HEADER LYASE 23-OCT-24 9E38 TITLE POLAROMONAS NAPHTHALENIVORANS PHOSPHOENOLPYRUVATE CARBOXYKINASE IN TITLE 2 COMPLEX WITH PHOSPHOGLYCOLIC ACID AND GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEP CARBOXYKINASE,PEPCK,GTP-DEPENDENT PHOSPHOENOLPYRUVATE COMPND 5 CARBOXYKINASE,GTP-PEPCK; COMPND 6 EC: 4.1.1.32; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POLAROMONAS NAPHTHALENIVORANS; SOURCE 3 ORGANISM_TAXID: 216465; SOURCE 4 GENE: PCKG, PNAP_0102, PCK1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS INHIBITOR COMPLEX, METABOLIC ENZYME, MULTI-TEMPERATURE, AMBIENT KEYWDS 2 TEMPERATURE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.MCLEOD,T.HOLYOAK REVDAT 1 29-OCT-25 9E38 0 JRNL AUTH M.J.MCLEOD,S.YAZDANI,S.A.E.BARWELL,T.HOLYOAK JRNL TITL STRUCTURAL MECHANISMS FOR COLD-ADAPTED ACTIVITY OF JRNL TITL 2 PHOSPHOENOLPYRUVATE CARBOXYKINASE. JRNL REF PROTEIN SCI. V. 34 70326 2025 JRNL REFN ESSN 1469-896X JRNL PMID 41099612 JRNL DOI 10.1002/PRO.70326 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 3 NUMBER OF REFLECTIONS : 90605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 4477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 68.4000 - 4.7400 1.00 3481 178 0.1356 0.1586 REMARK 3 2 4.7400 - 3.7600 1.00 3356 159 0.1198 0.1517 REMARK 3 3 3.7600 - 3.2800 1.00 3322 152 0.1387 0.1660 REMARK 3 4 3.2800 - 2.9800 1.00 3273 186 0.1579 0.1931 REMARK 3 5 2.9800 - 2.7700 1.00 3239 179 0.1653 0.2009 REMARK 3 6 2.7700 - 2.6100 1.00 3242 173 0.1660 0.2336 REMARK 3 7 2.6100 - 2.4800 1.00 3269 173 0.1693 0.2039 REMARK 3 8 2.4800 - 2.3700 1.00 3215 155 0.1652 0.2044 REMARK 3 9 2.3700 - 2.2800 0.99 3257 163 0.1657 0.2115 REMARK 3 10 2.2800 - 2.2000 0.99 3200 166 0.1635 0.1812 REMARK 3 11 2.2000 - 2.1300 0.99 3218 172 0.1589 0.2068 REMARK 3 12 2.1300 - 2.0700 0.99 3171 183 0.1663 0.2531 REMARK 3 13 2.0700 - 2.0100 0.99 3219 178 0.1772 0.2127 REMARK 3 14 2.0100 - 1.9700 0.99 3192 165 0.2022 0.2283 REMARK 3 15 1.9700 - 1.9200 0.99 3170 169 0.2385 0.2810 REMARK 3 16 1.9200 - 1.8800 0.99 3181 165 0.2313 0.2636 REMARK 3 17 1.8800 - 1.8400 0.99 3202 168 0.2409 0.2978 REMARK 3 18 1.8400 - 1.8100 0.99 3184 162 0.2554 0.2873 REMARK 3 19 1.8100 - 1.7800 0.98 3134 153 0.2664 0.2552 REMARK 3 20 1.7800 - 1.7400 0.99 3214 154 0.2817 0.3066 REMARK 3 21 1.7400 - 1.7200 0.98 3140 165 0.3070 0.3099 REMARK 3 22 1.7200 - 1.6900 0.93 3013 158 0.3167 0.3185 REMARK 3 23 1.6900 - 1.6700 0.79 2540 114 0.3363 0.2928 REMARK 3 24 1.6700 - 1.6400 0.72 2281 128 0.3510 0.3878 REMARK 3 25 1.6400 - 1.6200 0.67 2127 110 0.3659 0.4146 REMARK 3 26 1.6200 - 1.6000 0.60 1924 100 0.3855 0.3492 REMARK 3 27 1.6000 - 1.5800 0.56 1787 102 0.3983 0.4847 REMARK 3 28 1.5800 - 1.5600 0.53 1684 94 0.4265 0.3688 REMARK 3 29 1.5600 - 1.5400 0.48 1553 70 0.4131 0.5130 REMARK 3 30 1.5400 - 