HEADER SIGNALING PROTEIN 13-APR-24 9EZO TITLE CANONICAL CLASS 2 STRUCTURE OF THE HUMAN CORTACTIN SH3 DOMAIN IN TITLE 2 COMPLEX WITH WIP-DERIVED PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDNA FLJ34459 FIS, CLONE HLUNG2002916, HIGHLY SIMILAR TO COMPND 3 SRC SUBSTRATE CORTACTIN; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: WAS/WASL-INTERACTING PROTEIN FAMILY MEMBER 1; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: PROTEIN PRPL-2,WISKOTT-ALDRICH SYNDROME PROTEIN-INTERACTING COMPND 10 PROTEIN,WASP-INTERACTING PROTEIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: T7EXPRESS; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-28-A(+); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS SH3 DOMAIN, CORTACTIN, WASP-INTERACTING PROTEIN (WIP), CYTOSKELETAL KEYWDS 2 REGULATION, CORTACTIN-WIP COMPLEX, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 19 AUTHOR C.G.SOKOLIK,J.H.CHILL REVDAT 2 26-FEB-25 9EZO 1 JRNL REVDAT 1 19-FEB-25 9EZO 0 JRNL AUTH C.G.SOKOLIK,J.H.CHILL JRNL TITL A TRIPLE-POSE COMPLEX BETWEEN AN EXTENDED WIP MOTIF AND A JRNL TITL 2 C-TERMINAL SH3 DOMAIN MODULATES CORTACTIN ACTIVITY. JRNL REF J.MOL.BIOL. V. 437 68984 2025 JRNL REFN ESSN 1089-8638 JRNL PMID 39914658 JRNL DOI 10.1016/J.JMB.2025.168984 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-24. REMARK 100 THE DEPOSITION ID IS D_1292136951. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.6 REMARK 210 IONIC STRENGTH : 0.055 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.7 MM HUMAN WIP (165-183), 20 REMARK 210 MM POTASSIUM PHOSPHATE, 20 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 93% H2O/7% D2O; 0.7 MM REMARK 210 HUMAN WIP (165-183), 20 MM REMARK 210 POTASSIUM PHOSPHATE, 20 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 100% D2O; 0.22 MM [U-99% REMARK 210 15N; U-80% 2H] HUMAN CORTACTIN REMARK 210 SH3 DOMAIN (494-550), 1.1 MM REMARK 210 HUMAN WIP (165-183), 20 MM REMARK 210 POTASSIUM PHOSPHATE, 20 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 1 MM DITHIOTHREITOL, 93% REMARK 210 H2O/7% D2O; 0.22 MM [U-99% 15N; REMARK 210 U-80% 2H] HUMAN CORTACTIN SH3 REMARK 210 DOMAIN (494-550), 1.1 MM HUMAN REMARK 210 WIP (165-183), 20 MM POTASSIUM REMARK 210 PHOSPHATE, 20 MM SODIUM CHLORIDE, REMARK 210 0.02 % SODIUM AZIDE, 1 MM REMARK 210 DITHIOTHREITOL, 100% D2O; 0.22 REMARK 210 MM [U-99% 13C; U-99% 15N] HUMAN REMARK 210 CORTACTIN SH3 DOMAIN (494-550), REMARK 210 1.1 MM HUMAN WIP (165-183), 20 REMARK 210 MM POTASSIUM PHOSPHATE, 20 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 1 MM DITHIOTHREITOL, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-15N HSQC; 2D 1H-1H COSY; REMARK 210 3D 13C-FILTERED-12C-EDITED NOESY- REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.6.4, CNS 1.3, TALOS+ REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 40 98.85 -69.90 REMARK 500 1 PRO A 65 104.70 -59.94 REMARK 500 2 ALA A 29 38.86 -96.58 REMARK 500 2 PRO A 65 104.81 -59.88 REMARK 500 3 ALA A 29 36.97 -97.13 REMARK 500 3 ASN A 44 39.92 70.39 REMARK 500 3 PRO A 65 104.73 -59.97 REMARK 500 3 ARG B 168 115.54 -161.96 REMARK 500 4 ALA A 29 57.60 -91.20 REMARK 500 4 PRO A 65 104.48 -59.66 REMARK 500 5 ASP A 40 98.81 -69.54 REMARK 500 5 PRO A 65 104.76 -59.93 REMARK 500 6 ALA A 29 46.74 -93.48 REMARK 500 6 ASP A 