HEADER FLUORESCENT PROTEIN 13-NOV-24 9EBX TITLE CHIMERIC FLUORESCENCE BIOSENSOR FORMED FROM A LACTATE-BINDING PROTEIN TITLE 2 AND GFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN,METHYL-ACCEPTING CHEMOTAXIS COMPND 3 TRANSDUCER (TLPC); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: MTURQUOISE GFP (RESIDUES 10-153 AND 428-515) ATTACHED COMPND 7 TO LACTATE BINDING PROTEIN TLPC (RESIDUES 159-421) BY TWO SEPARATE COMPND 8 LINKERS, ONE FROM RESIDUES 154-158 AND ANOTHER FROM RESIDUES 425-427 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA, HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 6100, 85962; SOURCE 4 STRAIN: 26695; SOURCE 5 GENE: GFP, HP_0082; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ONESHOT; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BIOSENSOR, BINDING PROTEIN, CHIMERA, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.M.HORWITZ,J.A.AMBARIAN,L.WAIDMANN,K.M.DAVIS REVDAT 1 19-MAR-25 9EBX 0 JRNL AUTH P.C.ROSEN,S.M.HORWITZ,D.J.BROOKS,E.KIM,J.A.AMBARIAN, JRNL AUTH 2 L.WAIDMANN,K.M.DAVIS,G.YELLEN JRNL TITL STATE-DEPENDENT MOTION OF A GENETICALLY ENCODED FLUORESCENT JRNL TITL 2 BIOSENSOR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 122 24122 2025 JRNL REFN ESSN 1091-6490 JRNL PMID 40048274 JRNL DOI 10.1073/PNAS.2426324122 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487: 000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.9 REMARK 3 NUMBER OF REFLECTIONS : 16566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1300 - 5.5300 0.87 1242 135 0.1911 0.2053 REMARK 3 2 5.5300 - 4.3900 0.92 1310 147 0.1905 0.2298 REMARK 3 3 4.3900 - 3.8400 0.78 1121 121 0.2056 0.2545 REMARK 3 4 3.8400 - 3.4900 0.84 1201 138 0.2529 0.3032 REMARK 3 5 3.4800 - 3.2400 0.85 1230 121 0.2867 0.3550 REMARK 3 6 3.2400 - 3.0400 0.90 1287 148 0.2746 0.3413 REMARK 3 7 3.0400 - 2.8900 0.90 1275 143 0.2953 0.3784 REMARK 3 8 2.8900 - 2.7700 0.82 1165 131 0.3381 0.3974 REMARK 3 9 2.7700 - 2.6600 0.84 1218 125 0.3156 0.4507 REMARK 3 10 2.6600 - 2.5700 0.88 1276 146 0.3012 0.3733 REMARK 3 11 2.5700 - 2.4900 0.91 1292 133 0.3228 0.3463 REMARK 3 12 2.4900 - 2.4200 0.91 1304 157 0.3395 0.3991 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3590 REMARK 3 ANGLE : 1.242 4888 REMARK 3 CHIRALITY : 0.060 559 REMARK 3 PLANARITY : 0.015 639 REMARK 3 DIHEDRAL : 15.868 1205 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1000289871. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978532 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 0.7.15 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 1.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16566 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 46.