data_9E21 # _entry.id 9E21 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9E21 pdb_00009e21 10.2210/pdb9e21/pdb WWPDB D_1000288901 ? ? EMDB EMD-47426 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-07-30 ? 2 'EM metadata' 1 0 2025-07-30 ? 3 'Additional map' 1 0 2025-07-30 1 4 FSC 1 0 2025-07-30 ? 5 'Half map' 1 0 2025-07-30 1 6 'Half map' 1 0 2025-07-30 2 7 Image 1 0 2025-07-30 ? 8 'Primary map' 1 0 2025-07-30 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9E21 _pdbx_database_status.recvd_initial_deposition_date 2024-10-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52' _pdbx_database_related.db_id EMD-47426 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email goran.bajic@mssm.edu _pdbx_contact_author.name_first Goran _pdbx_contact_author.name_last Bajic _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0480-4324 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jaiswal, D.' 1 0000-0002-9565-1302 'Bajic, G.' 2 0000-0003-0480-4324 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jaiswal, D.' 1 0000-0002-9565-1302 primary 'Bajic, G.' 2 0000-0003-0480-4324 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '52 Fab Heavy chain' 12572.168 1 ? ? ? ? 2 polymer man '52 Fab light chain' 11220.589 1 ? ? ? ? 3 polymer man 'SARS XBB.1.5 Spike' 22666.639 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VQLVQSGGDLAPPGGSLRLSCEASGIIVSSNYMTWVRQAPGKGLEWVSLIFAGGSTFYADSVKGRFTVSRDNSKNTLYLQ MSSLKPEDTAVYFCARDLREMGGLDFWGQGALVTVSS ; ;VQLVQSGGDLAPPGGSLRLSCEASGIIVSSNYMTWVRQAPGKGLEWVSLIFAGGSTFYADSVKGRFTVSRDNSKNTLYLQ MSSLKPEDTAVYFCARDLREMGGLDFWGQGALVTVSS ; H ? 2 'polypeptide(L)' no no ;IQMTQSPSSVSASIGDTVTITCRASQGIPSWVAWYQQKPGKAPKLLIYGASNLQRGVPSRFSGSGSGTDFTLTISSLQPE DLAVYYCHQSDSLPGIFGGGTKVEIK ; ;IQMTQSPSSVSASIGDTVTITCRASQGIPSWVAWYQQKPGKAPKLLIYGASNLQRGVPSRFSGSGSGTDFTLTISSLQPE DLAVYYCHQSDSLPGIFGGGTKVEIK ; L ? 3 'polypeptide(L)' no no ;VRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNE VSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRFLRKSKLKPFERDISTEIYQVGNKPCNGVAGP NCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; ;VRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNE VSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRFLRKSKLKPFERDISTEIYQVGNKPCNGVAGP NCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; S ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 LEU n 1 4 VAL n 1 5 GLN n 1 6 SER n 1 7 GLY n 1 8 GLY n 1 9 ASP n 1 10 LEU n 1 11 ALA n 1 12 PRO n 1 13 PRO n 1 14 GLY n 1 15 GLY n 1 16 SER n 1 17 LEU n 1 18 ARG n 1 19 LEU n 1 20 SER n 1 21 CYS n 1 22 GLU n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 ILE n 1 27 ILE n 1 28 VAL n 1 29 SER n 1 30 SER n 1 31 ASN n 1 32 TYR n 1 33 MET n 1 34 THR n 1 35 TRP n 1 36 VAL n 1 37 ARG n 1 38 GLN n 1 39 ALA n 1 40 PRO n 1 41 GLY n 1 42 LYS n 1 43 GLY n 1 44 LEU n 1 45 GLU n 1 46 TRP n 1 47 VAL n 1 48 SER n 1 49 LEU n 1 50 ILE n 1 51 PHE n 1 52 ALA n 1 53 GLY n 1 54 GLY n 1 55 SER n 1 56 THR n 1 57 PHE n 1 58 TYR n 1 59 ALA n 1 60 ASP n 1 61 SER n 1 62 VAL n 1 63 LYS n 1 64 GLY n 1 65 ARG n 1 66 PHE n 1 67 THR n 1 68 VAL n 1 69 SER n 1 70 ARG n 1 71 ASP n 1 72 ASN n 1 73 SER n 1 74 LYS n 1 75 ASN n 1 76 THR n 1 77 LEU n 1 78 TYR n 1 79 LEU n 1 80 GLN n 1 81 MET n 1 82 SER n 1 83 SER n 1 84 LEU n 1 85 LYS n 1 86 PRO n 1 87 GLU n 1 88 ASP n 1 89 THR n 1 90 ALA n 1 91 VAL n 1 92 TYR n 1 93 PHE n 1 94 CYS n 1 95 ALA n 1 96 ARG n 1 97 ASP n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 MET n 1 102 GLY n 1 103 GLY n 1 104 LEU n 1 105 ASP n 1 106 PHE n 1 107 TRP n 1 108 GLY n 1 109 GLN n 1 110 GLY n 1 111 ALA n 1 112 LEU n 1 113 VAL n 1 114 THR n 1 115 VAL n 1 116 SER n 1 117 SER n 2 1 ILE n 2 2 GLN n 2 3 MET n 2 4 THR n 2 5 GLN n 2 6 