data_9DYV # _entry.id 9DYV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DYV pdb_00009dyv 10.2210/pdb9dyv/pdb WWPDB D_1000289092 ? ? BMRB 52635 ? 10.13018/BMR52635 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-10-22 ? 2 'Structure model' 1 1 2025-10-29 ? 3 'Structure model' 1 2 2025-11-19 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9DYV _pdbx_database_status.recvd_initial_deposition_date 2024-10-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 52635 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email babis.kalodimos@StJude.org _pdbx_contact_author.name_first Charalampos _pdbx_contact_author.name_last Kalodimos _pdbx_contact_author.name_mi G. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6354-2796 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jiang, Y.' 1 0000-0003-0826-4345 'Ibrahim, Z.' 2 0000-0002-1807-2139 'Xia, Y.' 3 0000-0001-7255-5425 'Kalodimos, C.G.' 4 0000-0001-6354-2796 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 85 _citation.language ? _citation.page_first 4032 _citation.page_last ? _citation.title 'Mechanisms of assembly and function of the Hsp70-Hsp40 chaperone machinery.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2025.09.023 _citation.pdbx_database_id_PubMed 41092901 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jiang, Y.' 1 ? primary 'Ibrahim, Z.' 2 ? primary 'Xia, Y.' 3 ? primary 'Clay, M.' 4 ? primary 'Myasnikov, A.' 5 ? primary 'Immadisetty, K.' 6 ? primary 'Xia, Z.' 7 ? primary 'Tang, L.' 8 ? primary 'Rossi, P.' 9 ? primary 'Ganguly, P.' 10 ? primary 'Liu, J.' 11 ? primary 'Miller, D.' 12 ? primary 'Che, M.' 13 ? primary 'Palacios, S.M.' 14 ? primary 'Kramer, G.' 15 ? primary 'Bukau, B.' 16 ? primary 'Kalodimos, C.G.' 17 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Chaperone protein DnaJ 2' _entity.formula_weight 13432.909 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMAAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPP PPGGYDFSGFDVEDFSEFFQELFGPGLFGGFGRRSRKG ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMAAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPP PPGGYDFSGFDVEDFSEFFQELFGPGLFGGFGRRSRKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 ALA n 1 5 ALA n 1 6 LYS n 1 7 LYS n 1 8 ASP n 1 9 TYR n 1 10 TYR n 1 11 ALA n 1 12 ILE n 1 13 LEU n 1 14 GLY n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 ASN n 1 19 ALA n 1 20 THR n 1 21 GLN n 1 22 GLU n 1 23 GLU n 1 24 ILE n 1 25 LYS n 1 26 ARG n 1 27 ALA n 1 28 TYR n 1 29 LYS n 1 30 ARG n 1 31 LEU n 1 32 ALA n 1 33 ARG n 1 34 GLN n 1 35 TYR n 1 36 HIS n 1 37 PRO n 1 38 ASP n 1 39 VAL n 1 40 ASN n 1 41 LYS n 1 42 SER n 1 43 PRO n 1 44 GLU n 1 45 ALA n 1 46 GLU n 1 47 GLU n 1 48 LYS n 1 49 PHE n 1 50 LYS n 1 51 GLU n 1 52 ILE n 1 53 ASN n 1 54 GLU n 1 55 ALA n 1 56 TYR n 1 57 ALA n 1 58 VAL n 1 59 LEU n 1 60 SER n 1 61 ASP n 1 62 PRO n 1 63 GLU n 1 64 LYS n 1 65 ARG n 1 66 ARG n 1 67 ILE n 1 68 TYR n 1 69 ASP n 1 70 THR n 1 71 TYR n 1 72 GLY n 1 73 THR n 1 74 THR n 1 75 GLU n 1 76 ALA n 1 77 PRO n 1 78 PRO n 1 79 PRO n 1 80 PRO n 1 81 PRO n 1 82 PRO n 1 83 GLY n 1 84 GLY n 1 85 TYR n 1 86 ASP n 1 87 PHE n 1 88 SER n 1 89 GLY n 1 90 PHE n 1 91 ASP n 1 92 VAL n 1 93 GLU n 1 94 ASP n 1 95 PHE n 1 96 SER n 1 97 GLU n 1 98 PHE n 1 99 PHE n 1 100 GLN n 1 101 GLU n 1 102 LEU n 1 103 PHE n 1 104 GLY n 1 105 PRO n 1 106 GLY n 1 107 LEU n 1 108 PHE n 1 109 GLY n 1 110 GLY n 1 111 PHE n 1 112 GLY n 1 113 ARG n 1 114 ARG n 1 115 SER n 1 116 ARG n 1 117 LYS n 1 118 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 118 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dnaJ2, TTHA1489' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 ALA 5 3 3 ALA ALA A . n A 1 6 LYS 6 4 4 LYS LYS A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 ASP 8 6 6 ASP ASP A . n A 1 9 TYR 9 7 7 TYR TYR A . n A 1 10 TYR 10 8 8 TYR TYR A . n A 1 11 ALA 11 9 9 ALA ALA A . n A 1 12 ILE 12 10 10 ILE ILE A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 VAL 15 13 13 VAL VAL A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ARG 17 15 15 ARG ARG A . n A 1 18 ASN 18 16 16 ASN ASN A . n A 1 19 ALA 19 17 17 ALA ALA A . n A 1 20 THR 20 18 18 THR THR A . n A 1 21 GLN 21 19 19 GLN GLN A . n A 1 22 GLU 22 20 20 GLU GLU A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 ILE 24 22 22 ILE ILE A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 ARG 26 24 24 ARG ARG A . n A 1 27 ALA 27 25 25 ALA ALA A . n A 1 28 TYR 28 26 26 TYR TYR A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ARG 30 28 28 ARG ARG A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 ALA 32 30 30 ALA ALA A . n A 1 33 ARG 33 31 31 ARG ARG A . n A 1 34 GLN 34 32 32 GLN GLN A . n A 1 35 TYR 35 33 33 TYR TYR A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 PRO 37 35 35 PRO PRO A . n A 1 38 ASP 38 36 36 ASP ASP A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 ASN 40 38 38 ASN ASN A . n A 1 41 LYS 41 39 39 LYS LYS A . n A 1 42 SER 42 40 40 SER SER A . n A 1 43 PRO 43 41 41 PRO PRO A . n A 1 44 GLU 44 42 42 GLU GLU A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 GLU 46 44 44 GLU GLU A . n A 1 47 GLU 47 45 45 GLU GLU A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 PHE 49 47 47 PHE PHE A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 GLU 51 49 49 GLU GLU A . n