HEADER OXIDOREDUCTASE 26-AUG-24 9DCG TITLE CRYSTAL STRUCTURE OF THE THIOL:DISULFIDE INTERCHANGE PROTEIN DSBC FROM TITLE 2 VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR STR. N16961; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 GENE: VC_2418; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS THIOL:DISULFIDE INTERCHANGE PROTEIN, THIOREDOXIB FOLD, CSBID, KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS KEYWDS 3 DISEASES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,S.SHATSMAN,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 BIOLOGY OF INFECTIOUS DISEASES (CSBID) REVDAT 1 04-SEP-24 9DCG 0 JRNL AUTH Y.KIM,N.MALTSEVA,S.SHATSMAN,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES (CSBID) JRNL TITL CRYSTAL STRUCTURE OF THE THIOL:DISULFIDE INTERCHANGE PROTEIN JRNL TITL 2 DSBC FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 14214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8700 - 3.5700 0.97 2915 174 0.1762 0.2132 REMARK 3 2 3.5700 - 2.8400 0.98 2948 156 0.2149 0.2560 REMARK 3 3 2.8400 - 2.4800 0.96 2874 146 0.2511 0.3051 REMARK 3 4 2.4800 - 2.2500 0.84 2550 144 0.2716 0.3308 REMARK 3 5 2.2500 - 2.0900 0.74 2186 121 0.2576 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.288 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.998 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 2280 REMARK 3 ANGLE : 0.402 3091 REMARK 3 CHIRALITY : 0.039 340 REMARK 3 PLANARITY : 0.004 406 REMARK 3 DIHEDRAL : 13.091 853 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7548 25.3357 16.4117 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.5051 REMARK 3 T33: 0.3664 T12: -0.0358 REMARK 3 T13: -0.1573 T23: 0.2047 REMARK 3 L TENSOR REMARK 3 L11: 1.4578 L22: 0.3307 REMARK 3 L33: 0.4682 L12: -0.0813 REMARK 3 L13: 0.3439 L23: 0.0306 REMARK 3 S TENSOR REMARK 3 S11: 0.0820 S12: 0.2534 S13: 0.0132 REMARK 3 S21: -0.3053 S22: 0.0561 S23: 0.4125 REMARK 3 S31: 0.1092 S32: -0.2043 S33: 0.2533 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 166 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1469 15.2244 18.6196 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.5096 REMARK 3 T33: 0.3667 T12: -0.0827 REMARK 3 T13: -0.1175 T23: 0.1496 REMARK 3 L TENSOR REMARK 3 L11: 3.1834 L22: 1.5046 REMARK 3 L33: 0.7700 L12: 0.1466 REMARK 3 L13: -0.2246 L23: -0.2614 REMARK 3 S TENSOR REMARK 3 S11: -0.2073 S12: 0.0849 S13: -0.1338 REMARK 3 S21: -0.1629 S22: 0.0459 S23: 0.2439 REMARK 3 S31: 0.0578 S32: -0.0360 S33: -0.3022 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 182 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1189 14.2811 17.0107 REMARK 3 T TENSOR REMARK 3 T11: 0.3118 T22: 0.5649 REMARK 3 T33: 0.6749 T12: -0.1441 REMARK 3 T13: 0.1293 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 7.5073 L22: 0.3305 REMARK 3 L33: 6.9805 L12: 1.1675 REMARK 3 L13: -3.0438 L23: 0.4516 REMARK 3 S TENSOR REMARK 3 S11: -0.4778 