HEADER TRANSPORT PROTEIN 30-SEP-24 9DSY TITLE CRYSTAL STRUCTURE OF C4-DICARBOXYLATE-BINDING PERIPLASMIC PROTEIN TITLE 2 (PA5167) OF TRIPARTITE ATP-INDEPENDENT PERIPLASMIC TRANSPORTER FAMILY TITLE 3 FROM PSEUDOMONAS AERUGINOSA PAO1 IN COMPLEX WITH SUCCINIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: C4-DICARBOXYLATE-BINDING PERIPLASMIC PROTEIN DCTP; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: DCTP, PA5167; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, DCTP, SUCCINIC ACID, CENTER FOR STRUCTURAL BIOLOGY KEYWDS 3 OF INFECTIOUS DISEASES, CSBID, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,S.SHUKLA,L.SHUVALOVA,K.J.F.SATCHELL,CENTER FOR STRUCTURAL AUTHOR 2 BIOLOGY OF INFECTIOUS DISEASES (CSBID) REVDAT 1 09-OCT-24 9DSY 0 JRNL AUTH G.MINASOV,S.SHUKLA,L.SHUVALOVA,K.J.F.SATCHELL, JRNL AUTH 2 CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES (CSBID) JRNL TITL CRYSTAL STRUCTURE OF C4-DICARBOXYLATE-BINDING PERIPLASMIC JRNL TITL 2 PROTEIN (PA5167) OF TRIPARTITE ATP-INDEPENDENT PERIPLASMIC JRNL TITL 3 TRANSPORTER FAMILY FROM PSEUDOMONAS AERUGINOSA PAO1 IN JRNL TITL 4 COMPLEX WITH SUCCINIC ACID JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 52942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2775 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3765 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2411 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : -0.73000 REMARK 3 B33 (A**2) : 0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.12000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.409 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2687 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2606 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3643 ; 1.461 ; 1.839 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6036 ; 0.497 ; 1.777 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 343 ; 4.310 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 12 ; 2.436 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 475 ; 8.356 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3226 ; 0.019 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 604 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1327 ; 1.022 ; 1.063 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1327 ; 1.021 ; 1.062 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1685 ; 1.580 ; 1.906 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1686 ; 1.579 ; 1.907 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 2.224 ; 1.353 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1359 ; 2.224 ; 1.354 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1959 ; 3.484 ; 2.358 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3099 ; 5.595 ;15.400 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3021 ; 5.520 ;13.020 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): -6.1300 -28.3827 -9.5474 REMARK 3 T TENSOR REMARK 3 T11: 0.0225 T22: 0.0034 REMARK 3 T33: 0.0418 T12: 0.0023 REMARK 3 T13: 0.0049 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.6462 L22: 2.3024 REMARK 3 L33: 0.6945 L12: 0.2327 REMARK 3 L13: -0.3083 L23: -0.5943 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: -0.0718 S13: -0.1151 REMARK 3 S21: 0.0884 S22: -0.0016 S23: -0.1668 REMARK 3 S31: 0.0206 S32: 0.0191 S33: 0.0609 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 106 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): -15.4416 -29.8115 -30.0904 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.3287 