A 1 52 ILE 52 50 50 ILE ILE A . n A 1 53 ASN 53 51 51 ASN ASN A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 ALA 55 53 53 ALA ALA A . n A 1 56 TYR 56 54 54 TYR TYR A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 VAL 58 56 56 VAL VAL A . n A 1 59 LEU 59 57 57 LEU LEU A . n A 1 60 SER 60 58 58 SER SER A . n A 1 61 ASP 61 59 59 ASP ASP A . n A 1 62 PRO 62 60 60 PRO PRO A . n A 1 63 GLU 63 61 61 GLU GLU A . n A 1 64 LYS 64 62 62 LYS LYS A . n A 1 65 ARG 65 63 63 ARG ARG A . n A 1 66 ARG 66 64 64 ARG ARG A . n A 1 67 ILE 67 65 65 ILE ILE A . n A 1 68 TYR 68 66 66 TYR TYR A . n A 1 69 ASP 69 67 67 ASP ASP A . n A 1 70 THR 70 68 68 THR THR A . n A 1 71 TYR 71 69 69 TYR TYR A . n A 1 72 GLY 72 70 70 GLY GLY A . n A 1 73 THR 73 71 71 THR THR A . n A 1 74 THR 74 72 72 THR THR A . n A 1 75 GLU 75 73 73 GLU GLU A . n A 1 76 ALA 76 74 74 ALA ALA A . n A 1 77 PRO 77 75 75 PRO PRO A . n A 1 78 PRO 78 76 76 PRO PRO A . n A 1 79 PRO 79 77 77 PRO PRO A . n A 1 80 PRO 80 78 78 PRO PRO A . n A 1 81 PRO 81 79 79 PRO PRO A . n A 1 82 PRO 82 80 80 PRO PRO A . n A 1 83 GLY 83 81 81 GLY GLY A . n A 1 84 GLY 84 82 82 GLY GLY A . n A 1 85 TYR 85 83 83 TYR TYR A . n A 1 86 ASP 86 84 84 ASP ASP A . n A 1 87 PHE 87 85 85 PHE PHE A . n A 1 88 SER 88 86 86 SER SER A . n A 1 89 GLY 89 87 87 GLY GLY A . n A 1 90 PHE 90 88 88 PHE PHE A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 GLU 93 91 91 GLU GLU A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 PHE 95 93 93 PHE PHE A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 GLU 97 95 95 GLU GLU A . n A 1 98 PHE 98 96 96 PHE PHE A . n A 1 99 PHE 99 97 97 PHE PHE A . n A 1 100 GLN 100 98 98 GLN GLN A . n A 1 101 GLU 101 99 99 GLU GLU A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 PHE 103 101 101 PHE PHE A . n A 1 104 GLY 104 102 102 GLY GLY A . n A 1 105 PRO 105 103 103 PRO PRO A . n A 1 106 GLY 106 104 104 GLY GLY A . n A 1 107 LEU 107 105 105 LEU LEU A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 GLY 109 107 107 GLY GLY A . n A 1 110 GLY 110 108 108 GLY GLY A . n A 1 111 PHE 111 109 109 PHE PHE A . n A 1 112 GLY 112 110 110 GLY GLY A . n A 1 113 ARG 113 111 111 ARG ARG A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 SER 115 113 113 SER SER A . n A 1 116 ARG 116 114 114 ARG ARG A . n A 1 117 LYS 117 115 115 LYS LYS A . n A 1 118 GLY 118 116 116 GLY GLY A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DYV _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9DYV _struct.title 'Assembly and functional mechanisms of the Hsp70-Hsp40 chaperone machinery' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DYV _struct_keywords.text 