SER n 2 7 PRO n 2 8 SER n 2 9 SER n 2 10 VAL n 2 11 SER n 2 12 ALA n 2 13 SER n 2 14 ILE n 2 15 GLY n 2 16 ASP n 2 17 THR n 2 18 VAL n 2 19 THR n 2 20 ILE n 2 21 THR n 2 22 CYS n 2 23 ARG n 2 24 ALA n 2 25 SER n 2 26 GLN n 2 27 GLY n 2 28 ILE n 2 29 PRO n 2 30 SER n 2 31 TRP n 2 32 VAL n 2 33 ALA n 2 34 TRP n 2 35 TYR n 2 36 GLN n 2 37 GLN n 2 38 LYS n 2 39 PRO n 2 40 GLY n 2 41 LYS n 2 42 ALA n 2 43 PRO n 2 44 LYS n 2 45 LEU n 2 46 LEU n 2 47 ILE n 2 48 TYR n 2 49 GLY n 2 50 ALA n 2 51 SER n 2 52 ASN n 2 53 LEU n 2 54 GLN n 2 55 ARG n 2 56 GLY n 2 57 VAL n 2 58 PRO n 2 59 SER n 2 60 ARG n 2 61 PHE n 2 62 SER n 2 63 GLY n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 GLY n 2 68 THR n 2 69 ASP n 2 70 PHE n 2 71 THR n 2 72 LEU n 2 73 THR n 2 74 ILE n 2 75 SER n 2 76 SER n 2 77 LEU n 2 78 GLN n 2 79 PRO n 2 80 GLU n 2 81 ASP n 2 82 LEU n 2 83 ALA n 2 84 VAL n 2 85 TYR n 2 86 TYR n 2 87 CYS n 2 88 HIS n 2 89 GLN n 2 90 SER n 2 91 ASP n 2 92 SER n 2 93 LEU n 2 94 PRO n 2 95 GLY n 2 96 ILE n 2 97 PHE n 2 98 GLY n 2 99 GLY n 2 100 GLY n 2 101 THR n 2 102 LYS n 2 103 VAL n 2 104 GLU n 2 105 ILE n 2 106 LYS n 3 1 VAL n 3 2 ARG n 3 3 PHE n 3 4 PRO n 3 5 ASN n 3 6 ILE n 3 7 THR n 3 8 ASN n 3 9 LEU n 3 10 CYS n 3 11 PRO n 3 12 PHE n 3 13 HIS n 3 14 GLU n 3 15 VAL n 3 16 PHE n 3 17 ASN n 3 18 ALA n 3 19 THR n 3 20 THR n 3 21 PHE n 3 22 ALA n 3 23 SER n 3 24 VAL n 3 25 TYR n 3 26 ALA n 3 27 TRP n 3 28 ASN n 3 29 ARG n 3 30 LYS n 3 31 ARG n 3 32 ILE n 3 33 SER n 3 34 ASN n 3 35 CYS n 3 36 VAL n 3 37 ALA n 3 38 ASP n 3 39 TYR n 3 40 SER n 3 41 VAL n 3 42 ILE n 3 43 TYR n 3 44 ASN n 3 45 PHE n 3 46 ALA n 3 47 PRO n 3 48 PHE n 3 49 PHE n 3 50 ALA n 3 51 PHE n 3 52 LYS n 3 53 CYS n 3 54 TYR n 3 55 GLY n 3 56 VAL n 3 57 SER n 3 58 PRO n 3 59 THR n 3 60 LYS n 3 61 LEU n 3 62 ASN n 3 63 ASP n 3 64 LEU n 3 65 CYS n 3 66 PHE n 3 67 THR n 3 68 ASN n 3 69 VAL n 3 70 TYR n 3 71 ALA n 3 72 ASP n 3 73 SER n 3 74 PHE n 3 75 VAL n 3 76 ILE n 3 77 ARG n 3 78 GLY n 3 79 ASN n 3 80 GLU n 3 81 VAL n 3 82 SER n 3 83 GLN n 3 84 ILE n 3 85 ALA n 3 86 PRO n 3 87 GLY n 3 88 GLN n 3 89 THR n 3 90 GLY n 3 91 ASN n 3 92 ILE n 3 93 ALA n 3 94 ASP n 3 95 TYR n 3 96 ASN n 3 97 TYR n 3 98 LYS n 3 99 LEU n 3 100 PRO n 3 101 ASP n 3 102 ASP n 3 103 PHE n 3 104 THR n 3 105 GLY n 3 106 CYS n 3 107 VAL n 3 108 ILE n 3 109 ALA n 3 110 TRP n 3 111 ASN n 3 112 SER n 3 113 ASN n 3 114 LYS n 3 115 LEU n 3 116 ASP n 3 117 SER n 3 118 LYS n 3 119 PRO n 3 120 SER n 3 121 GLY n 3 122 ASN n 3 123 TYR n 3 124 ASN n 3 125 TYR n 3 126 LEU n 3 127 TYR n 3 128 ARG n 3 129 PHE n 3 130 LEU n 3 131 ARG n 3 132 LYS n 3 133 SER n 3 134 LYS n 3 135 LEU n 3 136 LYS n 3 137 PRO n 3 138 PHE n 3 139 GLU n 3 140 ARG n 3 141 ASP n 3 142 ILE n 3 143 SER n 3 144 THR n 3 145 GLU n 3 146 ILE n 3 147 TYR n 3 148 GLN n 3 149 VAL n 3 150 GLY n 3 151 ASN n 3 152 LYS n 3 153 PRO n 3 154 CYS n 3 155 ASN n 3 156 GLY n 3 157 VAL n 3 158 ALA n 3 159 GLY n 3 160 PRO n 3 161 ASN n 3 162 CYS n 3 163 TYR n 3 164 SER n 3 165 PRO n 3 166 LEU n 3 167 GLN n 3 168 SER n 3 169 TYR n 3 170 GLY n 3 171 PHE n 3 172 ARG n 3 173 PRO n 3 174 THR n 3 175 TYR n 3 176 GLY n 3 177 VAL n 3 178 GLY n 3 179 HIS n 3 180 GLN n 3 181 PRO n 3 182 TYR n 3 183 ARG n 3 184 VAL n 3 185 VAL n 3 186 VAL n 3 187 LEU n 3 188 SER n 3 189 PHE n 3 190 GLU n 3 191 LEU n 3 192 LEU n 3 193 HIS n 3 194 ALA n 3 195 PRO n 3 196 ALA n 3 197 THR n 3 198 VAL n 3 199 CYS n 3 200 GLY n 3 201 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 117 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 106 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 201 ? ? ? ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL H . n A 1 2 GLN 2 3 3 GLN GLN H . n A 1 3 LEU 3 4 4 LEU LEU H . n A 1 4 VAL 4 5 5 VAL VAL H . n A 1 5 GLN 5 6 6 GLN GLN H . n A 1 6 SER 6 7 7 SER SER H . n A 1 7 GLY 7 8 8 GLY GLY H . n A 1 8 GLY 8 9 9 GLY GLY H . n A 1 9 ASP 9 10 10 ASP ASP H . n A 1 10 LEU 10 11 11 LEU LEU H . n A 1 11 ALA 11 12 12 ALA ALA H . n A 1 12 PRO 12 13 13 PRO PRO H . n A 1 13 PRO 13 14 14 PRO PRO H . n A 1 14 GLY 14 15 15 GLY GLY H . n A 1 15 GLY 15 16 16 GLY GLY H . n A 1 16 SER 16 17 17 SER SER H . n A 1 17 LEU 17 18 18 LEU LEU H . n A 1 18 ARG 18 19 19 ARG ARG H . n A 1 19 LEU 19 20 20 LEU LEU H . n A 1 20 SER 20 21 21 SER SER H . n A 1 21 CYS 21 22 22 CYS CYS H . n A 1 22 GLU 22 23 23 GLU GLU H . n A 1 23 ALA 23 24 24 ALA ALA H . n A 1 24 SER 24 25 25 SER SER H . n A 1 25 GLY 25 26 26 GLY GLY H . n A 1 26 ILE 26 27 27 ILE ILE H . n A 1 27 ILE 27 28 28 ILE ILE H . n A 1 28 VAL 28 29 29 VAL VAL H . n A 1 29 SER 29 30 30 SER SER H . n A 1 30 SER 30 31 31 SER SER H . n A 1 31 ASN 31 32 32 ASN ASN H . n A 1 32 TYR 32 33 33 TYR TYR H . n A 1 33 MET 33 34 34 MET MET H . n A 1 34 THR 34 35 35 THR THR H . n A 1 35 TRP 35 36 36 TRP TRP H . n A 1 36 VAL 36 37 37 VAL VAL H . n A 1 37 ARG 37 38 38 ARG ARG H . n A 1 38 GLN 38 39 39 GLN GLN H . n A 1 39 ALA 39 40 40 ALA ALA H . n A 1 40 PRO 40 41 41 PRO PRO H . n A 1 41 GLY 41 42 42 GLY GLY H . n A 1 42 LYS 42 43 43 LYS LYS H . n A 1 43 GLY 43 44 44 GLY GLY H . n A 1 44 LEU 44 45 45 LEU LEU H . n A 1 45 GLU 45 46 46 GLU GLU H . n A 1 46 TRP 46 47 47 TRP TRP H . n A 1 47 VAL 47 48 48 VAL VAL H . n A 1 48 SER 48 49 49 SER SER H . n A 1 49 LEU 49 50 50 LEU LEU H . n A 1 50 ILE 50 51 51 ILE ILE H . n A 1 51 PHE 51 52 52 PHE PHE H . n A 1 52 ALA 52 53 53 ALA ALA H . n A 1 53 GLY 53 54 54 GLY GLY H . n A 1 54 GLY 54 55 55 GLY GLY H . n A 1 55 SER 55 56 56 SER SER H . n A 1 56 THR 56 57 57 THR THR H . n A 1 57 PHE 57 58 58 PHE PHE H . n A 1 58 TYR 58 59 59 TYR TYR H . n A 1 59 ALA 59 60 60 ALA ALA H . n A 1 60 ASP 60 61 61 ASP ASP H . n A 1 61 SER 61 62 62 SER SER H . n A 1 62 VAL 62 63 63 VAL VAL H . n A 1 63 LYS 63 64 64 LYS LYS H . n A 1 64 GLY 64 65 65 GLY GLY H . n A 1 65 ARG 65 66 66 ARG ARG H . n A 1 66 PHE 66 67 67 PHE PHE H . n A 1 67 THR 67 68 68 THR THR H . n A 1 68 VAL 68 69 69 VAL VAL H . n A 1 69 SER 69 70 70 SER SER H . n A 1 70 ARG 70 71 71 ARG ARG H . n A 1 71 ASP 71 72 72 ASP ASP H . n A 1 72 ASN 72 73 73 ASN ASN H . n A 1 73 SER 73 74 74 SER SER H . n A 1 74 LYS 74 75 75 LYS LYS H . n A 1 75 ASN 75 76 76 ASN ASN H . n A 1 76 THR 76 77 77 THR THR H . n A 1 77 LEU 77 78 78 LEU LEU H . n A 1 78 TYR 78 79 79 TYR TYR H . n A 1 79 LEU 79 80 80 LEU LEU H . n A 1 80 GLN 80 81 81 GLN GLN H . n A 1 81 MET 81 82 82 MET MET H . n A 1 82 SER 82 83 83 SER SER H . n A 1 83 SER 83 84 84 SER SER H . n A 1 84 LEU 84 85 85 LEU LEU H . n A 1 85 LYS 85 86 86 LYS LYS H . n A 1 86 PRO 86 87 87 PRO PRO H . n A 1 87 GLU 87 88 88 GLU GLU H . n A 1 88 ASP 88 89 89 ASP ASP H . n A 1 89 THR 89 90 90 THR THR H . n A 1 90 ALA 90 91 91 ALA ALA H . n A 1 91 VAL 91 92 92 VAL VAL H . n A 1 92 TYR 92 93 93 TYR TYR H . n A 1 93 PHE 93 94 94 PHE PHE H . n A 1 94 CYS 94 95 95 CYS CYS H . n A 1 95 ALA 95 96 96 ALA ALA H . n A 1 96 ARG 96 97 97 ARG ARG H . n A 1 97 ASP 97 98 98 ASP ASP H . n A 1 98 LEU 98 99 99 LEU LEU H . n A 1 99 ARG 99 100 100 ARG ARG H . n A 1 100 GLU 100 101 101 GLU GLU H . n A 1 101 MET 101 102 102 MET MET H . n A 1 102 GLY 102 103 103 GLY GLY H . n A 1 103 GLY 103 104 104 GLY GLY H . n A 1 104 LEU 104 105 105 LEU LEU H . n A 1 105 ASP 105 106 106 ASP ASP H . n A 1 106 PHE 106 107 107 PHE PHE H . n A 1 107 TRP 107 108 108 TRP TRP H . n A 1 108 GLY 108 109 109 GLY GLY H . n A 1 109 GLN 109 110 110 GLN GLN H . n A 1 110 GLY 110 111 111 GLY GLY H . n A 1 111 ALA 111 112 112 ALA ALA H . n A 1 112 LEU 112 113 113 LEU LEU H . n A 1 113 VAL 113 114 114 VAL VAL H . n A 1 114 THR 114 115 115 THR THR H . n A 1 115 VAL 115 116 116 VAL VAL H . n A 1 116 SER 116 117 117 SER SER H . n A 1 117 SER 117 118 118 SER SER H . n B 2 1 ILE 1 2 2 ILE ILE L . n B 2 2 GLN 2 3 3 GLN GLN L . n B 2 3 MET 3 4 4 MET MET L . n B 2 4 THR 4 5 5 THR THR L . n B 2 5 GLN 5 6 6 GLN GLN L . n B 2 6 SER 6 7 7 SER SER L . n B 2 7 PRO 7 8 8 PRO PRO L . n B 2 8 SER 8 9 9 SER SER L . n B 2 9 SER 9 10 10 SER SER L . n B 2 10 VAL 10 11 11 VAL VAL L . n B 2 11 SER 11 12 12 SER SER L . n B 2 12 ALA 12 13 13 ALA ALA L . n B 2 13 SER 13 14 14 SER SER L . n B 2 14 ILE 14 15 15 ILE ILE L . n B 2 15 GLY 15 16 16 GLY GLY L . n B 2 16 ASP 16 17 17 ASP ASP L . n B 2 17 THR 17 18 18 THR THR L . n B 2 18 VAL 18 19 19 VAL VAL L . n B 2 19 THR 19 20 20 THR THR L . n B 2 20 ILE 20 21 21 ILE ILE L . n B 2 21 THR 21 22 22 THR THR L . n B 2 22 CYS 22 23 23 CYS CYS L . n B 2 23 ARG 23 24 24 ARG ARG L . n B 2 24 ALA 24 25 25 ALA ALA L . n B 2 25 SER 25 26 26 SER SER L . n B 2 26 GLN 26 27 27 GLN GLN L . n B 2 27 GLY 27 28 28 GLY GLY L . n B 2 28 ILE 28 29 29 ILE ILE L . n B 2 29 PRO 29 30 30 PRO PRO L . n B 2 30 SER 30 31 31 SER SER L . n B 2 31 TRP 31 32 32 TRP TRP L . n B 2 32 VAL 32 33 33 VAL VAL L . n B 2 33 ALA 33 34 34 ALA ALA L . n B 2 34 TRP 34 35 35 TRP TRP L . n B 2 35 TYR 35 36 36 TYR TYR L . n B 2 36 GLN 36 37 37 GLN GLN L . n B 2 37 GLN 37 38 38 GLN GLN L . n B 2 38 LYS 38 39 39 LYS LYS L . n B 2 39 PRO 39 40 40 PRO PRO L . n B 2 40 GLY 40 41 41 GLY GLY L . n B 2 41 LYS 41 42 42 LYS LYS L . n B 2 42 ALA 42 43 43 ALA ALA L . n B 2 43 PRO 43 44 44 PRO PRO L . n B 2 44 LYS 44 45 45 LYS LYS L . n B 2 45 LEU 45 46 46 LEU LEU L . n B 2 46 LEU 46 47 47 LEU LEU L . n B 2 47 ILE 47 48 48 ILE ILE L . n B 2 48 TYR 48 49 49 TYR TYR L . n B 2 49 GLY 49 50 50 GLY GLY L . n B 2 50 ALA 50 51 51 ALA ALA L . n B 2 51 SER 51 52 52 SER SER L . n B 2 52 ASN 52 53 53 ASN ASN L . n B 2 53 LEU 53 54 54 LEU LEU L . n B 2 54 GLN 54 55 55 GLN GLN L . n B 2 55 ARG 55 56 56 ARG ARG L . n B 2 56 GLY 56 57 57 GLY GLY L . n B 2 57 VAL 57 58 58 VAL VAL L . n B 2 58 PRO 58 59 59 PRO PRO L . n B 2 59 SER 59 60 60 SER SER L . n B 2 60 ARG 60 61 61 ARG ARG L . n B 2 61 PHE 61 62 62 PHE PHE L . n B 2 62 SER 62 63 63 SER SER L . n B 2 63 GLY 63 64 64 GLY GLY L . n B 2 64 SER 64 65 65 SER SER L . n B 2 65 GLY 65 66 66 GLY GLY L . n B 2 66 SER 66 67 67 SER SER L . n B 2 67 GLY 67 68 68 GLY GLY L . n B 2 68 THR 68 69 69 THR THR L . n B 2 69 ASP 69 70 70 ASP ASP L . n B 2 70 PHE 70 71 71 PHE PHE L . n B 2 71 THR 71 72 72 THR THR L . n B 2 72 LEU 72 73 73 LEU LEU L . n B 2 73 THR 73 74 74 THR THR L . n B 2 74 ILE 74 75 75 ILE ILE L . n B 2 75 SER 75 76 76 SER SER L . n B 2 76 SER 76 77 77 SER SER L . n B 2 77 LEU 77 78 78 LEU LEU L . n B 2 78 GLN 78 79 79 GLN GLN L . n B 2 79 PRO 79 80 80 PRO PRO L . n B 2 80 GLU 80 81 81 GLU GLU L . n B 2 81 ASP 81 82 82 ASP ASP L . n B 2 82 LEU 82 83 83 LEU LEU L . n B 2 83 ALA 83 84 84 ALA ALA L . n B 2 84 VAL 84 85 85 VAL VAL L . n B 2 85 TYR 85 86 86 TYR TYR L . n B 2 86 TYR 86 87 87 TYR TYR L . n B 2 87 CYS 87 88 88 CYS CYS L . n B 2 88 HIS 88 89 89 HIS HIS L . n B 2 89 GLN 89 90 90 GLN GLN L . n B 2 90 SER 90 91 91 SER SER L . n B 2 91 ASP 91 92 92 ASP ASP L . n B 2 92 SER 92 93 93 SER SER L . n B 2 93 LEU 93 94 94 LEU LEU L . n B 2 94 PRO 94 95 95 PRO PRO L . n B 2 95 GLY 95 96 96 GLY GLY L . n B 2 96 ILE 96 97 97 ILE ILE L . n B 2 97 PHE 97 98 98 PHE PHE L . n B 2 98 GLY 98 99 99 GLY GLY L . n B 2 99 GLY 99 100 100 GLY GLY L . n B 2 100 GLY 100 101 101 GLY GLY L . n B 2 101 THR 101 102 102 THR THR L . n B 2 102 LYS 102 103 103 LYS LYS L . n B 2 103 VAL 103 104 104 VAL VAL L . n B 2 104 GLU 104 105 105 GLU GLU L . n B 2 105 ILE 105 106 106 ILE ILE L . n B 2 106 LYS 106 107 107 LYS LYS L . n C 3 1 VAL 1 327 327 VAL VAL S . n C 3 2 ARG 2 328 328 ARG ARG S . n C 3 3 PHE 3 329 329 PHE PHE S . n C 3 4 PRO 4 330 330 PRO PRO S . n C 3 5 ASN 5 331 331 ASN ASN S . n C 3 6 ILE 6 332 332 ILE ILE S . n C 3 7 THR 7 333 333 THR THR S . n C 3 8 ASN 8 334 334 ASN ASN S . n C 3 9 LEU 9 335 335 LEU LEU S . n C 3 10 CYS 10 336 336 CYS CYS S . n C 3 11 PRO 11 337 337 PRO PRO S . n C 3 12 PHE 12 338 338 PHE PHE S . n C 3 13 HIS 13 339 339 HIS HIS S . n C 3 14 GLU 14 340 340 GLU GLU S . n C 3 15 VAL 15 341 341 VAL VAL S . n C 3 16 PHE 16 342 342 PHE PHE S . n C 3 17 ASN 17 343 343 ASN ASN S . n C 3 18 ALA 18 344 344 ALA ALA S . n C 3 19 THR 19 345 345 THR THR S . n C 3 20 THR 20 346 346 THR THR S . n C 3 21 PHE 21 347 347 PHE PHE S . n C 3 22 ALA 22 348 348 ALA ALA S . n C 3 23 SER 23 349 349 SER SER S . n C 3 24 VAL 24 350 350 VAL VAL S . n C 3 25 TYR 25 351 351 TYR TYR S . n C 3 26 ALA 26 352 352 ALA ALA S . n C 3 27 TRP 27 353 353 TRP TRP S . n C 3 28 ASN 28 354 354 ASN ASN S . n C 3 29 ARG 29 355 355 ARG ARG S . n C 3 30 LYS 30 356 356 LYS LYS S . n C 3 31 ARG 31 357 357 ARG ARG S . n C 3 32 ILE 32 358 358 ILE ILE S . n C 3 33 SER 33 359 359 SER SER S . n C 3 34 ASN 34 360 360 ASN ASN S . n C 3 35 CYS 35 361 361 CYS CYS S . n C 3 36 VAL 36 362 362 VAL VAL S . n C 3 37 ALA 37 363 363 ALA ALA S . n C 3 38 ASP 38 364 364 ASP ASP S . n C 3 39 TYR 39 365 365 TYR TYR S . n C 3 40 SER 40 366 366 SER SER S . n C 3 41 VAL 41 367 367 VAL VAL S . n C 3 42 ILE 42 368 368 ILE ILE S . n C 3 43 TYR 43 369 369 TYR TYR S . n C 3 44 ASN 44 370 370 ASN ASN S . n C 3 45 PHE 45 371 371 PHE PHE S . n C 3 46 ALA 46 372 372 ALA ALA S . n C 3 47 PRO 47 373 373 PRO PRO S . n C 3 48 PHE 48 374 374 PHE PHE S . n C 3 49 PHE 49 375 375 PHE PHE S . n C 3 50 ALA 50 376 376 ALA ALA S . n C 3 51 PHE 51 377 377 PHE PHE S . n C 3 52 LYS 52 378 378 LYS LYS S . n C 3 53 CYS 53 379 379 CYS CYS S . n C 3 54 TYR 54 380 380 TYR TYR S . n C 3 55 GLY 55 381 381 GLY GLY S . n C 3 56 VAL 56 382 382 VAL VAL S . n C 3 57 SER 57 383 383 SER SER S . n C 3 58 PRO 58 384 384 PRO PRO S . n C 3 59 THR 59 385 385 THR THR S . n C 3 60 LYS 60 386 386 LYS LYS S . n C 3 61 LEU 61 387 387 LEU LEU S . n C 3 62 ASN 62 388 388 ASN ASN S . n C 3 63 ASP 63 389 389 ASP ASP S . n C 3 64 LEU 64 390 390 LEU LEU S . n C 3 65 CYS 65 391 391 CYS CYS S . n C 3 66 PHE 66 392 392 PHE PHE S . n C 3 67 THR 67 393 393 THR THR S . n C 3 68 ASN 68 394 394 ASN ASN S . n C 3 69 VAL 69 395 395 VAL VAL S . n C 3 70 TYR 70 396 396 TYR TYR S . n C 3 71 ALA 71 397 397 ALA ALA S . n C 3 72 ASP 72 398 398 ASP ASP S . n C 3 73 SER 73 399 399 SER SER S . n C 3 74 PHE 74 400 400 PHE PHE S . n C 3 75 VAL 75 401 401 VAL VAL S . n C 3 76 ILE 76 402 402 ILE ILE S . n C 3 77 ARG 77 403 403 ARG ARG S . n C 3 78 GLY 78 404 404 GLY GLY S . n C 3 79 ASN 79 405 405 ASN ASN S . n C 3 80 GLU 80 406 406 GLU GLU S . n C 3 81 VAL 81 407 407 VAL VAL S . n C 3 82 SER 82 408 408 SER SER S . n C 3 83 GLN 83 409 409 GLN GLN S . n C 3 84 ILE 84 410 410 ILE ILE S . n C 3 85 ALA 85 411 411 ALA ALA S . n C 3 86 PRO 86 412 412 PRO PRO S . n C 3 87 GLY 87 413 413 GLY GLY S . n C 3 88 GLN 88 414 414 GLN GLN S . n C 3 89 THR 89 415 415 THR THR S . n C 3 90 GLY 90 416 416 GLY GLY S . n C 3 91 ASN 91 417 417 ASN ASN S . n C 3 92 ILE 92 418 418 ILE ILE S . n C 3 93 ALA 93 419 419 ALA ALA S . n C 3 94 ASP 94 420 420 ASP ASP S . n C 3 95 TYR 95 421 421 TYR TYR S . n C 3 96 ASN 96 422 422 ASN ASN S . n C 3 97 TYR 97 423 423 TYR TYR S . n C 3 98 LYS 98 424 424 LYS LYS S . n C 3 99 LEU 99 425 425 LEU LEU S . n C 3 100 PRO 100 426 426 PRO PRO S . n C 3 101 ASP 101 427 427 ASP ASP S . n C 3 102 ASP 102 428 428 ASP ASP S . n C 3 103 PHE 103 429 429 PHE PHE S . n C 3 104 THR 104 430 430 THR THR S . n C 3 105 GLY 105 431 431 GLY GLY S . n C 3 106 CYS 106 432 432 CYS CYS S . n C 3 107 VAL 107 433 433 VAL VAL S . n C 3 108 ILE 108 434 434 ILE ILE S . n C 3 109 ALA 109 435 435 ALA ALA S . n C 3 110 TRP 110 436 436 TRP TRP S . n C 3 111 ASN 111 437 437 ASN ASN S . n C 3 112 SER 112 438 438 SER SER S . n C 3 113 ASN 113 439 439 ASN ASN S . n C 3 114 LYS 114 440 440 LYS LYS S . n C 3 115 LEU 115 441 441 LEU LEU S . n C 3 116 ASP 116 442 442 ASP ASP S . n C 3 117 SER 117 443 443 SER SER S . n C 3 118 LYS 118 444 444 LYS LYS S . n C 3 119 PRO 119 445 445 PRO PRO S . n C 3 120 SER 120 446 446 SER SER S . n C 3 121 GLY 121 447 447 GLY GLY S . n C 3 122 ASN 122 448 448 ASN ASN S . n C 3 123 TYR 123 449 449 TYR TYR S . n C 3 124 ASN 124 450 450 ASN ASN S . n C 3 125 TYR 125 451 451 TYR TYR S . n C 3 126 LEU 126 452 452 LEU LEU S . n C 3 127 TYR 127 453 453 TYR TYR S . n C 3 128 ARG 128 454 454 ARG ARG S . n C 3 129 PHE 129 455 455 PHE PHE S . n C 3 130 LEU 130 456 456 LEU LEU S . n C 3 131 ARG 131 457 457 ARG ARG S . n C 3 132 LYS 132 458 458 LYS LYS S . n C 3 133 SER 133 459 459 SER SER S . n C 3 134 LYS 134 460 460 LYS LYS S . n C 3 135 LEU 135 461 461 LEU LEU S . n C 3 136 LYS 136 462 462 LYS LYS S . n C 3 137 PRO 137 463 463 PRO PRO S . n C 3 138 PHE 138 464 464 PHE PHE S . n C 3 139 GLU 139 465 465 GLU GLU S . n C 3 140 ARG 140 466 466 ARG ARG S . n C 3 141 ASP 141 467 467 ASP ASP S . n C 3 142 ILE 142 468 468 ILE ILE S . n C 3 143 SER 143 469 469 SER SER S . n C 3 144 THR 144 470 470 THR THR S . n C 3 145 GLU 145 471 471 GLU GLU S . n C 3 146 ILE 146 472 472 ILE ILE S . n C 3 147 TYR 147 473 473 TYR TYR S . n C 3 148 GLN 148 474 474 GLN GLN S . n C 3 149 VAL 149 475 475 VAL VAL S . n C 3 150 GLY 150 476 476 GLY GLY S . n C 3 151 ASN 151 477 477 ASN ASN S . n C 3 152 LYS 152 478 478 LYS LYS S . n C 3 153 PRO 153 479 479 PRO PRO S . n C 3 154 CYS 154 480 480 CYS CYS S . n C 3 155 ASN 155 481 481 ASN ASN S . n C 3 156 GLY 156 482 482 GLY GLY S . n C 3 157 VAL 157 483 483 VAL VAL S . n C 3 158 ALA 158 484 484 ALA ALA S . n C 3 159 GLY 159 485 485 GLY GLY S . n C 3 160 PRO 160 486 486 PRO PRO S . n C 3 161 ASN 161 487 487 ASN ASN S . n C 3 162 CYS 162 488 488 CYS CYS S . n C 3 163 TYR 163 489 489 TYR TYR S . n C 3 164 SER 164 490 490 SER SER S . n C 3 165 PRO 165 491 491 PRO PRO S . n C 3 166 LEU 166 492 492 LEU LEU S . n C 3 167 GLN 167 493 493 GLN GLN S . n C 3 168 SER 168 494 494 SER SER S . n C 3 169 TYR 169 495 495 TYR TYR S . n C 3 170 GLY 170 496 496 GLY GLY S . n C 3 171 PHE 171 497 497 PHE PHE S . n C 3 172 ARG 172 498 498 ARG ARG S . n C 3 173 PRO 173 499 499 PRO PRO S . n C 3 174 THR 174 500 500 THR THR S . n C 3 175 TYR 175 501 501 TYR TYR S . n C 3 176 GLY 176 502 502 GLY GLY S . n C 3 177 VAL 177 503 503 VAL VAL S . n C 3 178 GLY 178 504 504 GLY GLY S . n C 3 179 HIS 179 505 505 HIS HIS S . n C 3 180 GLN 180 506 506 GLN GLN S . n C 3 181 PRO 181 507 507 PRO PRO S . n C 3 182 TYR 182 508 508 TYR TYR S . n C 3 183 ARG 183 509 509 ARG ARG S . n C 3 184 VAL 184 510 510 VAL VAL S . n C 3 185 VAL 185 511 511 VAL VAL S . n C 3 186 VAL 186 512 512 VAL VAL S . n C 3 187 LEU 187 513 513 LEU LEU S . n C 3 188 SER 188 514 514 SER SER S . n C 3 189 PHE 189 515 515 PHE PHE S . n C 3 190 GLU 190 516 516 GLU GLU S . n C 3 191 LEU 191 517 517 LEU LEU S . n C 3 192 LEU 192 518 518 LEU LEU S . n C 3 193 HIS 193 519 519 HIS HIS S . n C 3 194 ALA 194 520 520 ALA ALA S . n C 3 195 PRO 195 521 521 PRO PRO S . n C 3 196 ALA 196 522 522 ALA ALA S . n C 3 197 THR 197 523 523 THR THR S . n C 3 198 VAL 198 524 524 VAL VAL S . n C 3 199 CYS 199 525 525 CYS CYS S . n C 3 200 GLY 200 526 526 GLY GLY S . n C 3 201 PRO 201 527 527 PRO PRO S . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 529 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id S _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9E21 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9E21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9E21 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9E21 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.10 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3372 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.464 ? 4585 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 4.093 ? 483 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.043 ? 498 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 592 ? f_plane_restr ? ? ? # _struct.entry_id 9E21 _struct.title 'CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9E21 _struct_keywords.text 'SARS-CoV-2, Antibody, RBD, Immune system, Viral protein-immune system complex' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9E21 9E21 ? 1 ? 1 2 PDB 9E21 9E21 ? 2 ? 1 3 PDB 9E21 9E21 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9E21 H 1 ? 117 ? 9E21 2 ? 118 ? 2 118 2 2 9E21 L 1 ? 106 ? 9E21 2 ? 107 ? 2 107 3 3 9E21 S 1 ? 201 ? 9E21 327 ? 527 ? 327 527 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 27 ? ASN A 31 ? ILE H 28 ASN H 32 5 ? 5 HELX_P HELX_P2 AA2 LYS A 85 ? THR A 89 ? LYS H 86 THR H 90 5 ? 5 HELX_P HELX_P3 AA3 PRO C 11 ? ASN C 17 ? PRO S 337 ASN S 343 1 ? 7 HELX_P HELX_P4 AA4 SER C 57 ? LEU C 64 ? SER S 383 LEU S 390 5 ? 8 HELX_P HELX_P5 AA5 GLU C 80 ? ILE C 84 ? GLU S 406 ILE S 410 5 ? 5 HELX_P HELX_P6 AA6 GLY C 90 ? ASN C 96 ? GLY S 416 ASN S 422 1 ? 7 HELX_P HELX_P7 AA7 GLY C 176 ? GLN C 180 ? GLY S 502 GLN S 506 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 94 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? C CYS 10 SG ? ? ? 1_555 C CYS 35 SG ? ? S CYS 336 S CYS 361 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? C CYS 53 SG ? ? ? 1_555 C CYS 106 SG ? ? S CYS 379 S CYS 432 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? C CYS 154 SG ? ? ? 1_555 C CYS 162 SG ? ? S CYS 480 S CYS 488 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? C ASN 5 ND2 ? ? ? 1_555 D NAG . C1 ? ? S ASN 331 S NAG 601 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN C 5 ? NAG S 601 ? 1_555 ASN S 331 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 21 ? CYS A 94 ? CYS H 22 ? 1_555 CYS H 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS C 10 ? CYS C 35 ? CYS S 336 ? 1_555 CYS S 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS C 53 ? CYS C 106 ? CYS S 379 ? 1_555 CYS S 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS C 154 ? CYS C 162 ? CYS S 480 ? 1_555 CYS S 488 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 6 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 2 ? SER A 6 ? GLN H 3 SER H 7 AA1 2 LEU A 17 ? SER A 24 ? LEU H 18 SER H 25 AA1 3 THR A 76 ? MET A 81 ? THR H 77 MET H 82 AA1 4 PHE A 66 ? ASP A 71 ? PHE H 67 ASP H 72 AA2 1 LEU A 10 ? ALA A 11 ? LEU H 11 ALA H 12 AA2 2 ALA A 111 ? VAL A 115 ? ALA H 112 VAL H 116 AA2 3 ALA A 90 ? LEU A 98 ? ALA H 91 LEU H 99 AA2 4 TYR A 32 ? GLN A 38 ? TYR H 33 GLN H 39 AA2 5 LEU A 44 ? ILE A 50 ? LEU H 45 ILE H 51 AA2 6 THR A 56 ? TYR A 58 ? THR H 57 TYR H 59 AA3 1 LEU A 10 ? ALA A 11 ? LEU H 11 ALA H 12 AA3 2 ALA A 111 ? VAL A 115 ? ALA H 112 VAL H 116 AA3 3 ALA A 90 ? LEU A 98 ? ALA H 91 LEU H 99 AA3 4 GLY A 103 ? TRP A 107 ? GLY H 104 TRP H 108 AA4 1 MET B 3 ? GLN B 5 ? MET L 4 GLN L 6 AA4 2 VAL B 18 ? ALA B 24 ? VAL L 19 ALA L 25 AA4 3 ASP B 69 ? ILE B 74 ? ASP L 70 ILE L 75 AA4 4 PHE B 61 ? SER B 66 ? PHE L 62 SER L 67 AA5 1 VAL B 10 ? ALA B 12 ? VAL L 11 ALA L 13 AA5 2 THR B 101 ? ILE B 105 ? THR L 102 ILE L 106 AA5 3 VAL B 84 ? GLN B 89 ? VAL L 85 GLN L 90 AA5 4 VAL B 32 ? GLN B 37 ? VAL L 33 GLN L 38 AA5 5 LYS B 44 ? TYR B 48 ? LYS L 45 TYR L 49 AA5 6 ASN B 52 ? LEU B 53 ? ASN L 53 LEU L 54 AA6 1 ASN C 28 ? ILE C 32 ? ASN S 354 ILE S 358 AA6 2 ASN C 68 ? ILE C 76 ? ASN S 394 ILE S 402 AA6 3 TYR C 182 ? GLU C 190 ? TYR S 508 GLU S 516 AA6 4 GLY C 105 ? ASN C 111 ? GLY S 431 ASN S 437 AA6 5 ALA C 50 ? TYR C 54 ? ALA S 376 TYR S 380 AA7 1 LEU C 126 ? ARG C 128 ? LEU S 452 ARG S 454 AA7 2 LEU C 166 ? SER C 168 ? LEU S 492 SER S 494 AA8 1 TYR C 147 ? GLN C 148 ? TYR S 473 GLN S 474 AA8 2 CYS C 162 ? TYR C 163 ? CYS S 488 TYR S 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 2 ? N GLN H 3 O SER A 24 ? O SER H 25 AA1 2 3 N LEU A 17 ? N LEU H 18 O MET A 81 ? O MET H 82 AA1 3 4 O GLN A 80 ? O GLN H 81 N THR A 67 ? N THR H 68 AA2 1 2 N ALA A 11 ? N ALA H 12 O THR A 114 ? O THR H 115 AA2 2 3 O ALA A 111 ? O ALA H 112 N TYR A 92 ? N TYR H 93 AA2 3 4 O ASP A 97 ? O ASP H 98 N TYR A 32 ? N TYR H 33 AA2 4 5 N ARG A 37 ? N ARG H 38 O GLU A 45 ? O GLU H 46 AA2 5 6 N LEU A 49 ? N LEU H 50 O PHE A 57 ? O PHE H 58 AA3 1 2 N ALA A 11 ? N ALA H 12 O THR A 114 ? O THR H 115 AA3 2 3 O ALA A 111 ? O ALA H 112 N TYR A 92 ? N TYR H 93 AA3 3 4 N ARG A 96 ? N ARG H 97 O PHE A 106 ? O PHE H 107 AA4 1 2 N THR B 4 ? N THR L 5 O ARG B 23 ? O ARG L 24 AA4 2 3 N CYS B 22 ? N CYS L 23 O PHE B 70 ? O PHE L 71 AA4 3 4 O THR B 73 ? O THR L 74 N SER B 62 ? N SER L 63 AA5 1 2 N ALA B 12 ? N ALA L 13 O GLU B 104 ? O GLU L 105 AA5 2 3 O THR B 101 ? O THR L 102 N TYR B 85 ? N TYR L 86 AA5 3 4 O HIS B 88 ? O HIS L 89 N ALA B 33 ? N ALA L 34 AA5 4 5 N TRP B 34 ? N TRP L 35 O LEU B 46 ? O LEU L 47 AA5 5 6 N TYR B 48 ? N TYR L 49 O ASN B 52 ? O ASN L 53 AA6 1 2 N ASN C 28 ? N ASN S 354 O SER C 73 ? O SER S 399 AA6 2 3 N PHE C 74 ? N PHE S 400 O VAL C 184 ? O VAL S 510 AA6 3 4 O LEU C 187 ? O LEU S 513 N CYS C 106 ? N CYS S 432 AA6 4 5 O VAL C 107 ? O VAL S 433 N LYS C 52 ? N LYS S 378 AA7 1 2 N TYR C 127 ? N TYR S 453 O GLN C 167 ? O GLN S 493 AA8 1 2 N TYR C 147 ? N TYR S 473 O TYR C 163 ? O TYR S 489 # _pdbx_entry_details.entry_id 9E21 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO H 14 ? ? -64.71 1.77 2 1 GLU H 101 ? ? 69.47 -6.32 3 1 ALA L 51 ? ? 72.20 -7.06 4 1 ALA S 352 ? ? -102.17 74.33 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9E21 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9E21 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 252670 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name '52 Fab complex with RBD on XBB.1.5 spike' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 9E21 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 900 _em_imaging.nominal_defocus_max 2300 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9E21 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9E21 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-21 _em_admin.deposition_site RCSB _em_admin.entry_id 9E21 _em_admin.last_update 2025-07-30 _em_admin.map_release_date 2025-07-30 _em_admin.title 'CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING ONLY' # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 48.95 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.21.2_5419 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? ? # _em_specimen.concentration 2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI168178 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9E21 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #