HEADER HYDROLASE 27-MAR-24 9EU4 TITLE GH29A ALPHA-L-FUCOSIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXPORTED ALPHA-L-FUCOSIDASE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 817; SOURCE 4 GENE: BF9343_3156; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS GH29A, GH29, FUCOSIDASE, FUCOSE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.YANG,B.ZEUNER,J.P.MORTH REVDAT 1 05-MAR-25 9EU4 0 JRNL AUTH Y.YANG,J.HOLCK,A.T.THORHALLSSON,C.J.HUNT,H.YANG,J.P.MORTH, JRNL AUTH 2 A.S.MEYER,B.ZEUNER JRNL TITL STRUCTURAL ELUCIDATION AND CHARACTERIZATION OF GH29A JRNL TITL 2 ALPHA-L-FUCOSIDASES AND THE EFFECT OF PH ON THEIR JRNL TITL 3 TRANSGLYCOSYLATION. JRNL REF FEBS J. V. 292 653 2025 JRNL REFN ISSN 1742-464X JRNL PMID 39658312 JRNL DOI 10.1111/FEBS.17347 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 68 352 2012 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX. REMARK 1 REF ACTA CRYSTALLOGR D STRUCT V. 75 861 2019 REMARK 1 REF 2 BIOL REMARK 1 REFN ISSN 2059-7983 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 53121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 2600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 70.1900 - 6.2200 1.00 2859 142 0.1564 0.1741 REMARK 3 2 6.2100 - 4.9300 1.00 2752 151 0.1517 0.2176 REMARK 3 3 4.9300 - 4.3100 1.00 2728 159 0.1299 0.1763 REMARK 3 4 4.3100 - 3.9200 1.00 2710 148 0.1464 0.1770 REMARK 3 5 3.9200 - 3.6400 1.00 2717 135 0.1764 0.2289 REMARK 3 6 3.6400 - 3.4200 1.00 2718 132 0.2098 0.2587 REMARK 3 7 3.4200 - 3.2500 1.00 2678 141 0.2179 0.2722 REMARK 3 8 3.2500 - 3.1100 1.00 2705 148 0.2505 0.2994 REMARK 3 9 3.1100 - 2.9900 1.00 2694 136 0.2834 0.3565 REMARK 3 10 2.9900 - 2.8900 1.00 2688 139 0.3274 0.4340 REMARK 3 11 2.8900 - 2.8000 1.00 2702 138 0.3043 0.3415 REMARK 3 12 2.8000 - 2.7200 1.00 2715 125 0.2694 0.3204 REMARK 3 13 2.7200 - 2.6400 1.00 2652 140 0.2851 0.2796 REMARK 3 14 2.6400 - 2.5800 1.00 2688 145 0.2863 0.3307 REMARK 3 15 2.5800 - 2.5200 1.00 2699 110 0.3312 0.3222 REMARK 3 16 2.5200 - 2.4700 1.00 2686 134 0.3554 0.3861 REMARK 3 17 2.4700 - 2.4200 1.00 2655 134 0.3689 0.3787 REMARK 3 18 2.4200 - 2.3700 0.96 2616 140 0.4076 0.4361 REMARK 3 19 2.3700 - 2.3300 0.70 1859 103 0.4376 0.4300 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.491 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.723 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 91.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6880 REMARK 3 ANGLE : 0.969 9341 REMARK 3 CHIRALITY : 0.054 977 REMARK 3 PLANARITY : 0.008 1196 REMARK 3 DIHEDRAL : 5.600 893 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1180 55.1727 27.9805 REMARK 3 T TENSOR REMARK 3 T11: 1.0905 T22: 0.7481 REMARK 3 T33: 0.7434 T12: 0.0887 REMARK 3 T13: -0.2785 T23: -0.1535 REMARK 3 L TENSOR REMARK 3 L11: 2.5667 L22: 3.5619 REMARK 3 L33: 0.8522 L12: 1.4347 REMARK 3 L13: 0.3687 L23: -0.5049 REMARK 3 S TENSOR REMARK 3 S11: -0.1462 S12: -0.0638 S13: 0.3767 REMARK 3 S21: -0.8970 S22: 0.1136 S23: 0.9121 REMARK 3 S31: 0.2676 S32: -0.1075 S33: 0.0007 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 282 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2457 35.2373 37.0405 REMARK 3 T TENSOR REMARK 3 T11: 1.0076 T22: 0.7278 REMARK 3 T33: 0.7481 T12: 0.0974 REMARK 3 T13: -0.0911 T23: -0.1256 REMARK 3 L TENSOR REMARK 3 L11: 0.7945 L22: 1.4849 REMARK 3 L33: 1.4587 L12: 0.1426 REMARK 3 L13: -0.8555 L23: -1.0328 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.0992 S13: -0.2942 REMARK 3 S21: -0.6354 S22: -0.1354 S23: 0.1274 REMARK 3 S31: 0.2539 S32: 0.1658 S33: 0.0004 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 435 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8413 17.2131 45.2916 REMARK 3 T TENSOR REMARK 3 T11: 0.9657 T22: 0.7743 REMARK 3 T33: 1.2768 T12: -0.0301 REMARK 3 T13: -0.1645 T23: -0.0847 REMARK 3 L TENSOR REMARK 3 L11: 0.5822 L22: 0.8928 REMARK 3 L33: 1.2246 L12: 0.6088 REMARK 3 L13: -0.5714 L23: -0.1834 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: 0.0079 S13: -0.6885 REMARK 3 S21: -0.3365 S22: -0.0906 S23: 0.2220 REMARK 3 S31: 0.5040 S32: -0.2648 S33: -0.0017 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3869 57.0943 5.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.8174 T22: 0.8585 REMARK 3 T33: 0.8084 T12: -0.2155 REMARK 3 T13: -0.3269 T23: 0.1415 REMARK 3 L TENSOR REMARK 3 L11: 2.0806 L22: 3.1826 REMARK 3 L33: 1.6866 L12: -0.5028 REMARK 3 L13: -0.3377 L23: -0.2534 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: -0.3586 S13: 0.0517 REMARK 3 S21: 0.6685 S22: -0.2700 S23: -0.7944 REMARK 3 S31: -0.2288 S32: 0.2585 S33: -0.0021 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 163 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8043 58.1940 -5.6108 REMARK 3 T TENSOR REMARK 3 T11: 0.6724 T22: 1.0088 REMARK 3 T33: 1.2647 T12: -0.1475 REMARK 3 T13: -0.1867 T23: 0.2545 REMARK 3 L TENSOR REMARK 3 L11: 2.5582 L22: 2.7320 REMARK 3 L33: 1.8612 L12: -0.2625 REMARK 3 L13: -0.6770 L23: -0.6109 REMARK 3 S TENSOR REMARK 3 S11: 0.0798 S12: 0.0814 S13: 0.0582 REMARK 3 S21: -0.1451 S22: -0.2808 S23: -1.2489 REMARK 3 S31: -0.0185 S32: 0.3034 S33: -0.0078 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 282 THROUGH 434 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1512 28.6921 -3.6783 REMARK 3 T TENSOR REMARK 3 T11: 0.6930 T22: 0.7526 REMARK 3 T33: 1.0238 T12: -0.0117 REMARK 3 T13: 0.0618 T23: 0.2632 REMARK 3 L TENSOR REMARK 3 L11: 0.0325 L22: 2.2704 REMARK 3 L33: 1.8727 L12: 0.1441 REMARK 3 L13: -0.1061 L23: 0.9227 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: -0.2430 S13: -0.4183 REMARK 3 S21: 0.2610 S22: -0.4028 S23: -0.4074 REMARK 3 S31: 0.2013 S32: 0.2765 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EU4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54083 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 70.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 20.70 REMARK 200 R MERGE (I) : 0.10370 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.4 REMARK 200 DATA REDUNDANCY IN SHELL : 21.30 REMARK 200 R MERGE FOR SHELL (I) : 1.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M AMMONIUM SULPHATE 0.1M BIS-TRIS REMARK 280 PH 8.0 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.80667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.90333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.90333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.80667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 GLN A 21 REMARK 465 GLN A 22 REMARK 465 GLU A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 HIS A 440 REMARK 465 HIS A 441 REMARK 465 HIS A 442 REMARK 465 MET B 20 REMARK 465 GLN B 21 REMARK 465 GLN B 22 REMARK 465 ASP B 435 REMARK 465 GLU B 436 REMARK 465 HIS B 437 REMARK 465 HIS B 438 REMARK 465 HIS B 439 REMARK 465 HIS B 440 REMARK 465 HIS B 441 REMARK 465 HIS B 442 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 683 O HOH A 707 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 404 CG PRO A 404 CD -0.209 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 41 -31.96 75.33 REMARK 500 TYR A 79 79.74 -156.24 REMARK 500 HIS A 106 -163.20 -102.82 REMARK 500 ASP A 131 88.26 -64.45 REMARK 500 ASN A 262 46.41 -149.85 REMARK 500 ASN A 283 -138.12 -95.15 REMARK 500 ASN A 378 82.69 -159.53 REMARK 500 VAL A 389 -68.28 -91.27 REMARK 500 LYS A 402 23.81 82.97 REMARK 500 LYS B 41 -35.67 73.45 REMARK 500 ARG B 105 111.34 -176.39 REMARK 500 ASN B 262 43.06 -144.98 REMARK 500 ASN B 283 -136.36 -96.52 REMARK 500 ILE B 349 -59.82 -127.55 REMARK 500 ASN B 378 78.27 -162.53 REMARK 500 VAL B 389 -73.30 -103.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 9EU4 A 21 434 UNP Q5LAD6 Q5LAD6_BACFN 21 434 DBREF 9EU4 B 21 434 UNP Q5LAD6 Q5LAD6_BACFN 21 434 SEQADV 9EU4 MET A 20 UNP Q5LAD6 INITIATING METHIONINE SEQADV 9EU4 ASP A 435 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 GLU A 436 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 437 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 438 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 439 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 440 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 441 