data_9DII # _entry.id 9DII # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DII pdb_00009dii 10.2210/pdb9dii/pdb WWPDB D_1000288195 ? ? EMDB EMD-46906 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-09 ? 2 'Structure model' 1 1 2025-04-16 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.identifier_ORCID' 8 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DII _pdbx_database_status.recvd_initial_deposition_date 2024-09-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Straight dimer from same dataset' 9DIG unspecified EMDB 'Rous sarcoma virus frameshifting pseudoknot RNA EM straight dimer' EMD-46906 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email adrian.ferre@gmail.com _pdbx_contact_author.name_first Adrian _pdbx_contact_author.name_last "Ferre-D'Amare" _pdbx_contact_author.name_mi R _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4549-1619 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jones, C.P.' 1 0000-0001-7780-5278 ;Ferre-D'Amare, A.R. ; 2 0000-0003-4549-1619 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 122 _citation.language ? _citation.page_first e2418418122 _citation.page_last e2418418122 _citation.title 'Structural switching dynamically controls the doubly pseudoknotted Rous sarcoma virus-programmed ribosomal frameshifting element.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2418418122 _citation.pdbx_database_id_PubMed 40172966 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jones, C.P.' 1 0000-0001-7780-5278 primary ;Ferre-D'Amare, A.R. ; 2 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'frameshifting pseudoknot RNA' _entity.formula_weight 35680.164 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGGCCACUGUUCUCACUGUUGCGCUACAUCUGGCUAUUCGGAAAUGGAAGCCAGACCACACGAAAGUGUGGAUUGACCAG UGGCCCCUCCCUGAAGGUAAACUUGUAGCGC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGGCCACUGUUCUCACUGUUGCGCUACAUCUGGCUAUUCGGAAAUGGAAGCCAGACCACACGAAAGUGUGGAUUGACCAG UGGCCCCUCCCUGAAGGUAAACUUGUAGCGC ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 C n 1 5 C n 1 6 A n 1 7 C n 1 8 U n 1 9 G n 1 10 U n 1 11 U n 1 12 C n 1 13 U n 1 14 C n 1 15 A n 1 16 C n 1 17 U n 1 18 G n 1 19 U n 1 20 U n 1 21 G n 1 22 C n 1 23 G n 1 24 C n 1 25 U n 1 26 A n 1 27 C n 1 28 A n 1 29 U n 1 30 C n 1 31 U n 1 32 G n 1 33 G n 1 34 C n 1 35 U n 1 36 A n 1 37 U n 1 38 U n 1 39 C n 1 40 G n 1 41 G n 1 42 A n 1 43 A n 1 44 A n 1 45 U n 1 46 G n 1 47 G n 1 48 A n 1 49 A n 1 50 G n 1 51 C n 1 52 C n 1 53 A n 1 54 G n 1 55 A n 1 56 C n 1 57 C n 1 58 A n 1 59 C n 1 60 A n 1 61 C n 1 62 G n 1 63 A n 1 64 A n 1 65 A n 1 66 G n 1 67 U n 1 68 G n 1 69 U n 1 70 G n 1 71 G n 1 72 A n 1 73 U n 1 74 U n 1 75 G n 1 76 A n 1 77 C n 1 78 C n 1 79 A n 1 80 G n 1 81 U n 1 82 G n 1 83 G n 1 84 C n 1 85 C n 1 86 C n 1 87 C n 1 88 U n 1 89 C n 1 90 C n 1 91 C n 1 92 U n 1 93 G n 1 94 A n 1 95 A n 1 96 G n 1 97 G n 1 98 U n 1 99 A n 1 100 A n 1 101 A n 1 102 C n 1 103 U n 1 104 U n 1 105 G n 1 106 U n 1 107 A n 1 108 G n 1 109 C n 1 110 G n 1 111 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 111 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rous sarcoma virus - Prague C' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11888 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'in vitro transcription vector pT7-TP(deltai)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 905931 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 C 4 4 4 C C A . n A 1 5 C 5 5 5 C C A . n A 1 6 A 6 6 6 A A A . n A 1 7 C 7 7 7 C C A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 U 10 10 10 U U A . n A 1 11 U 11 11 11 U U A . n A 1 12 C 12 12 ? ? ? A . n A 1 13 U 13 13 13 U U A . n A 1 14 C 14 14 14 C C A . n A 1 15 A 15 15 15 A A A . n A 1 16 C 16 16 16 C C A . n A 1 17 U 17 17 17 U U A . n A 1 18 G 18 18 18 G G A . n A 1 19 U 19 19 19 U U A . n A 1 20 U 20 20 20 U U A . n A 1 21 G 21 21 21 G G A . n A 1 22 C 22 22 22 C C A . n A 1 23 G 23 23 23 G G A . n A 1 24 C 24 24 24 C C A . n A 1 25 U 25 25 25 U U A . n A 1 26 A 26 26 26 A A A . n A 1 27 C 27 27 27 C C A . n A 1 28 A 28 28 28 A A A . n A 1 29 U 29 29 29 U U A . n A 1 30 C 30 30 30 C C A . n A 1 31 U 31 31 31 U U A . n A 1 32 G 32 32 32 G G A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 U 35 35 ? ? ? A . n A 1 36 A 36 36 ? ? ? A . n A 1 37 U 37 37 ? ? ? A . n A 1 38 U 38 38 ? ? ? A . n A 1 39 C 39 39 ? ? ? A . n A 1 40 G 40 40 ? ? ? A . n A 1 41 G 41 41 ? ? ? A . n A 1 42 A 42 42 ? ? ? A . n A 1 43 A 43 43 ? ? ? A . n A 1 44 A 44 44 ? ? ? A . n A 1 45 U 45 45 ? ? ? A . n A 1 46 G 46 46 ? ? ? A . n A 1 47 G 47 47 47 G G A . n A 1 48 A 48 48 48 A A A . n A 1 49 A 49 49 49 A A A . n A 1 50 G 50 50 50 G G A . n A 1 51 C 51 51 51 C C A . n A 1 52 C 52 52 52 C C A . n A 1 53 A 53 53 53 A A A . n A 1 54 G 54 54 54 G G A . n A 1 55 A 55 55 55 A A A . n A 1 56 C 56 56 56 C C A . n A 1 57 C 57 57 57 C C A . n A 1 58 A 58 58 58 A A A . n A 1 59 C 59 59 59 C C A . n A 1 60 A 60 60 60 A A A . n A 1 61 C 61 61 61 C C A . n A 1 62 G 62 62 ? ? ? A . n A 1 63 A 63 63 ? ? ? A . n A 1 64 A 64 64 ? ? ? A . n A 1 65 A 65 65 ? ? ? A . n A 1 66 G 66 66 66 G G A . n A 1 67 U 67 67 67 U U A . n A 1 68 G 68 68 68 G G A . n A 1 69 U 69 69 69 U U A . n A 1 70 G 70 70 70 G G A . n A 1 71 G 71 71 71 G G A . n A 1 72 A 72 72 72 A A A . n A 1 73 U 73 73 73 U U A . n A 1 74 U 74 74 74 U U A . n A 1 75 G 75 75 75 G G A . n A 1 76 A 76 76 76 A A A . n A 1 77 C 77 77 77 C C A . n A 1 78 C 78 78 78 C C A . n A 1 79 A 79 79 79 A A A . n A 1 80 G 80 80 80 G G A . n A 1 81 U 81 81 81 U U A . n A 1 82 G 82 82 82 G G A . n A 1 83 G 83 83 83 G G A . n A 1 84 C 84 84 84 C C A . n A 1 85 C 85 85 85 C C A . n A 1 86 C 86 86 86 C C A . n A 1 87 C 87 87 87 C C A . n A 1 88 U 88 88 88 U U A . n A 1 89 C 89 89 89 C C A . n A 1 90 C 90 90 90 C C A . n A 1 91 C 91 91 91 C C A . n A 1 92 U 92 92 ? ? ? A . n A 1 93 G 93 93 ? ? ? A . n A 1 94 A 94 94 94 A A A . n A 1 95 A 95 95 95 A A A . n A 1 96 G 96 96 96 G G A . n A 1 97 G 97 97 97 G G A . n A 1 98 U 98 98 98 U U A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 A 101 101 101 A A A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 U 104 104 104 U U A . n A 1 105 G 105 105 105 G G A . n A 1 106 U 106 106 106 U U A . n A 1 107 A 107 107 107 A A A . n A 1 108 G 108 108 108 G G A . n A 1 109 C 109 109 109 C C A . n A 1 110 G 110 110 110 G G A . n A 1 111 C 111 111 111 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 G 3 3 3 G G B . n B 1 4 C 4 4 4 C C B . n B 1 5 C 5 5 5 C C B . n B 1 6 A 6 6 6 A A B . n B 1 7 C 7 7 7 C C B . n B 1 8 U 8 8 8 U U B . n B 1 9 G 9 9 9 G G B . n B 1 10 U 10 10 10 U U B . n B 1 11 U 11 11 11 U U B . n B 1 12 C 12 12 ? ? ? B . n B 1 13 U 13 13 13 U U B . n B 1 14 C 14 14 14 C C B . n B 1 15 A 15 15 15 A A B . n B 1 16 C 16 16 16 C C B . n B 1 17 U 17 17 17 U U B . n B 1 18 G 18 18 18 G G B . n B 1 19 U 19 19 19 U U B . n B 1 20 U 20 20 20 U U B . n B 1 21 G 21 21 21 G G B . n B 1 22 C 22 22 22 C C B . n B 1 23 G 23 23 23 G G B . n B 1 24 C 24 24 24 C C B . n B 1 25 U 25 25 25 U U B . n B 1 26 A 26 26 26 A A B . n B 1 27 C 27 27 27 C C B . n B 1 28 A 28 28 28 A A B . n B 1 29 U 29 29 29 U U B . n B 1 30 C 30 30 30 C C B . n B 1 31 U 31 31 31 U U B . n B 1 32 G 32 32 32 G G B . n B 1 33 G 33 33 33 G G B . n B 1 34 C 34 34 34 C C B . n B 1 35 U 35 35 ? ? ? B . n B 1 36 A 36 