'DnaJ, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DNAJ2_THET8 _struct_ref.pdbx_db_accession Q56237 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPP GGYDFSGFDVEDFSEFFQELFGPGLFGGFGRRSRKG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9DYV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q56237 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 116 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9DYV GLY A 1 ? UNP Q56237 ? ? 'expression tag' -1 1 1 9DYV HIS A 2 ? UNP Q56237 ? ? 'expression tag' 0 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 8 ? GLY A 14 ? ASP A 6 GLY A 12 1 ? 7 HELX_P HELX_P2 AA2 THR A 20 ? HIS A 36 ? THR A 18 HIS A 34 1 ? 17 HELX_P HELX_P3 AA3 SER A 42 ? SER A 60 ? SER A 40 SER A 58 1 ? 19 HELX_P HELX_P4 AA4 ASP A 61 ? TYR A 71 ? ASP A 59 TYR A 69 1 ? 11 HELX_P HELX_P5 AA5 ASP A 91 ? PHE A 95 ? ASP A 89 PHE A 93 5 ? 5 HELX_P HELX_P6 AA6 SER A 96 ? GLU A 101 ? SER A 94 GLU A 99 1 ? 6 HELX_P HELX_P7 AA7 PHE A 103 ? GLY A 109 ? PHE A 101 GLY A 107 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 9DYV _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 3 ? ? -86.19 37.99 2 1 TYR A 69 ? ? -110.98 -161.31 3 1 PHE A 85 ? ? -153.07 2.62 4 1 ASP A 89 ? ? 60.91 62.03 5 1 LEU A 100 ? ? -90.21 -69.07 6 2 ALA A 3 ? ? -140.52 11.35 7 2 ASN A 38 ? ? -165.26 103.47 8 2 TYR A 69 ? ? -96.91 -158.37 9 2 GLU A 73 ? ? -83.44 -79.19 10 2 PHE A 85 ? ? -157.31 -24.24 11 3 LYS A 5 ? ? -119.44 79.04 12 3 ASN A 16 ? ? -101.08 47.23 13 3 ASN A 38 ? ? -168.84 107.48 14 3 PRO A 79 ? ? -38.87 123.59 15 3 LEU A 100 ? ? -91.81 -67.95 16 4 ALA A 3 ? ? -166.80 28.10 17 4 ASN A 16 ? ? -90.91 34.85 18 4 ASN A 38 ? ? -164.76 113.53 19 4 TYR A 69 ? ? -92.99 -153.60 20 4 PHE A 85 ? ? -151.19 -4.01 21 4 LEU A 100 ? ? -94.62 -66.24 22 5 ALA A 2 ? ? -98.90 -157.22 23 5 ASN A 38 ? ? -161.27 102.88 24 5 TYR A 69 ? ? -90.33 -96.12 25 5 GLU A 73 ? ? -101.81 -81.07 26 5 PRO A 78 ? ? -58.88 172.45 27 5 PHE A 85 ? ? -165.40 -27.29 28 5 LEU A 100 ? ? -100.71 -62.33 29 5 PHE A 109 ? ? -65.64 -176.61 30 6 ASN A 16 ? ? -96.12 37.01 31 6 ASN A 38 ? ? -161.70 110.52 32 6 GLU A 73 ? ? -92.05 -64.95 33 6 ASP A 89 ? ? 55.22 71.28 34 6 PHE A 109 ? ? -145.93 28.05 35 6 ARG A 111 ? ? 63.20 86.47 36 7 ASN A 38 ? ? -161.92 107.01 37 7 THR A 71 ? ? -161.73 116.33 38 7 THR A 72 ? ? -87.39 46.05 39 7 GLU A 73 ? ? -135.74 -87.08 40 7 PHE A 85 ? ? -161.29 -24.76 41 7 PHE A 88 ? ? -134.45 -33.61 42 7 ARG A 111 ? ? 65.50 85.19 43 7 ARG A 112 ? ? -139.74 -74.51 44 7 ARG A 114 ? ? -143.11 12.84 45 8 ASN A 16 ? ? -91.19 35.37 46 8 ASN A 38 ? ? -163.00 108.71 47 8 GLU A 73 ? ? -117.81 -78.51 48 8 PHE A 85 ? ? -159.56 17.10 49 8 ASP A 89 ? ? 