HEADER STRUCTURAL PROTEIN 14-OCT-24 9DYV TITLE ASSEMBLY AND FUNCTIONAL MECHANISMS OF THE HSP70-HSP40 CHAPERONE TITLE 2 MACHINERY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN DNAJ 2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: DNAJ2, TTHA1489; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNAJ, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.JIANG,Z.IBRAHIM,Y.XIA,C.G.KALODIMOS REVDAT 3 19-NOV-25 9DYV 1 JRNL REVDAT 2 29-OCT-25 9DYV 1 JRNL REVDAT 1 22-OCT-25 9DYV 0 JRNL AUTH Y.JIANG,Z.IBRAHIM,Y.XIA,M.CLAY,A.MYASNIKOV,K.IMMADISETTY, JRNL AUTH 2 Z.XIA,L.TANG,P.ROSSI,P.GANGULY,J.LIU,D.MILLER,M.CHE, JRNL AUTH 3 S.M.PALACIOS,G.KRAMER,B.BUKAU,C.G.KALODIMOS JRNL TITL MECHANISMS OF ASSEMBLY AND FUNCTION OF THE HSP70-HSP40 JRNL TITL 2 CHAPERONE MACHINERY. JRNL REF MOL.CELL V. 85 4032 2025 JRNL REFN ISSN 1097-2765 JRNL PMID 41092901 JRNL DOI 10.1016/J.MOLCEL.2025.09.023 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000289092. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 500 UM 13C/15N LABELED DNAJ1 REMARK 210 -116, 5 % 2H-LABELED D2O, 100 MM REMARK 210 NACL, 50 MM PHOSPHATE BUFFER REMARK 210 SYSTEM, 95 % H2O, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D HCCH- REMARK 210 COSY; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY, CYANA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 3 37.99 -86.19 REMARK 500 1 TYR A 69 -161.31 -110.98 REMARK 500 1 PHE A 85 2.62 -153.07 REMARK 500 1 ASP A 89 62.03 60.91 REMARK 500 1 LEU A 100 -69.07 -90.21 REMARK 500 2 ALA A 3 11.35 -140.52 REMARK 500 2 ASN A 38 103.47 -165.26 REMARK 500 2 TYR A 69 -158.37 -96.91 REMARK 500 2 GLU A 73 -79.19 -83.44 REMARK 500 2 PHE A 85 -24.24 -157.31 REMARK 500 3 LYS A 5 79.04 -119.44 REMARK 500 3 ASN A 16 47.23 -101.08 REMARK 500 3 ASN A 38 107.48 -168.84 REMARK 500 3 PRO A 79 123.59 -38.87 REMARK 500 3 LEU A 100 -67.95 -91.81 REMARK 500 4 ALA A 3 28.10 -166.80 REMARK 500 4 ASN A 16 34.85 -90.91 REMARK 500 4 ASN A 38 113.53 -164.76 REMARK 500 4 TYR A 69 -153.60 -92.99 REMARK 500 4 PHE A 85 -4.01 -151.19 REMARK 500 4 LEU A 100 -66.24 -94.62 REMARK 500 5 ALA A 2 -157.22 -98.90 REMARK 500 5 ASN A 38 102.88 -161.27 REMARK 500 5 TYR A 69 -96.12 -90.33 REMARK 500 5 GLU A 73 -81.07 -101.81 REMARK 500 5 PRO A 78 172.45 -58.88 REMARK 500 5 PHE A 85 -27.29 -165.40 REMARK 500 5 LEU A 100 -62.33 -100.71 REMARK 500 5 PHE A 109 -176.61 -65.64 REMARK 500 6 ASN A 16 37.01 -96.12 REMARK 500 6 ASN A 38 110.52 -161.70 REMARK 500 6 GLU A 73 -64.95 -92.05 REMARK 500 6 ASP A 89 71.28 55.22 REMARK 500 6 PHE A 109 28.05 -145.93 REMARK 500 6 ARG A 111 86.47 63.20 REMARK 500 7 ASN A 38 107.01 -161.92 REMARK 500 7 THR A 71 116.33 -161.73 REMARK 500 7 THR A 72 46.05 -87.39 REMARK 500 7 GLU A 73 -87.08 -135.74 REMARK 500 7 PHE A 85 -24.76 -161.29 REMARK 500 7 PHE A 88 -33.61 -134.45 REMARK 500 7 ARG A 111 85.19 65.50 REMARK 500 7 ARG A 112 -74.51 -139.74 REMARK 500 7 ARG A 114 12.84 -143.11 REMARK 500 8 ASN A 16 35.37 -91.19 REMARK 500 8 ASN A 38 108.71 -163.00 REMARK 500 8 GLU A 73 -78.51 -117.81 REMARK 500 8 PHE A 85 17.10 -159.56 REMARK 500 8 ASP A 89 70.19 52.25 REMARK 500 8 LEU A 100 -68.65 -94.90 REMARK 500 REMARK 500 THIS ENTRY HAS 130 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 52635 RELATED DB: BMRB DBREF 9DYV A 1 116 UNP Q56237 DNAJ2_THET8 1 116 SEQADV 9DYV GLY A -1 UNP Q56237 EXPRESSION TAG SEQADV 9DYV HIS A 0 UNP Q56237 EXPRESSION TAG SEQRES 1 A 118 GLY HIS MET ALA ALA LYS LYS ASP TYR TYR ALA ILE LEU SEQRES 2 A 118 GLY VAL PRO ARG ASN ALA THR GLN GLU GLU ILE LYS ARG SEQRES 3 A 118 ALA TYR LYS ARG LEU ALA ARG GLN TYR HIS PRO ASP VAL SEQRES 4 A 118 ASN LYS SER PRO GLU ALA GLU GLU LYS PHE LYS GLU ILE SEQRES 5 A 118 ASN GLU ALA TYR ALA VAL LEU SER ASP PRO GLU LYS ARG SEQRES 6 A 118 ARG ILE TYR ASP THR TYR GLY THR THR GLU ALA PRO PRO SEQRES 7 A 118 PRO PRO PRO PRO GLY GLY TYR ASP PHE SER GLY PHE ASP SEQRES 8 A 118 VAL GLU ASP PHE SER GLU PHE PHE GLN GLU LEU PHE GLY SEQRES 9 A 118 PRO GLY LEU PHE GLY GLY PHE GLY ARG ARG SER ARG LYS SEQRES 10 A 118 GLY HELIX 1 AA1 ASP A 6 GLY A 12 1 7 HELIX 2 AA2 THR A 18 HIS A 34 1 17 HELIX 3 AA3 SER A 40 SER A 58 1 19 HELIX 4 AA4 ASP A 59 TYR A 69 1 11 HELIX 5 AA5 ASP A 89 PHE A 93 5 5 HELIX 6 AA6 SER A 94 GLU A 99 1 6 HELIX 7 AA7 PHE A 101 GLY A 107 1 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 1833 GLY A 116 ENDMDL MODEL 2 TER 1833 GLY A 116 ENDMDL MODEL 3 TER 1833 GLY A 116 ENDMDL MODEL 4 TER 1833 GLY A 116 ENDMDL MODEL 5 TER 1833 GLY A 116 ENDMDL MODEL 6 TER 1833 GLY A 116 ENDMDL MODEL 7 TER 1833 GLY A 116 ENDMDL MODEL 8 TER 1833 GLY A 116 ENDMDL MODEL 9 TER 1833 GLY A 116 ENDMDL MODEL 10 TER 1833 GLY A 116 ENDMDL MODEL 11 TER 1833 GLY A 116 ENDMDL MODEL 12 TER 1833 GLY A 116 ENDMDL MODEL 13 TER 1833 GLY A 116 ENDMDL MODEL 14 TER 1833 GLY A 116 ENDMDL MODEL 15 TER 1833 GLY A 116 ENDMDL MODEL 16 TER 1833 GLY A 116 ENDMDL MODEL 17 TER 1833 GLY A 116 ENDMDL MODEL 18 TER 1833 GLY A 116 ENDMDL MODEL 19 TER 1833 GLY A 116 ENDMDL MODEL 20 TER 1833 GLY A 116 ENDMDL MASTER 151 0 0 7 0 0 0 6 938 1 0 10 END