HEADER HYDROLASE/INHIBITOR 16-AUG-24 9D79 TITLE OXA-58-NA-1-157 1.5 MIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: BLAOXA-58, BLA-OXA-58, BLA-OXA58, GSE42_20550, P9867_20895; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-LACTAMASE, CARBAPENEMASE, ANTIBIOTIC RESISTANCE, INHIBITOR, KEYWDS 2 HYDROLASE, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.SMITH,A.O.MAGGIOLO,M.TOTH,S.B.VAKULENKO REVDAT 1 11-DEC-24 9D79 0 JRNL AUTH M.TOTH,N.K.STEWART,A.O.MAGGIOLO,P.QUAN,M.M.K.KHAN, JRNL AUTH 2 J.D.BUYNAK,C.A.SMITH,S.B.VAKULENKO JRNL TITL DECARBOXYLATION OF THE CATALYTIC LYSINE RESIDUE BY THE C5 JRNL TITL 2 ALPHA-METHYL-SUBSTITUTED CARBAPENEM NA-1-157 LEADS TO POTENT JRNL TITL 3 INHIBITION OF THE OXA-58 CARBAPENEMASE. JRNL REF ACS INFECT DIS. 2024 JRNL REFN ESSN 2373-8227 JRNL PMID 39601221 JRNL DOI 10.1021/ACSINFECDIS.4C00671 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.1_5286: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 73506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0900 - 5.6200 0.98 2804 128 0.1928 0.1983 REMARK 3 2 5.6200 - 4.4700 0.98 2698 148 0.1858 0.2294 REMARK 3 3 4.4700 - 3.9000 1.00 2747 140 0.1867 0.2055 REMARK 3 4 3.9000 - 3.5500 1.00 2726 140 0.2090 0.2499 REMARK 3 5 3.5500 - 3.2900 1.00 2728 137 0.2108 0.2487 REMARK 3 6 3.2900 - 3.1000 0.99 2677 138 0.2270 0.2862 REMARK 3 7 3.1000 - 2.9400 0.97 2670 118 0.2344 0.2772 REMARK 3 8 2.9400 - 2.8100 0.99 2695 119 0.2285 0.2672 REMARK 3 9 2.8100 - 2.7100 0.98 2660 146 0.2261 0.3075 REMARK 3 10 2.7100 - 2.6100 0.99 2720 124 0.2304 0.2743 REMARK 3 11 2.6100 - 2.5300 0.99 2691 145 0.2441 0.2875 REMARK 3 12 2.5300 - 2.4600 0.99 2626 164 0.2461 0.3352 REMARK 3 13 2.4600 - 2.3900 0.99 2691 157 0.2376 0.3132 REMARK 3 14 2.3900 - 2.3400 1.00 2684 150 0.2335 0.3310 REMARK 3 15 2.3400 - 2.2800 0.99 2699 153 0.2337 0.2652 REMARK 3 16 2.2800 - 2.2300 1.00 2698 127 0.2292 0.2524 REMARK 3 17 2.2300 - 2.1900 0.99 2658 144 0.2280 0.3075 REMARK 3 18 2.1900 - 2.1500 0.99 2718 150 0.2354 0.2697 REMARK 3 19 2.1500 - 2.1100 0.97 2612 142 0.2455 0.2929 REMARK 3 20 2.1100 - 2.0700 0.98 2594 138 0.2450 0.3264 REMARK 3 21 2.0700 - 2.0400 0.99 2705 149 0.2554 0.3163 REMARK 3 22 2.0400 - 2.0100 0.99 2691 143 0.2620 0.3454 REMARK 3 23 2.0100 - 1.9800 0.99 2714 137 0.2646 0.3515 REMARK 3 24 1.9800 - 1.9500 0.99 2567 117 0.2751 0.2829 REMARK 3 25 1.9500 - 1.9300 0.99 2777 157 0.2907 0.3035 REMARK 3 26 1.9300 - 1.9000 0.97 2598 147 0.3479 0.3867 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8058 REMARK 3 ANGLE : 0.978 10915 REMARK 3 CHIRALITY : 0.054 1176 REMARK 3 PLANARITY : 0.008 1413 REMARK 3 DIHEDRAL : 18.238 2992 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0938 -4.8427 81.4672 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: 0.6355 REMARK 3 T33: 0.3737 T12: 0.0162 REMARK 3 T13: -0.0119 T23: 0.0828 REMARK 3 L TENSOR REMARK 3 L11: 0.6385 L22: 0.4698 REMARK 3 L33: 0.8793 L12: 0.5177 REMARK 3 L13: 0.3740 L23: 0.1143 REMARK 3 S TENSOR REMARK 3 S11: -0.0965 S12: -0.6689 S13: -0.2606 REMARK 3 S21: 0.3109 S22: 0.3172 S23: -0.1901 REMARK 3 S31: 0.0464 S32: 0.4604 S33: -0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0663 1.9719 70.7375 REMARK 3 T TENSOR REMARK 3 T11: 0.2390 T22: 0.4253 REMARK 3 T33: 0.2112 T12: -0.0476 REMARK 3 T13: -0.0002 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.7597 L22: 0.8461 REMARK 3 L33: 0.4360 L12: 0.1629 REMARK 3 L13: 0.1035 L23: -0.5094 REMARK 3 S TENSOR REMARK 3 S11: -0.0092 S12: -0.2299 S13: 0.0249 REMARK 3 S21: 0.0547 S22: -0.1193 S23: -0.1448 REMARK 3 S31: -0.1656 S32: -0.0021 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9820 -4.2015 52.1801 REMARK 3 T TENSOR REMARK 3 T11: 0.2578 T22: 0.3821 REMARK 3 