REMARK 3 T33: 0.0594 T12: -0.1392 REMARK 3 T13: -0.0010 T23: -0.0831 REMARK 3 L TENSOR REMARK 3 L11: 0.1535 L22: 8.5495 REMARK 3 L33: 4.0809 L12: -0.6211 REMARK 3 L13: 0.0448 L23: -2.6251 REMARK 3 S TENSOR REMARK 3 S11: -0.0664 S12: 0.1621 S13: -0.0765 REMARK 3 S21: -0.4242 S22: 0.2518 S23: 0.3015 REMARK 3 S31: 0.2566 S32: -0.5033 S33: -0.1853 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 162 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8414 -22.4620 -24.6788 REMARK 3 T TENSOR REMARK 3 T11: 0.1353 T22: 0.0761 REMARK 3 T33: 0.0508 T12: -0.0385 REMARK 3 T13: 0.0310 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.7517 L22: 3.2867 REMARK 3 L33: 0.9854 L12: -1.2825 REMARK 3 L13: 0.2838 L23: -1.1576 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.3176 S13: 0.0474 REMARK 3 S21: -0.5631 S22: -0.0557 S23: -0.1805 REMARK 3 S31: 0.2080 S32: -0.0664 S33: 0.0492 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 163 A 197 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5527 -9.6796 -26.1241 REMARK 3 T TENSOR REMARK 3 T11: 0.0662 T22: 0.0804 REMARK 3 T33: 0.0901 T12: -0.0115 REMARK 3 T13: 0.0251 T23: 0.0724 REMARK 3 L TENSOR REMARK 3 L11: 1.5236 L22: 1.7959 REMARK 3 L33: 2.8722 L12: -0.4263 REMARK 3 L13: -0.4413 L23: -0.4268 REMARK 3 S TENSOR REMARK 3 S11: 0.0563 S12: 0.3026 S13: 0.3267 REMARK 3 S21: -0.2160 S22: -0.1237 S23: -0.2231 REMARK 3 S31: -0.0902 S32: 0.0543 S33: 0.0674 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 198 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9686 -23.5004 -15.2785 REMARK 3 T TENSOR REMARK 3 T11: 0.0173 T22: 0.0052 REMARK 3 T33: 0.0346 T12: -0.0079 REMARK 3 T13: 0.0034 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 1.1109 L22: 1.8745 REMARK 3 L33: 0.3279 L12: -0.1969 REMARK 3 L13: 0.0934 L23: -0.3433 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: 0.0500 S13: -0.0201 REMARK 3 S21: -0.0923 S22: 0.0394 S23: 0.0395 REMARK 3 S31: 0.0241 S32: 0.0041 S33: 0.0008 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 281 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9946 -13.1725 -31.0825 REMARK 3 T TENSOR REMARK 3 T11: 0.1346 T22: 0.1985 REMARK 3 T33: 0.1034 T12: -0.0020 REMARK 3 T13: -0.0953 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 3.7081 L22: 2.1545 REMARK 3 L33: 1.9485 L12: -0.8833 REMARK 3 L13: -1.7538 L23: 0.5846 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: 0.8360 S13: 0.1186 REMARK 3 S21: -0.4921 S22: -0.1855 S23: 0.3504 REMARK 3 S31: -0.0612 S32: -0.3154 S33: 0.1440 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 313 A 328 REMARK 3 ORIGIN FOR THE GROUP (A): -8.1305 -30.3590 -37.5487 REMARK 3 T TENSOR REMARK 3 T11: 0.3750 T22: 0.3267 REMARK 3 T33: 0.0542 T12: 0.0451 REMARK 3 T13: -0.0113 T23: -0.0818 REMARK 3 L TENSOR REMARK 3 L11: 13.2273 L22: 3.7704 REMARK 3 L33: 2.2670 L12: 5.5852 REMARK 3 L13: -1.4673 L23: -1.5833 REMARK 3 S TENSOR REMARK 3 S11: 0.3789 S12: 0.4214 S13: -0.3681 REMARK 3 S21: -0.4495 S22: -0.2232 S23: -0.0614 REMARK 3 S31: 0.4775 S32: -0.0149 S33: -0.1556 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9DSY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000288753. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55717 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : 0.10300 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.0 MG/ML, 0.5M SODIUM REMARK 280 CHLORIDE, 0.02M TRIS-HCL (PH 8.0), 2MM SUCCINIC ACID; SCREEN: REMARK 280 CLASSICS II (H9), 0.05M ZING ACETATE, 20% (W/V) PEG 3350; CRYO: REMARK 280 RESERVOIR., PH 8.