HEADER BIOSYNTHETIC PROTEIN 30-SEP-24 9DSW TITLE THERMOTOGA MARITIMA THREONYLCARBAMOYL ADENYLATE SYNTHASE (TSAC2) IN TITLE 2 COMPLEX WITH L-THREONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THREONYLCARBAMOYL-AMP SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TC-AMP SYNTHASE,L-THREONYLCARBAMOYLADENYLATE SYNTHASE; COMPND 5 EC: 2.7.7.87; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM_0852; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TSAC2, TSAC, T6A, N6-THREONYLCARBAMOYL ADENOSINE, T6A37, TRNA, KEYWDS 2 TRANSFER-RNA, REACTION INTERMEDIATE, TC-AMP, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KUTSHUASHVILI,M.A.SWAIRJO REVDAT 1 29-OCT-25 9DSW 0 JRNL AUTH A.KUTCHAUSHVILI,E.WOOD,A.LUTHRA,S.-H.HUNG,W.SWINEHART, JRNL AUTH 2 B.SANKARAN,E.SCHELEEN,D.IWATA-REUYL,M.A.SWAIRJO JRNL TITL CRYSTALLOGRAPHIC EVIDENCE OF N-CARBOXY-L-THREONINE JRNL TITL 2 INTERMEDIATE IN T6A MODIFICATION OF TRNA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 64297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3283 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2290 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 44.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5144 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 227 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.09000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.011 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5320 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5349 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7192 ; 1.389 ; 1.862 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12390 ; 0.464 ; 1.765 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 644 ; 6.776 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 34 ; 9.391 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 974 ;14.893 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 827 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5937 ; 0.000 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1063 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2592 ; 2.486 ; 3.004 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2588 ; 2.481 ; 3.002 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3225 ; 3.998 ; 5.388 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3226 ; 3.997 ; 5.387 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2728 ; 3.357 ; 3.529 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2729 ; 3.356 ; 3.529 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3967 ; 5.547 ; 6.239 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5742 ; 7.606 ;29.890 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5743 ; 7.605 ;29.890 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9DSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000288748. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.19499 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73986 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 44.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 35.30 REMARK 200 R MERGE (I) : 0.24400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG8000, 20% GLYCEROL, 150 MM REMARK 280 CALCIUM ACETATE, 80 MM SODIUM CACODYLATE, PH 6.5, 25 MG/ML REMARK 280 TMTSAC2, 50 MM TRIS, PH 7.5, 50 MM KCL, 1 MM DTT, 10 MM L- REMARK 280 THREONINE, 1 MM MGCL2, PH 7.4, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.91100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.82200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.82200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.91100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 ASN A 222 REMARK 465 PHE A 223 REMARK 465 LYS A 224 REMARK 465 GLY A 225 REMARK 465 ARG A 226 REMARK 465 PRO A 227 REMARK 465 LEU A 228 REMARK 465 ALA A 229 REMARK 465 PRO A 230 REMARK 465 GLY A 231 REMARK 465 MET A 232 REMARK 465 LYS A 233 REMARK 465 TYR A 234 REMARK 465 ARG A 235 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 PHE B 223 REMARK 465 LYS B 224 REMARK 465 GLY B 225 REMARK 465 ARG B 226 REMARK 465 PRO B 227 REMARK 465 LEU B 228 REMARK 465 ALA B 229 REMARK 465 PRO B 230 REMARK 465 GLY B 231 REMARK 465 MET B 232 REMARK 465 LYS B 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 25 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 25 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 36 -74.29 -99.90 REMARK 500 GLU A 58 58.27 72.77 REMARK 500 PRO A 242 132.60 -33.17 REMARK 500 ASP A 275 -76.54 -78.36 REMARK 500 SER B 1 72.61 45.27 REMARK 500 THR B 36 -78.66 -94.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 316 0.10 SIDE CHAIN REMARK 500 ARG B 25 0.09 SIDE CHAIN REMARK 500 ARG B 316 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9DG5 RELATED DB: PDB REMARK 900 RELATED ID: 9DSV RELATED DB: PDB REMARK 900 RELATED ID: 9DSQ RELATED DB: PDB REMARK 900 RELATED ID: 9D3H RELATED DB: PDB DBREF 9DSW A 2 335 UNP Q9WZV6 Q9WZV6_THEMA 2 335 DBREF 9DSW B 2 335 UNP Q9WZV6 Q9WZV6_THEMA 2 335 SEQADV 9DSW GLY A -4 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW SER A -3 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW HIS A -2 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW MET A -1 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW ALA A 0 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW SER A 1 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW GLY B -4 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW SER B -3 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW HIS B -2 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW MET B -1 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW ALA B 0 UNP Q9WZV6 EXPRESSION TAG SEQADV 9DSW SER B 1 UNP Q9WZV6 EXPRESSION TAG SEQRES 1 A 340 GLY SER HIS MET ALA SER THR ARG VAL LEU LYS VAL ASP SEQRES 2 A 340 PRO LEU PHE PRO ASP