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.03116 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.37150 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: BRIGHT YELLOW CHUNKY DIAMOND-SHAPED CRYSTALS, 200 X 100 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE HEXAHYDRATE, HEPES, REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 VAL A 10 REMARK 465 SER A 11 REMARK 465 HIS A 88 REMARK 465 GLY A 154 REMARK 465 ARG A 155 REMARK 465 THR A 156 REMARK 465 GLY A 157 REMARK 465 ILE A 158 REMARK 465 ASP A 159 REMARK 465 PRO A 160 REMARK 465 GLN A 303 REMARK 465 ASN A 304 REMARK 465 ASN A 402 REMARK 465 ASN A 403 REMARK 465 GLY A 404 REMARK 465 ILE A 506 REMARK 465 THR A 507 REMARK 465 LEU A 508 REMARK 465 GLY A 509 REMARK 465 MET A 510 REMARK 465 ASP A 511 REMARK 465 GLU A 512 REMARK 465 LEU A 513 REMARK 465 TYR A 514 REMARK 465 GLN A 515 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 GLU A 14 CG CD OE1 OE2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 LEU A 16 CD2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 TYR A 48 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LEU A 51 CG CD1 CD2 REMARK 470 ILE A 56 CD1 REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 ARG A 80 CZ NH1 NH2 REMARK 470 ASP A 83 CG OD1 OD2 REMARK 470 HIS A 84 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 85 CG SD CE REMARK 470 LYS A 86 CG CD CE NZ REMARK 470 GLN A 87 CG CD OE1 NE2 REMARK 470 ASP A 89 CG OD1 OD2 REMARK 470 SER A 93 OG REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 LYS A 108 CE NZ REMARK 470 LYS A 120 NZ REMARK 470 VAL A 127 CG1 CG2 REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 ASP A 140 CG OD1 OD2 REMARK 470 LYS A 147 CE NZ REMARK 470 SER A 153 OG REMARK 470 PHE A 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 165 CG1 CG2 REMARK 470 LEU A 166 CG CD1 CD2 REMARK 470 GLN A 167 CG CD OE1 NE2 REMARK 470 SER A 168 OG REMARK 470 GLN A 169 CG CD OE1 NE2 REMARK 470 THR A 171 OG1 CG2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LEU A 173 CG CD1 CD2 REMARK 470 LEU A 174 CG CD1 CD2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 LEU A 180 CG CD1 CD2 REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 SER A 208 OG REMARK 470 THR A 213 OG1 CG2 REMARK 470 ARG A 217 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 239 CG OD1 ND2 REMARK 470 GLU A 241 CG CD OE1 OE2 REMARK 470 ASN A 257 CG OD1 ND2 REMARK 470 ASN A 261 CG OD1 ND2 REMARK 470 GLU A 262 CG CD OE1 OE2 REMARK 470 ASN A 263 CG OD1 ND2 REMARK 470 THR A 265 OG1 CG2 REMARK 470 GLN A 267 CG CD OE1 NE2 REMARK 470 ILE A 268 CG1 CG2 CD1 REMARK 470 SER A 270 OG REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 VAL A 284 CG1 CG2 REMARK 470 ASN A 285 CG OD1 ND2 REMARK 470 ASP A 287 CG OD1 OD2 REMARK 470 LYS A 301 CG CD CE NZ REMARK 470 ASN A 302 CG OD1 ND2 REMARK 470 ILE A 306 CD1 REMARK 470 THR A 320 OG1 CG2 REMARK 470 LYS A 325 CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 LYS A 327 CG CD CE NZ REMARK 470 ARG A 345 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 346 CG CD OE1 OE2 REMARK 470 LYS A 350 CG CD CE NZ REMARK 470 ARG A 359 CD NE CZ NH1 NH2 REMARK 470 LYS A 363 CE NZ REMARK 470 GLN A 370 