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 ASP A 25 REMARK 465 GLN A 329 REMARK 465 ALA A 330 REMARK 465 GLN A 331 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 146 -80.29 -115.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 GLU A 78 OE1 45.9 REMARK 620 3 GLU A 78 OE1 46.4 0.7 REMARK 620 4 GLU A 78 OE2 43.7 2.4 2.8 REMARK 620 5 ARG A 281 NH1 124.6 115.3 114.7 115.2 REMARK 620 6 ARG A 281 NH2 121.4 91.4 90.8 92.2 30.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 HIS A 145 NE2 138.2 REMARK 620 3 HOH A 696 O 103.3 102.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 177 OE2 REMARK 620 2 GLU A 292 OE2 47.9 REMARK 620 3 HOH A 627 O 92.8 71.1 REMARK 620 4 HOH A 657 O 104.5 82.8 124.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 406 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 266 OE1 REMARK 620 2 HOH A 616 O 90.6 REMARK 620 3 HOH A 718 O 123.2 144.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 692 O REMARK 620 2 HOH A 719 O 84.4 REMARK 620 3 HOH A 725 O 174.0 100.9 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSBID-IDP98633.401 RELATED DB: TARGETTRACK DBREF 9DSY A 23 331 UNP Q9HU18 DCTP_PSEAE 23 331 SEQADV 9DSY SER A 21 UNP Q9HU18 EXPRESSION TAG SEQADV 9DSY ASN A 22 UNP Q9HU18 EXPRESSION TAG SEQRES 1 A 311 SER ASN ALA ALA ASP PRO ILE VAL ILE LYS PHE SER HIS SEQRES 2 A 311 VAL VAL ALA GLU HIS THR PRO LYS GLY GLN GLY ALA LEU SEQRES 3 A 311 LEU PHE LYS LYS LEU VAL GLU GLU ARG LEU PRO GLY LYS SEQRES 4 A 311 VAL LYS VAL GLU VAL TYR PRO ASN SER SER LEU PHE GLY SEQRES 5 A 311 ASP GLY LYS GLU MSE GLU ALA LEU LEU LEU GLY ASP VAL SEQRES 6 A 311 GLN ILE ILE ALA PRO SER LEU ALA LYS PHE GLU GLN TYR SEQRES 7 A 311 THR LYS LYS LEU GLN ILE PHE ASP LEU PRO PHE LEU PHE SEQRES 8 A 311 ASP ASN ILE GLN ALA VAL ASP ARG PHE GLN GLN SER PRO SEQRES 9 A 311 GLN GLY LYS GLU LEU LEU THR SER MSE GLN ASP LYS GLY SEQRES 10 A 311 ILE THR GLY LEU GLY TYR TRP HIS ASN GLY MSE LYS GLN SEQRES 11 A 311 LEU SER ALA ASN LYS PRO LEU ARG GLU PRO LYS ASP ALA SEQRES 12 A 311 ARG GLY LEU LYS PHE ARG VAL GLN ALA SER LYS VAL LEU SEQRES 13 A 311 GLU GLU GLN PHE LYS ALA VAL ARG ALA ASN PRO ARG LYS SEQRES 14 A 311 MSE SER PHE ALA GLU VAL TYR GLN GLY LEU GLN THR GLY SEQRES 15 A 311 VAL VAL ASN GLY THR GLU ASN PRO TRP SER ASN ILE TYR SEQRES 16 A 311 SER GLN LYS MSE HIS GLU VAL GLN LYS TYR ILE THR GLU SEQRES 17 A 311 SER ASP HIS GLY VAL LEU ASP TYR MSE VAL ILE THR ASN SEQRES 18 A 311 THR LYS PHE TRP ASN GLY LEU PRO GLU ASP VAL ARG GLY SEQRES 19 A 311 VAL LEU ALA LYS THR MSE ASP GLU VAL THR VAL GLU VAL SEQRES 20 A 311 ASN LYS GLN ALA GLU ALA LEU ASN GLN GLY ASP LYS GLN SEQRES 21 A 311 ARG ILE VAL GLU ALA LYS THR SER GLU ILE ILE GLU LEU SEQRES 22 A 311 THR PRO GLU GLN ARG ALA GLU TRP ARG LYS ALA MSE GLN SEQRES 23 A 311 PRO VAL TRP LYS LYS PHE GLU GLY GLU ILE GLY ALA ASP SEQRES 24 A 311 LEU ILE LYS ALA ALA GLU ALA ALA ASN GLN ALA GLN MODRES 9DSY MSE A 77 MET MODIFIED RESIDUE MODRES 9DSY MSE A 133 MET MODIFIED RESIDUE MODRES 9DSY MSE A 148 MET MODIFIED RESIDUE MODRES 9DSY MSE A 190 MET MODIFIED RESIDUE MODRES 9DSY MSE A 219 MET MODIFIED RESIDUE MODRES 9DSY MSE A 237 MET MODIFIED RESIDUE MODRES 9DSY MSE A 260 MET MODIFIED RESIDUE MODRES 9DSY MSE A 305 MET MODIFIED RESIDUE HET MSE A 77 16 HET MSE A 133 8 HET MSE A 148 8 HET MSE A 190 16 HET MSE A 219 16 HET MSE A 237 8 HET MSE A 260 8 HET MSE A 305 8 HET SIN A 401 8 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET ZN A 405 1 HET