S12: 0.6293 S13: -0.3528 REMARK 3 S21: -0.7396 S22: 0.3271 S23: -0.6146 REMARK 3 S31: 0.0504 S32: 0.5354 S33: -0.0060 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7701 10.7749 15.6073 REMARK 3 T TENSOR REMARK 3 T11: 0.4127 T22: 0.2715 REMARK 3 T33: 0.3575 T12: -0.1418 REMARK 3 T13: 0.0819 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 6.4091 L22: 4.9478 REMARK 3 L33: 1.9939 L12: -1.1149 REMARK 3 L13: 0.2544 L23: 1.7083 REMARK 3 S TENSOR REMARK 3 S11: -0.6580 S12: 0.2142 S13: -0.9297 REMARK 3 S21: -0.4117 S22: 0.5744 S23: -0.0746 REMARK 3 S31: 0.1255 S32: 0.0240 S33: 0.0377 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 201 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7841 24.5748 20.5741 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.4940 REMARK 3 T33: 0.3978 T12: -0.0913 REMARK 3 T13: -0.0203 T23: 0.2745 REMARK 3 L TENSOR REMARK 3 L11: 2.7099 L22: 1.6929 REMARK 3 L33: 0.8722 L12: 1.1144 REMARK 3 L13: 0.5744 L23: 0.1371 REMARK 3 S TENSOR REMARK 3 S11: -0.1358 S12: -0.0004 S13: 0.2977 REMARK 3 S21: -0.0171 S22: 0.0246 S23: 0.3435 REMARK 3 S31: -0.1119 S32: 0.0545 S33: -0.1391 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 215 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6091 34.5028 15.1851 REMARK 3 T TENSOR REMARK 3 T11: 0.2205 T22: 0.4888 REMARK 3 T33: 0.3783 T12: -0.1113 REMARK 3 T13: -0.0409 T23: 0.2115 REMARK 3 L TENSOR REMARK 3 L11: 4.5179 L22: 0.7404 REMARK 3 L33: 1.2747 L12: 1.4073 REMARK 3 L13: -0.3911 L23: 0.4768 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: 0.0335 S13: 0.7290 REMARK 3 S21: -0.1456 S22: 0.0754 S23: 0.4419 REMARK 3 S31: -0.2061 S32: -0.4579 S33: -0.5673 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 239 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6192 36.1800 17.8371 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.5476 REMARK 3 T33: 0.2354 T12: -0.1429 REMARK 3 T13: 0.0251 T23: 0.1601 REMARK 3 L TENSOR REMARK 3 L11: 6.2107 L22: 1.9156 REMARK 3 L33: 0.1945 L12: 1.8651 REMARK 3 L13: 0.6168 L23: 0.0550 REMARK 3 S TENSOR REMARK 3 S11: 0.1979 S12: -0.5701 S13: 0.5112 REMARK 3 S21: 0.1557 S22: -0.1603 S23: 0.0776 REMARK 3 S31: -0.1011 S32: -0.1028 S33: -0.6528 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6076 -8.8800 4.6555 REMARK 3 T TENSOR REMARK 3 T11: 0.1166 T22: 0.5382 REMARK 3 T33: 0.3421 T12: -0.0507 REMARK 3 T13: 0.0520 T23: 0.1061 REMARK 3 L TENSOR REMARK 3 L11: 4.5692 L22: 2.5001 REMARK 3 L33: 1.8580 L12: 1.4973 REMARK 3 L13: -0.6145 L23: 0.2347 REMARK 3 S TENSOR REMARK 3 S11: -0.2221 S12: 0.1964 S13: -0.8363 REMARK 3 S21: -0.0125 S22: 0.2265 S23: -0.4678 REMARK 3 S31: -0.0054 S32: 0.5078 S33: 0.1519 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7210 -0.3179 -2.7100 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.3635 REMARK 3 T33: 0.1776 T12: -0.0922 REMARK 3 T13: -0.0370 T23: 0.1056 REMARK 3 L TENSOR REMARK 3 L11: 1.8607 L22: 2.1010 REMARK 3 L33: 1.3840 L12: 0.8094 REMARK 3 L13: 0.2203 L23: 0.2466 REMARK 3 S TENSOR REMARK 3 S11: -0.2266 S12: 0.1231 S13: 0.3035 REMARK 3 S21: -0.2551 S22: 0.1907 S23: -0.0455 REMARK 3 S31: -0.1000 S32: 0.2556 S33: 0.1150 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 134 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1900 3.5576 0.