CG CD OE1 NE2 REMARK 470 LEU A 381 CG CD1 CD2 REMARK 470 SER A 382 OG REMARK 470 ILE A 391 CG1 CG2 CD1 REMARK 470 GLU A 399 CG CD OE1 OE2 REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 ASN A 405 CG OD1 ND2 REMARK 470 HIS A 406 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 413 CG CD CE NZ REMARK 470 VAL A 415 CG1 CG2 REMARK 470 ASN A 416 CG OD1 ND2 REMARK 470 LYS A 417 CG CD CE NZ REMARK 470 SER A 418 OG REMARK 470 LEU A 419 CG CD1 CD2 REMARK 470 ILE A 429 CG1 CG2 CD1 REMARK 470 ASP A 432 CG OD1 OD2 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 GLN A 434 CG CD OE1 NE2 REMARK 470 ILE A 438 CD1 REMARK 470 LYS A 439 CG CD CE NZ REMARK 470 ASN A 441 CG OD1 ND2 REMARK 470 LYS A 443 CG CD CE NZ REMARK 470 ASP A 450 CG OD1 OD2 REMARK 470 ILE A 465 CG1 CG2 CD1 REMARK 470 ASP A 467 CG OD1 OD2 REMARK 470 VAL A 470 CG1 CG2 REMARK 470 LEU A 471 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 78 -124.59 -86.48 REMARK 500 ALA A 79 137.33 76.69 REMARK 500 MET A 85 97.31 -65.88 REMARK 500 GLU A 97 -105.05 -112.04 REMARK 500 ASP A 140 -1.22 75.38 REMARK 500 HIS A 146 73.64 51.17 REMARK 500 THR A 162 -79.34 63.59 REMARK 500 SER A 164 -78.03 -92.30 REMARK 500 ASN A 238 -83.81 -68.29 REMARK 500 GLU A 241 101.22 -55.50 REMARK 500 MET A 249 -110.79 -97.41 REMARK 500 ASN A 266 -43.50 81.10 REMARK 500 MET A 299 164.48 65.24 REMARK 500 LYS A 301 78.29 -119.36 REMARK 500 VAL A 322 -60.50 -97.31 REMARK 500 LEU A 381 -127.70 43.23 REMARK 500 TRP A 407 51.92 -117.40 REMARK 500 ASP A 432 -113.05 -91.21 REMARK 500 LYS A 433 -64.71 148.77 REMARK 500 ASN A 436 48.07 38.61 REMARK 500 ASP A 474 -78.76 -93.37 REMARK 500 ASN A 475 103.23 -172.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 116 0.09 SIDE CHAIN REMARK 500 ARG A 191 0.11 SIDE CHAIN REMARK 500 ARG A 269 0.12 SIDE CHAIN REMARK 500 ARG A 492 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9EBW RELATED DB: PDB REMARK 900 9EBW CONTAINS THE SAME PROTEIN COMPLEXED WITH LACTATE DBREF 9EBX A 11 153 UNP P42212 GFP_AEQVI 2 146 DBREF 9EBX A 159 421 UNP O24911 O24911_HELPY 30 292 DBREF 9EBX A 426 515 UNP P42212 GFP_AEQVI 149 238 SEQADV 9EBX MET A 1 UNP P42212 INITIATING METHIONINE SEQADV 9EBX LYS A 2 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 3 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 4 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 5 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 6 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 7 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 8 UNP P42212 EXPRESSION TAG SEQADV 9EBX HIS A 9 UNP P42212 EXPRESSION TAG SEQADV 9EBX VAL A 10 UNP P42212 EXPRESSION TAG SEQADV 9EBX LEU A 73 UNP P42212 PHE 64 CONFLICT SEQADV 9EBX SWG A 74 UNP P42212 SER 65 CHROMOPHORE SEQADV 9EBX SWG A 74 UNP P42212 TYR 66 CHROMOPHORE SEQADV 9EBX SWG A 74 UNP P42212 GLY 67 CHROMOPHORE SEQADV 9EBX ALA A 79 UNP P42212 SER 72 CONFLICT SEQADV 9EBX SER A 152 UNP P42212 TYR 145 CONFLICT