36 ? ? ? B . n B 1 37 U 37 37 ? ? ? B . n B 1 38 U 38 38 ? ? ? B . n B 1 39 C 39 39 ? ? ? B . n B 1 40 G 40 40 ? ? ? B . n B 1 41 G 41 41 ? ? ? B . n B 1 42 A 42 42 ? ? ? B . n B 1 43 A 43 43 ? ? ? B . n B 1 44 A 44 44 ? ? ? B . n B 1 45 U 45 45 ? ? ? B . n B 1 46 G 46 46 ? ? ? B . n B 1 47 G 47 47 47 G G B . n B 1 48 A 48 48 48 A A B . n B 1 49 A 49 49 49 A A B . n B 1 50 G 50 50 50 G G B . n B 1 51 C 51 51 51 C C B . n B 1 52 C 52 52 52 C C B . n B 1 53 A 53 53 53 A A B . n B 1 54 G 54 54 54 G G B . n B 1 55 A 55 55 55 A A B . n B 1 56 C 56 56 56 C C B . n B 1 57 C 57 57 57 C C B . n B 1 58 A 58 58 58 A A B . n B 1 59 C 59 59 59 C C B . n B 1 60 A 60 60 60 A A B . n B 1 61 C 61 61 61 C C B . n B 1 62 G 62 62 ? ? ? B . n B 1 63 A 63 63 ? ? ? B . n B 1 64 A 64 64 ? ? ? B . n B 1 65 A 65 65 ? ? ? B . n B 1 66 G 66 66 66 G G B . n B 1 67 U 67 67 67 U U B . n B 1 68 G 68 68 68 G G B . n B 1 69 U 69 69 69 U U B . n B 1 70 G 70 70 70 G G B . n B 1 71 G 71 71 71 G G B . n B 1 72 A 72 72 72 A A B . n B 1 73 U 73 73 73 U U B . n B 1 74 U 74 74 74 U U B . n B 1 75 G 75 75 75 G G B . n B 1 76 A 76 76 76 A A B . n B 1 77 C 77 77 77 C C B . n B 1 78 C 78 78 78 C C B . n B 1 79 A 79 79 79 A A B . n B 1 80 G 80 80 80 G G B . n B 1 81 U 81 81 81 U U B . n B 1 82 G 82 82 82 G G B . n B 1 83 G 83 83 83 G G B . n B 1 84 C 84 84 84 C C B . n B 1 85 C 85 85 85 C C B . n B 1 86 C 86 86 86 C C B . n B 1 87 C 87 87 87 C C B . n B 1 88 U 88 88 88 U U B . n B 1 89 C 89 89 89 C C B . n B 1 90 C 90 90 90 C C B . n B 1 91 C 91 91 91 C C B . n B 1 92 U 92 92 ? ? ? B . n B 1 93 G 93 93 ? ? ? B . n B 1 94 A 94 94 94 A A B . n B 1 95 A 95 95 95 A A B . n B 1 96 G 96 96 96 G G B . n B 1 97 G 97 97 97 G G B . n B 1 98 U 98 98 98 U U B . n B 1 99 A 99 99 99 A A B . n B 1 100 A 100 100 100 A A B . n B 1 101 A 101 101 101 A A B . n B 1 102 C 102 102 102 C C B . n B 1 103 U 103 103 103 U U B . n B 1 104 U 104 104 104 U U B . n B 1 105 G 105 105 105 G G B . n B 1 106 U 106 106 106 U U B . n B 1 107 A 107 107 107 A A B . n B 1 108 G 108 108 108 G G B . n B 1 109 C 109 109 109 C C B . n B 1 110 G 110 110 110 G G B . n B 1 111 C 111 111 111 C C B . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 13 ? P ? A U 13 P 2 1 Y 1 A U 13 ? OP1 ? A U 13 OP1 3 1 Y 1 A U 13 ? OP2 ? A U 13 OP2 4 1 Y 1 B U 13 ? P ? B U 13 P 5 1 Y 1 B U 13 ? OP1 ? B U 13 OP1 6 1 Y 1 B U 13 ? OP2 ? B U 13 OP2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9DII _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DII _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DII _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9DII _struct.title 'Rous sarcoma virus frameshifting pseudoknot RNA EM straight dimer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DII _struct_keywords.text 'pseudoknot, retroviral RNA, frameshifting, translation regulation, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code J02342.1 _struct_ref.pdbx_db_accession 210171 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GGGCCACUGUUCUCACUGUUGCGCUACAUCUGGCUAUUCCGCUCAAAUGGAAGCCAGACCACACGCCUGUGUGGAUUGAC CAGUGGCCCCUCCCUGAAGGUAAACUUGUAGCGC ; _struct_ref.pdbx_align_begin 2722 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DII A 1 ? 111 ? 210171 2722 ? 2835 ? 1 111 2 1 9DII B 1 ? 111 ? 210171 2722 ? 2835 ? 1 111 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9DII G A 40 ? GB 210171 C 2761 conflict 40 1 1 9DII ? A ? ? GB 210171 C 2763 deletion ? 2 1 9DII ? A ? ? GB 210171 U 2764 deletion ? 3 1 9DII ? A ? ? GB 210171 C 2765 deletion ? 4 1 9DII A A 63 ? GB 210171 C 2787 conflict 63 5 1 9DII A A 64 ? GB 210171 C 2788 conflict 64 6 1 9DII A A 65 ? GB 210171 U 2789 conflict 65 7 2 9DII G B 40 ? GB 210171 C 2761 conflict 40 8 2 9DII ? B ? ? GB 210171 C 2763 deletion ? 9 2 9DII ? B ? ? GB 210171 U 2764 deletion ? 10 2 9DII ? B ? ? GB 210171 C 2765 deletion ? 11 2 9DII A B 63 ? GB 210171 C 2787 conflict 63 12 2 9DII A B 64 ? GB 210171 C 2788 conflict 64 13 2 9DII A B 65 ? GB 210171 U 2789 conflict 65 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Folded RNA forms a ratio of ~1:5 dimer:monomer' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 86 N3 ? ? A G 1 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 86 O2 ? ? A G 1 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 86 N4 ? ? A G 1 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 85 N3 ? ? A G 2 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 85 O2 ? ? A G 2 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 85 N4 ? ? A G 2 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 84 N3 ? ? A G 3 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 84 O2 ? ? A G 3 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 84 N4 ? ? A G 3 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 83 N1 ? ? A C 4 A G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 83 O6 ? ? A C 4 A G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 83 N2 ? ? A C 4 A G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 82 N1 ? ? A C 5 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 82 O6 ? ? A C 5 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 82 N2 ? ? A C 5 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 81 N3 ? ? A A 6 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 81 O4 ? ? A A 6 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 80 N1 ? ? A C 7 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 80 O6 ? ? A C 7 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 80 N2 ? ? A C 7 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 79 N1 ? ? A U 8 A A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 79 N6 ? ? A U 8 A A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 9 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 9 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 9 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 10 N3 ? ? ? 1_555 A C 77 N3 ? ? A U 10 A C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog27 hydrog ? ? A U 10 O4 ? ? ? 1_555 A C 77 N4 ? ? A U 10 A C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog28 hydrog ? ? A U 10 N3 ? ? ? 1_555 A C 78 N3 ? ? A U 10 A C 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog29 hydrog ? ? A U 10 O4 ? ? ? 1_555 A C 78 N4 ? ? A U 10 A C 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog30 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 76 N1 ? ? A U 11 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 76 N6 ? ? A U 11 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 11 N3 ? ? ? 1_555 A C 77 N3 ? ? A U 11 A C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog33 hydrog ? ? A U 11 O4 ? ? ? 1_555 A C 77 N4 ? ? A U 11 A C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog34 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 76 N1 ? ? A U 13 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A U 13 O4 ? ? ? 1_555 A A 76 N6 ? ? A U 13 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 75 N1 ? ? A C 14 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 75 O6 ? ? A C 14 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 75 N2 ? ? A C 14 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 15 N1 ? ? ? 1_555 A U 74 N3 ? ? A A 15 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 15 N6 ? ? ? 1_555 A U 74 O4 ? ? A A 15 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 16 N3 ? ? ? 