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.3892 REMARK 3 T33: 0.3606 T12: -0.0589 REMARK 3 T13: -0.1602 T23: 0.1336 REMARK 3 L TENSOR REMARK 3 L11: 1.6019 L22: 0.9620 REMARK 3 L33: 0.6558 L12: 0.6488 REMARK 3 L13: 0.1662 L23: 0.2196 REMARK 3 S TENSOR REMARK 3 S11: -0.1864 S12: -0.0008 S13: 0.3313 REMARK 3 S21: -0.1213 S22: -0.0192 S23: 0.3133 REMARK 3 S31: -0.1396 S32: -0.2434 S33: -0.0688 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6930 -4.7948 0.8731 REMARK 3 T TENSOR REMARK 3 T11: 0.1190 T22: 0.3793 REMARK 3 T33: 0.1253 T12: -0.1356 REMARK 3 T13: 0.0421 T23: 0.1104 REMARK 3 L TENSOR REMARK 3 L11: 3.9658 L22: 0.6681 REMARK 3 L33: 0.3201 L12: 0.2187 REMARK 3 L13: -0.5857 L23: 0.0865 REMARK 3 S TENSOR REMARK 3 S11: 0.2349 S12: -0.1448 S13: 0.1237 REMARK 3 S21: -0.0312 S22: -0.0263 S23: -0.0593 REMARK 3 S31: 0.0623 S32: -0.0816 S33: 0.1975 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6963 5.0935 4.3991 REMARK 3 T TENSOR REMARK 3 T11: -0.1945 T22: 0.7942 REMARK 3 T33: 0.2433 T12: -0.3977 REMARK 3 T13: 0.1313 T23: 0.2096 REMARK 3 L TENSOR REMARK 3 L11: 0.3116 L22: 0.1329 REMARK 3 L33: 0.3390 L12: 0.1148 REMARK 3 L13: -0.1027 L23: -0.0765 REMARK 3 S TENSOR REMARK 3 S11: -0.0525 S12: 0.1747 S13: 0.2377 REMARK 3 S21: -0.1287 S22: -0.0595 S23: -0.1201 REMARK 3 S31: -0.1567 S32: 0.2051 S33: -0.4341 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9878 6.2533 7.9561 REMARK 3 T TENSOR REMARK 3 T11: 0.1981 T22: 0.6020 REMARK 3 T33: 0.4586 T12: -0.1142 REMARK 3 T13: 0.0534 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 7.8537 L22: 5.0913 REMARK 3 L33: 3.2815 L12: 0.5620 REMARK 3 L13: 1.2985 L23: -2.3374 REMARK 3 S TENSOR REMARK 3 S11: -0.0686 S12: 0.2174 S13: -0.0356 REMARK 3 S21: -0.0951 S22: -0.0188 S23: -0.0662 REMARK 3 S31: -0.0329 S32: -0.2887 S33: 0.1375 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5588 9.4425 10.3095 REMARK 3 T TENSOR REMARK 3 T11: 0.2116 T22: 0.4624 REMARK 3 T33: 0.2708 T12: -0.0844 REMARK 3 T13: -0.0026 T23: 0.1199 REMARK 3 L TENSOR REMARK 3 L11: 2.5460 L22: 4.3879 REMARK 3 L33: 2.6549 L12: 0.7682 REMARK 3 L13: 1.0431 L23: 1.7985 REMARK 3 S TENSOR REMARK 3 S11: -0.1255 S12: -0.6299 S13: -0.0817 REMARK 3 S21: 0.3995 S22: -0.1497 S23: 0.3061 REMARK 3 S31: -0.0375 S32: 0.0661 S33: 0.1759 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1601 -2.5122 0.0250 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.6213 REMARK 3 T33: 0.3482 T12: -0.1157 REMARK 3 T13: 0.0430 T23: 0.0792 REMARK 3 L TENSOR REMARK 3 L11: 4.3117 L22: 1.6262 REMARK 3 L33: 1.3258 L12: 1.0857 