ZN A 406 1 HETNAM MSE SELENOMETHIONINE HETNAM SIN SUCCINIC ACID HETNAM ZN ZINC ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 SIN C4 H6 O4 FORMUL 3 ZN 5(ZN 2+) FORMUL 8 HOH *261(H2 O) HELIX 1 AA1 THR A 39 LEU A 56 1 18 HELIX 2 AA2 LYS A 75 GLY A 83 1 9 HELIX 3 AA3 SER A 91 PHE A 95 5 5 HELIX 4 AA4 LYS A 101 LEU A 107 5 7 HELIX 5 AA5 ASN A 113 SER A 123 1 11 HELIX 6 AA6 SER A 123 LEU A 129 1 7 HELIX 7 AA7 LEU A 130 SER A 132 5 3 HELIX 8 AA8 MSE A 133 LYS A 136 5 4 HELIX 9 AA9 GLU A 159 ARG A 164 5 6 HELIX 10 AB1 SER A 173 ALA A 182 1 10 HELIX 11 AB2 SER A 191 ALA A 193 5 3 HELIX 12 AB3 GLU A 194 THR A 201 1 8 HELIX 13 AB4 PRO A 210 GLN A 217 1 8 HELIX 14 AB5 LYS A 218 GLN A 223 5 6 HELIX 15 AB6 THR A 242 LEU A 248 1 7 HELIX 16 AB7 PRO A 249 LYS A 286 1 38 HELIX 17 AB8 THR A 294 GLN A 306 1 13 HELIX 18 AB9 PRO A 307 GLY A 317 1 11 HELIX 19 AC1 GLY A 317 ALA A 327 1 11 SHEET 1 AA1 2 ILE A 27 SER A 32 0 SHEET 2 AA1 2 VAL A 60 TYR A 65 1 O GLU A 63 N PHE A 31 SHEET 1 AA2 3 ILE A 87 ILE A 88 0 SHEET 2 AA2 3 VAL A 233 ASN A 241 -1 O ILE A 239 N ILE A 88 SHEET 3 AA2 3 ILE A 138 MSE A 148 -1 N LEU A 141 O VAL A 238 SHEET 1 AA3 4 THR A 207 ASN A 209 0 SHEET 2 AA3 4 GLN A 150 ALA A 153 -1 N GLN A 150 O ASN A 209 SHEET 3 AA3 4 TYR A 225 GLU A 228 -1 O TYR A 225 N ALA A 153 SHEET 4 AA3 4 GLU A 289 GLU A 292 1 O ILE A 291 N GLU A 228 SHEET 1 AA4 2 LYS A 167 VAL A 170 0 SHEET 2 AA4 2 ASN A 186 LYS A 189 1 O ARG A 188 N PHE A 168 LINK C GLU A 76 N AMSE A 77 1555 1555 1.34 LINK C GLU A 76 N BMSE A 77 1555 1555 1.34 LINK C AMSE A 77 N AGLU A 78 1555 1555 1.34 LINK C BMSE A 77 N BGLU A 78 1555 1555 1.34 LINK C SER A 132 N MSE A 133 1555 1555 1.34 LINK C MSE A 133 N GLN A 134 1555 1555 1.34 LINK C GLY A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N LYS A 149 1555 1555 1.33 LINK C LYS A 189 N AMSE A 190 1555 1555 1.33 LINK C LYS A 189 N BMSE A 190 1555 1555 1.34 LINK C AMSE A 190 N SER A 191 1555 1555 1.33 LINK C BMSE A 190 N SER A 191 1555 1555 1.35 LINK C LYS A 218 N AMSE A 219 1555 1555 1.34 LINK C LYS A 218 N BMSE A 219 1555 1555 1.34 LINK C AMSE A 219 N HIS A 220 1555 1555 1.34 LINK C BMSE A 219 N HIS A 220 1555 1555 1.34 LINK C TYR A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N VAL A 238 1555 1555 1.33 LINK C THR A 259 N MSE A 260 1555 1555 1.34 LINK C MSE A 260 N ASP A 261 1555 1555 1.34 LINK C ALA A 304 N MSE A 305 1555 1555 1.34 LINK C MSE A 305 N GLN A 306 1555 1555 1.34 LINK NE2 HIS A 38 ZN ZN A 403 1555 1555 2.24 LINK OE1AGLU A 78 ZN ZN A 403 1555 1655 1.91 LINK OE1BGLU A 78 ZN ZN A 403 1555 1655 2.30 LINK OE2AGLU A 78 ZN ZN A 403 1555 1655 2.07 LINK OD2 ASP A 118 ZN ZN A 405 1555 1555 2.40 LINK NE2 HIS A 145 ZN ZN A 405 1555 1555 2.08 LINK OE2 GLU A 177 ZN ZN A 402 1555 1555 1.98 LINK OE1 GLU A 266 ZN ZN A 406 1555 1555 1.91 LINK NH1BARG A 281 ZN ZN A 403 1555 1555 1.87 LINK NH2AARG A 281 ZN ZN A 403 1555 1555 1.80 LINK OE2 GLU A 292 ZN ZN A 402 1555 1455 2.02 LINK ZN ZN A 402 O BHOH A 627 1555 1555 1.88 LINK ZN ZN A 402 O HOH A 657 1555 1555 2.05 LINK ZN ZN A 404 O BHOH A 692 1555 1455 2.20 LINK ZN ZN A 404 O HOH A 719 1555 1555 1.88 LINK ZN ZN A 404 O HOH A 725 1555 1555 1.92 LINK ZN ZN A 405 O HOH A 696 1555 1555 1.86 LINK ZN ZN A 406 O HOH A 616 1555 1455 2.56 LINK ZN ZN A 406 O HOH A 718 1555 1555 2.06 CRYST1 34.585 44.495 47.239 78.78 84.22 75.83 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028914 -0.007301 -0.001665 0.00000 SCALE2 0.000000 0.023180 -0.004149 0.00000 SCALE3 0.000000 0.000000 0.021615 0.00000