1_555 A U 73 N3 ? ? A C 16 A U 73 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog42 hydrog ? ? A C 16 N4 ? ? ? 1_555 A U 73 O4 ? ? A C 16 A U 73 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog43 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 72 N1 ? ? A U 17 A A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 72 N6 ? ? A U 17 A A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 18 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 18 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 18 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 101 N1 ? ? A U 19 A A 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 19 O4 ? ? ? 1_555 A A 101 N6 ? ? A U 19 A A 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 100 N1 ? ? A U 20 A A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 100 N6 ? ? A U 20 A A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 111 N3 ? ? A G 21 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 111 O2 ? ? A G 21 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 111 N4 ? ? A G 21 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 110 N1 ? ? A C 22 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 110 O6 ? ? A C 22 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 110 N2 ? ? A C 22 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 109 N3 ? ? A G 23 A C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 109 O2 ? ? A G 23 A C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 109 N4 ? ? A G 23 A C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 108 N1 ? ? A C 24 A G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 108 O6 ? ? A C 24 A G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 108 N2 ? ? A C 24 A G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 107 N1 ? ? A U 25 A A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 107 N6 ? ? A U 25 A A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 26 N1 ? ? ? 1_555 A U 106 N3 ? ? A A 26 A U 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 26 N6 ? ? ? 1_555 A U 106 O4 ? ? A A 26 A U 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 105 N1 ? ? A C 27 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 105 O6 ? ? A C 27 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 105 N2 ? ? A C 27 A G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 28 N1 ? ? ? 1_555 A U 104 N3 ? ? A A 28 A U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A A 28 N6 ? ? ? 1_555 A U 104 O4 ? ? A A 28 A U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 29 N3 ? ? ? 1_555 A U 103 O4 ? ? A U 29 A U 103 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog74 hydrog ? ? A U 29 O2 ? ? ? 1_555 A U 103 N3 ? ? A U 29 A U 103 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog75 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 30 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 30 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 30 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 53 N1 ? ? A U 31 A A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 53 N6 ? ? A U 31 A A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 52 N3 ? ? A G 32 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 52 O2 ? ? A G 32 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 52 N4 ? ? A G 32 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 51 N3 ? ? A G 33 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 51 O2 ? ? A G 33 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 51 N4 ? ? A G 33 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 34 N3 ? ? ? 1_555 A G 50 N1 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 34 N4 ? ? ? 1_555 A G 50 O6 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 34 O2 ? ? ? 1_555 A G 50 N2 ? ? A C 34 A G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 71 N1 ? ? A C 56 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 71 O6 ? ? A C 56 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 71 N2 ? ? A C 56 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 57 N3 ? ? ? 1_555 A G 70 N1 ? ? A C 57 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 57 N4 ? ? ? 1_555 A G 70 O6 ? ? A C 57 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 57 O2 ? ? ? 1_555 A G 70 N2 ? ? A C 57 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A A 58 N1 ? ? ? 1_555 A U 69 N3 ? ? A A 58 A U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A A 58 N6 ? ? ? 1_555 A U 69 O4 ? ? A A 58 A U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 59 N3 ? ? ? 1_555 A G 68 N1 ? ? A C 59 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 59 N4 ? ? ? 1_555 A G 68 O6 ? ? A C 59 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 59 O2 ? ? ? 1_555 A G 68 N2 ? ? A C 59 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 60 N1 ? ? ? 1_555 A U 67 N3 ? ? A A 60 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A A 60 N6 ? ? ? 1_555 A U 67 O4 ? ? A A 60 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 61 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 61 A G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 61 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 61 A G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 61 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 61 A G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 61 N3 ? ? ? 1_555 A U 67 N3 ? ? A C 61 A U 67 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog106 hydrog ? ? A C 61 N4 ? ? ? 1_555 A U 67 O4 ? ? A C 61 A U 67 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog107 hydrog ? ? A U 88 N3 ? ? ? 1_555 B U 98 O2 ? ? A U 88 B U 98 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog108 hydrog ? ? A U 88 O4 ? ? ? 1_555 B U 98 N3 ? ? A U 88 B U 98 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog109 hydrog ? ? A C 89 N3 ? ? ? 1_555 B G 97 N1 ? ? A C 89 B G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 89 N4 ? ? ? 1_555 B G 97 O6 ? ? A C 89 B G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 89 O2 ? ? ? 1_555 B G 97 N2 ? ? A C 89 B G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 90 N3 ? ? ? 1_555 B G 96 N1 ? ? A C 90 B G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 90 N4 ? ? ? 1_555 B G 96 O6 ? ? A C 90 B G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A C 90 O2 ? ? ? 1_555 B G 96 N2 ? ? A C 90 B G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 96 N1 ? ? ? 1_555 B C 90 N3 ? ? A G 96 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 96 N2 ? ? ? 1_555 B C 90 O2 ? ? A G 96 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 96 O6 ? ? ? 1_555 B C 90 N4 ? ? A G 96 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A G 97 N1 ? ? ? 1_555 B C 89 N3 ? ? A G 97 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A G 97 N2 ? ? ? 1_555 B C 89 O2 ? ? A G 97 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A G 97 O6 ? ? ? 1_555 B C 89 N4 ? ? A G 97 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A U 98 N3 ? ? ? 1_555 B U 88 O4 ? ? A U 98 B U 88 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog122 hydrog ? ? A U 98 O2 ? ? ? 