1.5200 0.43 1340 83 0.4330 0.4301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.258 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.478 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5127 REMARK 3 ANGLE : 0.895 7000 REMARK 3 CHIRALITY : 0.053 738 REMARK 3 PLANARITY : 0.007 914 REMARK 3 DIHEDRAL : 13.634 1870 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9E38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000288319. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : 7B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101139 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 68.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.10 REMARK 200 R MERGE FOR SHELL (I) : 2.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-CL PH 8.0, 0.4 M LICL2, 5 REMARK 280 MM MGCL2, 1 MM MNCL2, 30-40% PEG 8000, 10 MM PGA AND 10 MM GDP. REMARK 280 15 MG/ML PNPEPCK, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.20950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.81700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.82450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.81700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.20950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.82450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 MET A 6 REMARK 465 GLN A 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 212 O HOH A 801 2.13 REMARK 500 OE1 GLN A 549 O HOH A 802 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 69 75.84 -152.25 REMARK 500 LYS A 231 -88.53 -81.91 REMARK 500 ASP A 301 -42.97 -152.40 REMARK 500 ASN A 334 73.49 -155.97 REMARK 500 THR A 437 -54.92 76.38 REMARK 500 PHE A 477 19.16 57.28 REMARK 500 TYR A 530 -123.43 51.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1408 DISTANCE = 6.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 701 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 232 NZ REMARK 620 2 HIS A 252 NE2 87.9 REMARK 620 3 ASP A 301 OD1 94.9 93.8 REMARK 620 4 PGA A 704 O1P 108.8 160.6 94.5 REMARK 620 5 PGA A 704 O2P 174.9 97.0 86.5 66.1 REMARK 620 6 PGA A 704 O2 88.4 99.9 166.1 71.6 89.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 279 OG1 REMARK 620 2 GDP A 703 O1B 79.4 REMARK 620 3 PGA A 704 O3P 162.9 114.2 REMARK 620 4 HOH A 827 O 73.3 152.7 92.7 REMARK 620 5 HOH A 869 O 99.0 95.0 90.2 88.7 REMARK 620 6 HOH A 872 O 92.8 84.3 79.0 97.6 167.8 REMARK 620 N 1 2 3 4 5 DBREF 9E38 A 1 622 UNP A1VIE9 A1VIE9_POLNA 1 622 SEQRES 1 A 622 MET ASN GLN PRO ALA MET GLN GLY LEU ASN LEU ASN THR SEQRES 2 A 622 PRO ALA TYR VAL LYS ASN ALA LYS LEU ILE ALA TRP VAL SEQRES 3 A 622 ALA ASP MET VAL ALA LEU CYS LYS PRO ASP THR VAL TYR SEQRES 4 A 622 TRP CYS ASP GLY SER ASP ALA GLU TYR GLN ARG LEU CYS SEQRES 5 A 622 GLN GLN LEU VAL ASP ALA GLY THR PHE LYS LYS LEU ASN