GLU LYS VAL LEU LYS GLU ALA ALA SEQRES 3 A 340 GLU LEU LEU ARG ASN GLY GLU VAL ILE ILE PHE PRO THR SEQRES 4 A 340 GLU THR VAL TYR GLY ILE GLY ALA ASP ALA TYR ASN GLU SEQRES 5 A 340 GLU ALA CYS LYS LYS ILE PHE LYS LEU LYS GLU ARG PRO SEQRES 6 A 340 ALA ASP ASN PRO LEU ILE VAL HIS ILE HIS SER PHE LYS SEQRES 7 A 340 GLN LEU GLU GLU ILE ALA GLU GLY TYR GLU PRO HIS LEU SEQRES 8 A 340 ASP PHE LEU LYS LYS PHE TRP PRO GLY PRO LEU THR VAL SEQRES 9 A 340 ILE PHE ARG LYS LYS SER GLU LYS ILE PRO PRO VAL VAL SEQRES 10 A 340 THR ALA ASP LEU PRO THR VAL ALA VAL ARG MET PRO ALA SEQRES 11 A 340 HIS PRO VAL ALA LEU LYS LEU ILE GLU LEU PHE GLY HIS SEQRES 12 A 340 PRO ILE ALA ALA PRO SER ALA ASN ILE SER GLY ARG PRO SEQRES 13 A 340 SER ALA THR ASN VAL LYS HIS VAL ILE GLU ASP PHE MET SEQRES 14 A 340 GLY LYS VAL LYS LEU ILE ILE ASP ALA GLY ASP THR PRO SEQRES 15 A 340 PHE GLY LEU GLU SER THR ILE VAL ASP LEU THR LYS GLU SEQRES 16 A 340 LYS PRO VAL LEU LEU ARG PRO GLY PRO VAL GLU VAL GLU SEQRES 17 A 340 ARG LEU LYS GLU LEU PHE PRO GLU LEU VAL VAL PRO ASP SEQRES 18 A 340 PHE VAL ARG LYS GLY ASN PHE LYS GLY ARG PRO LEU ALA SEQRES 19 A 340 PRO GLY MET LYS TYR ARG HIS TYR ALA PRO LEU LYS PRO SEQRES 20 A 340 LEU ILE LEU VAL GLU ASP LEU THR LYS MET GLU GLU VAL SEQRES 21 A 340 LEU LYS LYS TYR PRO ASP HIS VAL VAL ILE CYS VAL GLU SEQRES 22 A 340 GLU ARG LYS GLU LEU TYR ASP ASP ARG ILE VAL VAL GLY SEQRES 23 A 340 SER LEU LYS ASN PRO TYR SER ILE ALA GLN ASN ILE PHE SEQRES 24 A 340 SER ALA LEU ARG GLU ALA GLU LYS MET GLY LYS GLU TYR SEQRES 25 A 340 ILE ILE VAL GLU GLY PHE GLU GLU ARG GLY ILE LEU PHE SEQRES 26 A 340 ALA VAL MET ASN ARG LEU ARG LYS ALA ALA THR GLU ILE SEQRES 27 A 340 VAL ARG SEQRES 1 B 340 GLY SER HIS MET ALA SER THR ARG VAL LEU LYS VAL ASP SEQRES 2 B 340 PRO LEU PHE PRO ASP GLU LYS VAL LEU LYS GLU ALA ALA SEQRES 3 B 340 GLU LEU LEU ARG ASN GLY GLU VAL ILE ILE PHE PRO THR SEQRES 4 B 340 GLU THR VAL TYR GLY ILE GLY ALA ASP ALA TYR ASN GLU SEQRES 5 B 340 GLU ALA CYS LYS LYS ILE PHE LYS LEU LYS GLU ARG PRO SEQRES 6 B 340 ALA ASP ASN PRO LEU ILE VAL HIS ILE HIS SER PHE LYS SEQRES 7 B 340 GLN LEU GLU GLU ILE ALA GLU GLY TYR GLU PRO HIS LEU SEQRES 8 B 340 ASP PHE LEU LYS LYS PHE TRP PRO GLY PRO LEU THR VAL SEQRES 9 B 340 ILE PHE ARG LYS LYS SER GLU LYS ILE PRO PRO VAL VAL SEQRES 10 B 340 THR ALA ASP LEU PRO THR VAL ALA VAL ARG MET PRO ALA SEQRES 11 B 340 HIS PRO VAL ALA LEU LYS LEU ILE GLU LEU PHE GLY HIS SEQRES 12 B 340 PRO ILE ALA ALA PRO SER ALA ASN ILE SER GLY ARG PRO SEQRES 13 B 340 SER ALA THR ASN VAL LYS HIS VAL ILE GLU ASP PHE MET SEQRES 14 B 340 GLY LYS VAL LYS LEU ILE ILE ASP ALA GLY ASP THR PRO SEQRES 15 B 340 PHE GLY LEU GLU SER THR ILE VAL ASP LEU THR LYS GLU SEQRES 16 B 340 LYS PRO VAL LEU LEU ARG PRO GLY PRO VAL GLU VAL GLU SEQRES 17 B 340 ARG LEU LYS GLU LEU PHE PRO GLU LEU VAL VAL PRO ASP SEQRES 18 B 340 PHE VAL ARG LYS GLY ASN PHE LYS GLY ARG PRO LEU ALA SEQRES 19 B 340 PRO GLY MET LYS TYR ARG HIS TYR ALA PRO LEU LYS PRO SEQRES 20 B 340 LEU ILE LEU VAL GLU ASP LEU THR LYS MET GLU GLU VAL SEQRES 21 B 340 LEU LYS LYS TYR PRO ASP HIS VAL VAL ILE CYS VAL GLU SEQRES 22 B 340 GLU ARG LYS GLU LEU TYR ASP ASP ARG ILE VAL VAL GLY SEQRES 23 B 340 SER LEU LYS ASN PRO TYR SER ILE ALA GLN ASN ILE PHE SEQRES 24 B 340 SER ALA LEU ARG GLU ALA GLU LYS MET GLY LYS GLU TYR SEQRES 25 B 340 ILE ILE VAL GLU GLY PHE GLU GLU ARG GLY ILE LEU PHE SEQRES 26 B 340 ALA VAL MET ASN ARG LEU ARG LYS ALA ALA THR GLU ILE SEQRES 27 B 340 VAL ARG HET THR A 401 8 HET ACT A 402 4 HET ACT A 403 4 HET THR B 401 8 HET ACT B 402 4 HET PEG B 403 7 HET GOL B 404 6 HET GOL B 405 6 HET GOL B 406 6 HET GOL B 407 6 HET ACT B 408 4 HETNAM THR THREONINE HETNAM ACT ACETATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 THR 2(C4 H9 N O3) FORMUL 4 ACT 4(C2 H3 O2 1-) FORMUL 8 PEG C4 H10 O3 FORMUL 9 GOL 4(C3 H8 O3) FORMUL 14 HOH *227(H2 O) HELIX 1 AA1 ASP A 13 ASN A 26 1 14 HELIX 2 AA2 ASN A 46 GLU A 58 1 13 HELIX 3 AA3 SER A 71 ILE A 78 1 8 HELIX 4 AA4 TYR A 82 PRO A 84 5 3 HELIX 5 AA5 HIS A 85 TRP A 93 1 9 HELIX 6 AA6 PRO A 109 ALA A 114 1 6 HELIX 7 AA7 HIS A 126 GLY A 137 1 12 HELIX 8 AA8 ASN A 155 MET A 164 1 10 HELIX 9 AA9 GLU A 201 PHE A 209 1 9 HELIX 10 AB1 PRO A 215 LYS A 220 1 6 HELIX 11 AB2 LYS A 251 TYR A 259 1 9 HELIX 12 AB3 GLU A 269 TYR A 274 5 6 HELIX 13 AB4 ASN A 285 MET A 303 1 19 HELIX 14 AB5 ARG A 316 ALA A 330 1 15 HELIX 15 AB6 ASP B 13 ASN B 26 1 14 HELIX 16 AB7 ASN B 46 GLU B 58 1 13 HELIX 17 AB8 SER B 71 ILE B 78 1 8 HELIX 18 AB9 TYR B 82 PRO B 84 5 3 HELIX 19 AC1 HIS B 85 TRP B 93 1 9 HELIX 20 AC2 PRO B 109 ALA B 114 1 6 HELIX 21 AC3 HIS B 126 GLY B 137 1 12 HELIX 22 AC4 ASN B 155 MET B 164 1 10 HELIX 23 AC5 GLU B 201 PHE B 209 1 9 HELIX 24 AC6 PRO B 215 LYS B 220 1 6 HELIX 25 AC7 ASP B 248 THR B 250 5 3 HELIX 26 AC8 LYS B 251 TYR B 259 1 9 HELIX 27 AC9 GLU B 269 TYR B 274 5 6 HELIX 28 AD1 ASN B 285 GLU B 301 1 17 HELIX 29 AD2 GLY B 317 ALA B 330 1 14 SHEET 1 AA1 2 ARG A 3 LYS A 6 0 SHEET 2 AA1 2 LEU A 169 ASP A 172 1 O ASP A 172 N LEU A 5 SHEET 1 AA2 7 ILE A 30 PHE A 32 0 SHEET 2 AA2 7 GLY A 39 ASP A 43 -1 O GLY A 39 N PHE A 32 SHEET 3 AA2 7 ILE A 140 ALA A 141 -1 O ALA A 141 N ALA A 42 SHEET 4 AA2 7 ILE A 66 HIS A 68 -1 N HIS A 68 O ILE A 140 SHEET 5 AA2 7 THR A 118 ARG A 122 1 O ALA A 120 N VAL A 67 SHEET 6 AA2 7 LEU A 97 LYS A 103 -1 N PHE A 101 O VAL A 119 SHEET 7 AA2 7 ALA A 79 GLU A 80 -1 N GLU A 80 O ARG A 102 SHEET 1 AA3 8 ILE A 30 PHE A 32 0 SHEET 2 AA3 8 GLY A 39 ASP A 43 -1 O GLY A 39 N PHE A 32 SHEET 3 AA3 8 ILE A 140 ALA A 141 -1 O ALA A 141 N ALA A 42 SHEET 4 AA3 8 ILE A 66 HIS A 68 -1 N HIS A 68 O ILE A 140 SHEET 5 AA3 8 THR A 118 ARG A 122 1 O ALA A 120 N VAL A 67 SHEET 6 AA3 8 LEU A 97 LYS A 103 -1 N PHE A 101 O VAL A 119 SHEET 7 AA3 8 THR A 183 ASP A 186 1 O THR A 183 N THR A 98 SHEET 8 AA3 8 VAL A 193 ARG A 196 -1 O VAL A 193 N ASP A 186 SHEET 1 AA4 5 ARG A 277 GLY A 281 0 SHEET 2 AA4 5 HIS A 262 VAL A 267 1 N VAL A 264 O ILE A 278 SHEET 3 AA4 5 TYR A 307 GLU A 311 1 O ILE A 309 N VAL A 263 SHEET 4 AA4 5 LEU A 243 VAL A 246 1 N ILE A 244 O ILE A 308 SHEET 5 AA4 5 GLU A 332 VAL A 334 1 O GLU A 332 N LEU A 245 SHEET 1 AA5 9 ARG B 3 LYS B 6 0 SHEET 2 AA5 9 LEU B 169 ASP B 172 1 O ILE B 170 N ARG B 3 SHEET 3 AA5 9 ILE B 30 PHE B 32 1 N ILE B 31 O ILE B 171 SHEET 4 AA5 9 GLY B 39 ASP B 43 -1 O GLY B 41 N ILE B 30 SHEET 5 AA5 9 ILE B 140 ALA B 141 -1 O ALA B 141 N ALA B 42 SHEET 6 AA5 9 ILE B 66 HIS B 68 -1 N HIS B 68 O ILE B 140 SHEET 7 AA5 9 THR B 118 ARG B 122 1 O ALA B 120 N VAL B 67 SHEET 8 AA5 9 LEU B 97 LYS B 103 -1 N PHE B 101 O VAL B 119 SHEET 9 AA5 9 ALA B 79 GLU B 80 -1 N GLU B 80 O ARG B 102 SHEET 1 AA610 ARG B 3 LYS B 6 0 SHEET 2 AA610 LEU B 169 ASP B 172 1 O ILE B 170 N ARG B 3 SHEET 3 AA610 ILE B 30 PHE B 32 1 N ILE B 31 O ILE B 171 SHEET 4 AA610 GLY B 39 ASP B 43 -1 O GLY B 41 N ILE B 30 SHEET 5 AA610 ILE B 140 ALA B 141 -1 O ALA B 141 N ALA B 42 SHEET 6 AA610 ILE B 66 HIS B 68 -1 N HIS B 68 O ILE B 140 SHEET 7 AA610 THR B 118 ARG B 122 1 O ALA B 120 N VAL B 67 SHEET 8 AA610 LEU B 97 LYS B 103 -1 N PHE B 101 O VAL B 119 SHEET 9 AA610 THR B 183 ASP B 186 1 O THR B 183 N THR B 98 SHEET 10 AA610 VAL B 193 ARG B 196 -1 O VAL B 193 N ASP B 186 SHEET 1 AA7 5 ARG B 277 GLY B 281 0 SHEET 2 AA7 5 HIS B 262 VAL B 267 1 N VAL B 264 O ILE B 278 SHEET 3 AA7 5 TYR B 307 GLU B 311 1 O ILE B 309 N ILE B 265 SHEET 4 AA7 5 LEU B 243 VAL B 246 1 N ILE B 244 O ILE B 308 SHEET 5 AA7 5 GLU B 332 VAL B 334 1 O VAL B 334 N LEU B 245 CISPEP 1 TRP A 93 PRO A 94 0 -7.02 CISPEP 2 TRP B 93 PRO B 94 0 -7.42 CRYST1 153.672 153.672 86.733 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006507 0.003757 0.000000 0.00000 SCALE2 0.000000 0.007514 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011530 0.00000 CONECT 5163 5164 5165 5166 CONECT 5164 5163 CONECT 5165 5163 CONECT 5166 5163 CONECT 5167 5168 5169 5170 CONECT 5168 5167 CONECT 5169 5167 CONECT 5170 5167 CONECT 5179 5180 5181 5182 CONECT 5180 5179 CONECT 5181 5179 CONECT 5182 5179 CONECT 5183 5184 5185 CONECT 5184 5183 CONECT 5185 5183 5186 CONECT 5186 5185 5187 CONECT 5187 5186 5188 CONECT 5188 5187 5189 CONECT 5189 5188 CONECT 5190 5191 5192 CONECT 5191 5190 CONECT 5192 5190 5193 5194 CONECT 5193 5192 CONECT 5194 5192 5195 CONECT 5195 5194 CONECT 5196 5197 5198 CONECT 5197 5196 CONECT 5198 5196 5199 5200 CONECT 5199 5198 CONECT 5200 5198 5201 CONECT 5201 5200 CONECT 5202 5203 5204 CONECT 5203 5202 CONECT 5204 5202 5205 5206 CONECT 5205 5204 CONECT 5206 5204 5207 CONECT 5207 5206 CONECT 5208 5209 5210 CONECT 5209 5208 CONECT 5210 5208 5211 5212 CONECT 5211 5210 CONECT 5212 5210 5213 CONECT 5213 5212 CONECT 5214 5215 5216 5217 CONECT 5215 5214 CONECT 5216 5214 CONECT 5217 5214 MASTER 364 0 11 29 46 0 0 6 5434 2 47 54 END