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS A 442 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 MET B 20 UNP Q5LAD6 INITIATING METHIONINE SEQADV 9EU4 ASP B 435 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 GLU B 436 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 437 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 438 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 439 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 440 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 441 UNP Q5LAD6 EXPRESSION TAG SEQADV 9EU4 HIS B 442 UNP Q5LAD6 EXPRESSION TAG SEQRES 1 A 423 MET GLN GLN LYS TYR GLN PRO THR GLU ALA ASN LEU LYS SEQRES 2 A 423 ALA ARG SER GLU PHE GLN ASP ASN LYS PHE GLY ILE PHE SEQRES 3 A 423 LEU HIS TRP GLY LEU TYR ALA MET LEU ALA THR GLY GLU SEQRES 4 A 423 TRP THR MET THR ASN ASN ASN LEU ASN TYR LYS GLU TYR SEQRES 5 A 423 ALA LYS LEU ALA GLY GLY PHE TYR PRO SER LYS PHE ASP SEQRES 6 A 423 ALA ASP LYS TRP VAL ALA ALA ILE LYS ALA SER GLY ALA SEQRES 7 A 423 LYS TYR ILE CYS PHE THR THR ARG HIS HIS GLU GLY PHE SEQRES 8 A 423 SER MET PHE ASP THR LYS TYR SER ASP TYR ASN ILE VAL SEQRES 9 A 423 LYS ALA THR PRO PHE LYS ARG ASP VAL VAL LYS GLU LEU SEQRES 10 A 423 ALA ASP ALA CYS ALA LYS HIS GLY ILE LYS LEU HIS PHE SEQRES 11 A 423 TYR TYR SER HIS ILE ASP TRP TYR ARG GLU ASP ALA PRO SEQRES 12 A 423 GLN GLY ARG THR GLY ARG ARG THR GLY ARG PRO ASN PRO SEQRES 13 A 423 LYS GLY ASP TRP LYS SER TYR TYR GLN PHE MET ASN ASN SEQRES 14 A 423 GLN LEU THR GLU LEU LEU THR ASN TYR GLY PRO ILE GLY SEQRES 15 A 423 ALA ILE TRP PHE ASP GLY TRP TRP ASP GLN ASP ILE ASN SEQRES 16 A 423 PRO ASP PHE ASP TRP GLU LEU PRO GLU GLN TYR ALA LEU SEQRES 17 A 423 ILE HIS ARG LEU GLN PRO ALA CYS LEU VAL GLY ASN ASN SEQRES 18 A 423 HIS HIS GLN THR PRO PHE ALA GLY GLU ASP ILE GLN ILE SEQRES 19 A 423 PHE GLU ARG ASP LEU PRO GLY GLU ASN THR ALA GLY LEU SEQRES 20 A 423 SER GLY GLN SER VAL SER HIS LEU PRO LEU GLU THR CYS SEQRES 21 A 423 GLU THR MET ASN GLY MET TRP GLY TYR LYS ILE THR ASP SEQRES 22 A 423 GLN ASN TYR LYS SER THR LYS THR LEU ILE HIS TYR LEU SEQRES 23 A 423 VAL LYS ALA ALA GLY LYS ASP ALA ASN LEU LEU MET ASN SEQRES 24 A 423 ILE GLY PRO GLN PRO ASP GLY GLU LEU PRO GLU VAL ALA SEQRES 25 A 423 VAL GLN ARG LEU LYS GLU VAL GLY GLU TRP MET SER LYS SEQRES 26 A 423 TYR GLY GLU THR ILE TYR GLY THR ARG GLY GLY LEU VAL SEQRES 27 A 423 ALA PRO HIS ASP TRP GLY VAL THR THR GLN LYS GLY ASN SEQRES 28 A 423 LYS LEU TYR VAL HIS ILE LEU ASN LEU GLN ASP LYS ALA SEQRES 29 A 423 LEU PHE LEU PRO ILE VAL ASP LYS LYS VAL LYS LYS ALA SEQRES 30 A 423 VAL VAL PHE ALA ASP LYS THR PRO VAL ARG PHE THR LYS SEQRES 31 A 423 ASN LYS GLU GLY ILE VAL LEU GLU LEU ALA LYS VAL PRO SEQRES 32 A 423 THR ASP VAL ASP TYR VAL VAL