SEQRES 6 A 622 GLU ALA LYS ARG PRO ASN SER TYR LEU ALA CYS SER ASP SEQRES 7 A 622 PRO SER ASP VAL ALA ARG VAL GLU ASP ARG THR TYR ILE SEQRES 8 A 622 CYS SER ALA LYS GLU GLU ASN ALA GLY PRO THR ASN ASN SEQRES 9 A 622 TRP MET GLU PRO SER GLU MET ARG ALA THR LEU GLN PRO SEQRES 10 A 622 LEU PHE ASP GLY CYS MET ARG GLY ARG THR MET TYR VAL SEQRES 11 A 622 VAL PRO PHE SER MET GLY PRO LEU GLY SER PRO ILE ALA SEQRES 12 A 622 HIS ILE GLY ILE GLU LEU SER ASP SER PRO TYR VAL ALA SEQRES 13 A 622 VAL ASN MET LYS ILE MET THR ARG MET GLY LYS ALA VAL SEQRES 14 A 622 PHE GLU VAL LEU GLY THR GLU GLY ASP PHE VAL PRO CYS SEQRES 15 A 622 VAL HIS THR VAL GLY ALA PRO LEU ALA GLU GLY GLU GLN SEQRES 16 A 622 ASP VAL THR TRP PRO CYS ASN LYS THR LYS TYR ILE VAL SEQRES 17 A 622 HIS TYR PRO GLU THR ARG GLU ILE TRP SER TYR GLY SER SEQRES 18 A 622 GLY TYR GLY GLY ASN ALA LEU LEU GLY LYS LYS CYS PHE SEQRES 19 A 622 ALA LEU ARG ILE ALA SER ASN MET GLY ARG ASP GLU GLY SEQRES 20 A 622 TRP LEU ALA GLU HIS MET LEU ILE LEU GLY VAL THR ASN SEQRES 21 A 622 PRO GLU GLY LYS LYS TYR HIS VAL ALA ALA ALA PHE PRO SEQRES 22 A 622 SER ALA CYS GLY LYS THR ASN PHE SER MET LEU VAL PRO SEQRES 23 A 622 PRO ALA GLY PHE ASP GLY TRP SER VAL THR THR ILE GLY SEQRES 24 A 622 ASP ASP ILE ALA TRP ILE LYS PRO ALA ALA ASP GLY LYS SEQRES 25 A 622 LEU TYR ALA ILE ASN PRO GLU ALA GLY TYR PHE GLY VAL SEQRES 26 A 622 ALA PRO GLY THR ASN MET LEU THR ASN PRO ASN CYS MET SEQRES 27 A 622 LEU SER VAL ARG GLY ASN THR ILE PHE THR ASN VAL ALA SEQRES 28 A 622 LEU THR ASP ASP GLY ASP VAL TRP TRP GLU GLY MET GLU SEQRES 29 A 622 GLN ASP ALA PRO GLY LYS ALA LEU PRO ASP HIS LEU ILE SEQRES 30 A 622 ASP TRP GLN GLY LYS ASP TRP THR PRO GLN ILE ALA LYS SEQRES 31 A 622 GLU THR GLY ALA LYS ALA ALA HIS PRO ASN SER ARG PHE SEQRES 32 A 622 THR VAL ALA ALA THR ASN ASN PRO ALA LEU ASP SER ALA SEQRES 33 A 622 TRP ASP ASP PRO LYS GLY VAL ALA ILE ASP ALA PHE ILE SEQRES 34 A 622 PHE GLY GLY ARG ARG SER THR THR VAL PRO LEU VAL THR SEQRES 35 A 622 GLU ALA ARG SER TRP VAL GLU GLY VAL TYR MET ALA ALA SEQRES 36 A 622 THR MET GLY SER GLU THR THR ALA ALA ALA THR GLY GLN SEQRES 37 A 622 ALA GLY VAL VAL ARG ARG ASP PRO PHE ALA MET LEU PRO SEQRES 38 A 622 PHE MET GLY TYR ASN MET SER ASP TYR PHE GLN HIS TRP SEQRES 39 A 622 LEU ASP LEU GLY LYS LYS LEU ALA ALA SER GLY ALA THR SEQRES 40 A 622 LEU PRO LYS ILE TYR THR THR ASN TRP PHE ARG LYS GLY SEQRES 41 A 622 THR ASP GLY LYS PHE VAL TRP PRO GLY TYR GLY GLU ASN SEQRES 42 A 622 MET ARG VAL LEU ALA TRP MET ILE ASP ARG ILE GLU GLY SEQRES 43 A 622 LYS GLY GLN GLY GLU ASP HIS VAL THR GLY ILE SER PRO SEQRES 44 A 622 SER TYR GLU ASP LEU ASN TRP THR GLY LEU ASP PHE SER SEQRES 45 A 622 ALA ASP GLN PHE ASN THR VAL THR SER ILE ASP LYS ALA SEQRES 46 A 622 ALA TRP LEU LYS GLU LEU GLU LEU HIS ALA GLU LEU PHE SEQRES 47 A 622 