1_555 B U 88 N3 ? ? A U 98 B U 88 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog123 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 86 N3 ? ? B G 1 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 86 O2 ? ? B G 1 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 86 N4 ? ? B G 1 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 85 N3 ? ? B G 2 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 85 O2 ? ? B G 2 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 85 N4 ? ? B G 2 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 84 N3 ? ? B G 3 B C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 84 O2 ? ? B G 3 B C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 84 N4 ? ? B G 3 B C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 83 N1 ? ? B C 4 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 83 O6 ? ? B C 4 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 83 N2 ? ? B C 4 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 82 N1 ? ? B C 5 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 82 O6 ? ? B C 5 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 82 N2 ? ? B C 5 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B A 6 N1 ? ? ? 1_555 B U 81 N3 ? ? B A 6 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B A 6 N6 ? ? ? 1_555 B U 81 O4 ? ? B A 6 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 80 N1 ? ? B C 7 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 80 O6 ? ? B C 7 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 80 N2 ? ? B C 7 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 79 N1 ? ? B U 8 B A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B U 8 O4 ? ? ? 1_555 B A 79 N6 ? ? B U 8 B A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 78 N3 ? ? B G 9 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 78 O2 ? ? B G 9 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 78 N4 ? ? B G 9 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B U 10 N3 ? ? ? 1_555 B C 77 N3 ? ? B U 10 B C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog149 hydrog ? ? B U 10 O4 ? ? ? 1_555 B C 77 N4 ? ? B U 10 B C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog150 hydrog ? ? B U 10 N3 ? ? ? 1_555 B C 78 N3 ? ? B U 10 B C 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog151 hydrog ? ? B U 10 O4 ? ? ? 1_555 B C 78 N4 ? ? B U 10 B C 78 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog152 hydrog ? ? B U 11 N3 ? ? ? 1_555 B A 76 N1 ? ? B U 11 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? B U 11 O4 ? ? ? 1_555 B A 76 N6 ? ? B U 11 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? B U 11 N3 ? ? ? 1_555 B C 77 N3 ? ? B U 11 B C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog155 hydrog ? ? B U 11 O4 ? ? ? 1_555 B C 77 N4 ? ? B U 11 B C 77 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog156 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 76 N1 ? ? B U 13 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? B U 13 O4 ? ? ? 1_555 B A 76 N6 ? ? B U 13 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 75 N1 ? ? B C 14 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 75 O6 ? ? B C 14 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 75 N2 ? ? B C 14 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? B A 15 N1 ? ? ? 1_555 B U 74 N3 ? ? B A 15 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? B A 15 N6 ? ? ? 1_555 B U 74 O4 ? ? B A 15 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? B C 16 N3 ? ? ? 1_555 B U 73 N3 ? ? B C 16 B U 73 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog164 hydrog ? ? B C 16 N4 ? ? ? 1_555 B U 73 O4 ? ? B C 16 B U 73 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog165 hydrog ? ? B U 17 N3 ? ? ? 1_555 B A 72 N1 ? ? B U 17 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? B U 17 O4 ? ? ? 1_555 B A 72 N6 ? ? B U 17 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? B G 18 N1 ? ? ? 1_555 B C 102 N3 ? ? B G 18 B C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? B G 18 N2 ? ? ? 1_555 B C 102 O2 ? ? B G 18 B C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? B G 18 O6 ? ? ? 1_555 B C 102 N4 ? ? B G 18 B C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? B U 19 N3 ? ? ? 1_555 B A 101 N1 ? ? B U 19 B A 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? B U 19 O4 ? ? ? 1_555 B A 101 N6 ? ? B U 19 B A 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? B U 20 N3 ? ? ? 1_555 B A 100 N1 ? ? B U 20 B A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? B U 20 O4 ? ? ? 1_555 B A 100 N6 ? ? B U 20 B A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? B G 21 N1 ? ? ? 1_555 B C 111 N3 ? ? B G 21 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? B G 21 N2 ? ? ? 1_555 B C 111 O2 ? ? B G 21 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? B G 21 O6 ? ? ? 1_555 B C 111 N4 ? ? B G 21 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? B C 22 N3 ? ? ? 1_555 B G 110 N1 ? ? B C 22 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? B C 22 N4 ? ? ? 1_555 B G 110 O6 ? ? B C 22 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? B C 22 O2 ? ? ? 1_555 B G 110 N2 ? ? B C 22 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? B G 23 N1 ? ? ? 1_555 B C 109 N3 ? ? B G 23 B C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? B G 23 N2 ? ? ? 1_555 B C 109 O2 ? ? B G 23 B C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? B G 23 O6 ? ? ? 1_555 B C 109 N4 ? ? B G 23 B C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog183 hydrog ? ? B C 24 N3 ? ? ? 1_555 B G 108 N1 ? ? B C 24 B G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog184 hydrog ? ? B C 24 N4 ? ? ? 1_555 B G 108 O6 ? ? B C 24 B G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? B C 24 O2 ? ? ? 1_555 B G 108 N2 ? ? B C 24 B G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? B U 25 N3 ? ? ? 1_555 B A 107 N1 ? ? B U 25 B A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? B U 25 O4 ? ? ? 1_555 B A 107 N6 ? ? B U 25 B A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? B A 26 N1 ? ? ? 1_555 B U 106 N3 ? ? B A 26 B U 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? B A 26 N6 ? ? ? 1_555 B U 106 O4 ? ? B A 26 B U 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? B C 27 N3 ? ? ? 1_555 B G 105 N1 ? ? B C 27 B G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? B C 27 N4 ? ? ? 1_555 B G 105 O6 ? ? B C 27 B G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? B C 27 O2 ? ? ? 1_555 B G 105 N2 ? ? B C 27 B G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? B A 28 N1 ? ? ? 1_555 B U 104 N3 ? ? B A 28 B U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? B A 28 N6 ? ? ? 1_555 B U 104 O4 ? ? B A 28 B U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? B U 29 N3 ? ? ? 1_555 B U 103 O4 ? ? B U 29 B U 103 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog196 hydrog ? ? B U 29 O2 ? ? ? 1_555 B U 103 N3 ? ? B U 29 B U 103 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog197 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 54 N1 ? ? B C 30 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog198 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 54 O6 ? ? B C 30 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog199 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 54 N2 ? ? B C 30 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog200 hydrog ? ? B U 31 N3 ? ? ? 1_555 B A 53 N1 ? ? B U 31 B A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog201 hydrog ? ? B U 31 O4 ? ? ? 