 5 6 HELIX 15 AB6 PRO B 236 ARG B 244 1 9 HELIX 16 AB7 ASN B 280 PHE B 297 1 18 HELIX 17 AB8 GLN B 303 ARG B 307 5 5 HELIX 18 AB9 LEU B 319 THR B 339 1 21 HELIX 19 AC1 SER B 344 ARG B 348 5 5 HELIX 20 AC2 ASP B 362 LYS B 364 5 3 HELIX 21 AC3 ASN B 379 MET B 383 5 5 HELIX 22 AC4 HIS B 394 LEU B 415 1 22 HELIX 23 AC5 ASP B 419 SER B 424 1 6 HELIX 24 AC6 GLY B 452 ILE B 456 5 5 HELIX 25 AC7 SER B 515 GLY B 527 1 13 HELIX 26 AC8 GLN B 529 ILE B 535 1 7 HELIX 27 AC9 HIS B 552 TYR B 561 1 10 HELIX 28 AD1 GLN B 562 SER B 565 5 4 HELIX 29 AD2 CYS B 628 VAL B 643 1 16 HELIX 30 AD3 VAL B 657 ALA B 664 1 8 HELIX 31 AD4 ALA B 665 ALA B 682 1 18 HELIX 32 AD5 PRO B 691 ASP B 695 5 5 SHEET 1 AA1 8 LEU A 580 GLY A 583 0 SHEET 2 AA1 8 PHE A 542 LEU A 547 1 N ILE A 545 O LEU A 580 SHEET 3 AA1 8 GLN A 441 ILE A 446 1 N LEU A 444 O ILE A 546 SHEET 4 AA1 8 LEU A 352 THR A 358 -1 N GLY A 354 O TYR A 445 SHEET 5 AA1 8 VAL A 368 THR A 373 -1 O SER A 372 N ALA A 353 SHEET 6 AA1 8 PHE A 598 THR A 603 -1 O TRP A 602 N VAL A 371 SHEET 7 AA1 8 GLU A 610 ASN A 613 -1 O ILE A 612 N SER A 599 SHEET 8 AA1 8 LYS A 618 ASP A 619 -1 O LYS A 618 N ASN A 613 SHEET 1 AA2 2 THR A 375 CYS A 377 0 SHEET 2 AA2 2 ASP A 392 HIS A 394 -1 O CYS A 393 N LYS A 376 SHEET 1 AA3 2 PHE A 426 LYS A 428 0 SHEET 2 AA3 2 PHE A 434 LEU A 436 -1 O ARG A 435 N GLN A 427 SHEET 1 AA4 3 GLY A 487 PRO A 492 0 SHEET 2 AA4 3 ARG A 481 ILE A 484 -1 N THR A 482 O ILE A 491 SHEET 3 AA4 3 LEU A 512 MET A 514 -1 O THR A 513 N LYS A 483 SHEET 1 AA5 3 ASP B 250 SER B 253 0 SHEET 2 AA5 3 PHE B 263 VAL B 269 -1 O SER B 266 N ASP B 250 SHEET 3 AA5 3 GLN B 272 GLY B 278 -1 O PHE B 274 N VAL B 267 SHEET 1 AA6 2 GLY B 256 GLU B 257 0 SHEET 2 AA6 2 ALA B 260 LYS B 261 -1 O ALA B 260 N GLU B 257 SHEET 1 AA7 7 LEU B 580 GLY B 583 0 SHEET 2 AA7 7 SER B 544 LEU B 547 1 N ILE B 545 O LEU B 580 SHEET 3 AA7 7 GLN B 441 ILE B 446 1 N ILE B 446 O ILE B 546 SHEET 4 AA7 7 LEU B 352 THR B 358 -1 N THR B 358 O GLN B 441 SHEET 5 AA7 7 ALA B 366 THR B 373 -1 O SER B 372 N ALA B 353 SHEET 6 AA7 7 PHE B 598 THR B 603 -1 O VAL B 600 N THR B 373 SHEET 7 AA7 7 GLU B 610 ASN B 613 -1 O ILE B 612 N SER B 599 SHEET 1 AA8 2 PHE B 426 GLN B 427 0 SHEET 2 AA8 2 ARG B 435 LEU B 436 -1 O ARG B 435 N GLN B 427 SHEET 1 AA9 2 ARG B 481 LYS B 483 0 SHEET 2 AA9 2 THR B 490 PRO B 492 -1 O ILE B 491 N THR B 482 LINK O3' G C 12 P 8AZ C 13 1555 1555 1.60 LINK O3' 8AZ C 13 P G C 14 1555 1555 1.60 LINK ND1 HIS A 394 ZN ZN A 802 1555 1555 2.09 LINK SG CYS A 451 ZN ZN A 802 1555 1555 2.41 LINK SG CYS A 516 ZN ZN A 802 1555 1555 2.28 LINK ZN ZN A 802 O6 8AZ C 13 1555 1555 2.15 LINK ND1 HIS B 394 ZN ZN B 802 1555 1555 2.06 LINK SG CYS B 451 ZN ZN B 802 1555 1555 2.30 LINK SG CYS B 516 ZN ZN B 802 1555 1555 2.24 LINK ZN ZN B 802 O HOH B 901 1555 1555 1.96 CRYST1 174.694 63.130 141.778 90.00 118.23 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005724 0.000000 0.003073 0.00000 SCALE2 0.000000 0.015840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008006 0.00000