GLU LEU THR ILE ASP ASP SEQRES 33 A 423 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 423 MET GLN GLN LYS TYR GLN PRO THR GLU ALA ASN LEU LYS SEQRES 2 B 423 ALA ARG SER GLU PHE GLN ASP ASN LYS PHE GLY ILE PHE SEQRES 3 B 423 LEU HIS TRP GLY LEU TYR ALA MET LEU ALA THR GLY GLU SEQRES 4 B 423 TRP THR MET THR ASN ASN ASN LEU ASN TYR LYS GLU TYR SEQRES 5 B 423 ALA LYS LEU ALA GLY GLY PHE TYR PRO SER LYS PHE ASP SEQRES 6 B 423 ALA ASP LYS TRP VAL ALA ALA ILE LYS ALA SER GLY ALA SEQRES 7 B 423 LYS TYR ILE CYS PHE THR THR ARG HIS HIS GLU GLY PHE SEQRES 8 B 423 SER MET PHE ASP THR LYS TYR SER ASP TYR ASN ILE VAL SEQRES 9 B 423 LYS ALA THR PRO PHE LYS ARG ASP VAL VAL LYS GLU LEU SEQRES 10 B 423 ALA ASP ALA CYS ALA LYS HIS GLY ILE LYS LEU HIS PHE SEQRES 11 B 423 TYR TYR SER HIS ILE ASP TRP TYR ARG GLU ASP ALA PRO SEQRES 12 B 423 GLN GLY ARG THR GLY ARG ARG THR GLY ARG PRO ASN PRO SEQRES 13 B 423 LYS GLY ASP TRP LYS SER TYR TYR GLN PHE MET ASN ASN SEQRES 14 B 423 GLN LEU THR GLU LEU LEU THR ASN TYR GLY PRO ILE GLY SEQRES 15 B 423 ALA ILE TRP PHE ASP GLY TRP TRP ASP GLN ASP ILE ASN SEQRES 16 B 423 PRO ASP PHE ASP TRP GLU LEU PRO GLU GLN TYR ALA LEU SEQRES 17 B 423 ILE HIS ARG LEU GLN PRO ALA CYS LEU VAL GLY ASN ASN SEQRES 18 B 423 HIS HIS GLN THR PRO PHE ALA GLY GLU ASP ILE GLN ILE SEQRES 19 B 423 PHE GLU ARG ASP LEU PRO GLY GLU ASN THR ALA GLY LEU SEQRES 20 B 423 SER GLY GLN SER VAL SER HIS LEU PRO LEU GLU THR CYS SEQRES 21 B 423 GLU THR MET ASN GLY MET TRP GLY TYR LYS ILE THR ASP SEQRES 22 B 423 GLN ASN TYR LYS SER THR LYS THR LEU ILE HIS TYR LEU SEQRES 23 B 423 VAL LYS ALA ALA GLY LYS ASP ALA ASN LEU LEU MET ASN SEQRES 24 B 423 ILE GLY PRO GLN PRO ASP GLY GLU LEU PRO GLU VAL ALA SEQRES 25 B 423 VAL GLN ARG LEU LYS GLU VAL GLY GLU TRP MET SER LYS SEQRES 26 B 423 TYR GLY GLU THR ILE TYR GLY THR ARG GLY GLY LEU VAL SEQRES 27 B 423 ALA PRO HIS ASP TRP GLY VAL THR THR GLN LYS GLY ASN SEQRES 28 B 423 LYS LEU TYR VAL HIS ILE LEU ASN LEU GLN ASP LYS ALA SEQRES 29 B 423 LEU PHE LEU PRO ILE VAL ASP LYS LYS VAL LYS LYS ALA SEQRES 30 B 423 VAL VAL PHE ALA ASP LYS THR PRO VAL ARG PHE THR LYS SEQRES 31 B 423 ASN LYS GLU GLY ILE VAL LEU GLU LEU ALA LYS VAL PRO SEQRES 32 B 423 THR ASP VAL ASP TYR VAL VAL GLU LEU THR ILE ASP ASP SEQRES 33 B 423 GLU HIS HIS HIS HIS HIS HIS HET FUL A 501 11 HET SO4 A 502 5 HET FUL B 501 11 HET SO4 B 502 5 HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 3 FUL 2(C6 H12 O5) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *202(H2 O) HELIX 1 AA1 THR A 27 LYS A 41 1 15 HELIX 2 AA2 LEU A 50 ALA A 55 1 6 HELIX 3 AA3 TRP A 59 ASN A 64 1 6 HELIX 4 AA4 ASN A 67 LYS A 73 1 7 HELIX 5 AA5 LEU A 74 PHE A 78 5 5 HELIX 6 AA6 ASP A 84 ALA A 94 1 11 HELIX 7 AA7 ASN A 121 THR A 