1_555 B A 53 N6 ? ? B U 31 B A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 52 N3 ? ? B G 32 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 52 O2 ? ? B G 32 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 52 N4 ? ? B G 32 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog205 hydrog ? ? B G 33 N1 ? ? ? 1_555 B C 51 N3 ? ? B G 33 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog206 hydrog ? ? B G 33 N2 ? ? ? 1_555 B C 51 O2 ? ? B G 33 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog207 hydrog ? ? B G 33 O6 ? ? ? 1_555 B C 51 N4 ? ? B G 33 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog208 hydrog ? ? B C 34 N3 ? ? ? 1_555 B G 50 N1 ? ? B C 34 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog209 hydrog ? ? B C 34 N4 ? ? ? 1_555 B G 50 O6 ? ? B C 34 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog210 hydrog ? ? B C 34 O2 ? ? ? 1_555 B G 50 N2 ? ? B C 34 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog211 hydrog ? ? B C 56 N3 ? ? ? 1_555 B G 71 N1 ? ? B C 56 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog212 hydrog ? ? B C 56 N4 ? ? ? 1_555 B G 71 O6 ? ? B C 56 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog213 hydrog ? ? B C 56 O2 ? ? ? 1_555 B G 71 N2 ? ? B C 56 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog214 hydrog ? ? B C 57 N3 ? ? ? 1_555 B G 70 N1 ? ? B C 57 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog215 hydrog ? ? B C 57 N4 ? ? ? 1_555 B G 70 O6 ? ? B C 57 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog216 hydrog ? ? B C 57 O2 ? ? ? 1_555 B G 70 N2 ? ? B C 57 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog217 hydrog ? ? B A 58 N1 ? ? ? 1_555 B U 69 N3 ? ? B A 58 B U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog218 hydrog ? ? B A 58 N6 ? ? ? 1_555 B U 69 O4 ? ? B A 58 B U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog219 hydrog ? ? B C 59 N3 ? ? ? 1_555 B G 68 N1 ? ? B C 59 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog220 hydrog ? ? B C 59 N4 ? ? ? 1_555 B G 68 O6 ? ? B C 59 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog221 hydrog ? ? B C 59 O2 ? ? ? 1_555 B G 68 N2 ? ? B C 59 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog222 hydrog ? ? B A 60 N1 ? ? ? 1_555 B U 67 N3 ? ? B A 60 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog223 hydrog ? ? B A 60 N6 ? ? ? 1_555 B U 67 O4 ? ? B A 60 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog224 hydrog ? ? B C 61 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 61 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog225 hydrog ? ? B C 61 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 61 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog226 hydrog ? ? B C 61 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 61 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog227 hydrog ? ? B C 61 N3 ? ? ? 1_555 B U 67 N3 ? ? B C 61 B U 67 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog228 hydrog ? ? B C 61 N4 ? ? ? 1_555 B U 67 O4 ? ? B C 61 B U 67 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9DII _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O2'" A C 86 ? ? OP2 A U 88 ? ? 2.19 2 1 "O2'" B C 86 ? ? OP2 B U 88 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C2 A C 7 ? ? N1 A C 7 ? ? "C1'" A C 7 ? ? 125.65 118.80 6.85 1.10 N 2 1 C2 A C 57 ? ? N1 A C 57 ? ? "C1'" A C 57 ? ? 125.58 118.80 6.78 1.10 N 3 1 C2 B C 7 ? ? N1 B C 7 ? ? "C1'" B C 7 ? ? 125.62 118.80 6.82 1.10 N 4 1 C2 B C 57 ? ? N1 B C 57 ? ? "C1'" B C 57 ? ? 125.55 118.80 6.75 1.10 N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9DII _em_3d_fitting.method ? _em_3d_fitting.target_criteria 'Cross-correlation coefficient' _em_3d_fitting.details ;Phenix real-space refinement, using real-space refinement, simulated annealing on the first step, B-factor, occupancy, and global minimization with NCS and secondary structure restraints ; _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol OTHER # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 9DIB _em_3d_fitting_list.pdb_chain_id B _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details 'Two copies of B were placed' _em_3d_fitting_list.chain_id B _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 9DIB _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9DII _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 108000 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '25 mM HEPES-KOH, pH 7.4, 150 mM KCl, 10 mM MgCl2' _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Dimeric RNA' _em_entity_assembly.details 'Folded RNA specimen prepared by in vitro transcription' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9DII _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9DII _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK I' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9DII _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9DII _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A C 12 ? A C 12 2 1 Y 1 A U 35 ? A U 35 3 1 Y 1 A A 36 ? A A 36 4 1 Y 1 A U 37 ? A U 37 5 1 Y 1 A U 38 ? A U 38 6 1 Y 1 A C 39 ? A C 39 7 1 Y 1 A G 40 ? A G 40 8 1 Y 1 A G 41 ? A G 41 9 1 Y 1 A A 42 ? A A 42 10 1 Y 1 A A 43 ? A A 43 11 1 Y 1 A A 44 ? A A 44 12 1 Y 1 A U 45 ? A U 45 13 1 Y 1 A G 46 ? A G 46 14 1 Y 1 A G 62 ? A G 62 15 1 Y 1 A A 63 ? A A 63 16 1 Y 1 A A 64 ? A A 64 17 1 Y 1 A A 65 ? A A 65 18 1 Y 1 A U 92 ? A U 92 19 1 Y 1 A G 93 ? A G 93 20 1 Y 1 B C 12 ? B C 12 21 1 Y 1 B U 35 ? B U 35 22 1 Y 1 B A 36 ? B A 36 23 1 Y 1 B U 37 ? B U 37 24 1 Y 1 B U 38 ? B U 38 25 1 Y 1 B C 39 ? B C 39 26 1 Y 1 B G 40 ? B G 40 27 1 Y 1 B G 41 ? B G 41 28 1 Y 1 B A 42 ? B A 42 29 1 Y 1 B A 43 ? B A 43 30 1 Y 1 B A 44 ? B A 44 31 1 Y 1 B U 45 ? B U 45 32 1 Y 1 B G 46 ? B G 46 33 1 Y 1 B G 62 ? B G 62 34 1 Y 1 B A 63 ? B A 63 35 1 Y 1 B A 64 ? B A 64 36 1 Y 1 B A 65 ? B A 65 37 1 Y 1 B U 92 ? B U 92 38 1 Y 1 B G 93 ? B G 93 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2024-09-05 _em_admin.deposition_site RCSB _em_admin.entry_id 9DII _em_admin.last_update 2025-04-16 _em_admin.map_release_date 2025-04-09 _em_admin.title 'Rous sarcoma virus frameshifting pseudoknot RNA EM straight dimer' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 11888 _em_entity_assembly_naturalsource.organism 'Rous sarcoma virus - Prague C' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 905931 _em_entity_assembly_recombinant.organism 'in vitro transcription vector pT7-TP(deltai)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 54.4 _em_image_recording.details '7874 curated micrographs' _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 7874 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 3400000 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? Topaz ? 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4.1 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? CLASSIFICATION ? 11 1 ? ? RELION ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9DII 'double helix' 9DII 'a-form double helix' 9DII 'hairpin loop' 9DII 'bulge loop' 9DII 'mismatched base pair' 9DII 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 18 1_555 A C 102 1_555 -0.254 -0.320 0.847 -2.073 4.901 0.277 1 A_G18:C102_A A 18 ? A 102 ? 19 1 1 A U 19 1_555 A A 101 1_555 -0.181 -0.154 0.784 2.530 6.760 -2.693 2 A_U19:A101_A A 19 ? A 101 ? 20 1 1 A U 20 1_555 A A 100 1_555 -0.004 -0.209 0.641 6.379 3.725 -1.698 3 A_U20:A100_A A 20 ? A 100 ? 20 1 1 A U 103 1_555 A U 29 1_555 -2.495 -1.298 -1.431 -45.607 3.129 -0.858 4 A_U103:U29_A A 103 ? A 29 ? 16 1 1 A U 104 1_555 A A 28 1_555 0.080 -0.091 0.131 -21.246 19.487 5.581 5 A_U104:A28_A A 104 ? A 28 ? 20 1 1 A G 105 1_555 A C 27 1_555 -0.263 -0.203 -0.001 1.003 0.130 -0.569 6 A_G105:C27_A A 105 ? A 27 ? 19 1 1 A U 106 1_555 A A 26 1_555 -0.122 -0.136 -0.242 6.734 -0.249 -0.436 7 A_U106:A26_A A 106 ? A 26 ? 20 1 1 A A 107 1_555 A U 25 1_555 0.033 -0.194 -0.461 0.717 7.292 0.949 8 A_A107:U25_A A 107 ? A 25 ? 20 1 1 A G 108 1_555 A C 24 1_555 -0.181 -0.144 -0.346 0.102 4.818 4.801 9 A_G108:C24_A A 108 ? A 24 ? 19 1 1 A C 109 1_555 A G 23 1_555 0.264 -0.134 -0.117 -2.016 2.339 4.932 10 A_C109:G23_A A 109 ? A 23 ? 19 1 1 A G 110 1_555 A C 22 1_555 -0.157 -0.161 -0.106 -8.428 1.405 -2.290 11 A_G110:C22_A A 110 ? A 22 ? 19 1 1 A C 111 1_555 A G 21 1_555 0.317 -0.150 -0.052 -0.659 12.894 -0.672 12 A_C111:G21_A A 111 ? A 21 ? 19 1 1 B G 1 1_555 B C 86 1_555 -0.158 -0.114 0.340 -6.168 -0.345 -1.528 13 B_G1:C86_B B 1 ? B 86 ? 19 1 1 B G 2 1_555 B C 85 1_555 -0.157 -0.143 0.482 -3.905 1.929 -0.339 14 B_G2:C85_B B 2 ? B 85 ? 19 1 1 B G 3 1_555 B C 84 1_555 -0.209 -0.173 0.458 -0.318 6.438 0.785 15 B_G3:C84_B B 3 ? B 84 ? 19 1 1 B C 4 1_555 B G 83 1_555 0.267 -0.129 0.296 5.449 2.719 4.884 16 B_C4:G83_B B 4 ? B 83 ? 19 1 1 B C 5 1_555 B G 82 1_555 0.161 -0.157 -0.365 2.937 -1.419 3.346 17 B_C5:G82_B B 5 ? B 82 ? 19 1 1 B A 6 1_555 B U 81 1_555 0.072 -0.217 0.423 0.105 5.128 -4.805 18 B_A6:U81_B B 6 ? B 81 ? 20 1 1 B C 7 1_555 B G 80 1_555 0.112 -0.283 0.552 2.581 5.395 1.271 19 B_C7:G80_B B 7 ? B 80 ? 19 1 1 B U 8 1_555 B A 79 1_555 -0.037 -0.199 0.409 6.227 7.251 4.495 20 B_U8:A79_B B 8 ? B 79 ? 20 1 1 B G 9 1_555 B C 78 1_555 0.044 -0.532 -1.388 -7.782 3.161 -0.667 21 B_G9:C78_B B 9 ? B 78 ? 19 1 1 B U 10 1_555 B C 77 1_555 -1.177 -1.698 -0.995 -4.940 1.924 0.606 22 B_U10:C77_B B 10 ? B 77 ? 18 1 1 B U 11 1_555 B A 76 1_555 -0.318 -0.188 -1.273 -1.328 7.461 -20.541 23 B_U11:A76_B B 11 ? B 76 ? 20 1 1 B C 14 1_555 B G 75 1_555 0.133 -0.391 0.841 7.807 2.183 2.445 24 B_C14:G75_B B 14 ? B 75 ? 19 1 1 B A 15 1_555 B U 74 1_555 0.088 -0.167 -0.439 0.832 -2.482 -1.184 25 B_A15:U74_B B 15 ? B 74 ? 20 1 1 B C 16 1_555 B U 73 1_555 -0.439 -1.476 0.328 -3.591 -6.249 -11.447 26 B_C16:U73_B B 16 ? B 73 ? 18 1 1 B U 17 1_555 B A 72 1_555 -0.177 -0.243 1.037 -3.559 0.202 -1.816 27 B_U17:A72_B B 17 ? B 72 ? 20 1 1 B C 56 1_555 B G 71 1_555 0.145 -0.202 0.634 2.525 0.328 3.022 28 B_C56:G71_B B 56 ? B 71 ? 19 1 1 B C 57 1_555 B G 70 1_555 0.052 -0.240 0.383 7.387 0.890 -0.828 29 B_C57:G70_B B 57 ? B 70 ? 19 1 1 B A 58 1_555 B U 69 1_555 0.012 -0.214 -0.358 -1.926 2.233 3.238 30 B_A58:U69_B B 58 ? B 69 ? 20 1 1 B C 59 1_555 B G 68 1_555 0.158 -0.236 -0.207 1.382 6.293 1.756 31 B_C59:G68_B B 59 ? B 68 ? 19 1 1 B A 60 1_555 B U 67 1_555 0.242 -0.697 -1.535 2.801 9.367 -6.290 32 B_A60:U67_B B 60 ? B 67 ? 20 1 1 B C 61 1_555 B G 66 1_555 0.119 -0.744 -1.644 12.935 3.699 1.290 33 B_C61:G66_B B 61 ? B 66 ? 19 1 1 A C 30 1_555 A G 54 1_555 0.257 -0.269 -0.629 -0.321 8.699 -1.902 34 A_C30:G54_A A 30 ? A 54 ? 19 1 1 A U 31 1_555 A A 53 1_555 -0.023 -0.139 -0.584 4.669 7.230 -0.384 35 A_U31:A53_A A 31 ? A 53 ? 20 1 1 A G 32 1_555 A C 52 1_555 -0.127 -0.203 -0.049 4.823 8.982 -2.697 36 A_G32:C52_A A 32 ? A 52 ? 19 1 1 A G 33 1_555 A C 51 1_555 -0.085 -0.301 -0.974 -1.822 4.694 -2.202 37 A_G33:C51_A A 33 ? A 51 ? 19 1 1 A C 34 1_555 A G 50 1_555 0.006 -0.575 1.472 -5.770 -0.733 -4.686 38 A_C34:G50_A A 34 ? A 50 ? 19 1 1 A G 66 1_555 A C 61 1_555 -0.120 -0.744 -1.644 -12.938 3.699 1.293 39 A_G66:C61_A A 66 ? A 61 ? 19 1 1 A U 67 1_555 A A 60 1_555 -0.241 -0.697 -1.536 -2.788 9.372 -6.295 40 A_U67:A60_A A 67 ? A 60 ? 20 1 1 A G 68 1_555 A C 59 1_555 -0.158 -0.236 -0.206 -1.370 6.281 1.769 41 A_G68:C59_A A 68 ? A 59 ? 19 1 1 A U 69 1_555 A A 58 1_555 -0.011 -0.215 -0.356 1.902 2.228 3.237 42 A_U69:A58_A A 69 ? A 58 ? 20 1 1 A G 70 1_555 A C 57 1_555 -0.052 -0.240 0.382 -7.389 0.893 -0.826 43 A_G70:C57_A A 70 ? A 57 ? 19 1 1 A G 71 1_555 A C 56 1_555 -0.145 -0.202 0.634 -2.501 0.315 3.014 44 A_G71:C56_A A 71 ? A 56 ? 19 1 1 A A 72 1_555 A U 17 1_555 0.177 -0.243 1.037 3.560 0.215 -1.824 45 A_A72:U17_A A 72 ? A 17 ? 20 1 1 A U 73 1_555 A C 16 1_555 0.439 -1.477 0.329 3.585 -6.272 -11.434 46 A_U73:C16_A A 73 ? A 16 ? 18 1 1 A U 74 1_555 A A 15 1_555 -0.088 -0.167 -0.440 -0.817 -2.482 -1.194 47 A_U74:A15_A A 74 ? A 15 ? 20 1 1 A G 75 1_555 A C 14 1_555 -0.132 -0.391 0.840 -7.805 2.182 2.441 48 A_G75:C14_A A 75 ? A 14 ? 19 1 1 A A 76 1_555 A U 11 1_555 0.319 -0.189 -1.273 1.338 7.455 -20.543 49 A_A76:U11_A A 76 ? A 11 ? 20 1 1 A C 77 1_555 A U 10 1_555 1.176 -1.698 -0.996 4.946 1.933 0.595 50 A_C77:U10_A A 77 ? A 10 ? 18 1 1 A C 78 1_555 A G 9 1_555 -0.044 -0.532 -1.388 7.779 3.160 -0.663 51 A_C78:G9_A A 78 ? A 9 ? 19 1 1 A A 79 1_555 A U 8 1_555 0.037 -0.200 0.408 -6.237 7.263 4.493 52 A_A79:U8_A A 79 ? A 8 ? 20 1 1 A G 80 1_555 A C 7 1_555 -0.111 -0.283 0.552 -2.578 5.389 1.267 53 A_G80:C7_A A 80 ? A 7 ? 19 1 1 A U 81 1_555 A A 6 1_555 -0.073 -0.217 0.422 -0.079 5.115 -4.813 54 A_U81:A6_A A 81 ? A 6 ? 20 1 1 A G 82 1_555 A C 5 1_555 -0.160 -0.157 -0.364 -2.931 -1.425 3.337 55 A_G82:C5_A A 82 ? A 5 ? 19 1 1 A G 83 1_555 A C 4 1_555 -0.267 -0.128 0.296 -5.464 2.718 4.877 56 A_G83:C4_A A 83 ? A 4 ? 19 1 1 A C 84 1_555 A G 3 1_555 0.210 -0.174 0.457 0.332 6.441 0.789 57 A_C84:G3_A A 84 ? A 3 ? 19 1 1 A C 85 1_555 A G 2 1_555 0.156 -0.143 0.481 3.925 1.920 -0.351 58 A_C85:G2_A A 85 ? A 2 ? 19 1 1 A C 86 1_555 A G 1 1_555 0.158 -0.114 0.339 6.179 -0.321 -1.532 59 A_C86:G1_A A 86 ? A 1 ? 19 1 1 B G 21 1_555 B C 111 1_555 -0.316 -0.149 -0.053 0.648 12.904 -0.679 60 B_G21:C111_B B 21 ? B 111 ? 19 1 1 B C 22 1_555 B G 110 1_555 0.157 -0.161 -0.105 8.437 1.409 -2.299 61 B_C22:G110_B B 22 ? B 110 ? 19 1 1 B G 23 1_555 B C 109 1_555 -0.263 -0.134 -0.116 2.017 2.341 4.926 62 B_G23:C109_B B 23 ? B 109 ? 19 1 1 B C 24 1_555 B G 108 1_555 0.180 -0.144 -0.346 -0.099 4.832 4.798 63 B_C24:G108_B B 24 ? B 108 ? 19 1 1 B U 25 1_555 B A 107 1_555 -0.033 -0.194 -0.461 -0.739 7.296 0.962 64 B_U25:A107_B B 25 ? B 107 ? 20 1 1 B A 26 1_555 B U 106 1_555 0.121 -0.136 -0.242 -6.738 -0.252 -0.433 65 B_A26:U106_B B 26 ? B 106 ? 20 1 1 B C 27 1_555 B G 105 1_555 0.263 -0.203 0.000 -0.997 0.123 -0.586 66 B_C27:G105_B B 27 ? B 105 ? 19 1 1 B A 28 1_555 B U 104 1_555 -0.079 -0.091 0.131 21.229 19.479 5.570 67 B_A28:U104_B B 28 ? B 104 ? 20 1 1 B U 29 1_555 B U 103 1_555 2.495 -1.299 -1.431 45.593 3.136 -0.849 68 B_U29:U103_B B 29 ? B 103 ? 16 1 1 A U 88 1_555 B U 98 1_555 -3.374 -2.005 -1.491 -17.475 -2.328 6.962 69 A_U88:U98_B A 88 ? B 98 ? 16 1 1 A C 89 1_555 B G 97 1_555 0.256 -0.327 -0.970 -0.349 10.837 -3.586 70 A_C89:G97_B A 89 ? B 97 ? 19 1 1 A C 90 1_555 B G 96 1_555 0.183 -0.382 -1.110 5.093 3.868 -1.613 71 A_C90:G96_B A 90 ? B 96 ? 19 1 1 A G 96 1_555 B C 90 1_555 0.035 -0.165 -1.075 -4.969 4.004 -1.594 72 A_G96:C90_B A 96 ? B 90 ? 19 1 1 A G 97 1_555 B C 89 1_555 0.039 -0.271 -0.893 0.512 10.910 -3.545 73 A_G97:C89_B A 97 ? B 89 ? 19 1 1 A U 98 1_555 B U 88 1_555 3.619 -2.173 -1.390 17.654 -2.417 7.015 74 A_U98:U88_B A 98 ? B 88 ? 16 1 1 B G 18 1_555 B C 102 1_555 -0.254 -0.320 0.847 -2.074 4.920 0.281 75 B_G18:C102_B B 18 ? B 102 ? 19 1 1 B U 19 1_555 B A 101 1_555 -0.181 -0.154 0.783 2.530 6.787 -2.696 76 B_U19:A101_B B 19 ? B 101 ? 20 1 1 B U 20 1_555 B A 100 1_555 -0.004 -0.209 0.640 6.379 3.725 -1.690 77 B_U20:A100_B B 20 ? B 100 ? 20 1 1 B C 30 1_555 B G 54 1_555 0.257 -0.269 -0.628 -0.328 8.718 -1.896 78 B_C30:G54_B B 30 ? B 54 ? 19 1 1 B U 31 1_555 B A 53 1_555 -0.024 -0.139 -0.584 4.667 7.243 -0.392 79 B_U31:A53_B B 31 ? B 53 ? 20 1 1 B G 32 1_555 B C 52 1_555 -0.126 -0.203 -0.049 4.796 8.980 -2.710 80 B_G32:C52_B B 32 ? B 52 ? 19 1 1 B G 33 1_555 B C 51 1_555 -0.085 -0.301 -0.973 -1.817 4.699 -2.210 81 B_G33:C51_B B 33 ? B 51 ? 19 1 1 B C 34 1_555 B G 50 1_555 0.006 -0.575 1.472 -5.773 -0.736 -4.689 82 B_C34:G50_B B 34 ? B 50 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 18 1_555 A C 102 1_555 A U 19 1_555 A A 101 1_555 -0.315 -1.815 2.969 0.644 0.355 36.015 -2.980 0.592 2.946 0.574 -1.041 36.022 1 AA_G18U19:A101C102_AA A 18 ? A 102 ? A 19 ? A 101 ? 1 A U 19 1_555 A A 101 1_555 A U 20 1_555 A A 100 1_555 0.492 -1.646 2.924 3.278 6.210 28.281 -4.427 -0.369 2.552 12.468 -6.582 29.122 2 AA_U19U20:A100A101_AA A 19 ? A 101 ? A 20 ? A 100 ? 1 A U 103 1_555 A U 29 1_555 A U 104 1_555 A A 28 1_555 0.181 -0.739 2.646 -11.447 3.766 41.117 -1.312 -1.157 2.440 5.229 15.892 42.773 3 AA_U103U104:A28U29_AA A 103 ? A 29 ? A 104 ? A 28 ? 1 A U 104 1_555 A A 28 1_555 A G 105 1_555 A C 27 1_555 -0.185 -2.144 2.539 3.604 1.419 24.192 -5.386 1.278 2.359 3.358 -8.530 24.496 4 AA_U104G105:C27A28_AA A 104 ? A 28 ? A 105 ? A 27 ? 1 A G 105 1_555 A C 27 1_555 A U 106 1_555 A A 26 1_555 -0.122 -1.740 2.912 0.440 0.470 31.950 -3.236 0.293 2.885 0.853 -0.799 31.957 5 AA_G105U106:A26C27_AA A 105 ? A 27 ? A 106 ? A 26 ? 1 A U 106 1_555 A A 26 1_555 A A 107 1_555 A U 25 1_555 0.199 -1.646 3.312 -1.702 7.620 30.447 -4.401 -0.672 2.813 14.218 3.177 31.409 6 AA_U106A107:U25A26_AA A 106 ? A 26 ? A 107 ? A 25 ? 1 A A 107 1_555 A U 25 1_555 A G 108 1_555 A C 24 1_555 0.245 -2.018 3.069 -2.395 3.022 27.565 -4.849 -1.028 2.805 6.303 4.995 27.829 7 AA_A107G108:C24U25_AA A 107 ? A 25 ? A 108 ? A 24 ? 1 A G 108 1_555 A C 24 1_555 A C 109 1_555 A G 23 1_555 -0.029 -2.034 3.110 -1.502 2.404 32.751 -3.976 -0.187 2.956 4.254 2.657 32.870 8 AA_G108C109:G23C24_AA A 108 ? A 24 ? A 109 ? A 23 ? 1 A C 109 1_555 A G 23 1_555 A G 110 1_555 A C 22 1_555 -0.094 -2.057 3.043 2.436 10.301 26.856 -6.009 0.632 2.109 21.163 -5.004 28.831 9 AA_C109G110:C22G23_AA A 109 ? A 23 ? A 110 ? A 22 ? 1 A G 110 1_555 A C 22 1_555 A C 111 1_555 A G 21 1_555 0.179 -2.078 2.910 1.729 2.580 37.804 -3.484 -0.083 2.772 3.974 -2.663 37.927 10 AA_G110C111:G21C22_AA A 110 ? A 22 ? A 111 ? A 21 ? 1 A C 111 1_555 A G 21 1_555 B G 1 1_555 B C 86 1_555 -0.321 -4.380 3.056 1.292 6.080 -21.337 8.792 -0.285 4.140 -15.989 3.399 -22.214 11 AB_C111G1:C86G21_BA A 111 ? A 21 ? B 1 ? B 86 ? 1 B G 1 1_555 B C 86 1_555 B G 2 1_555 B C 85 1_555 0.288 -1.838 2.839 -0.804 2.968 32.261 -3.734 -0.635 2.656 5.326 1.443 32.404 12 BB_G1G2:C85C86_BB B 1 ? B 86 ? B 2 ? B 85 ? 1 B G 2 1_555 B C 85 1_555 B G 3 1_555 B C 84 1_555 -0.038 -1.654 2.955 -1.327 2.456 31.691 -3.415 -0.145 2.821 4.486 2.425 31.810 13 BB_G2G3:C84C85_BB B 2 ? B 85 ? B 3 ? B 84 ? 1 B G 3 1_555 B C 84 1_555 B C 4 1_555 B G 83 1_555 0.507 -2.081 2.933 0.207 0.052 35.169 -3.451 -0.811 2.933 0.087 -0.343 35.170 14 BB_G3C4:G83C84_BB B 3 ? B 84 ? B 4 ? B 83 ? 1 B C 4 1_555 B G 83 1_555 B C 5 1_555 B G 82 1_555 -0.084 -1.578 2.984 6.498 7.514 34.408 -3.502 0.943 2.537 12.385 -10.711 35.771 15 BB_C4C5:G82G83_BB B 4 ? B 83 ? B 5 ? B 82 ? 1 B C 5 1_555 B G 82 1_555 B A 6 1_555 B U 81 1_555 -0.844 -1.868 2.992 -7.498 2.496 25.919 -4.574 0.046 2.927 5.407 16.243 27.077 16 BB_C5A6:U81G82_BB B 5 ? B 82 ? B 6 ? B 81 ? 1 B A 6 1_555 B U 81 1_555 B C 7 1_555 B G 80 1_555 0.720 -2.001 3.025 -1.583 1.607 32.005 -3.882 -1.559 2.885 2.910 2.866 32.083 17 BB_A6C7:G80U81_BB B 6 ? B 81 ? B 7 ? B 80 ? 1 B C 7 1_555 B G 80 1_555 B U 8 1_555 B A 79 1_555 -0.336 -1.638 2.943 0.001 4.246 34.694 -3.287 0.560 2.730 7.087 -0.002 34.945 18 BB_C7U8:A79G80_BB B 7 ? B 80 ? B 8 ? B 79 ? 1 B U 8 1_555 B A 79 1_555 B G 9 1_555 B C 78 1_555 0.309 -1.885 3.606 11.091 8.782 28.467 -5.131 1.560 2.839 16.624 -20.995 31.723 19 BB_U8G9:C78A79_BB B 8 ? B 79 ? B 9 ? B 78 ? 1 B G 9 1_555 B C 78 1_555 B U 10 1_555 B C 77 1_555 0.123 -1.775 3.029 -3.484 7.794 25.706 -5.464 -1.011 2.361 16.933 7.568 27.064 20 BB_G9U10:C77C78_BB B 9 ? B 78 ? B 10 ? B 77 ? 1 B U 10 1_555 B C 77 1_555 B U 11 1_555 B A 76 1_555 -0.515 -1.448 3.044 5.435 5.723 49.361 -2.089 0.965 2.802 6.802 -6.460 49.949 21 BB_U10U11:A76C77_BB B 10 ? B 77 ? B 11 ? B 76 ? 1 B U 11 1_555 B A 76 1_555 B C 14 1_555 B G 75 1_555 0.043 -1.938 4.267 10.056 8.587 49.146 -3.020 0.841 3.839 10.114 -11.844 50.787 22 BB_U11C14:G75A76_BB B 11 ? B 76 ? B 14 ? B 75 ? 1 B C 14 1_555 B G 75 1_555 B A 15 1_555 B U 74 1_555 -1.160 -1.526 3.221 9.889 2.308 36.623 -2.620 2.954 2.730 3.589 -15.378 37.958 23 BB_C14A15:U74G75_BB B 14 ? B 75 ? B 15 ? B 74 ? 1 B A 15 1_555 B U 74 1_555 B C 16 1_555 B U 73 1_555 -0.537 -1.823 3.156 -5.522 1.068 31.854 -3.457 0.018 3.141 1.927 9.965 32.334 24 BB_A15C16:U73U74_BB B 15 ? B 74 ? B 16 ? B 73 ? 1 B C 16 1_555 B U 73 1_555 B U 17 1_555 B A 72 1_555 0.369 -1.548 3.177 -1.078 2.210 39.790 -2.514 -0.660 3.080 3.243 1.582 39.863 25 BB_C16U17:A72U73_BB B 16 ? B 73 ? B 17 ? B 72 ? 1 B U 17 1_555 B A 72 1_555 B C 56 1_555 B G 71 1_555 0.016 -1.859 2.777 5.119 -0.342 36.974 -2.866 0.551 2.771 -0.536 -8.025 37.316 26 BB_U17C56:G71A72_BB B 17 ? B 72 ? B 56 ? B 71 ? 1 B C 56 1_555 B G 71 1_555 B C 57 1_555 B G 70 1_555 -0.281 -1.880 2.883 0.989 0.615 27.496 -4.083 0.802 2.829 1.294 -2.081 27.520 27 BB_C56C57:G70G71_BB B 56 ? B 71 ? B 57 ? B 70 ? 1 B C 57 1_555 B G 70 1_555 B A 58 1_555 B U 69 1_555 -0.161 -1.796 3.012 2.828 18.237 34.687 -4.415 0.510 1.858 28.251 -4.382 39.157 28 BB_C57A58:U69G70_BB B 57 ? B 70 ? B 58 ? B 69 ? 1 B A 58 1_555 B U 69 1_555 B C 59 1_555 B G 68 1_555 0.058 -2.081 3.078 -1.884 1.041 32.817 -3.841 -0.402 3.004 1.841 3.330 32.885 29 BB_A58C59:G68U69_BB B 58 ? B 69 ? B 59 ? B 68 ? 1 B C 59 1_555 B G 68 1_555 B A 60 1_555 B U 67 1_555 -0.287 -1.111 3.652 7.002 2.164 34.132 -2.213 1.644 3.453 3.635 -11.761 34.887 30 BB_C59A60:U67G68_BB B 59 ? B 68 ? B 60 ? B 67 ? 1 B A 60 1_555 B U 67 1_555 B C 61 1_555 B G 66 1_555 0.799 -1.563 3.144 3.450 1.296 30.815 -3.162 -0.854 3.146 2.428 -6.463 31.029 31 BB_A60C61:G66U67_BB B 60 ? B 67 ? B 61 ? B 66 ? 1 A C 30 1_555 A G 54 1_555 A U 31 1_555 A A 53 1_555 0.335 -1.456 2.962 2.213 8.376 27.988 -4.415 -0.257 2.451 16.815 -4.442 29.272 32 AA_C30U31:A53G54_AA A 30 ? A 54 ? A 31 ? A 53 ? 1 A U 31 1_555 A A 53 1_555 A G 32 1_555 A C 52 1_555 -0.466 -1.666 3.171 -0.869 7.345 31.360 -4.203 0.698 2.732 13.356 1.581 32.199 33 AA_U31G32:C52A53_AA A 31 ? A 53 ? A 32 ? A 52 ? 1 A G 32 1_555 A C 52 1_555 A G 33 1_555 A C 51 1_555 0.719 -1.694 3.389 5.360 1.586 32.547 -3.262 -0.319 3.377 2.804 -9.476 33.011 34 AA_G32G33:C51C52_AA A 32 ? A 52 ? A 33 ? A 51 ? 1 A G 33 1_555 A C 51 1_555 A C 34 1_555 A G 50 1_555 0.233 -2.466 4.253 0.170 1.606 35.839 -4.298 -0.346 4.143 2.608 -0.277 35.875 35 AA_G33C34:G50C51_AA A 33 ? A 51 ? A 34 ? A 50 ? 1 A G 66 1_555 A C 61 1_555 A U 67 1_555 A A 60 1_555 -0.799 -1.563 3.144 -3.437 1.307 30.826 -3.162 0.856 3.145 2.448 6.437 31.039 36 AA_G66U67:A60C61_AA A 66 ? A 61 ? A 67 ? A 60 ? 1 A U 67 1_555 A A 60 1_555 A G 68 1_555 A C 59 1_555 0.287 -1.110 3.652 -7.011 2.176 34.123 -2.215 -1.646 3.452 3.656 11.778 34.880 37 AA_U67G68:C59A60_AA A 67 ? A 60 ? A 68 ? A 59 ? 1 A G 68 1_555 A C 59 1_555 A U 69 1_555 A A 58 1_555 -0.059 -2.081 3.079 1.874 1.038 32.823 -3.841 0.401 3.006 1.834 -3.312 32.891 38 AA_G68U69:A58C59_AA A 68 ? A 59 ? A 69 ? A 58 ? 1 A U 69 1_555 A A 58 1_555 A G 70 1_555 A C 57 1_555 0.161 -1.796 3.012 -2.819 18.229 34.684 -4.415 -0.509 1.858 28.243 4.368 39.151 39 AA_U69G70:C57A58_AA A 69 ? A 58 ? A 70 ? A 57 ? 1 A G 70 1_555 A C 57 1_555 A G 71 1_555 A C 56 1_555 0.281 -1.880 2.881 -0.997 0.624 27.497 -4.085 -0.803 2.827 1.312 2.096 27.522 40 AA_G70G71:C56C57_AA A 70 ? A 57 ? A 71 ? A 56 ? 1 A G 71 1_555 A C 56 1_555 A A 72 1_555 A U 17 1_555 -0.016 -1.859 2.778 -5.119 -0.356 36.974 -2.865 -0.551 2.772 -0.558 8.024 37.316 41 AA_G71A72:U17C56_AA A 71 ? A 56 ? A 72 ? A 17 ? 1 A A 72 1_555 A U 17 1_555 A U 73 1_555 A C 16 1_555 -0.368 -1.548 3.178 1.074 2.225 39.794 -2.516 0.658 3.080 3.265 -1.576 39.868 42 AA_A72U73:C16U17_AA A 72 ? A 17 ? A 73 ? A 16 ? 1 A U 73 1_555 A C 16 1_555 A U 74 1_555 A A 15 1_555 0.536 -1.823 3.155 5.528 1.055 31.848 -3.455 -0.015 3.141 1.904 -9.976 32.328 43 AA_U73U74:A15C16_AA A 73 ? A 16 ? A 74 ? A 15 ? 1 A U 74 1_555 A A 15 1_555 A G 75 1_555 A C 14 1_555 1.160 -1.526 3.221 -9.890 2.321 36.624 -2.621 -2.953 2.730 3.610 15.378 37.960 44 AA_U74G75:C14A15_AA A 74 ? A 15 ? A 75 ? A 14 ? 1 A G 75 1_555 A C 14 1_555 A A 76 1_555 A U 11 1_555 -0.044 -1.938 4.267 -10.069 8.588 49.149 -3.020 -0.841 3.838 10.114 11.859 50.792 45 AA_G75A76:U11C14_AA A 75 ? A 14 ? A 76 ? A 11 ? 1 A A 76 1_555 A U 11 1_555 A C 77 1_555 A U 10 1_555 0.515 -1.448 3.044 -5.426 5.715 49.348 -2.089 -0.964 2.803 6.794 6.451 49.934 46 AA_A76C77:U10U11_AA A 76 ? A 11 ? A 77 ? A 10 ? 1 A C 77 1_555 A U 10 1_555 A C 78 1_555 A G 9 1_555 -0.123 -1.774 3.029 3.469 7.797 25.715 -5.462 1.006 2.362 16.935 -7.534 27.072 47 AA_C77C78:G9U10_AA A 77 ? A 10 ? A 78 ? A 9 ? 1 A C 78 1_555 A G 9 1_555 A A 79 1_555 A U 8 1_555 -0.309 -1.885 3.606 -11.080 8.789 28.468 -5.132 -1.558 2.839 16.637 20.974 31.723 48 AA_C78A79:U8G9_AA A 78 ? A 9 ? A 79 ? A 8 ? 1 A A 79 1_555 A U 8 1_555 A G 80 1_555 A C 7 1_555 0.336 -1.638 2.943 -0.009 4.245 34.698 -3.286 -0.561 2.729 7.084 0.015 34.948 49 AA_A79G80:C7U8_AA A 79 ? A 8 ? A 80 ? A 7 ? 1 A G 80 1_555 A C 7 1_555 A U 81 1_555 A A 6 1_555 -0.720 -2.001 3.024 1.592 1.605 31.996 -3.882 1.562 2.884 2.907 -2.884 32.073 50 AA_G80U81:A6C7_AA A 80 ? A 7 ? A 81 ? A 6 ? 1 A U 81 1_555 A A 6 1_555 A G 82 1_555 A C 5 1_555 0.845 -1.868 2.993 7.481 2.510 25.925 -4.578 -0.051 2.927 5.438 -16.203 27.080 51 AA_U81G82:C5A6_AA A 81 ? A 6 ? A 82 ? A 5 ? 1 A G 82 1_555 A C 5 1_555 A G 83 1_555 A C 4 1_555 0.083 -1.579 2.984 -6.497 7.509 34.405 -3.503 -0.942 2.538 12.380 10.711 35.767 52 AA_G82G83:C4C5_AA A 82 ? A 5 ? A 83 ? A 4 ? 1 A G 83 1_555 A C 4 1_555 A C 84 1_555 A G 3 1_555 -0.507 -2.080 2.933 -0.199 0.043 35.173 -3.448 0.812 2.933 0.071 0.329 35.173 53 AA_G83C84:G3C4_AA A 83 ? A 4 ? A 84 ? A 3 ? 1 A C 84 1_555 A G 3 1_555 A C 85 1_555 A G 2 1_555 0.038 -1.654 2.955 1.321 2.454 31.679 -3.415 0.144 2.822 4.485 -2.414 31.799 54 AA_C84C85:G2G3_AA A 84 ? A 3 ? A 85 ? A 2 ? 1 A C 85 1_555 A G 2 1_555 A C 86 1_555 A G 1 1_555 -0.287 -1.838 2.840 0.811 2.976 32.267 -3.735 0.635 2.656 5.340 -1.455 32.411 55 AA_C85C86:G1G2_AA A 85 ? A 2 ? A 86 ? A 1 ? 1 A C 86 1_555 A G 1 1_555 B G 21 1_555 B C 111 1_555 0.016 -4.342 3.135 -1.485 6.074 -21.326 8.650 -0.600 4.185 -15.977 -3.906 -22.213 56 AB_C86G21:C111G1_BA A 86 ? A 1 ? B 21 ? B 111 ? 1 B G 21 1_555 B C 111 1_555 B C 22 1_555 B G 110 1_555 -0.179 -2.078 2.909 -1.738 2.586 37.799 -3.485 0.082 2.771 3.984 2.677 37.922 57 BB_G21C22:G110C111_BB B 21 ? B 111 ? B 22 ? B 110 ? 1 B C 22 1_555 B G 110 1_555 B G 23 1_555 B C 109 1_555 0.094 -2.057 3.044 -2.433 10.284 26.866 -6.007 -0.633 2.112 21.124 4.999 28.834 58 BB_C22G23:C109G110_BB B 22 ? B 110 ? B 23 ? B 109 ? 1 B G 23 1_555 B C 109 1_555 B C 24 1_555 B G 108 1_555 0.030 -2.034 3.110 1.507 2.421 32.744 -3.979 0.187 2.954 4.285 -2.667 32.864 59 BB_G23C24:G108C109_BB B 23 ? B 109 ? B 24 ? B 108 ? 1 B C 24 1_555 B G 108 1_555 B U 25 1_555 B A 107 1_555 -0.245 -2.018 3.070 2.385 3.011 27.573 -4.846 1.025 2.807 6.278 -4.974 27.834 60 BB_C24U25:A107G108_BB B 24 ? B 108 ? B 25 ? B 107 ? 1 B U 25 1_555 B A 107 1_555 B A 26 1_555 B U 106 1_555 -0.199 -1.646 3.312 1.707 7.616 30.438 -4.402 0.673 2.812 14.214 -3.186 31.399 61 BB_U25A26:U106A107_BB B 25 ? B 107 ? B 26 ? B 106 ? 1 B A 26 1_555 B U 106 1_555 B C 27 1_555 B G 105 1_555 0.122 -1.740 2.912 -0.435 0.481 31.952 -3.238 -0.291 2.884 0.873 0.791 31.958 62 BB_A26C27:G105U106_BB B 26 ? B 106 ? B 27 ? B 105 ? 1 B C 27 1_555 B G 105 1_555 B A 28 1_555 B U 104 1_555 0.185 -2.144 2.540 -3.598 1.398 24.201 -5.378 -1.277 2.362 3.306 8.513 24.503 63 BB_C27A28:U104G105_BB B 27 ? B 105 ? B 28 ? B 104 ? 1 B A 28 1_555 B U 104 1_555 B U 29 1_555 B U 103 1_555 -0.180 -0.739 2.646 11.451 3.790 41.111 -1.314 1.157 2.439 5.262 -15.898 42.770 64 BB_A28U29:U103U104_BB B 28 ? B 104 ? B 29 ? B 103 ? 1 A U 88 1_555 B U 98 1_555 A C 89 1_555 B G 97 1_555 -0.371 -0.692 2.771 -0.679 4.853 43.639 -1.310 0.442 2.688 6.504 0.910 43.900 65 AA_U88C89:G97U98_BB A 88 ? B 98 ? A 89 ? B 97 ? 1 A C 89 1_555 B G 97 1_555 A C 90 1_555 B G 96 1_555 0.354 -1.328 2.937 3.998 7.579 32.002 -3.430 -0.041 2.588 13.448 -7.095 33.101 66 AA_C89C90:G96G97_BB A 89 ? B 97 ? A 90 ? B 96 ? 1 A G 96 1_555 B C 90 1_555 A G 97 1_555 B C 89 1_555 -0.354 -1.328 2.938 -3.981 7.582 32.001 -3.431 0.043 2.588 13.454 7.064 33.098 67 AA_G96G97:C89C90_BB A 96 ? B 90 ? A 97 ? B 89 ? 1 A G 97 1_555 B C 89 1_555 A U 98 1_555 B U 88 1_555 0.370 -0.690 2.770 0.672 4.861 43.647 -1.309 -0.442 2.687 6.513 -0.900 43.908 68 AA_G97U98:U88C89_BB A 97 ? B 89 ? A 98 ? B 88 ? 1 B G 18 1_555 B C 102 1_555 B U 19 1_555 B A 101 1_555 -0.315 -1.815 2.969 0.657 0.357 36.011 -2.981 0.594 2.946 0.578 -1.062 36.018 69 BB_G18U19:A101C102_BB B 18 ? B 102 ? B 19 ? B 101 ? 1 B U 19 1_555 B A 101 1_555 B U 20 1_555 B A 100 1_555 0.491 -1.646 2.924 3.270 6.230 28.282 -4.429 -0.370 2.550 12.507 -6.564 29.127 70 BB_U19U20:A100A101_BB B 19 ? B 101 ? B 20 ? B 100 ? 1 B C 30 1_555 B G 54 1_555 B U 31 1_555 B A 53 1_555 0.334 -1.456 2.962 2.215 8.378 27.983 -4.417 -0.255 2.451 16.822 -4.447 29.268 71 BB_C30U31:A53G54_BB B 30 ? B 54 ? B 31 ? B 53 ? 1 B U 31 1_555 B A 53 1_555 B G 32 1_555 B C 52 1_555 -0.466 -1.666 3.172 -0.864 7.323 31.372 -4.198 0.698 2.735 13.313 1.571 32.206 72 BB_U31G32:C52A53_BB B 31 ? B 53 ? B 32 ? B 52 ? 1 B G 32 1_555 B C 52 1_555 B G 33 1_555 B C 51 1_555 0.720 -1.695 3.388 5.357 1.582 32.541 -3.263 -0.321 3.376 2.797 -9.472 33.004 73 BB_G32G33:C51C52_BB B 32 ? B 52 ? B 33 ? B 51 ? 1 B G 33 1_555 B C 51 1_555 B C 34 1_555 B G 50 1_555 0.233 -2.466 4.253 0.183 1.617 35.843 -4.300 -0.345 4.143 2.626 -0.297 35.879 74 BB_G33C34:G50C51_BB B 33 ? B 51 ? B 34 ? B 50 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9DIB # _atom_sites.entry_id 9DII _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_ # loop_ #