40 99.13 -69.41 REMARK 500 6 PRO A 65 104.65 -59.69 REMARK 500 7 ALA A 29 35.94 -97.50 REMARK 500 7 PRO A 65 104.78 -59.90 REMARK 500 8 ALA A 29 39.40 -96.41 REMARK 500 8 ASN A 44 45.29 70.87 REMARK 500 8 PRO A 65 104.70 -59.88 REMARK 500 9 ALA A 29 30.58 -98.05 REMARK 500 10 PRO A 65 104.66 -59.88 REMARK 500 11 ALA A 29 40.32 -95.99 REMARK 500 11 ASN A 44 34.60 70.93 REMARK 500 11 PRO A 65 104.77 -59.86 REMARK 500 12 ALA A 29 38.16 -97.26 REMARK 500 12 ASP A 40 98.58 -68.39 REMARK 500 12 PRO A 65 104.63 -59.77 REMARK 500 13 ALA A 29 30.99 -97.78 REMARK 500 13 ASN A 44 38.97 70.97 REMARK 500 15 ASN A 44 32.94 70.80 REMARK 500 15 PRO A 65 104.74 -60.00 REMARK 500 16 ALA A 29 30.31 -98.01 REMARK 500 16 ASP A 40 99.87 -69.67 REMARK 500 16 ASN A 44 33.01 70.98 REMARK 500 16 PRO A 65 104.82 -59.94 REMARK 500 17 ALA A 29 41.00 -96.06 REMARK 500 17 ASP A 40 98.37 -65.45 REMARK 500 18 ALA A 29 42.46 -95.66 REMARK 500 18 PRO A 65 104.67 -59.72 REMARK 500 19 ALA A 29 31.34 -98.43 REMARK 500 19 PRO A 65 104.63 -59.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 51799 RELATED DB: BMRB REMARK 900 RELATED ID: 9EZN RELATED DB: PDB REMARK 900 CANONICAL CLASS 1 STRUCTURE OF THE HUMAN CORTACTIN SH3 DOMAIN IN REMARK 900 COMPLEX WITH WIP-DERIVED PEPTIDE REMARK 900 RELATED ID: 9EZP RELATED DB: PDB REMARK 900 NON-CANONICAL STRUCTURE OF THE HUMAN CORTACTIN SH3 DOMAIN IN REMARK 900 COMPLEX WITH WIP-DERIVED PEPTIDE DBREF 9EZO A 17 73 UNP B3KRK4 B3KRK4_HUMAN 178 234 DBREF 9EZO B 165 183 UNP O43516 WIPF1_HUMAN 165 183 SEQRES 1 A 57 GLY ILE THR ALA VAL ALA LEU TYR ASP TYR GLN ALA ALA SEQRES 2 A 57 GLY ASP ASP GLU ILE SER PHE ASP PRO ASP ASP ILE ILE SEQRES 3 A 57 THR ASN ILE GLU MET ILE ASP ASP GLY TRP TRP ARG GLY SEQRES 4 A 57 VAL CYS LYS GLY ARG TYR GLY LEU PHE PRO ALA ASN TYR SEQRES 5 A 57 VAL GLU LEU ARG GLN SEQRES 1 B 19 GLN ARG ASN ARG MET PRO PRO PRO ARG PRO ASP VAL GLY SEQRES 2 B 19 SER LYS PRO ASP SER ILE SHEET 1 AA1 5 TYR A 61 PRO A 65 0 SHEET 2 AA1 5 TRP A 52 VAL A 56 -1 N GLY A 55 O GLY A 62 SHEET 3 AA1 5 ILE A 42 GLU A 46 -1 N THR A 43 O VAL A 56 SHEET 4 AA1 5 THR A 19 ALA A 22 -1 N ALA A 20 O ILE A 42 SHEET 5 AA1 5 VAL A 69 LEU A 71 -1 O GLU A 70 N VAL A 21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 2 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 3 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 4 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 5 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 6 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 7 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 8 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 9 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 10 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 11 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 12 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 13 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 14 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 15 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 16 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 17 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 18 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MODEL 19 TER 879 GLN A 73 TER 1183 ILE B 183 ENDMDL MASTER 162 0 0 0 5 0 0 6 606 2 0 7 END