LYS GLN LEU GLU HIS HIS LEU PRO LYS GLU LEU GLY GLU SEQRES 48 A 622 THR LYS ALA GLU ILE GLU ARG ARG LEU ALA ALA HET MN A 701 1 HET MG A 702 1 HET GDP A 703 28 HET PGA A 704 9 HET PGE A 705 10 HET 1PE A 706 16 HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM PGA 2-PHOSPHOGLYCOLIC ACID HETNAM PGE TRIETHYLENE GLYCOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 2 MN MN 2+ FORMUL 3 MG MG 2+ FORMUL 4 GDP C10 H15 N5 O11 P2 FORMUL 5 PGA C2 H5 O6 P FORMUL 6 PGE C6 H14 O4 FORMUL 7 1PE C10 H22 O6 FORMUL 8 HOH *608(H2 O) HELIX 1 AA1 ASN A 19 LYS A 34 1 16 HELIX 2 AA2 SER A 44 ALA A 58 1 15 HELIX 3 AA3 VAL A 85 ASP A 87 5 3 HELIX 4 AA4 LYS A 95 ALA A 99 5 5 HELIX 5 AA5 GLU A 107 ASP A 120 1 14 HELIX 6 AA6 SER A 152 THR A 163 1 12 HELIX 7 AA7 LYS A 167 GLY A 174 1 8 HELIX 8 AA8 TYR A 223 LEU A 228 1 6 HELIX 9 AA9 LEU A 236 GLY A 247 1 12 HELIX 10 AB1 GLY A 277 MET A 283 1 7 HELIX 11 AB2 ASN A 334 VAL A 341 1 8 HELIX 12 AB3 GLY A 362 ALA A 371 5 10 HELIX 13 AB4 THR A 385 GLY A 393 1 9 HELIX 14 AB5 THR A 408 ASN A 410 5 3 HELIX 15 AB6 SER A 446 MET A 457 1 12 HELIX 16 AB7 PRO A 476 MET A 479 5 4 HELIX 17 AB8 ASN A 486 ALA A 503 1 18 HELIX 18 AB9 GLY A 529 GLU A 532 5 4 HELIX 19 AC1 ASN A 533 GLU A 545 1 13 HELIX 20 AC2 SER A 560 LEU A 564 5 5 HELIX 21 AC3 SER A 572 SER A 581 1 10 HELIX 22 AC4 ASP A 583 LEU A 601 1 19 HELIX 23 AC5 PRO A 606 ALA A 622 1 17 SHEET 1 AA1 7 THR A 37 TRP A 40 0 SHEET 2 AA1 7 THR A 127 MET A 135 1 O VAL A 130 N TYR A 39 SHEET 3 AA1 7 HIS A 144 SER A 150 -1 O SER A 150 N TYR A 129 SHEET 4 AA1 7 VAL A 180 THR A 185 1 O HIS A 184 N LEU A 149 SHEET 5 AA1 7 GLU A 215 TYR A 219 1 O SER A 218 N VAL A 183 SHEET 6 AA1 7 TYR A 206 TYR A 210 -1 N VAL A 208 O TRP A 217 SHEET 7 AA1 7 THR A 89 ILE A 91 1 N TYR A 90 O ILE A 207 SHEET 1 AA2 3 THR A 37 TRP A 40 0 SHEET 2 AA2 3 THR A 127 MET A 135 1 O VAL A 130 N TYR A 39 SHEET 3 AA2 3 ARG A 164 MET A 165 -1 O ARG A 164 N SER A 134 SHEET 1 AA3 5 PHE A 61 LYS A 63 0 SHEET 2 AA3 5 TYR A 73 ALA A 75 -1 O LEU A 74 N LYS A 62 SHEET 3 AA3 5 ILE A 346 THR A 348 1 O PHE A 347 N TYR A 73 SHEET 4 AA3 5 ARG A 402 ALA A 406 -1 O ARG A 402 N THR A 348 SHEET 5 AA3 5 GLY A 321 VAL A 325 -1 N TYR A 322 O VAL A 405 SHEET 1 AA4 4 LEU A 249 GLU A 251 0 SHEET 2 AA4 4 ALA A 303 PRO A 307 -1 O ILE A 305 N LEU A 249 SHEET 3 AA4 4 LEU A 313 ILE A 316 -1 O ILE A 316 N TRP A 304 SHEET 4 AA4 4 VAL A 423 ALA A 424 -1 O VAL A 423 N ALA A 315 SHEET 1 AA5 6 SER A 294 GLY A 299 0 SHEET 2 AA5 6 LEU A 254 THR A 259 -1 N GLY A 257 O THR A 296 SHEET 3 AA5 6 LYS A 265 ALA A 271 -1 O TYR A 266 N VAL A 258 SHEET 4 AA5 6 ALA A 427 PHE A 430 1 O ILE A 429 N ALA A 271 SHEET 5 AA5 6 LYS A 510 THR A 514 1 O LYS A 510 N PHE A 428 SHEET 6 AA5 6 VAL A 441 GLU A 443 -1 N THR A 442 O THR A 513 SHEET 1 AA6 4 VAL A 358 TRP A 359 0 SHEET 2 AA6 