REMARK 3 L13: -0.3930 L23: 0.2117 REMARK 3 S TENSOR REMARK 3 S11: -0.1966 S12: 0.4171 S13: -0.1036 REMARK 3 S21: -0.1667 S22: 0.1730 S23: -0.1286 REMARK 3 S31: 0.0333 S32: 0.1500 S33: -0.0674 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9065 -0.7520 -9.2194 REMARK 3 T TENSOR REMARK 3 T11: 0.2644 T22: 0.5002 REMARK 3 T33: 0.2420 T12: -0.0672 REMARK 3 T13: -0.0377 T23: 0.1660 REMARK 3 L TENSOR REMARK 3 L11: 5.5552 L22: 7.1653 REMARK 3 L33: 0.7680 L12: -0.4241 REMARK 3 L13: 0.1592 L23: 0.8607 REMARK 3 S TENSOR REMARK 3 S11: -0.1965 S12: 0.6021 S13: 0.0708 REMARK 3 S21: -0.6644 S22: -0.1175 S23: -0.4928 REMARK 3 S31: -0.2045 S32: 0.6453 S33: 0.0569 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1840 -4.3460 -9.9379 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.5207 REMARK 3 T33: 0.1224 T12: -0.0526 REMARK 3 T13: -0.1113 T23: 0.0899 REMARK 3 L TENSOR REMARK 3 L11: 4.0175 L22: 3.2757 REMARK 3 L33: 1.4014 L12: -1.9098 REMARK 3 L13: 1.3497 L23: -1.9007 REMARK 3 S TENSOR REMARK 3 S11: 0.2259 S12: 0.5491 S13: -0.2326 REMARK 3 S21: -0.3801 S22: -0.2417 S23: -0.1028 REMARK 3 S31: 0.2133 S32: 0.5760 S33: -0.3227 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3404 -6.6542 -9.4527 REMARK 3 T TENSOR REMARK 3 T11: 0.1816 T22: 0.5228 REMARK 3 T33: 0.2564 T12: -0.1056 REMARK 3 T13: -0.0113 T23: 0.1138 REMARK 3 L TENSOR REMARK 3 L11: 8.5803 L22: 4.8545 REMARK 3 L33: 2.6050 L12: 2.7009 REMARK 3 L13: -1.6751 L23: -0.5744 REMARK 3 S TENSOR REMARK 3 S11: -0.3398 S12: 0.6644 S13: -0.6374 REMARK 3 S21: -0.3855 S22: 0.2235 S23: -0.2655 REMARK 3 S31: 0.2579 S32: -0.0377 S33: 0.3244 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9416 25.4920 27.5929 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.4184 REMARK 3 T33: 0.2097 T12: -0.0057 REMARK 3 T13: 0.0481 T23: 0.0999 REMARK 3 L TENSOR REMARK 3 L11: 6.8535 L22: 3.9243 REMARK 3 L33: 2.8759 L12: 2.1646 REMARK 3 L13: 2.6992 L23: -0.3280 REMARK 3 S TENSOR REMARK 3 S11: 0.1617 S12: -0.7527 S13: 0.5199 REMARK 3 S21: 0.3280 S22: 0.2374 S23: 0.7128 REMARK 3 S31: -0.3630 S32: -0.6955 S33: -0.0495 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0057 26.9930 16.4522 REMARK 3 T TENSOR REMARK 3 T11: 0.2061 T22: 0.3973 REMARK 3 T33: 0.2677 T12: -0.1279 REMARK 3 T13: -0.0982 T23: 0.1341 REMARK 3 L TENSOR REMARK 3 L11: 3.0828 L22: 1.7649 REMARK 3 L33: 1.2338 L12: 1.0115 REMARK 3 L13: 0.6567 L23: 0.8337 REMARK 3 S TENSOR REMARK 3 S11: -0.1775 S12: 0.2944 S13: -0.1545 REMARK 3 S21: -0.2249 S22: 0.1305 S23: 0.2483 REMARK 3 S31: -0.0350 S32: 0.0364 S33: 0.1804 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 134 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9589 22.7123 15.0107 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.5420 REMARK 3 T33: 0.3258 T12: -0.1525 REMARK 3 T13: -0.0015 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 1.6320 L22: 0.5822 REMARK 3 L33: 0.6809 L12: 0.3978 REMARK 3 L13: 0.5970 L23: 0.2016 REMARK 3 S TENSOR REMARK 3 S11: -0.1817 S12: 0.2493 S13: -0.2733 REMARK 3 S21: -0.0622 S22: 0.0400 S23: -0.1360 REMARK 3 S31: 0.0650 S32: 0.1353 S33: 0.0279 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DCG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14253 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.16800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.16800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M LITHIUM SULFATE, 150 MM REMARK 280 CACODYLATE PH 6.5, 1.0 % V/V 1,2 PROPANEDIOL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 158 81.68 -154.05 REMARK 500 TYR B 158 79.92 -153.96 REMARK 500 PRO B 163 48.02 -84.34 REMARK 500 GLN B 164 -34.03 -149.66 REMARK 500 LYS B 198 -168.96 -116.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01458 RELATED DB: TARGETTRACK DBREF 9DCG A 110 250 UNP Q9KPF0 Q9KPF0_VIBCH 110 250 DBREF 9DCG B 110 250 UNP Q9KPF0 Q9KPF0_VIBCH 110 250 SEQADV 9DCG ALA A 109 UNP Q9KPF0 EXPRESSION TAG SEQADV 9DCG ALA B 109 UNP Q9KPF0 EXPRESSION TAG SEQRES 1 A 142 ALA GLN ASP SER MSE ILE GLU PHE LYS ALA PRO ASN GLU SEQRES 2 A 142 LYS TYR ALA ILE THR VAL PHE THR ASP ILE THR CYS GLY SEQRES 3 A 142 TYR CYS VAL ARG LEU HIS SER GLN ILE LYS GLU TYR ASN SEQRES 4 A 142 ASP LEU GLY ILE THR VAL ARG TYR LEU ALA TYR PRO ARG SEQRES 5 A 142 GLN GLY PRO GLN GLY GLN VAL ALA ASP GLN MSE ALA ALA SEQRES 6 A 142 ILE TRP CYS SER ASN ASP PRO LYS ALA ALA MSE HIS ASP SEQRES 7 A 142 ALA LYS VAL ASN ARG LYS THR ILE THR ALA ASP LYS ASP SEQRES 8 A 142 ILE ALA GLN CYS GLN LYS THR ILE ALA GLN HIS TYR MSE SEQRES 9 A 142 LEU GLY HIS GLU LEU GLY ILE SER GLY THR PRO ALA ILE SEQRES 10 A 142 PHE LEU PRO ASN GLY GLU MSE VAL GLY GLY TYR LEU PRO SEQRES 11 A 142 ALA PRO GLN LEU LEU GLN ARG LEU GLN ALA THR GLN SEQRES 1 B 142 ALA GLN ASP SER MSE ILE GLU PHE LYS ALA PRO ASN GLU SEQRES 2 B 142 LYS TYR ALA ILE THR VAL PHE THR ASP ILE THR CYS GLY SEQRES 3 B 142 TYR CYS VAL ARG LEU HIS SER GLN ILE LYS GLU TYR ASN SEQRES 4 B 142 ASP LEU GLY ILE THR VAL ARG TYR LEU ALA TYR PRO ARG SEQRES 5 B 142 GLN GLY PRO GLN GLY GLN VAL ALA ASP GLN MSE ALA ALA SEQRES 6 B 142 ILE TRP CYS SER ASN ASP PRO LYS ALA ALA MSE HIS ASP SEQRES 7 B 142 ALA LYS VAL ASN ARG LYS THR ILE THR ALA ASP LYS ASP SEQRES 8 B 142 ILE ALA GLN CYS GLN LYS THR ILE ALA GLN HIS TYR MSE SEQRES 9 B 142 LEU GLY HIS GLU LEU GLY ILE SER GLY THR PRO ALA ILE SEQRES 10 B 142 PHE LEU PRO ASN GLY GLU MSE VAL GLY GLY TYR LEU PRO SEQRES 11 B 142 ALA PRO GLN LEU LEU GLN ARG LEU GLN ALA THR GLN MODRES 9DCG MSE A 113 MET MODIFIED RESIDUE MODRES 9DCG MSE A 171 MET MODIFIED RESIDUE MODRES 9DCG MSE A 184 MET MODIFIED RESIDUE MODRES 9DCG MSE A 212 MET MODIFIED RESIDUE MODRES 9DCG MSE A 232 MET MODIFIED RESIDUE MODRES 9DCG MSE B 113 MET MODIFIED RESIDUE MODRES 9DCG MSE B 171 MET MODIFIED RESIDUE MODRES 9DCG MSE B 184 MET MODIFIED RESIDUE MODRES 9DCG MSE B 212 MET MODIFIED RESIDUE MODRES 9DCG MSE B 232 MET MODIFIED RESIDUE HET MSE A 113 8 HET MSE A 171 8 HET MSE A 184 16 HET MSE A 212 8 HET MSE A 232 8 HET MSE B 113 8 HET MSE B 171 8 HET MSE B 184 16 HET MSE B 212 8 HET MSE B 232 8 HET FMT A 301 3 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET EDO B 301 4 HET CL B 302 1 HETNAM MSE SELENOMETHIONINE HETNAM FMT FORMIC ACID HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 FMT C H2 O2 FORMUL 4 CL 4(CL 1-) FORMUL 7 EDO C2 H6 O2 FORMUL 9 HOH *52(H2 O) HELIX 1 AA1 CYS A 133 SER A 141 1 9 HELIX 2 AA2 GLN A 142 LEU A 149 1 8 HELIX 3 AA3 GLY A 165 CYS A 176 1 12 HELIX 4 AA4 ASP A 179 VAL A 189 1 11 HELIX 5 AA5 ASP A 199 GLY A 218 1 20 HELIX 6 AA6 PRO A 238 GLN A 250 1 13 HELIX 7 AA7 CYS B 133 GLN B 142 1 10 HELIX 8 AA8 GLN B 142 LEU B 149 1 8 HELIX 9 AA9 GLY B 165 CYS B 176 1 12 HELIX 10 AB1 ASP B 179 VAL B 189 1 11 HELIX 11 AB2 ILE B 200 LEU B 217 1 18 HELIX 12 AB3 PRO B 238 GLN B 250 1 13 SHEET 1 AA1 5 ILE A 114 PHE A 116 0 SHEET 2 AA1 5 ILE A 151 ALA A 157 -1 O VAL A 153 N PHE A 116 SHEET 3 AA1 5 TYR A 123 THR A 129 1 N ILE A 125 O THR A 152 SHEET 4 AA1 5 ALA A 224 PHE A 226 -1 O PHE A 226 N THR A 126 SHEET 5 AA1 5 MSE A 232 VAL A 233 -1 O VAL A 233 N ILE A 225 SHEET 1 AA2 5 ILE B 114 PHE B 116 0 SHEET 2 AA2 5 ILE B 151 ALA B 157 -1 O VAL B 153 N PHE B 116 SHEET 3 AA2 5 TYR B 123 THR B 129 1 N ILE B 125 O THR B 152 SHEET 4 AA2 5 ALA B 224 PHE B 226 -1 O PHE B 226 N THR B 126 SHEET 5 AA2 5 MSE B 232 GLY B 234 -1 O VAL B 233 N ILE B 225 SSBOND 1 CYS A 176 CYS A 203 1555 1555 2.03 SSBOND 2 CYS B 176 CYS B 203 1555 1555 2.03 LINK C SER A 112 N MSE A 113 1555 1555 1.33 LINK C MSE A 113 N ILE A 114 1555 1555 1.33 LINK C GLN A 170 N MSE A 171 1555 1555 1.33 LINK C MSE A 171 N ALA A 172 1555 1555 1.34 LINK C ALA A 183 N AMSE A 184 1555 1555 1.33 LINK C ALA A 183 N BMSE A 184 1555 1555 1.33 LINK C AMSE A 184 N HIS A 185 1555 1555 1.34 LINK C BMSE A 184 N HIS A 185 1555 1555 1.34 LINK C TYR A 211 N MSE A 212 1555 1555 1.33 LINK C MSE A 212 N LEU A 213 1555 1555 1.34 LINK C GLU A 231 N MSE A 232 1555 1555 1.33 LINK C MSE A 232 N VAL A 233 1555 1555 1.33 LINK C SER B 112 N MSE B 113 1555 1555 1.33 LINK C MSE B 113 N ILE B 114 1555 1555 1.33 LINK C GLN B 170 N MSE B 171 1555 1555 1.33 LINK C MSE B 171 N ALA B 172 1555 1555 1.34 LINK C ALA B 183 N AMSE B 184 1555 1555 1.33 LINK C ALA B 183 N BMSE B 184 1555 1555 1.33 LINK C AMSE B 184 N HIS B 185 1555 1555 1.34 LINK C BMSE B 184 N HIS B 185 1555 1555 1.34 LINK C TYR B 211 N MSE B 212 1555 1555 1.33 LINK C MSE B 212 N LEU B 213 1555 1555 1.34 LINK C GLU B 231 N MSE B 232 1555 1555 1.33 LINK C MSE B 232 N VAL B 233 1555 1555 1.33 CISPEP 1 THR A 222 PRO A 223 0 -1.16 CISPEP 2 THR B 222 PRO B 223 0 -1.20 CRYST1 37.499 43.744 47.851 64.07 80.79 79.86 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026667 -0.004768 -0.002552 0.00000 SCALE2 0.000000 0.023223 -0.010777 0.00000 SCALE3 0.000000 0.000000 0.023340 0.00000