SEQADV 9EBX SER A 153 UNP P42212 ASN 146 CONFLICT SEQADV 9EBX GLY A 154 UNP P42212 LINKER SEQADV 9EBX ARG A 155 UNP P42212 LINKER SEQADV 9EBX THR A 156 UNP P42212 LINKER SEQADV 9EBX GLY A 157 UNP P42212 LINKER SEQADV 9EBX ILE A 158 UNP P42212 LINKER SEQADV 9EBX ASP A 159 UNP O24911 SER 30 CONFLICT SEQADV 9EBX PRO A 160 UNP O24911 TYR 31 CONFLICT SEQADV 9EBX PHE A 161 UNP O24911 LYS 32 CONFLICT SEQADV 9EBX THR A 162 UNP O24911 VAL 33 CONFLICT SEQADV 9EBX SER A 422 UNP O24911 LINKER SEQADV 9EBX SER A 423 UNP O24911 LINKER SEQADV 9EBX HIS A 424 UNP O24911 LINKER SEQADV 9EBX SER A 425 UNP O24911 LINKER SEQADV 9EBX THR A 430 UNP P42212 MET 153 CONFLICT SEQADV 9EBX ALA A 440 UNP P42212 VAL 163 CONFLICT SEQADV 9EBX GLY A 452 UNP P42212 SER 175 CONFLICT SEQADV 9EBX LYS A 483 UNP P42212 ALA 206 CONFLICT SEQADV 9EBX LEU A 508 UNP P42212 HIS 231 CONFLICT SEQADV 9EBX GLN A 515 UNP P42212 LYS 238 CONFLICT SEQRES 1 A 515 MET LYS HIS HIS HIS HIS HIS HIS HIS VAL SER LYS GLY SEQRES 2 A 515 GLU GLU LEU PHE THR GLY VAL VAL PRO ILE LEU VAL GLU SEQRES 3 A 515 LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SER VAL SER SEQRES 4 A 515 GLY GLU GLY GLU GLY ASP ALA THR TYR GLY LYS LEU THR SEQRES 5 A 515 LEU LYS PHE ILE CYS THR THR GLY LYS LEU PRO VAL PRO SEQRES 6 A 515 TRP PRO THR LEU VAL THR THR LEU SWG VAL GLN CYS PHE SEQRES 7 A 515 ALA ARG TYR PRO ASP HIS MET LYS GLN HIS ASP PHE PHE SEQRES 8 A 515 LYS SER ALA MET PRO GLU GLY TYR VAL GLN GLU ARG THR SEQRES 9 A 515 ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS THR ARG ALA SEQRES 10 A 515 GLU VAL LYS PHE GLU GLY ASP THR LEU VAL ASN ARG ILE SEQRES 11 A 515 GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP GLY ASN ILE SEQRES 12 A 515 LEU GLY HIS LYS LEU GLU TYR ASN SER SER GLY ARG THR SEQRES 13 A 515 GLY ILE ASP PRO PHE THR GLU SER VAL LEU GLN SER GLN SEQRES 14 A 515 ALA THR GLU LEU LEU GLN LYS LYS ALA GLN LEU VAL SER SEQRES 15 A 515 PHE LYS ILE GLN GLY ILE MET LYS ARG ILE PHE MET GLY SEQRES 16 A 515 ALA ASN THR LEU GLU LYS PHE LEU SER ASP GLU ASN SER SEQRES 17 A 515 ALA ILE ASN ASP THR LEU LYS ARG ARG MET LEU SER GLU SEQRES 18 A 515 PHE LEU LEU ALA ASN PRO HIS VAL LEU LEU VAL SER ALA SEQRES 19 A 515 ILE TYR THR ASN ASN ASN GLU ARG VAL ILE THR ALA MET SEQRES 20 A 515 SER MET ASP SER LYS ILE ALA TYR PRO ASN THR THR LEU SEQRES 21 A 515 ASN GLU ASN MET THR ASN GLN ILE ARG SER LEU LYS SER SEQRES 22 A 515 ILE THR HIS SER ASP PRO TYR TYR LYS GLU VAL ASN GLY SEQRES 23 A 515 ASP LYS ILE TYR GLY MET ASP ILE THR LEU PRO LEU MET SEQRES 24 A 515 GLY LYS ASN GLN ASN ALA ILE GLY ALA LEU ASN PHE PHE SEQRES 25 A 515 LEU ASN ILE ASP ALA PHE TYR THR ASP VAL VAL GLY LYS SEQRES 26 A 515 LYS LYS SER ASN THR PHE LEU MET GLY LYS ASP GLY ARG SEQRES 27 A 515 LEU LEU ILE ASN PRO ASN ARG GLU ILE GLN ASP LYS ILE SEQRES 28 A 515 LEU SER ALA ILE ASN PRO ASP ARG ARG VAL ALA LYS ALA SEQRES 29 A 515 VAL GLU TYR TYR ASN GLN ASN GLU ALA GLY THR LEU SER SEQRES 30 A 515 TYR HIS SER