126 1 6 HELIX 8 AA8 ASP A 131 GLY A 144 1 14 HELIX 9 AA9 ASP A 178 TYR A 197 1 20 HELIX 10 AB1 TRP A 208 ASP A 212 5 5 HELIX 11 AB2 GLU A 220 GLN A 232 1 13 HELIX 12 AB3 SER A 297 LYS A 311 1 15 HELIX 13 AB4 PRO A 328 GLY A 346 1 19 HELIX 14 AB5 GLU A 347 ILE A 349 5 3 HELIX 15 AB6 THR B 27 LYS B 41 1 15 HELIX 16 AB7 LEU B 50 ALA B 55 1 6 HELIX 17 AB8 TRP B 59 ASN B 64 1 6 HELIX 18 AB9 ASN B 67 LYS B 73 1 7 HELIX 19 AC1 LEU B 74 PHE B 78 5 5 HELIX 20 AC2 ASP B 84 ALA B 94 1 11 HELIX 21 AC3 ASP B 131 GLY B 144 1 14 HELIX 22 AC4 ASP B 178 LEU B 194 1 17 HELIX 23 AC5 TRP B 208 ASP B 212 5 5 HELIX 24 AC6 GLU B 220 GLN B 232 1 13 HELIX 25 AC7 SER B 297 GLY B 310 1 14 HELIX 26 AC8 PRO B 328 GLY B 346 1 19 HELIX 27 AC9 GLU B 347 ILE B 349 5 3 SHEET 1 AA1 8 LEU A 236 ASN A 240 0 SHEET 2 AA1 8 ALA A 202 ASP A 206 1 N PHE A 205 O GLY A 238 SHEET 3 AA1 8 LYS A 146 SER A 152 1 N PHE A 149 O TRP A 204 SHEET 4 AA1 8 TYR A 99 ARG A 105 1 N ILE A 100 O HIS A 148 SHEET 5 AA1 8 PHE A 42 LEU A 46 1 N LEU A 46 O CYS A 101 SHEET 6 AA1 8 ALA A 313 ILE A 319 1 O ILE A 319 N PHE A 45 SHEET 7 AA1 8 LEU A 276 THR A 281 1 N THR A 278 O LEU A 316 SHEET 8 AA1 8 GLN A 252 GLU A 255 1 N PHE A 254 O GLU A 277 SHEET 1 AA2 5 ARG A 353 GLY A 354 0 SHEET 2 AA2 5 GLY A 363 LYS A 368 -1 O GLN A 367 N ARG A 353 SHEET 3 AA2 5 LYS A 371 ILE A 376 -1 O HIS A 375 N VAL A 364 SHEET 4 AA2 5 TYR A 427 ILE A 433 -1 O VAL A 429 N VAL A 374 SHEET 5 AA2 5 VAL A 393 VAL A 398 -1 N VAL A 397 O GLU A 430 SHEET 1 AA3 3 ALA A 383 LEU A 386 0 SHEET 2 AA3 3 GLY A 413 GLU A 417 -1 O LEU A 416 N LEU A 384 SHEET 3 AA3 3 ARG A 406 ASN A 410 -1 N ASN A 410 O GLY A 413 SHEET 1 AA4 8 LEU B 236 ASN B 240 0 SHEET 2 AA4 8 ALA B 202 ASP B 206 1 N PHE B 205 O GLY B 238 SHEET 3 AA4 8 LYS B 146 SER B 152 1 N PHE B 149 O TRP B 204 SHEET 4 AA4 8 TYR B 99 ARG B 105 1 N PHE B 102 O TYR B 150 SHEET 5 AA4 8 PHE B 42 LEU B 46 1 N LEU B 46 O CYS B 101 SHEET 6 AA4 8 ALA B 313 ILE B 319 1 O LEU B 315 N GLY B 43 SHEET 7 AA4 8 LEU B 276 THR B 281 1 N THR B 278 O ASN B 314 SHEET 8 AA4 8 GLN B 252 GLU B 255 1 N PHE B 254 O GLU B 277 SHEET 1 AA5 5 ARG B 353 GLY B 354 0 SHEET 2 AA5 5 GLY B 363 LYS B 368 -1 O GLN B 367 N ARG B 353 SHEET 3 AA5 5 LYS B 371 ILE B 376 -1 O TYR B 373 N THR B 366 SHEET 4 AA5 5 TYR B 427 ILE B 433 -1 O VAL B 429 N VAL B 374 SHEET 5 AA5 5 VAL B 393 VAL B 398 -1 N LYS B 394 O THR B 432 SHEET 1 AA6 3 ALA B 383 LEU B 386 0 SHEET 2 AA6 3 GLY B 413 GLU B 417 -1 O LEU B 416 N LEU B 384 SHEET 3 AA6 3 ARG B 406 ASN B 410 -1 N ARG B 406 O GLU B 417 CRYST1 140.372 140.372 110.710 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007124 0.004113 0.000000 0.00000 SCALE2 0.000000 0.008226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009033 0.00000