T33: 0.2384 T12: 0.0284 REMARK 3 T13: -0.0090 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 1.9751 L22: 0.8397 REMARK 3 L33: 1.5429 L12: 0.0150 REMARK 3 L13: 0.5181 L23: 0.7865 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.4183 S13: -0.2148 REMARK 3 S21: 0.0224 S22: -0.0173 S23: -0.0847 REMARK 3 S31: 0.0436 S32: 0.0311 S33: 0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9413 0.6101 64.1625 REMARK 3 T TENSOR REMARK 3 T11: 0.2356 T22: 0.2405 REMARK 3 T33: 0.1952 T12: -0.0210 REMARK 3 T13: 0.0071 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 1.5416 L22: 1.5065 REMARK 3 L33: 2.6437 L12: -0.6166 REMARK 3 L13: 0.9514 L23: -0.4353 REMARK 3 S TENSOR REMARK 3 S11: 0.0310 S12: 0.0602 S13: -0.1824 REMARK 3 S21: 0.0252 S22: -0.0267 S23: 0.0596 REMARK 3 S31: -0.2141 S32: -0.0375 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1931 -1.1693 74.7296 REMARK 3 T TENSOR REMARK 3 T11: 0.2382 T22: 0.4615 REMARK 3 T33: 0.2957 T12: -0.0360 REMARK 3 T13: 0.0169 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.6393 L22: 1.1816 REMARK 3 L33: 0.5839 L12: 0.8193 REMARK 3 L13: 0.3771 L23: 0.2560 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: -0.2032 S13: -0.4252 REMARK 3 S21: 0.3269 S22: -0.1706 S23: 0.1774 REMARK 3 S31: 0.1053 S32: 0.0355 S33: -0.0021 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 255 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8225 -10.7256 77.2079 REMARK 3 T TENSOR REMARK 3 T11: 0.2828 T22: 0.4959 REMARK 3 T33: 0.3802 T12: -0.0494 REMARK 3 T13: -0.0299 T23: 0.1251 REMARK 3 L TENSOR REMARK 3 L11: 0.4577 L22: 0.3486 REMARK 3 L33: 0.6637 L12: -0.0263 REMARK 3 L13: 0.4514 L23: -0.3077 REMARK 3 S TENSOR REMARK 3 S11: 0.1525 S12: -0.3266 S13: -0.4099 REMARK 3 S21: -0.0199 S22: 0.0664 S23: 0.0728 REMARK 3 S31: -0.1107 S32: 0.0852 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7908 -35.6150 7.4163 REMARK 3 T TENSOR REMARK 3 T11: 0.3667 T22: 0.4340 REMARK 3 T33: 0.2662 T12: -0.0154 REMARK 3 T13: -0.0313 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.1814 L22: 0.0949 REMARK 3 L33: 0.1624 L12: -0.0451 REMARK 3 L13: -0.0463 L23: 0.0944 REMARK 3 S TENSOR REMARK 3 S11: -0.0498 S12: 0.4469 S13: 0.2069 REMARK 3 S21: 0.1447 S22: 0.0663 S23: 0.1592 REMARK 3 S31: -0.2945 S32: -0.3056 S33: 0.0012 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2087 -26.9516 23.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.1836 T22: 0.1618 REMARK 3 T33: 0.2160 T12: 0.0016 REMARK 3 T13: 0.0077 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.8331 L22: 0.6105 REMARK 3 L33: 0.9092 L12: 0.0623 REMARK 3 L13: 0.6456 L23: 0.5612 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: -0.1542 S13: 0.1232 REMARK 3 S21: 0.1135 S22: -0.0401 S23: 0.2521 REMARK 3 S31: -0.1114 S32: -0.2156 S33: 0.0006 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1655 -31.8005 41.9233 REMARK 3 T TENSOR REMARK 3 T11: 0.2434 T22: 0.2652 REMARK 3 T33: 0.2618 T12: -0.0269 REMARK 3 T13: 0.0096 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 1.9727 L22: 1.1762 REMARK 3 L33: 1.5869 L12: -0.1736 REMARK 3 L13: 0.7282 L23: -0.9453 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: -0.2973 S13: -0.1900 REMARK 3 S21: 0.0721 S22: 0.0779 S23: 0.0128 REMARK 3 S31: 0.0997 S32: 0.0949 S33: -0.0003 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2043 -27.2865 28.7605 REMARK 3 T TENSOR REMARK 3 T11: 0.2036 T22: 0.1348 REMARK 3 T33: 0.2002 T12: -0.0092 REMARK 3 T13: -0.0001 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 2.1984 L22: 1.1913 REMARK 3 L33: 1.8112 L12: 0.3503 REMARK 3 L13: 0.5873 L23: 1.0758 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: -0.1262 S13: -0.0496 REMARK 3 S21: 0.0808 S22: 0.0529 S23: -0.0757 REMARK 3 S31: -0.0472 S32: 0.1769 S33: 0.0009 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 240 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2727 -29.9563 18.6509 REMARK 3 T TENSOR REMARK 3 T11: 0.2220 T22: 0.2484 REMARK 3 T33: 0.3141 T12: -0.0375 REMARK 3 T13: 0.0186 T23: 0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.6715 L22: 0.9954 REMARK 3 L33: 0.7843 L12: -0.4265 REMARK 3 L13: 0.5679 L23: 0.1176 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: 0.3887 S13: -0.0626 REMARK 3 S21: 0.0056 S22: -0.0555 S23: -0.0799 REMARK 3 S31: -0.2549 S32: -0.0533 S33: 0.0005 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0599 -39.5603 16.6621 REMARK 3 T TENSOR REMARK 3 T11: 0.2449 T22: 0.1489 REMARK 3 T33: 0.3058 T12: 0.0053 REMARK 3 T13: -0.0396 T23: -0.0636 REMARK 3 L TENSOR REMARK 3 L11: 2.2156 L22: 0.6786 REMARK 3 L33: 0.1759 L12: 0.3633 REMARK 3 L13: 0.3742 L23: -0.2042 REMARK 3 S TENSOR REMARK 3 S11: 0.0942 S12: 0.5679 S13: -0.3863 REMARK 3 S21: -0.2629 S22: 0.0363 S23: 0.0565 REMARK 3 S31: 0.2946 S32: -0.0256 S33: 0.1274 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 38 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2373 4.4066 35.4110 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.4284 REMARK 3 T33: 0.2756 T12: -0.0032 REMARK 3 T13: -0.0417 T23: -0.0446 REMARK 3 L TENSOR REMARK 3 L11: 0.6092 L22: 0.6198 REMARK 3 L33: 1.2990 L12: 0.0578 REMARK 3 L13: 0.2821 L23: -0.2769 REMARK 3 S TENSOR REMARK 3 S11: -0.0433 S12: -0.6587 S13: -0.0539 REMARK 3 S21: 0.2313 S22: 0.1189 S23: 0.0918 REMARK 3 S31: -0.1881 S32: -0.5025 S33: 0.0297 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1621 -1.3290 23.6155 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2071 REMARK 3 T33: 0.2398 T12: 0.0011 REMARK 3 T13: 0.0012 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 0.4324 L22: 0.8015 REMARK 3 L33: 0.3055 L12: 0.4223 REMARK 3 L13: 0.3628 L23: 0.2843 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.1792 S13: 0.1533 REMARK 3 S21: -0.1448 S22: -0.0240 S23: 0.1567 REMARK 3 S31: 0.1756 S32: -0.2427 S33: -0.0011 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 88 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2889 9.1861 5.7850 REMARK 3 T TENSOR REMARK 3 T11: 0.3167 T22: 0.2999 REMARK 3 T33: 0.2658 T12: -0.0091 REMARK 3 T13: -0.0453 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 1.8214 L22: 0.9738 REMARK 3 L33: 0.3635 L12: 0.4315 REMARK 3 L13: 0.3490 L23: 0.3785 REMARK 3 S TENSOR REMARK 3 S11: -0.2839 S12: 0.2411 S13: 0.3800 REMARK 3 S21: -0.1696 S22: 0.1274 S23: -0.1587 REMARK 3 S31: 0.0705 S32: 0.1777 S33: -0.0008 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 143 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9707 -6.5709 5.1649 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.2421 REMARK 3 T33: 0.2773 T12: 0.0006 REMARK 3 T13: -0.0102 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 1.1489 L22: 0.5751 REMARK 3 L33: 0.3265 L12: 0.1140 REMARK 3 L13: -0.5362 L23: 0.1493 REMARK 3 S TENSOR REMARK 3 S11: -0.1660 S12: 0.7184 S13: -0.3036 REMARK 3 S21: -0.2552 S22: 0.0134 S23: 0.2670 REMARK 3 S31: 0.0079 S32: -0.2742 S33: -0.0067 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 165 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1959 1.1153 18.7794 REMARK 3 T TENSOR REMARK 3 T11: 0.2036 T22: 0.1354 REMARK 3 T33: 0.1835 T12: -0.0055 REMARK 3 T13: -0.0134 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.3486 L22: 1.0162 REMARK 3 L33: 2.1865 L12: 0.0234 REMARK 3 L13: -0.2791 L23: 0.1350 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: 0.1139 S13: 0.1756 REMARK 3 S21: -0.0129 S22: 0.0078 S23: -0.0046 REMARK 3 S31: 0.0343 S32: 0.1948 S33: 0.0001 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 240 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3920 1.6677 27.9445 REMARK 3 T TENSOR REMARK 3 T11: 0.2062 T22: 0.1618 REMARK 3 T33: 0.2980 T12: -0.0079 REMARK 3 T13: -0.0675 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.7030 L22: 0.8200 REMARK 3 L33: 1.0710 L12: 0.2382 REMARK 3 L13: -0.8388 L23: -0.0492 REMARK 3 S TENSOR REMARK 3 S11: -0.5218 S12: -0.0397 S13: 0.6053 REMARK 3 S21: 0.5002 S22: 0.1559 S23: -0.4946 REMARK 3 S31: -0.1042 S32: 0.1578 S33: -0.0290 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 255 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9509 10.7096 31.2688 REMARK 3 T TENSOR REMARK 3 T11: 0.2898 T22: 0.2284 REMARK 3 T33: 0.2603 T12: 0.0127 REMARK 3 T13: -0.0098 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 0.7869 L22: 0.4313 REMARK 3 L33: 0.9962 L12: 0.4854 REMARK 3 L13: -0.4487 L23: -0.0442 REMARK 3 S TENSOR REMARK 3 S11: 0.0192 S12: -0.3514 S13: 0.4878 REMARK 3 S21: 0.0806 S22: -0.1787 S23: -0.0221 REMARK 3 S31: -0.2409 S32: 0.1651 S33: -0.0115 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 36 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6908 26.0971 75.7576 REMARK 3 T TENSOR REMARK 3 T11: 0.3115 T22: 0.3954 REMARK 3 T33: 0.2973 T12: 0.0265 REMARK 3 T13: 0.0315 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.5442 L22: 1.0407 REMARK 3 L33: 1.5788 L12: -0.3940 REMARK 3 L13: 0.7249 L23: 0.9045 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: 0.0299 S13: 0.2538 REMARK 3 S21: 0.1278 S22: -0.0471 S23: -0.0837 REMARK 3 S31: 0.3364 S32: 0.3409 S33: -0.0030 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 106 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8651 47.1196 92.9145 REMARK 3 T TENSOR REMARK 3 T11: 0.8029 T22: 0.6146 REMARK 3 T33: 0.6759 T12: -0.0457 REMARK 3 T13: -0.0806 T23: -0.1067 REMARK 3 L TENSOR REMARK 3 L11: 0.2234 L22: 0.1391 REMARK 3 L33: 0.0319 L12: -0.1771 REMARK 3 L13: 0.0837 L23: -0.0663 REMARK 3 S TENSOR REMARK 3 S11: -1.3337 S12: -0.5318 S13: 0.2760 REMARK 3 S21: -0.8245 S22: -0.0497 S23: -0.0543 REMARK 3 S31: -0.4730 S32: -0.0776 S33: -0.0529 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 118 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4480 31.7562 92.9008 REMARK 3 T TENSOR REMARK 3 T11: 0.3718 T22: 0.4627 REMARK 3 T33: 0.2859 T12: 0.0013 REMARK 3 T13: 0.0736 T23: -0.1009 REMARK 3 L TENSOR REMARK 3 L11: 2.1611 L22: 0.7723 REMARK 3 L33: 0.8704 L12: -0.2448 REMARK 3 L13: 0.7137 L23: 0.6040 REMARK 3 S TENSOR REMARK 3 S11: -0.3975 S12: -0.3534 S13: 0.5493 REMARK 3 S21: 0.1214 S22: 0.0845 S23: -0.3243 REMARK 3 S31: -0.0182 S32: -0.4096 S33: -0.0725 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 155 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8447 26.7811 82.0010 REMARK 3 T TENSOR REMARK 3 T11: 0.3033 T22: 0.3503 REMARK 3 T33: 0.3278 T12: -0.0377 REMARK 3 T13: 0.0271 T23: -0.0482 REMARK 3 L TENSOR REMARK 3 L11: 1.5206 L22: 1.0557 REMARK 3 L33: 2.6984 L12: 0.1048 REMARK 3 L13: -0.8371 L23: -0.5731 REMARK 3 S TENSOR REMARK 3 S11: -0.0575 S12: 0.1632 S13: 0.2960 REMARK 3 S21: 0.1325 S22: -0.0350 S23: 0.1905 REMARK 3 S31: 0.1884 S32: -0.2044 S33: 0.0000 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 240 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5473 31.8726 68.4421 REMARK 3 T TENSOR REMARK 3 T11: 0.3055 T22: 0.4429 REMARK 3 T33: 0.4092 T12: -0.0297 REMARK 3 T13: -0.0035 T23: 0.1030 REMARK 3 L TENSOR REMARK 3 L11: 0.8009 L22: 1.0947 REMARK 3 L33: 1.5693 L12: -0.5376 REMARK 3 L13: -0.7990 L23: 0.0446 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: 0.7287 S13: 0.4655 REMARK 3 S21: -0.3777 S22: -0.0464 S23: 0.3539 REMARK 3 S31: 0.1246 S32: -0.1155 S33: -0.0024 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73634 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 39.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE, 0.1 M TRIS-HCL REMARK 280 PH 8.5, 30% PEG4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.29000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 ILE A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 VAL A 10 REMARK 465 CYS A 11 REMARK 465 LEU A 12 REMARK 465 SER A 13 REMARK 465 ILE A 14 REMARK 465 SER A 15 REMARK 465 ILE A 16 REMARK 465 GLY A 17 REMARK 465 ALA A 18 REMARK 465 CYS A 19 REMARK 465 ALA A 20 REMARK 465 GLU A 21 REMARK 465 HIS A 22 REMARK 465 SER A 23 REMARK 465 MET A 24 REMARK 465 SER A 25 REMARK 465 ARG A 26 REMARK 465 ALA A 27 REMARK 465 LYS A 28 REMARK 465 THR A 29 REMARK 465 SER A 30 REMARK 465 THR A 31 REMARK 465 ILE A 32 REMARK 465 PRO A 33 REMARK 465 GLN A 34 REMARK 465 VAL A 35 REMARK 465 ASN A 36 REMARK 465 ASN A 37 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LEU B 3 REMARK 465 LEU B 4 REMARK 465 LYS B 5 REMARK 465 ILE B 6 REMARK 465 LEU B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 VAL B 10 REMARK 465 CYS B 11 REMARK 465 LEU B 12 REMARK 465 SER B 13 REMARK 465 ILE B 14 REMARK 465 SER B 15 REMARK 465 ILE B 16 REMARK 465 GLY B 17 REMARK 465 ALA B 18 REMARK 465 CYS B 19 REMARK 465 ALA B 20 REMARK 465 GLU B 21 REMARK 465 HIS B 22 REMARK 465 SER B 23 REMARK 465 MET B 24 REMARK 465 SER B 25 REMARK 465 ARG B 26 REMARK 465 ALA B 27 REMARK 465 LYS B 28 REMARK 465 THR B 29 REMARK 465 SER B 30 REMARK 465 THR B 31 REMARK 465 ILE B 32 REMARK 465 PRO B 33 REMARK 465 GLN B 34 REMARK 465 VAL B 35 REMARK 465 ASN B 36 REMARK 465 ASN B 37 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 LEU C 3 REMARK 465 LEU C 4 REMARK 465 LYS C 5 REMARK 465 ILE C 6 REMARK 465 LEU C 7 REMARK 465 SER C 8 REMARK 465 LEU C 9 REMARK 465 VAL C 10 REMARK 465 CYS C 11 REMARK 465 LEU C 12 REMARK 465 SER C 13 REMARK 465 ILE C 14 REMARK 465 SER C 15 REMARK 465 ILE C 16 REMARK 465 GLY C 17 REMARK 465 ALA C 18 REMARK 465 CYS C 19 REMARK 465 ALA C 20 REMARK 465 GLU C 21 REMARK 465 HIS C 22 REMARK 465 SER C 23 REMARK 465 MET C 24 REMARK 465 SER C 25 REMARK 465 ARG C 26 REMARK 465 ALA C 27 REMARK 465 LYS C 28 REMARK 465 THR C 29 REMARK 465 SER C 30 REMARK 465 THR C 31 REMARK 465 ILE C 32 REMARK 465 PRO C 33 REMARK 465 GLN C 34 REMARK 465 VAL C 35 REMARK 465 ASN C 36 REMARK 465 ASN C 37 REMARK 465 MET D 1 REMARK 465 LYS D 2 REMARK 465 LEU D 3 REMARK 465 LEU D 4 REMARK 465 LYS D 5 REMARK 465 ILE D 6 REMARK 465 LEU D 7 REMARK 465 SER D 8 REMARK 465 LEU D 9 REMARK 465 VAL D 10 REMARK 465 CYS D 11 REMARK 465 LEU D 12 REMARK 465 SER D 13 REMARK 465 ILE D 14 REMARK 465 SER D 15 REMARK 465 ILE D 16 REMARK 465 GLY D 17 REMARK 465 ALA D 18 REMARK 465 CYS D 19 REMARK 465 ALA D 20 REMARK 465 GLU D 21 REMARK 465 HIS D 22 REMARK 465 SER D 23 REMARK 465 MET D 24 REMARK 465 SER D 25 REMARK 465 ARG D 26 REMARK 465 ALA D 27 REMARK 465 LYS D 28 REMARK 465 THR D 29 REMARK 465 SER D 30 REMARK 465 THR D 31 REMARK 465 ILE D 32 REMARK 465 PRO D 33 REMARK 465 GLN D 34 REMARK 465 VAL D 35 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 244 CG CD OE1 NE2 REMARK 470 GLN B 244 CG CD OE1 NE2 REMARK 470 GLN C 244 CG CD OE1 NE2 REMARK 470 GLN D 244 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 83 O7 Y33 A 301 1.98 REMARK 500 OG SER C 83 O7 Y33 C 301 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP D 242 CB - CA - C ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 82 -137.70 44.40 REMARK 500 VAL A 209 -61.99 -96.92 REMARK 500 GLN B 63 -51.33 -124.99 REMARK 500 ALA B 82 -138.38 50.10 REMARK 500 LYS B 171 17.05 -140.69 REMARK 500 VAL B 209 -65.97 -108.62 REMARK 500 GLN C 63 -51.80 -121.71 REMARK 500 ALA C 82 -138.56 44.65 REMARK 500 ALA D 82 -137.66 48.87 REMARK 500 ASP D 118 38.16 -84.88 REMARK 500 ALA D 241 -101.30 -1.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 211 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9D78 RELATED DB: PDB DBREF 9D79 A 1 280 UNP Q2TR58 Q2TR58_ACIBA 1 280 DBREF 9D79 B 1 280 UNP Q2TR58 Q2TR58_ACIBA 1 280 DBREF 9D79 C 1 280 UNP Q2TR58 Q2TR58_ACIBA 1 280 DBREF 9D79 D 1 280 UNP Q2TR58 Q2TR58_ACIBA 1 280 SEQRES 1 A 280 MET LYS LEU LEU LYS ILE LEU SER LEU VAL CYS LEU SER SEQRES 2 A 280 ILE SER ILE GLY ALA CYS ALA GLU HIS SER MET SER ARG SEQRES 3 A 280 ALA LYS THR SER THR ILE PRO GLN VAL ASN ASN SER ILE SEQRES 4 A 280 ILE ASP GLN ASN VAL GLN ALA LEU PHE ASN GLU ILE SER SEQRES 5 A 280 ALA ASP ALA VAL PHE VAL THR TYR ASP GLY GLN ASN ILE SEQRES 6 A 280 LYS LYS TYR GLY THR HIS LEU ASP ARG ALA LYS THR ALA SEQRES 7 A 280 TYR ILE PRO ALA SER THR PHE KCX ILE ALA ASN ALA LEU SEQRES 8 A 280 ILE GLY LEU GLU ASN HIS LYS ALA THR SER THR GLU ILE SEQRES 9 A 280 PHE LYS TRP ASP GLY LYS PRO ARG PHE PHE LYS ALA TRP SEQRES 10 A 280 ASP LYS ASP PHE THR LEU GLY GLU ALA MET GLN ALA SER SEQRES 11 A 280 THR VAL PRO VAL TYR GLN GLU LEU ALA ARG ARG ILE GLY SEQRES 12 A 280 PRO SER LEU MET GLN SER GLU LEU GLN ARG ILE GLY TYR SEQRES 13 A 280 GLY ASN MET GLN ILE GLY THR GLU VAL ASP GLN PHE TRP SEQRES 14 A 280 LEU LYS GLY PRO LEU THR ILE THR PRO ILE GLN GLU VAL SEQRES 15 A 280 LYS PHE VAL TYR ASP LEU ALA GLN GLY GLN LEU PRO PHE SEQRES 16 A 280 LYS PRO GLU VAL GLN GLN GLN VAL LYS GLU MET LEU TYR SEQRES 17 A 280 VAL GLU ARG ARG GLY GLU ASN ARG LEU TYR ALA LYS SER SEQRES 18 A 280 GLY TRP GLY MET ALA VAL ASP PRO GLN VAL GLY TRP TYR SEQRES 19 A 280 VAL GLY PHE VAL GLU LYS ALA ASP GLY GLN VAL VAL ALA SEQRES 20 A 280 PHE ALA LEU ASN MET GLN MET LYS ALA GLY ASP ASP ILE SEQRES 21 A 280 ALA LEU ARG LYS GLN LEU SER LEU ASP VAL LEU ASP LYS SEQRES 22 A 280 LEU GLY VAL PHE HIS TYR LEU SEQRES 1 B 280 MET LYS LEU LEU LYS ILE LEU SER LEU VAL CYS LEU SER SEQRES 2 B 280 ILE SER ILE GLY ALA CYS ALA GLU HIS SER MET SER ARG SEQRES 3 B 280 ALA LYS THR SER THR ILE PRO GLN VAL ASN ASN SER ILE SEQRES 4 B 280 ILE ASP GLN ASN VAL GLN ALA LEU PHE ASN GLU ILE SER SEQRES 5 B 280 ALA ASP ALA VAL PHE VAL THR TYR ASP GLY GLN ASN ILE SEQRES 6 B 280 LYS LYS TYR GLY THR HIS LEU ASP ARG ALA LYS THR ALA SEQRES 7 B 280 TYR ILE PRO ALA SER THR PHE KCX ILE ALA ASN ALA LEU SEQRES 8 B 280 ILE GLY LEU GLU ASN HIS LYS ALA THR SER THR GLU ILE SEQRES 9 B 280 PHE LYS TRP ASP GLY LYS PRO ARG PHE PHE LYS ALA TRP SEQRES 10 B 280 ASP LYS ASP PHE THR LEU GLY GLU ALA MET GLN ALA SER SEQRES 11 B 280 THR VAL PRO VAL TYR GLN GLU LEU ALA ARG ARG ILE GLY SEQRES 12 B 280 PRO SER LEU MET GLN SER GLU LEU GLN ARG ILE GLY TYR SEQRES 13 B 280 GLY ASN MET GLN ILE GLY THR GLU VAL ASP GLN PHE TRP SEQRES 14 B 280 LEU LYS GLY PRO LEU THR ILE THR PRO ILE GLN GLU VAL SEQRES 15 B 280 LYS PHE VAL TYR ASP LEU ALA GLN GLY GLN LEU PRO PHE SEQRES 16 B 280 LYS PRO GLU VAL GLN GLN GLN VAL LYS GLU MET LEU TYR SEQRES 17 B 280 VAL GLU ARG ARG GLY GLU ASN ARG LEU TYR ALA LYS SER SEQRES 18 B 280 GLY TRP GLY MET ALA VAL ASP PRO GLN VAL GLY TRP TYR SEQRES 19 B 280 VAL GLY PHE VAL GLU LYS ALA ASP GLY GLN VAL VAL ALA SEQRES 20 B 280 PHE ALA LEU ASN MET GLN MET LYS ALA GLY ASP ASP ILE SEQRES 21 B 280 ALA LEU ARG LYS GLN LEU SER LEU ASP VAL LEU ASP LYS SEQRES 22 B 280 LEU GLY VAL PHE HIS TYR LEU SEQRES 1 C 280 MET LYS LEU LEU LYS ILE LEU SER LEU VAL CYS LEU SER SEQRES 2 C 280 ILE SER ILE GLY ALA CYS ALA GLU HIS SER MET SER ARG SEQRES 3 C 280 ALA LYS THR SER THR ILE PRO GLN VAL ASN ASN SER ILE SEQRES 4 C 280 ILE ASP GLN ASN VAL GLN ALA LEU PHE ASN GLU ILE SER SEQRES 5 C 280 ALA ASP ALA VAL PHE VAL THR TYR ASP GLY GLN ASN ILE SEQRES 6 C 280 LYS LYS TYR GLY THR HIS LEU ASP ARG ALA LYS THR ALA SEQRES 7 C 280 TYR ILE PRO ALA SER THR PHE KCX ILE ALA ASN ALA LEU SEQRES 8 C 280 ILE GLY LEU GLU ASN HIS LYS ALA THR SER THR GLU ILE SEQRES 9 C 280 PHE LYS TRP ASP GLY LYS PRO ARG PHE PHE LYS ALA TRP SEQRES 10 C 280 ASP LYS ASP PHE THR LEU GLY GLU ALA MET GLN ALA SER SEQRES 11 C 280 THR VAL PRO VAL TYR GLN GLU LEU ALA ARG ARG ILE GLY SEQRES 12 C 280 PRO SER LEU MET GLN SER GLU LEU GLN ARG ILE GLY TYR SEQRES 13 C 280 GLY ASN MET GLN ILE GLY THR GLU VAL ASP GLN PHE TRP SEQRES 14 C 280 LEU LYS GLY PRO LEU THR ILE THR PRO ILE GLN GLU VAL SEQRES 15 C 280 LYS PHE VAL TYR ASP LEU ALA GLN GLY GLN LEU PRO PHE SEQRES 16 C 280 LYS PRO GLU VAL GLN GLN GLN VAL LYS GLU MET LEU TYR SEQRES 17 C 280 VAL GLU ARG ARG GLY GLU ASN ARG LEU TYR ALA LYS SER SEQRES 18 C 280 GLY TRP GLY MET ALA VAL ASP PRO GLN VAL GLY TRP TYR SEQRES 19 C 280 VAL GLY PHE VAL GLU LYS ALA ASP GLY GLN VAL VAL ALA SEQRES 20 C 280 PHE ALA LEU ASN MET GLN MET LYS ALA GLY ASP ASP ILE SEQRES 21 C 280 ALA LEU ARG LYS GLN LEU SER LEU ASP VAL LEU ASP LYS SEQRES 22 C 280 LEU GLY VAL PHE HIS TYR LEU SEQRES 1 D 280 MET LYS LEU LEU LYS ILE LEU SER LEU VAL CYS LEU SER SEQRES 2 D 280 ILE SER ILE GLY ALA CYS ALA GLU HIS SER MET SER ARG SEQRES 3 D 280 ALA LYS THR SER THR ILE PRO GLN VAL ASN ASN SER ILE SEQRES 4 D 280 ILE ASP GLN ASN VAL GLN ALA LEU PHE ASN GLU ILE SER SEQRES 5 D 280 ALA ASP ALA VAL PHE VAL THR TYR ASP GLY GLN ASN ILE SEQRES 6 D 280 LYS LYS TYR GLY THR HIS LEU ASP ARG ALA LYS THR ALA SEQRES 7 D 280 TYR ILE PRO ALA SER THR PHE KCX ILE ALA ASN ALA LEU SEQRES 8 D 280 ILE GLY LEU GLU ASN HIS LYS ALA THR SER THR GLU ILE SEQRES 9 D 280 PHE LYS TRP ASP GLY LYS PRO ARG PHE PHE LYS ALA TRP SEQRES 10 D 280 ASP LYS ASP PHE THR LEU GLY GLU ALA MET GLN ALA SER SEQRES 11 D 280 THR VAL PRO VAL TYR GLN GLU LEU ALA ARG ARG ILE GLY SEQRES 12 D 280 PRO SER LEU MET GLN SER GLU LEU GLN ARG ILE GLY TYR SEQRES 13 D 280 GLY ASN MET GLN ILE GLY THR GLU VAL ASP GLN PHE TRP SEQRES 14 D 280 LEU LYS GLY PRO LEU THR ILE THR PRO ILE GLN GLU VAL SEQRES 15 D 280 LYS PHE VAL TYR ASP LEU ALA GLN GLY GLN LEU PRO PHE SEQRES 16 D 280 LYS PRO GLU VAL GLN GLN GLN VAL LYS GLU MET LEU TYR SEQRES 17 D 280 VAL GLU ARG ARG GLY GLU ASN ARG LEU TYR ALA LYS SER SEQRES 18 D 280 GLY TRP GLY MET ALA VAL ASP PRO GLN VAL GLY TRP TYR SEQRES 19 D 280 VAL GLY PHE VAL GLU LYS ALA ASP GLY GLN VAL VAL ALA SEQRES 20 D 280 PHE ALA LEU ASN MET GLN MET LYS ALA GLY ASP ASP ILE SEQRES 21 D 280 ALA LEU ARG LYS GLN LEU SER LEU ASP VAL LEU ASP LYS SEQRES 22 D 280 LEU GLY VAL PHE HIS TYR LEU MODRES 9D79 KCX A 86 LYS MODIFIED RESIDUE MODRES 9D79 KCX B 86 LYS MODIFIED RESIDUE MODRES 9D79 KCX C 86 LYS MODIFIED RESIDUE MODRES 9D79 KCX D 86 LYS MODIFIED RESIDUE HET KCX A 86 12 HET KCX B 86 12 HET KCX C 86 12 HET KCX D 86 12 HET Y33 A 301 26 HET Y33 B 301 26 HET GOL B 302 6 HET Y33 C 301 26 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM Y33 (5R)-3-{[(3S,5S)-5-(DIMETHYLCARBAMOYL)PYRROLIDIN-3- HETNAM 2 Y33 YL]SULFANYL}-5-[(2S,3R)-3-HYDROXY-1-OXOBUTAN-2-YL]-5- HETNAM 3 Y33 METHYL-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 KCX 4(C7 H14 N2 O4) FORMUL 5 Y33 3(C17 H27 N3 O6 S) FORMUL 7 GOL C3 H8 O3 FORMUL 9 HOH *198(H2 O) HELIX 1 AA1 SER A 38 ASN A 49 1 12 HELIX 2 AA2 HIS A 71 THR A 77 5 7 HELIX 3 AA3 PRO A 81 THR A 84 5 4 HELIX 4 AA4 PHE A 85 ASN A 96 1 12 HELIX 5 AA5 PHE A 114 ASP A 118 5 5 HELIX 6 AA6 THR A 122 ALA A 129 1 8 HELIX 7 AA7 THR A 131 GLY A 143 1 13 HELIX 8 AA8 GLY A 143 GLY A 155 1 13 HELIX 9 AA9 GLN A 167 GLY A 172 1 6 HELIX 10 AB1 THR A 177 GLY A 191 1 15 HELIX 11 AB2 LYS A 196 LEU A 207 1 12 HELIX 12 AB3 ALA A 261 LEU A 274 1 14 HELIX 13 AB4 ILE B 39 PHE B 48 1 10 HELIX 14 AB5 ASN B 49 ILE B 51 5 3 HELIX 15 AB6 HIS B 71 THR B 77 5 7 HELIX 16 AB7 PRO B 81 SER B 83 5 3 HELIX 17 AB8 THR B 84 ASN B 96 1 13 HELIX 18 AB9 PHE B 114 ASP B 118 5 5 HELIX 19 AC1 LEU B 123 SER B 130 1 8 HELIX 20 AC2 THR B 131 GLY B 143 1 13 HELIX 21 AC3 GLY B 143 GLY B 155 1 13 HELIX 22 AC4 GLN B 167 GLY B 172 1 6 HELIX 23 AC5 THR B 177 GLY B 191 1 15 HELIX 24 AC6 LYS B 196 LEU B 207 1 12 HELIX 25 AC7 ALA B 261 LEU B 274 1 14 HELIX 26 AC8 ILE C 39 ASN C 49 1 11 HELIX 27 AC9 HIS C 71 THR C 77 5 7 HELIX 28 AD1 PRO C 81 THR C 84 5 4 HELIX 29 AD2 PHE C 85 ASN C 96 1 12 HELIX 30 AD3 PHE C 114 ASP C 118 5 5 HELIX 31 AD4 THR C 122 SER C 130 1 9 HELIX 32 AD5 THR C 131 GLY C 155 1 25 HELIX 33 AD6 GLN C 167 GLY C 172 1 6 HELIX 34 AD7 THR C 177 GLN C 190 1 14 HELIX 35 AD8 LYS C 196 LEU C 207 1 12 HELIX 36 AD9 ALA C 261 LEU C 274 1 14 HELIX 37 AE1 ASN D 37 LEU D 47 1 11 HELIX 38 AE2 HIS D 71 THR D 77 5 7 HELIX 39 AE3 PRO D 81 THR D 84 5 4 HELIX 40 AE4 PHE D 85 ASN D 96 1 12 HELIX 41 AE5 PHE D 114 ASP D 118 5 5 HELIX 42 AE6 THR D 122 SER D 130 1 9 HELIX 43 AE7 THR D 131 GLY D 155 1 25 HELIX 44 AE8 GLN D 167 GLY D 172 1 6 HELIX 45 AE9 THR D 177 GLY D 191 1 15 HELIX 46 AF1 LYS D 196 LEU D 207 1 12 HELIX 47 AF2 ALA D 261 LEU D 274 1 14 SHEET 1 AA1 6 ILE A 65 GLY A 69 0 SHEET 2 AA1 6 ALA A 55 TYR A 60 -1 N THR A 59 O LYS A 66 SHEET 3 AA1 6 VAL A 245 MET A 254 -1 O ALA A 247 N TYR A 60 SHEET 4 AA1 6 GLN A 230 GLU A 239 -1 N GLY A 232 O MET A 252 SHEET 5 AA1 6 ASN A 215 GLY A 224 -1 N ARG A 216 O GLU A 239 SHEET 6 AA1 6 TYR A 208 ARG A 212 -1 N GLU A 210 O LEU A 217 SHEET 1 AA2 6 ILE B 65 GLY B 69 0 SHEET 2 AA2 6 ALA B 55 TYR B 60 -1 N PHE B 57 O TYR B 68 SHEET 3 AA2 6 VAL B 245 MET B 254 -1 O ALA B 247 N TYR B 60 SHEET 4 AA2 6 GLN B 230 GLU B 239 -1 N TYR B 234 O LEU B 250 SHEET 5 AA2 6 ASN B 215 GLY B 224 -1 N GLY B 222 O TRP B 233 SHEET 6 AA2 6 TYR B 208 ARG B 212 -1 N GLU B 210 O LEU B 217 SHEET 1 AA3 2 ILE B 104 PHE B 105 0 SHEET 2 AA3 2 PHE B 121 THR B 122 -1 O PHE B 121 N PHE B 105 SHEET 1 AA4 6 ILE C 65 GLY C 69 0 SHEET 2 AA4 6 ALA C 55 TYR C 60 -1 N PHE C 57 O TYR C 68 SHEET 3 AA4 6 VAL C 245 MET C 254 -1 O ALA C 247 N TYR C 60 SHEET 4 AA4 6 GLN C 230 GLU C 239 -1 N TYR C 234 O LEU C 250 SHEET 5 AA4 6 ASN C 215 GLY C 224 -1 N ARG C 216 O GLU C 239 SHEET 6 AA4 6 TYR C 208 ARG C 212 -1 N GLU C 210 O LEU C 217 SHEET 1 AA5 6 ILE D 65 GLY D 69 0 SHEET 2 AA5 6 ALA D 55 TYR D 60 -1 N PHE D 57 O TYR D 68 SHEET 3 AA5 6 VAL D 245 GLN D 253 -1 O ALA D 247 N TYR D 60 SHEET 4 AA5 6 VAL D 231 GLU D 239 -1 N TYR D 234 O LEU D 250 SHEET 5 AA5 6 ASN D 215 GLY D 224 -1 N GLY D 222 O TRP D 233 SHEET 6 AA5 6 TYR D 208 ARG D 212 -1 N VAL D 209 O LEU D 217 LINK OG SER A 83 C7 Y33 A 301 1555 1555 1.45 LINK C PHE A 85 N KCX A 86 1555 1555 1.32 LINK C KCX A 86 N ILE A 87 1555 1555 1.34 LINK OG SER B 83 C7 Y33 B 301 1555 1555 1.46 LINK C PHE B 85 N KCX B 86 1555 1555 1.33 LINK C KCX B 86 N ILE B 87 1555 1555 1.33 LINK OG SER C 83 C7 Y33 C 301 1555 1555 1.44 LINK C PHE C 85 N KCX C 86 1555 1555 1.33 LINK C KCX C 86 N ILE C 87 1555 1555 1.34 LINK C PHE D 85 N KCX D 86 1555 1555 1.33 LINK C KCX D 86 N ILE D 87 1555 1555 1.33 CISPEP 1 GLY A 172 PRO A 173 0 10.35 CISPEP 2 ASP A 228 PRO A 229 0 0.02 CISPEP 3 GLY B 172 PRO B 173 0 9.27 CISPEP 4 ASP B 228 PRO B 229 0 -7.81 CISPEP 5 GLY C 172 PRO C 173 0 12.07 CISPEP 6 ASP C 228 PRO C 229 0 -5.38 CISPEP 7 GLY D 172 PRO D 173 0 11.15 CISPEP 8 ASP D 228 PRO D 229 0 -3.26 CRYST1 37.081 66.580 193.165 90.00 91.13 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026968 0.000000 0.000531 0.00000 SCALE2 0.000000 0.015020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005178 0.00000