LEU SER GLY ASN THR GLU THR PHE LEU ALA SEQRES 31 A 515 ILE GLN PRO PHE ASP PHE PHE GLU GLU LYS GLY ASN ASN SEQRES 32 A 515 GLY ASN HIS TRP ARG TRP ALA ILE GLY LYS TYR VAL ASN SEQRES 33 A 515 LYS SER LEU VAL PHE SER SER HIS SER ASN VAL TYR ILE SEQRES 34 A 515 THR ALA ASP LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE SEQRES 35 A 515 LYS ILE ARG HIS ASN ILE GLU ASP GLY GLY VAL GLN LEU SEQRES 36 A 515 ALA ASP HIS TYR GLN GLN ASN THR PRO ILE GLY ASP GLY SEQRES 37 A 515 PRO VAL LEU LEU PRO ASP ASN HIS TYR LEU SER THR GLN SEQRES 38 A 515 SER LYS LEU SER LYS ASP PRO ASN GLU LYS ARG ASP HIS SEQRES 39 A 515 MET VAL LEU LEU GLU PHE VAL THR ALA ALA GLY ILE THR SEQRES 40 A 515 LEU GLY MET ASP GLU LEU TYR GLN MODRES 9EBX SWG A 74 SER CHROMOPHORE MODRES 9EBX SWG A 74 TYR CHROMOPHORE MODRES 9EBX SWG A 74 GLY CHROMOPHORE HET SWG A 74 23 HETNAM SWG 2-[(4Z)-2-[(1R)-1-AMINO-2-HYDROXY-ETHYL]-4-(1H-INDOL-3- HETNAM 2 SWG YLMETHYLIDENE)-5-OXO-IMIDAZOL-1-YL]ETHANOIC ACID FORMUL 1 SWG C16 H16 N4 O4 FORMUL 2 HOH *9(H2 O) HELIX 1 AA1 PRO A 65 VAL A 70 5 6 HELIX 2 AA2 PHE A 90 ALA A 94 1 5 HELIX 3 AA3 LEU A 166 SER A 204 1 39 HELIX 4 AA4 ASN A 211 ASN A 226 1 16 HELIX 5 AA5 ASN A 263 LEU A 271 1 9 HELIX 6 AA6 PHE A 318 VAL A 323 1 6 HELIX 7 AA7 LYS A 335 GLY A 337 5 3 HELIX 8 AA8 ASN A 344 GLN A 348 5 5 HELIX 9 AA9 ILE A 351 ASN A 356 1 6 HELIX 10 AB1 ASP A 358 VAL A 361 5 4 HELIX 11 AB2 ALA A 362 ASN A 371 1 10 SHEET 1 AA113 THR A 502 ALA A 504 0 SHEET 2 AA113 ASN A 475 SER A 485 -1 N TYR A 477 O ALA A 504 SHEET 3 AA113 HIS A 494 PHE A 500 -1 O PHE A 500 N GLN A 481 SHEET 4 AA113 LYS A 50 CYS A 57 -1 N PHE A 55 O MET A 495 SHEET 5 AA113 HIS A 34 ASP A 45 -1 N ASP A 45 O LYS A 50 SHEET 6 AA113 VAL A 20 VAL A 31 -1 N ILE A 23 O GLY A 42 SHEET 7 AA113 THR A 125 ILE A 135 1 O ILE A 130 N GLU A 26 SHEET 8 AA113 ASN A 112 GLU A 122 -1 N LYS A 114 O LYS A 133 SHEET 9 AA113 GLY A 98 PHE A 107 -1 N ARG A 103 O THR A 115 SHEET 10 AA113 VAL A 453 PRO A 464 -1 O THR A 463 N VAL A 100 SHEET 11 AA113 ILE A 438 ASN A 447 -1 N HIS A 446 O GLN A 454 SHEET 12 AA113 SER A 423 ALA A 431 -1 N THR A 430 O LYS A 439 SHEET 13 AA113 ASN A 475 SER A 485 -1 O HIS A 476 N ILE A 429 SHEET 1 AA2 6 ILE A 253 ALA A 254 0 SHEET 2 AA2 6 ARG A 242 SER A 248 -1 N MET A 247 O ALA A 254 SHEET 3 AA2 6 VAL A 229 TYR A 236 -1 N TYR A 236 O ARG A 242 SHEET 4 AA2 6 GLY A 307 ASN A 314 -1 O ALA A 308 N ILE A 235 SHEET 5 AA2 6 ASP A 287 LEU A 298 -1 N LEU A 296 O LEU A 309 SHEET 6 AA2 6 THR A 275 HIS A 276 -1 N THR A 275 O THR A 295 SHEET 1 AA3 6 ILE A 253 ALA A 254 0 SHEET 2 AA3 6 ARG A 242 SER A 248 -1 N MET A 247 O ALA A 254 SHEET 3 AA3 6 VAL A 229 TYR A 236 -1 N TYR A 236 O ARG A 242 SHEET 4 AA3 6 GLY A 307 ASN A 314 -1 O ALA A 308 N ILE A 235 SHEET 5 AA3 6 ASP A 287 LEU A 298 -1 N LEU A 296 O LEU A 309 SHEET 6 AA3 6 TYR A 280 VAL A 284 -1 N LYS A 282 O ILE A 289 SHEET 1 AA4 5 LEU A 339 ILE A 341 0 SHEET 2 AA4 5 THR A 330 MET A 333 -1 N LEU A 332 O ILE A 341 SHEET 3 AA4 5 ARG A 408 LYS A 417 -1 O ALA A 410 N MET A 333 SHEET 4 AA4 5 GLU A 386 ASP A 395 -1 N GLU A 386 O LYS A 417 SHEET 5 AA4 5 GLY A 374 HIS A 379 -1 N LEU A 376 O LEU A 389 LINK C LEU A 73 N1 SWG A 74 1555 1555 1.33 LINK C3 SWG A 74 N VAL A 75 1555 1555 1.34 CRYST1 34.350 57.980 67.319 97.82 91.43 104.24 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029112 0.007388 0.001831 0.00000 SCALE2 0.000000 0.017794 0.002640 0.00000 SCALE3 0.000000 0.000000 0.015022 0.00000 HETATM 420 CD2 SWG A 74 -2.244 3.092 1.804 1.00 59.04 C HETATM 421 CE3 SWG A 74 -2.798 3.402 3.051 1.00 67.02 C HETATM 422 CZ3 SWG A 74 -4.158 3.306 3.248 1.00 61.26 C HETATM 423 CH2 SWG A 74 -4.949 2.901 2.209 1.00 59.05 C HETATM 424 CZ2 SWG A 74 -4.447 2.578 0.946 1.00 61.96 C HETATM 425 CE2 SWG A 74 -3.078 2.684 0.776 1.00 62.95 C HETATM 426 NE1 SWG A 74 -2.330 2.428 -0.367 1.00 59.91 N HETATM 427 CD1 SWG A 74 -1.026 2.678 -0.028 1.00 60.85 C HETATM 428 CG SWG A 74 -0.882 3.085 1.262 1.00 60.53 C HETATM 429 CB2 SWG A 74 0.354 3.456 2.015 1.00 59.82 C HETATM 430 CA2 SWG A 74 1.599 3.291 1.470 1.00 59.19 C HETATM 431 N2 SWG A 74 1.866 2.909 0.187 1.00 62.08 N HETATM 432 C2 SWG A 74 2.887 3.481 2.116 1.00 65.83 C HETATM 433 O2 SWG A 74 3.135 3.826 3.272 1.00 74.93 O HETATM 434 N3 SWG A 74 3.805 3.201 1.172 1.00 65.02 N HETATM 435 CA3 SWG A 74 5.223 3.207 1.268 1.00 66.52 C HETATM 436 C3 SWG A 74 6.135 4.326 1.705 1.00 65.51 C HETATM 437 O3 SWG A 74 6.992 3.798 2.408 1.00 73.62 O HETATM 438 C1 SWG A 74 3.200 2.856 0.066 1.00 59.65 C HETATM 439 CA1 SWG A 74 3.887 2.492 -1.201 1.00 60.11 C HETATM 440 N1 SWG A 74 4.154 1.069 -1.135 1.00 42.55 N HETATM 441 CB1 SWG A 74 3.035 2.783 -2.433 1.00 46.74 C HETATM 442 OG1 SWG A 74 2.849 4.202 -2.468 1.00 55.77 O TER 3518 GLY A 505 HETATM 3519 O HOH A 601 -3.223 -17.887 2.667 1.00 60.49 O HETATM 3520 O HOH A 602 1.108 -4.247 2.339 1.00 52.72 O HETATM 3521 O HOH A 603 5.562 5.906 4.421 1.00 64.56 O HETATM 3522 O HOH A 604 7.370 -22.289 1.462 1.00 78.62 O HETATM 3523 O HOH A 605 -19.873 42.628 -31.280 1.00 55.27 O HETATM 3524 O HOH A 606 2.176 30.109 -25.410 1.00 63.74 O HETATM 3525 O HOH A 607 -4.413 35.411 -26.466 1.00 38.27 O HETATM 3526 O HOH A 608 2.152 6.173 0.379 1.00 84.49 O HETATM 3527 H1 HOH A 608 2.310 6.173 -0.575 1.00101.39 H HETATM 3528 H2 HOH A 608 3.019 6.173 0.806 1.00101.39 H HETATM 3529 O HOH A 609 0.923 18.759 -38.923 1.00 82.91 O CONECT 414 440 CONECT 420 421 425 428 CONECT 421 420 422 CONECT 422 421 423 CONECT 423 422 424 CONECT 424 423 425 CONECT 425 420 424 426 CONECT 426 425 427 CONECT 427 426 428 CONECT 428 420 427 429 CONECT 429 428 430 CONECT 430 429 431 432 CONECT 431 430 438 CONECT 432 430 433 434 CONECT 433 432 CONECT 434 432 435 438 CONECT 435 434 436 CONECT 436 435 437 443 CONECT 437 436 CONECT 438 431 434 439 CONECT 439 438 440 441 CONECT 440 414 439 CONECT 441 439 442 CONECT 442 441 CONECT 443 436 MASTER 395 0 1 11 30 0 0 6 3526 1 25 40 END