52.25 70.19 50 8 LEU A 100 ? ? -94.90 -68.65 51 8 ARG A 112 ? ? -141.08 -34.14 52 9 ASN A 16 ? ? -93.53 30.48 53 9 GLU A 73 ? ? -117.69 -85.45 54 9 PHE A 85 ? ? -152.18 -10.67 55 9 ASP A 89 ? ? 55.07 77.03 56 9 PHE A 109 ? ? -93.33 45.65 57 9 ARG A 111 ? ? -69.28 82.52 58 9 ARG A 112 ? ? -131.42 -61.33 59 10 ALA A 3 ? ? -63.16 2.45 60 10 ASN A 38 ? ? -161.45 96.27 61 10 LYS A 39 ? ? -100.76 59.98 62 10 PRO A 76 ? ? -48.50 159.28 63 10 PHE A 85 ? ? -155.17 -14.25 64 10 PHE A 88 ? ? -130.15 -45.55 65 10 ASP A 89 ? ? 60.55 69.78 66 11 ALA A 2 ? ? -129.67 -163.06 67 11 PRO A 35 ? ? -59.64 -8.87 68 11 LYS A 39 ? ? -115.98 50.62 69 11 TYR A 69 ? ? -102.13 -133.57 70 11 GLU A 73 ? ? -77.27 -76.56 71 11 PRO A 77 ? ? -49.85 152.95 72 11 PHE A 85 ? ? -161.48 7.61 73 11 ARG A 114 ? ? 39.17 71.45 74 12 ASP A 6 ? ? -68.48 95.36 75 12 ASN A 16 ? ? -107.61 40.40 76 12 LYS A 39 ? ? -99.44 57.13 77 12 TYR A 69 ? ? -102.13 -160.13 78 12 GLU A 73 ? ? -84.78 -75.47 79 12 PRO A 78 ? ? -59.07 170.45 80 12 PHE A 85 ? ? -158.03 16.61 81 12 PHE A 88 ? ? -125.10 -51.28 82 12 ASP A 89 ? ? 58.15 73.29 83 13 ALA A 2 ? ? -135.52 -87.95 84 13 ASN A 38 ? ? -166.22 97.73 85 13 LYS A 39 ? ? -109.86 65.18 86 13 GLU A 73 ? ? -88.11 -79.37 87 13 PHE A 85 ? ? -149.35 -9.81 88 14 ASN A 16 ? ? -92.18 31.00 89 14 ASN A 38 ? ? -166.73 104.46 90 14 THR A 72 ? ? -88.75 39.52 91 14 GLU A 73 ? ? -127.69 -71.08 92 14 ARG A 111 ? ? 57.88 85.25 93 15 ALA A 3 ? ? -76.54 24.20 94 15 LYS A 5 ? ? -111.26 78.87 95 15 PRO A 14 ? ? -67.74 -178.03 96 15 GLU A 73 ? ? -70.35 -70.75 97 15 PHE A 85 ? ? -154.04 18.27 98 15 LYS A 115 ? ? -161.20 100.93 99 16 ASN A 38 ? ? -163.05 112.72 100 16 TYR A 69 ? ? -106.00 -148.86 101 16 GLU A 73 ? ? -102.28 -75.28 102 16 PHE A 85 ? ? -158.17 1.56 103 16 ASP A 89 ? ? 58.27 71.68 104 16 LEU A 105 ? ? -95.48 -65.25 105 16 ARG A 114 ? ? -103.56 -66.03 106 17 ALA A 2 ? ? -104.89 -61.72 107 17 ASN A 16 ? ? -100.27 43.08 108 17 ASN A 38 ? ? -163.51 100.83 109 17 TYR A 69 ? ? -104.63 -154.79 110 17 PHE A 85 ? ? -156.48 -6.95 111 17 LEU A 100 ? ? -97.11 -69.93 112 17 ARG A 111 ? ? 53.71 83.72 113 18 ALA A 3 ? ? 59.62 19.82 114 18 THR A 72 ? ? -89.21 41.49 115 18 GLU A 73 ? ? -106.91 -68.23 116 18 PHE A 85 ? ? -141.81 -0.64 117 18 SER A 113 ? ? -61.78 98.43 118 19 LYS A 5 ? ? -161.14 119.31 119 19 LYS A 39 ? ? -103.53 69.67 120 19 ALA A 74 ? ? -158.83 88.19 121 19 PHE A 85 ? ? -161.96 -28.11 122 19 ARG A 112 ? ? -147.32 -61.58 123 20 ALA A 3 ? ? -73.97 24.38 124 20 ASN A 16 ? ? -93.13 31.18 125 20 ASN A 38 ? ? -163.50 113.70 126 20 TYR A 69 ? ? -94.62 -151.54 127 20 GLU A 73 ? ? -100.57 -84.43 128 20 PHE A 85 ? ? -151.09 -2.98 129 20 ARG A 112 ? ? -134.95 -79.69 130 20 SER A 113 ? ? 