4 ALA A 351 THR A 353 -1 N ALA A 351 O TRP A 359 SHEET 3 AA6 4 LEU A 376 ILE A 377 -1 O ILE A 377 N LEU A 352 SHEET 4 AA6 4 ASP A 383 TRP A 384 -1 O TRP A 384 N LEU A 376 SHEET 1 AA7 2 GLY A 458 GLU A 460 0 SHEET 2 AA7 2 VAL A 472 ARG A 474 -1 O ARG A 473 N SER A 459 SHEET 1 AA8 2 GLU A 551 HIS A 553 0 SHEET 2 AA8 2 GLY A 556 SER A 558 -1 O GLY A 556 N HIS A 553 LINK NZ LYS A 232 MN MN A 701 1555 1555 2.19 LINK NE2 HIS A 252 MN MN A 701 1555 1555 2.22 LINK OG1 THR A 279 MG MG A 702 1555 1555 2.41 LINK OD1 ASP A 301 MN MN A 701 1555 1555 2.16 LINK MN MN A 701 O1P PGA A 704 1555 1555 2.33 LINK MN MN A 701 O2P PGA A 704 1555 1555 2.29 LINK MN MN A 701 O2 PGA A 704 1555 1555 2.31 LINK MG MG A 702 O1B GDP A 703 1555 1555 2.06 LINK MG MG A 702 O3P PGA A 704 1555 1555 2.04 LINK MG MG A 702 O HOH A 827 1555 1555 2.27 LINK MG MG A 702 O HOH A 869 1555 1555 2.11 LINK MG MG A 702 O HOH A 872 1555 1555 2.10 CRYST1 68.419 85.649 113.634 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014616 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011676 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008800 0.00000 CONECT 1759 4918 CONECT 1936 4918 CONECT 2141 4919 CONECT 2312 4918 CONECT 4918 1759 1936 2312 4949 CONECT 4918 4950 4956 CONECT 4919 2141 4921 4951 5009 CONECT 4919 5051 5054 CONECT 4920 4921 4922 4923 4924 CONECT 4921 4919 4920 CONECT 4922 4920 CONECT 4923 4920 CONECT 4924 4920 4925 CONECT 4925 4924 4926 4927 4928 CONECT 4926 4925 CONECT 4927 4925 CONECT 4928 4925 4929 CONECT 4929 4928 4930 CONECT 4930 4929 4931 4932 CONECT 4931 4930 4936 CONECT 4932 4930 4933 4934 CONECT 4933 4932 CONECT 4934 4932 4935 4936 CONECT 4935 4934 CONECT 4936 4931 4934 4937 CONECT 4937 4936 4938 4947 CONECT 4938 4937 4939 CONECT 4939 4938 4940 CONECT 4940 4939 4941 4947 CONECT 4941 4940 4942 4943 CONECT 4942 4941 CONECT 4943 4941 4944 CONECT 4944 4943 4945 4946 CONECT 4945 4944 CONECT 4946 4944 4947 CONECT 4947 4937 4940 4946 CONECT 4948 4949 4950 4951 4952 CONECT 4949 4918 4948 4953 CONECT 4950 4918 4948 CONECT 4951 4919 4948 CONECT 4952 4948 CONECT 4953 4949 4954 CONECT 4954 4953 4955 4956 CONECT 4955 4954 CONECT 4956 4918 4954 CONECT 4957 4958 4959 CONECT 4958 4957 CONECT 4959 4957 4960 CONECT 4960 4959 4961 CONECT 4961 4960 4962 CONECT 4962 4961 4966 CONECT 4963 4964 CONECT 4964 4963 4965 CONECT 4965 4964 4966 CONECT 4966 4962 4965 CONECT 4967 4968 CONECT 4968 4967 4969 CONECT 4969 4968 4970 CONECT 4970 4969 4972 CONECT 4971 4972 4973 CONECT 4972 4970 4971 CONECT 4973 4971 4975 CONECT 4974 4975 4976 CONECT 4975 4973 4974 CONECT 4976 4974 4978 CONECT 4977 4978 4979 CONECT 4978 4976 4977 CONECT 4979 4977 4981 CONECT 4980 4981 4982 CONECT 4981 4979 4980 CONECT 4982 4980 CONECT 5009 4919 CONECT 5051 4919 CONECT 5054 4919 MASTER 307 0 6 23 33 0 0 6 5418 1 74 48 END