HEADER HYDROLASE 25-SEP-24 9DR8 TITLE CRYSTAL STRUCTURE OF CATECHOL 1,2-DIOXYGENASE FROM BURKHOLDERIA TITLE 2 MULTIVORANS (IRON BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATECHOL 1,2-DIOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BUMUA.00117.A.B1; COMPND 5 EC: 1.13.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA MULTIVORANS ATCC 17616; SOURCE 3 ORGANISM_TAXID: 395019; SOURCE 4 GENE: CATA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BUMUA.00117.A.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, CATECHOL 1, 2-DIOXYGENASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 09-OCT-24 9DR8 0 JRNL AUTH L.LIU,P.ENAYATI,S.LOVELL,G.W.BUCHKO,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF CATECHOL 1,2-DIOXYGENASE FROM JRNL TITL 2 BURKHOLDERIA MULTIVORANS (IRON BOUND) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_5449: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 135355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 6709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.6800 - 4.4100 1.00 4452 238 0.1599 0.1664 REMARK 3 2 4.4100 - 3.5000 0.99 4333 224 0.1300 0.1445 REMARK 3 3 3.5000 - 3.0600 1.00 4351 199 0.1434 0.1767 REMARK 3 4 3.0600 - 2.7800 1.00 4317 237 0.1407 0.1678 REMARK 3 5 2.7800 - 2.5800 1.00 4353 217 0.1391 0.1754 REMARK 3 6 2.5800 - 2.4300 1.00 4256 238 0.1319 0.1658 REMARK 3 7 2.4300 - 2.3100 1.00 4298 238 0.1321 0.1597 REMARK 3 8 2.3100 - 2.2100 1.00 4328 218 0.1303 0.1716 REMARK 3 9 2.2100 - 2.1200 1.00 4271 209 0.1338 0.1589 REMARK 3 10 2.1200 - 2.0500 1.00 4351 193 0.1362 0.1643 REMARK 3 11 2.0500 - 1.9800 1.00 4274 224 0.1345 0.1602 REMARK 3 12 1.9800 - 1.9300 1.00 4284 225 0.1346 0.1695 REMARK 3 13 1.9300 - 1.8800 1.00 4244 247 0.1424 0.1915 REMARK 3 14 1.8800 - 1.8300 1.00 4314 236 0.1494 0.2014 REMARK 3 15 1.8300 - 1.7900 1.00 4238 245 0.1475 0.1850 REMARK 3 16 1.7900 - 1.7500 1.00 4232 212 0.1381 0.1775 REMARK 3 17 1.7500 - 1.7200 1.00 4293 217 0.1404 0.1747 REMARK 3 18 1.7200 - 1.6800 1.00 4316 194 0.1370 0.1821 REMARK 3 19 1.6800 - 1.6500 1.00 4284 229 0.1374 0.1670 REMARK 3 20 1.6500 - 1.6300 1.00 4213 202 0.1372 0.1751 REMARK 3 21 1.6300 - 1.6000 1.00 4364 218 0.1436 0.1811 REMARK 3 22 1.6000 - 1.5700 1.00 4240 229 0.1459 0.1812 REMARK 3 23 1.5700 - 1.5500 1.00 4265 221 0.1488 0.2130 REMARK 3 24 1.5500 - 1.5300 1.00 4331 199 0.1616 0.2083 REMARK 3 25 1.5300 - 1.5100 1.00 4158 248 0.1719 0.2137 REMARK 3 26 1.5100 - 1.4900 1.00 4286 229 0.1834 0.2118 REMARK 3 27 1.4900 - 1.4700 1.00 4194 243 0.2009 0.2451 REMARK 3 28 1.4700 - 1.4500 1.00 4268 216 0.2022 0.2137 REMARK 3 29 1.4500 - 1.4400 0.99 4272 212 0.2293 0.2828 REMARK 3 30 1.4400 - 1.4200 1.00 4266 252 0.2508 0.2847 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5030 REMARK 3 ANGLE : 0.807 6851 REMARK 3 CHIRALITY : 0.075 750 REMARK 3 PLANARITY : 0.012 916 REMARK 3 DIHEDRAL : 12.853 1909 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DR8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000288651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 135545 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 120.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.14300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) 4000, 0.2M CACL2, 0.1M TRIS REMARK 280 8.5, BUMUA.00107.D.A2.PW32075 AT 21.7 MG/ML. PLATE LIU-S-128 B7. REMARK 280 PROTEIN PREPARED IN THE PRESENCE OF FECL2. PUCK: PSL-1602, CRYO: REMARK 280 32% (W/V) 4000, 0.2M CACL2, 0.1M TRIS 8.5, PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.73350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.16350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.73350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.16350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 311 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 146 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 24 161.72 -48.64 REMARK 500 HIS A 166 -3.83 79.81 REMARK 500 ASP B 7 48.40 -88.82 REMARK 500 HIS B 166 -5.92 78.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 93 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 960 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 ASP A 267 OD2 55.2 REMARK 620 3 HOH A 617 O 81.3 96.5 REMARK 620 4 HOH A 673 O 77.6 47.5 143.9 REMARK 620 5 HOH A 811 O 74.0 102.5 131.3 69.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 125 O REMARK 620 2 HOH A 528 O 64.3 REMARK 620 3 HOH A 672 O 76.3 120.3 REMARK 620 4 HOH A 753 O 89.0 146.8 67.0 REMARK 620 5 HOH A 860 O 99.8 68.7 76.4 139.0 REMARK 620 6 HOH A 953 O 164.9 129.0 89.4 80.7 81.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 164 OH REMARK 620 2 TYR A 200 OH 102.2 REMARK 620 3 HIS A 224 NE2 97.9 91.9 REMARK 620 4 HIS A 226 NE2 100.2 157.3 88.8 REMARK 620 5 HOH A 545 O 125.3 78.3 136.8 85.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 654 O REMARK 620 2 HOH A 743 O 76.2 REMARK 620 3 HOH A 745 O 79.5 110.2 REMARK 620 4 HOH A 897 O 75.3 141.0 90.1 REMARK 620 5 HOH B 814 O 140.7 74.8 86.2 141.6 REMARK 620 6 HOH B 891 O 98.8 78.2 170.5 80.4 100.7 REMARK 620 7 HOH B 940 O 146.3 137.4 84.5 75.3 66.3 92.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 663 O REMARK 620 2 HOH A 676 O 69.0 REMARK 620 3 HOH B 679 O 82.6 138.2 REMARK 620 4 HOH B 718 O 96.3 79.6 73.5 REMARK 620 5 HOH B 939 O 173.8 115.4 91.3 80.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 127 OD1 REMARK 620 2 HOH B 506 O 133.0 REMARK 620 3 HOH B 522 O 146.4 49.1 REMARK 620 4 HOH B 581 O 84.1 49.0 89.4 REMARK 620 5 HOH B 640 O 140.2 74.3 72.0 113.9 REMARK 620 6 HOH B 685 O 75.5 97.1 136.3 82.7 72.3 REMARK 620 7 HOH B 734 O 89.2 136.9 92.1 170.0 76.0 102.8 REMARK 620 8 HOH B 813 O 81.3 95.3 65.8 90.4 130.7 156.4 81.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 164 OH REMARK 620 2 TYR B 200 OH 103.4 REMARK 620 3 HIS B 224 NE2 98.4 90.6 REMARK 620 4 HIS B 226 NE2 98.6 157.6 90.2 REMARK 620 5 HOH B 524 O 124.9 75.7 136.4 88.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 513 O REMARK 620 2 HOH B 592 O 83.7 REMARK 620 3 HOH B 661 O 109.9 72.0 REMARK 620 4 HOH B 788 O 72.2 128.1 74.2 REMARK 620 5 HOH B 836 O 154.3 77.7 81.0 133.4 REMARK 620 6 HOH B 931 O 75.5 84.4 154.7 129.6 85.1 REMARK 620 7 HOH B 943 O 115.0 152.5 115.8 78.6 77.7 81.5 REMARK 620 N 1 2 3 4 5 6 DBREF1 9DR8 A 1 311 UNP A0A0H3KXJ8_BURM1 DBREF2 9DR8 A A0A0H3KXJ8 1 311 DBREF1 9DR8 B 1 311 UNP A0A0H3KXJ8_BURM1 DBREF2 9DR8 B A0A0H3KXJ8 1 311 SEQADV 9DR8 MET A -7 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 ALA A -6 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A -5 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A -4 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A -3 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A -2 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A -1 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS A 0 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 MET B -7 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 ALA B -6 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B -5 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B -4 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B -3 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B -2 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B -1 UNP A0A0H3KXJ EXPRESSION TAG SEQADV 9DR8 HIS B 0 UNP A0A0H3KXJ EXPRESSION TAG SEQRES 1 A 319 MET ALA HIS HIS HIS HIS HIS HIS MET SER VAL LYS VAL SEQRES 2 A 319 PHE ASP THR LYS GLU VAL GLN ASP LEU LEU LYS ALA ALA SEQRES 3 A 319 ALA ASN LEU ASN GLY ASP ALA GLY ASN ALA ARG PHE ARG SEQRES 4 A 319 GLN ILE VAL HIS ARG LEU LEU SER ASP LEU PHE LYS ALA SEQRES 5 A 319 ILE ASP ASP LEU ASP ILE THR PRO ASP GLU VAL TRP ALA SEQRES 6 A 319 GLY VAL ASN TYR LEU ASN LYS LEU GLY GLN ASP GLY GLU SEQRES 7 A 319 ALA ALA LEU LEU ALA ALA GLY ILE GLY LEU GLU LYS TYR SEQRES 8 A 319 LEU ASP ILE ARG MET ASP ALA ALA ASP ARG ALA ALA GLY SEQRES 9 A 319 LEU ASP GLY GLY THR PRO ARG THR ILE GLU GLY PRO LEU SEQRES 10 A 319 TYR VAL ALA GLY ALA PRO VAL ARG ASP GLY VAL ALA LYS SEQRES 11 A 319 ILE ASP LEU ASP ASP ASP ALA ASP ALA GLY PRO LEU VAL SEQRES 12 A 319 ILE ARG GLY THR VAL THR GLY THR ASP GLY LYS PRO LEU SEQRES 13 A 319 ALA GLY ALA LEU VAL GLU CYS TRP HIS ALA ASN SER LYS SEQRES 14 A 319 GLY PHE TYR SER HIS PHE ASP PRO THR GLY ALA GLN THR SEQRES 15 A 319 ALA PHE ASN LEU ARG GLY ALA VAL ARG THR ASP ALA ASN SEQRES 16 A 319 GLY LYS TYR GLU PHE ARG THR LEU MET PRO VAL GLY TYR SEQRES 17 A 319 GLY CYS PRO PRO GLN GLY ALA THR GLN GLN LEU LEU ASN SEQRES 18 A 319 GLY LEU GLY ARG HIS GLY ASN ARG PRO ALA HIS VAL HIS SEQRES 19 A 319 PHE PHE VAL SER GLY ASP GLY HIS ARG LYS LEU THR THR SEQRES 20 A 319 GLN PHE ASN ILE GLU GLY ASP PRO LEU ILE TRP ASP ASP SEQRES 21 A 319 PHE ALA TYR ALA THR ARG GLU GLU LEU ILE PRO HIS VAL SEQRES 22 A 319 VAL ASP LYS THR GLY GLY ALA ALA LEU GLY MET LYS SER SEQRES 23 A 319 ASP ALA TYR LYS GLU ILE GLU PHE ASP ILE VAL LEU THR SEQRES 24 A 319 PRO LEU LEU ASP GLY ARG ASP ASN GLN VAL VAL HIS ARG SEQRES 25 A 319 PRO ARG ALA SER ALA ASP ALA SEQRES 1 B 319 MET ALA HIS HIS HIS HIS HIS HIS MET SER VAL LYS VAL SEQRES 2 B 319 PHE ASP THR LYS GLU VAL GLN ASP LEU LEU LYS ALA ALA SEQRES 3 B 319 ALA ASN LEU ASN GLY ASP ALA GLY ASN ALA ARG PHE ARG SEQRES 4 B 319 GLN ILE VAL HIS ARG LEU LEU SER ASP LEU PHE LYS ALA SEQRES 5 B 319 ILE ASP ASP LEU ASP ILE THR PRO ASP GLU VAL TRP ALA SEQRES 6 B 319 GLY VAL ASN TYR LEU ASN LYS LEU GLY GLN ASP GLY GLU SEQRES 7 B 319 ALA ALA LEU LEU ALA ALA GLY ILE GLY LEU GLU LYS TYR SEQRES 8 B 319 LEU ASP ILE ARG MET ASP ALA ALA ASP ARG ALA ALA GLY SEQRES 9 B 319 LEU ASP GLY GLY THR PRO ARG THR ILE GLU GLY PRO LEU SEQRES 10 B 319 TYR VAL ALA GLY ALA PRO VAL ARG ASP GLY VAL ALA LYS SEQRES 11 B 319 ILE ASP LEU ASP ASP ASP ALA ASP ALA GLY PRO LEU VAL SEQRES 12 B 319 ILE ARG GLY THR VAL THR GLY THR ASP GLY LYS PRO LEU SEQRES 13 B 319 ALA GLY ALA LEU VAL GLU CYS TRP HIS ALA ASN SER LYS SEQRES 14 B 319 GLY PHE TYR SER HIS PHE ASP PRO THR GLY ALA GLN THR SEQRES 15 B 319 ALA PHE ASN LEU ARG GLY ALA VAL ARG THR ASP ALA ASN SEQRES 16 B 319 GLY LYS TYR GLU PHE ARG THR LEU MET PRO VAL GLY TYR SEQRES 17 B 319 GLY CYS PRO PRO GLN GLY ALA THR GLN GLN LEU LEU ASN SEQRES 18 B 319 GLY LEU GLY ARG HIS GLY ASN ARG PRO ALA HIS VAL HIS SEQRES 19 B 319 PHE PHE VAL SER GLY ASP GLY HIS ARG LYS LEU THR THR SEQRES 20 B 319 GLN PHE ASN ILE GLU GLY ASP PRO LEU ILE TRP ASP ASP SEQRES 21 B 319 PHE ALA TYR ALA THR ARG GLU GLU LEU ILE PRO HIS VAL SEQRES 22 B 319 VAL ASP LYS THR GLY GLY ALA ALA LEU GLY MET LYS SER SEQRES 23 B 319 ASP ALA TYR LYS GLU ILE GLU PHE ASP ILE VAL LEU THR SEQRES 24 B 319 PRO LEU LEU ASP GLY ARG ASP ASN GLN VAL VAL HIS ARG SEQRES 25 B 319 PRO ARG ALA SER ALA ASP ALA HET 2PE A 401 28 HET FE A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET 12P B 401 37 HET FE B 402 1 HET CA B 403 1 HET CA B 404 1 HET CA B 405 1 HETNAM 2PE NONAETHYLENE GLYCOL HETNAM FE FE (III) ION HETNAM CA CALCIUM ION HETNAM 12P DODECAETHYLENE GLYCOL HETSYN 12P POLYETHYLENE GLYCOL PEG400 FORMUL 3 2PE C18 H38 O10 FORMUL 4 FE 2(FE 3+) FORMUL 5 CA 7(CA 2+) FORMUL 9 12P C24 H50 O13 FORMUL 14 HOH *918(H2 O) HELIX 1 AA1 THR A 8 ALA A 19 1 12 HELIX 2 AA2 ASN A 27 ASP A 49 1 23 HELIX 3 AA3 THR A 51 ASP A 68 1 18 HELIX 4 AA4 GLU A 70 ILE A 78 1 9 HELIX 5 AA5 GLY A 79 ALA A 95 1 17 HELIX 6 AA6 GLY A 206 GLY A 216 1 11 HELIX 7 AA7 ARG A 258 ILE A 262 5 5 HELIX 8 AA8 GLY A 270 GLY A 275 5 6 HELIX 9 AA9 THR B 8 ALA B 19 1 12 HELIX 10 AB1 ASN B 27 ASP B 49 1 23 HELIX 11 AB2 THR B 51 ASP B 68 1 18 HELIX 12 AB3 GLU B 70 ILE B 78 1 9 HELIX 13 AB4 GLY B 79 GLY B 96 1 18 HELIX 14 AB5 GLY B 206 GLY B 216 1 11 HELIX 15 AB6 ARG B 258 ILE B 262 5 5 HELIX 16 AB7 GLY B 270 GLY B 275 5 6 SHEET 1 AA1 2 VAL A 111 ALA A 112 0 SHEET 2 AA1 2 ALA A 307 SER A 308 1 O ALA A 307 N ALA A 112 SHEET 1 AA2 5 VAL A 116 ASP A 118 0 SHEET 2 AA2 5 ARG A 179 ARG A 183 1 O ARG A 183 N ARG A 117 SHEET 3 AA2 5 LEU A 152 TRP A 156 -1 N VAL A 153 O VAL A 182 SHEET 4 AA2 5 HIS A 224 SER A 230 -1 O PHE A 228 N GLU A 154 SHEET 5 AA2 5 LEU A 237 ASN A 242 -1 O LEU A 237 N VAL A 229 SHEET 1 AA3 5 VAL A 120 LYS A 122 0 SHEET 2 AA3 5 LYS A 189 LEU A 195 1 O ARG A 193 N ALA A 121 SHEET 3 AA3 5 PRO A 133 GLY A 142 -1 N LEU A 134 O THR A 194 SHEET 4 AA3 5 TYR A 281 GLU A 285 1 O ILE A 284 N VAL A 135 SHEET 5 AA3 5 VAL A 265 LYS A 268 -1 N LYS A 268 O TYR A 281 SHEET 1 AA4 4 VAL A 120 LYS A 122 0 SHEET 2 AA4 4 LYS A 189 LEU A 195 1 O ARG A 193 N ALA A 121 SHEET 3 AA4 4 PRO A 133 GLY A 142 -1 N LEU A 134 O THR A 194 SHEET 4 AA4 4 ILE A 288 LEU A 290 1 O LEU A 290 N THR A 141 SHEET 1 AA5 2 TYR A 200 GLY A 201 0 SHEET 2 AA5 2 ASN A 220 ARG A 221 -1 O ARG A 221 N TYR A 200 SHEET 1 AA6 2 VAL B 111 ALA B 112 0 SHEET 2 AA6 2 ALA B 307 SER B 308 1 O ALA B 307 N ALA B 112 SHEET 1 AA7 5 VAL B 116 ASP B 118 0 SHEET 2 AA7 5 ARG B 179 ARG B 183 1 O ARG B 183 N ARG B 117 SHEET 3 AA7 5 LEU B 152 TRP B 156 -1 N VAL B 153 O VAL B 182 SHEET 4 AA7 5 HIS B 224 SER B 230 -1 O PHE B 228 N GLU B 154 SHEET 5 AA7 5 LEU B 237 ASN B 242 -1 O LEU B 237 N VAL B 229 SHEET 1 AA8 5 VAL B 120 LYS B 122 0 SHEET 2 AA8 5 LYS B 189 LEU B 195 1 O ARG B 193 N ALA B 121 SHEET 3 AA8 5 PRO B 133 GLY B 142 -1 N ILE B 136 O PHE B 192 SHEET 4 AA8 5 TYR B 281 GLU B 285 1 O ILE B 284 N VAL B 135 SHEET 5 AA8 5 VAL B 265 LYS B 268 -1 N LYS B 268 O TYR B 281 SHEET 1 AA9 4 VAL B 120 LYS B 122 0 SHEET 2 AA9 4 LYS B 189 LEU B 195 1 O ARG B 193 N ALA B 121 SHEET 3 AA9 4 PRO B 133 GLY B 142 -1 N ILE B 136 O PHE B 192 SHEET 4 AA9 4 ILE B 288 LEU B 290 1 O LEU B 290 N THR B 141 SHEET 1 AB1 2 TYR B 200 GLY B 201 0 SHEET 2 AB1 2 ASN B 220 ARG B 221 -1 O ARG B 221 N TYR B 200 LINK OD1 ASP A 98 CA CA A 405 1555 1555 2.22 LINK O LEU A 125 CA CA A 403 1555 1555 2.43 LINK OH TYR A 164 FE FE A 402 1555 1555 1.96 LINK OH TYR A 200 FE FE A 402 1555 1555 2.12 LINK NE2 HIS A 224 FE FE A 402 1555 1555 2.14 LINK NE2 HIS A 226 FE FE A 402 1555 1555 2.11 LINK OD2 ASP A 267 CA CA A 405 1555 4455 2.58 LINK FE FE A 402 O HOH A 545 1555 1555 2.08 LINK CA CA A 403 O HOH A 528 1555 1555 2.49 LINK CA CA A 403 O HOH A 672 1555 1555 2.60 LINK CA CA A 403 O HOH A 753 1555 1555 2.33 LINK CA CA A 403 O HOH A 860 1555 1555 2.38 LINK CA CA A 403 O HOH A 953 1555 1555 2.54 LINK CA CA A 404 O HOH A 654 1555 1555 2.37 LINK CA CA A 404 O HOH A 743 1555 1555 2.37 LINK CA CA A 404 O HOH A 745 1555 1555 2.34 LINK CA CA A 404 O HOH A 897 1555 1555 2.38 LINK CA CA A 404 O HOH B 814 1555 1565 2.32 LINK CA CA A 404 O HOH B 891 1555 1565 2.47 LINK CA CA A 404 O HOH B 940 1555 1565 2.44 LINK CA CA A 405 O HOH A 617 1555 1555 2.29 LINK CA CA A 405 O HOH A 673 1555 1555 2.39 LINK CA CA A 405 O HOH A 811 1555 1555 3.03 LINK CA CA A 406 O GLY B 245 2556 1555 2.42 LINK O HOH A 663 CA CA B 404 1555 1555 2.39 LINK O HOH A 676 CA CA B 404 1555 1555 2.52 LINK OD1 ASP B 127 CA CA B 403 1555 1555 2.22 LINK OH TYR B 164 FE FE B 402 1555 1555 1.93 LINK OH TYR B 200 FE FE B 402 1555 1555 2.14 LINK NE2 HIS B 224 FE FE B 402 1555 1555 2.14 LINK NE2 HIS B 226 FE FE B 402 1555 1555 2.12 LINK FE FE B 402 O HOH B 524 1555 1555 2.13 LINK CA CA B 403 O HOH B 506 1555 4556 2.88 LINK CA CA B 403 O HOH B 522 1555 4556 2.43 LINK CA CA B 403 O HOH B 581 1555 4556 2.36 LINK CA CA B 403 O HOH B 640 1555 1555 2.28 LINK CA CA B 403 O HOH B 685 1555 1555 2.39 LINK CA CA B 403 O HOH B 734 1555 1555 2.32 LINK CA CA B 403 O HOH B 813 1555 1555 2.45 LINK CA CA B 404 O HOH B 679 1555 1555 2.49 LINK CA CA B 404 O HOH B 718 1555 1555 2.35 LINK CA CA B 404 O HOH B 939 1555 1555 2.25 LINK CA CA B 405 O HOH B 513 1555 4556 2.24 LINK CA CA B 405 O HOH B 592 1555 4556 2.38 LINK CA CA B 405 O HOH B 661 1555 4556 2.53 LINK CA CA B 405 O HOH B 788 1555 4556 2.56 LINK CA CA B 405 O HOH B 836 1555 4556 2.43 LINK CA CA B 405 O HOH B 931 1555 1555 2.32 LINK CA CA B 405 O HOH B 943 1555 4556 2.23 CRYST1 115.467 52.327 120.396 90.00 92.50 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008660 0.000000 0.000379 0.00000 SCALE2 0.000000 0.019111 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008314 0.00000