179.45 150.36 # _pdbx_nmr_ensemble.entry_id 9DYV _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9DYV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '500 uM 13C/15N labeled DnaJ1-116, 5 % 2H-labeled D2O, 100 mM NaCl, 50 mM Phosphate Buffer System, 95 % H2O, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label DnaJ _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '500 uM 13C/15N-labeled DnaJ1-116 in PBS buffer' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DnaJ1-116 500 ? uM '13C/15N labeled' 1 D2O 5 ? % 2H-labeled 1 NaCl 100 ? mM 'natural abundance' 1 'Phosphate Buffer System' 50 ? mM 'natural abundance' 1 H2O 95 ? % 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 2 isotropic 2 1 1 '3D HNCACB' 1 isotropic 3 1 1 '3D CBCA(CO)NH' 1 isotropic 4 1 1 '3D HNCO' 1 isotropic 5 1 1 '3D HCCH-COSY' 1 isotropic 6 1 1 '3D 1H-15N NOESY' 1 isotropic 7 1 1 '3D 1H-13C NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 9DYV _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' NMRFAM-SPARKY ? 'Lee W, Westler WM, Bahrami A, Eghbalnia HR, Markley JL' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 4 'peak picking' NMRFAM-SPARKY ? 'Lee W, Westler WM, Bahrami A, Eghbalnia HR, Markley JL' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 2 Y 1 A GLY -1 ? A GLY 1 4 2 Y 1 A HIS 0 ? A HIS 2 5 3 Y 1 A GLY -1 ? A GLY 1 6 3 Y 1 A HIS 0 ? A HIS 2 7 4 Y 1 A GLY -1 ? A GLY 1 8 4 Y 1 A HIS 0 ? A HIS 2 9 5 Y 1 A GLY -1 ? A GLY 1 10 5 Y 1 A HIS 0 ? A HIS 2 11 6 Y 1 A GLY -1 ? A GLY 1 12 6 Y 1 A HIS 0 ? A HIS 2 13 7 Y 1 A GLY -1 ? A GLY 1 14 7 Y 1 A HIS 0 ? A HIS 2 15 8 Y 1 A GLY -1 ? A GLY 1 16 8 Y 1 A HIS 0 ? A HIS 2 17 9 Y 1 A GLY -1 ? A GLY 1 18 9 Y 1 A HIS 0 ? A HIS 2 19 10 Y 1 A GLY -1 ? A GLY 1 20 10 Y 1 A HIS 0 ? A HIS 2 21 11 Y 1 A GLY -1 ? A GLY 1 22 11 Y 1 A HIS 0 ? A HIS 2 23 12 Y 1 A GLY -1 ? A GLY 1 24 12 Y 1 A HIS 0 ? A HIS 2 25 13 Y 1 A GLY -1 ? A GLY 1 26 13 Y 1 A HIS 0 ? A HIS 2 27 14 Y 1 A GLY -1 ? A GLY 1 28 14 Y 1 A HIS 0 ? A HIS 2 29 15 Y 1 A GLY -1 ? A GLY 1 30 15 Y 1 A HIS 0 ? A HIS 2 31 16 Y 1 A GLY -1 ? A GLY 1 32 16 Y 1 A HIS 0 ? A HIS 2 33 17 Y 1 A GLY -1 ? A GLY 1 34 17 Y 1 A HIS 0 ? A HIS 2 35 18 Y 1 A GLY -1 ? A GLY 1 36 18 Y 1 A HIS 0 ? A HIS 2 37 19 Y 1 A GLY -1 ? A GLY 1 38 19 Y 1 A HIS 0 ? A HIS 2 39 20 Y 1 A GLY -1 ? A GLY 1 40 20 Y 1 A HIS 0 ? A HIS 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'R35 GM122462' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE NEO' ? Bruker 700 ? 2 'AVANCE NEO' ? Bruker 600 ? # _atom_sites.entry_id 9DYV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #