HEADER IMMUNE SYSTEM 19-APR-24 9F1I TITLE CRYSTAL STRUCTURE OF A FIRST-IN-CLASS ANTIBODY FOR ALPHA-1,6- TITLE 2 FUCOSYLATED PROSTATE-SPECIFIC ANTIGEN, TARGET BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY CHAIN RABBIT FAB; COMPND 3 CHAIN: H, I; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIGHT CHAIN RABBIT FAB; COMPND 7 CHAIN: L, M; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PROSTATE SPECIFIC ANTIGEN; COMPND 11 CHAIN: P, Q; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_TAXID: 9986; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PUC18; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 10 ORGANISM_TAXID: 9986; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PUC18; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS ANTIBODY, FAB, PROSTATE-SPECIFIC ANTIGEN, PSA, FUCOSYLATION, KEYWDS 2 DIAGNOSTIC ASSAY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.HALLDORSSON REVDAT 1 31-JUL-24 9F1I 0 JRNL AUTH S.HALLDORSSON,L.HILLRINGHAUS,C.HOJER,A.MURANYI,M.SCHRAEML, JRNL AUTH 2 M.S.LANGE,G.TABARES JRNL TITL DEVELOPMENT OF A FIRST-IN-CLASS ANTIBODY AND A SPECIFIC JRNL TITL 2 ASSAY FOR ALPHA-1,6-FUCOSYLATED PROSTATE-SPECIFIC ANTIGEN. JRNL REF SCI REP V. 14 16512 2024 JRNL REFN ESSN 2045-2322 JRNL PMID 39020051 JRNL DOI 10.1038/S41598-024-67545-1 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.4 REMARK 3 NUMBER OF REFLECTIONS : 155639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 7799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2000 - 4.2800 1.00 6588 351 0.1331 0.1532 REMARK 3 2 4.2800 - 3.4000 1.00 6342 360 0.1442 0.1657 REMARK 3 3 3.4000 - 2.9700 1.00 6320 334 0.1639 0.1699 REMARK 3 4 2.9700 - 2.7000 1.00 6263 317 0.1725 0.1973 REMARK 3 5 2.7000 - 2.5100 1.00 6248 350 0.1649 0.1972 REMARK 3 6 2.5100 - 2.3600 1.00 6193 348 0.1636 0.1903 REMARK 3 7 2.3600 - 2.2400 1.00 6221 351 0.1496 0.1916 REMARK 3 8 2.2400 - 2.1400 1.00 6189 333 0.1469 0.1901 REMARK 3 9 2.1400 - 2.0600 1.00 6204 323 0.1475 0.2032 REMARK 3 10 2.0600 - 1.9900 1.00 6201 328 0.1434 0.1651 REMARK 3 11 1.9900 - 1.9300 1.00 6231 315 0.1468 0.1967 REMARK 3 12 1.9300 - 1.8700 1.00 6214 314 0.1444 0.1902 REMARK 3 13 1.8700 - 1.8200 1.00 6173 319 0.1460 0.2028 REMARK 3 14 1.8200 - 1.7800 1.00 6158 319 0.1534 0.2127 REMARK 3 15 1.7800 - 1.7400 1.00 6215 315 0.1681 0.2434 REMARK 3 16 1.7400 - 1.7000 1.00 6131 361 0.1725 0.2387 REMARK 3 17 1.7000 - 1.6700 1.00 6165 328 0.1686 0.2128 REMARK 3 18 1.6700 - 1.6400 1.00 6205 307 0.1703 0.2256 REMARK 3 19 1.6400 - 1.6100 0.99 6085 310 0.1870 0.2098 REMARK 3 20 1.6100 - 1.5800 0.91 5580 284 0.1869 0.2404 REMARK 3 21 1.5800 - 1.5500 0.78 4760 282 0.1828 0.2258 REMARK 3 22 1.5500 - 1.5300 0.70 4316 223 0.1916 0.2525 REMARK 3 23 1.5300 - 1.5100 0.65 3992 213 0.1952 0.2946 REMARK 3 24 1.5100 - 1.4900 0.60 3772 170 0.1927 0.2867 REMARK 3 25 1.4900 - 1.4700 0.47 2917 141 0.2092 0.2623 REMARK 3 26 1.4700 - 1.4500 0.26 1599 66 0.2098 0.2445 REMARK 3 27 1.4500 - 1.4300 0.16 1021 48 0.2196 0.3049 REMARK 3 28 1.4300 - 1.4100 0.12 739 39 0.2146 0.2616 REMARK 3 29 1.4100 - 1.3900 0.08 513 34 0.2139 0.2181 REMARK 3 30 1.3900 - 1.3800 0.05 285 16 0.2313 0.3820 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.144 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.473 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6862 REMARK 3 ANGLE : 0.767 9377 REMARK 3 CHIRALITY : 0.076 1121 REMARK 3 PLANARITY : 0.005 1182 REMARK 3 DIHEDRAL : 12.361 2425 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F1I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-24. REMARK 100 THE DEPOSITION ID IS D_1292138003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 155757 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 52.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-HCL PH 8.5, 6.25% V/V PEG REMARK 280 3350, 6.25% V/V PEG 4000, 6.25% V/V PEG 2000 AND 6.25% V/V PEG REMARK 280 5000 MME, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.15500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.21350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.69750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.21350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.15500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.69750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, P, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, M, Q, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 225 REMARK 465 LYS H 226 REMARK 465 PRO H 227 REMARK 465 THR H 228 REMARK 465 CYS H 229 REMARK 465 PRO H 230 REMARK 465 SER I 225 REMARK 465 LYS I 226 REMARK 465 PRO I 227 REMARK 465 THR I 228 REMARK 465 CYS I 229 REMARK 465 PRO I 230 REMARK 465 ASP M 1 REMARK 465 GLY P 76 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN M 143 O HOH M 401 2.15 REMARK 500 O HOH I 493 O HOH M 509 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE H 48 -60.21 -106.98 REMARK 500 ILE I 48 -61.90 -105.57 REMARK 500 SER I 222 146.48 79.53 REMARK 500 ALA L 51 -39.19 74.10 REMARK 500 LYS L 144 72.47 56.19 REMARK 500 ALA M 51 -40.16 73.54 REMARK 500 ASP M 98 50.91 -94.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH I 581 DISTANCE = 5.83 ANGSTROMS DBREF 9F1I H 1 230 PDB 9F1I 9F1I 1 230 DBREF 9F1I I 1 230 PDB 9F1I 9F1I 1 230 DBREF 9F1I L 1 217 PDB 9F1I 9F1I 1 217 DBREF 9F1I M 1 217 PDB 9F1I 9F1I 1 217 DBREF 9F1I P 67 76 UNP Q8NCW4 Q8NCW4_HUMAN 67 76 DBREF 9F1I Q 67 76 UNP Q8NCW4 Q8NCW4_HUMAN 67 76 SEQRES 1 H 230 PCA SER LEU GLU GLU SER GLY GLY ASP LEU VAL LYS PRO SEQRES 2 H 230 GLY ALA SER LEU THR LEU THR CYS THR ALA SER GLY PHE SEQRES 3 H 230 SER PHE SER ALA GLY TYR ASP MET CYS TRP VAL ARG GLN SEQRES 4 H 230 ALA PRO GLY LYS GLY LEU GLU TRP ILE ALA CYS ILE TYR SEQRES 5 H 230 ALA ASP GLY SER GLY SER THR TYR TYR ALA ASN TRP ALA SEQRES 6 H 230 LYS GLY ARG PHE THR ILE SER LEU ALA SER SER THR THR SEQRES 7 H 230 VAL THR LEU GLN MET THR GLY LEU THR ALA ALA ASP THR SEQRES 8 H 230 ALA THR TYR PHE CYS ALA ARG GLU GLY ALA ASP GLY PRO SEQRES 9 H 230 ASP TYR GLY TYR ALA ALA PHE SER LEU TRP GLY PRO GLY SEQRES 10 H 230 THR LEU VAL THR VAL SER SER GLY GLN PRO LYS ALA PRO SEQRES 11 H 230 SER VAL PHE PRO LEU ALA PRO CYS CYS GLY ASP THR PRO SEQRES 12 H 230 SER SER THR VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 H 230 LEU PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY THR SEQRES 14 H 230 LEU THR ASN GLY VAL ARG THR PHE PRO SER VAL ARG GLN SEQRES 15 H 230 SER SER GLY LEU TYR SER LEU SER SER VAL VAL SER VAL SEQRES 16 H 230 THR SER SER SER GLN PRO VAL THR CYS ASN VAL ALA HIS SEQRES 17 H 230 PRO ALA THR ASN THR LYS VAL ASP LYS THR VAL ALA PRO SEQRES 18 H 230 SER THR CYS SER LYS PRO THR CYS PRO SEQRES 1 I 230 PCA SER LEU GLU GLU SER GLY GLY ASP LEU VAL LYS PRO SEQRES 2 I 230 GLY ALA SER LEU THR LEU THR CYS THR ALA SER GLY PHE SEQRES 3 I 230 SER PHE SER ALA GLY TYR ASP MET CYS TRP VAL ARG GLN SEQRES 4 I 230 ALA PRO GLY LYS GLY LEU GLU TRP ILE ALA CYS ILE TYR SEQRES 5 I 230 ALA ASP GLY SER GLY SER THR TYR TYR ALA ASN TRP ALA SEQRES 6 I 230 LYS GLY ARG PHE THR ILE SER LEU ALA SER SER THR THR SEQRES 7 I 230 VAL THR LEU GLN MET THR GLY LEU THR ALA ALA ASP THR SEQRES 8 I 230 ALA THR TYR PHE CYS ALA ARG GLU GLY ALA ASP GLY PRO SEQRES 9 I 230 ASP TYR GLY TYR ALA ALA PHE SER LEU TRP GLY PRO GLY SEQRES 10 I 230 THR LEU VAL THR VAL SER SER GLY GLN PRO LYS ALA PRO SEQRES 11 I 230 SER VAL PHE PRO LEU ALA PRO CYS CYS GLY ASP THR PRO SEQRES 12 I 230 SER SER THR VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 I 230 LEU PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY THR SEQRES 14 I 230 LEU THR ASN GLY VAL ARG THR PHE PRO SER VAL ARG GLN SEQRES 15 I 230 SER SER GLY LEU TYR SER LEU SER SER VAL VAL SER VAL SEQRES 16 I 230 THR SER SER SER GLN PRO VAL THR CYS ASN VAL ALA HIS SEQRES 17 I 230 PRO ALA THR ASN THR LYS VAL ASP LYS THR VAL ALA PRO SEQRES 18 I 230 SER THR CYS SER LYS PRO THR CYS PRO SEQRES 1 L 217 ASP VAL VAL MET THR GLN THR PRO ALA SER VAL GLU ALA SEQRES 2 L 217 ALA VAL GLY GLY THR VAL THR ILE LYS CYS GLN ALA SER SEQRES 3 L 217 GLN SER ILE SER ASN TYR PHE SER TRP TYR GLN GLN LYS SEQRES 4 L 217 PRO GLY GLN PRO PRO LYS LEU LEU ILE TYR LYS ALA SER SEQRES 5 L 217 THR LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 L 217 GLY SER GLY THR GLU PHE THR LEU THR ILE SER ASP LEU SEQRES 7 L 217 GLU CYS ALA ASP ALA ALA THR TYR TYR CYS GLN SER PHE SEQRES 8 L 217 TYR GLY SER VAL THR SER ASP TYR GLY GLY PHE ALA PHE SEQRES 9 L 217 GLY GLY GLY THR GLU VAL VAL VAL LYS GLY ASP PRO VAL SEQRES 10 L 217 ALA PRO THR VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN SEQRES 11 L 217 VAL ALA THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN SEQRES 12 L 217 LYS TYR PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP SEQRES 13 L 217 GLY THR THR GLN THR THR GLY ILE GLU ASN SER LYS THR SEQRES 14 L 217 PRO GLN ASN SER ALA ASP CYS THR TYR ASN LEU SER SER SEQRES 15 L 217 THR LEU THR LEU THR SER THR GLN TYR ASN SER HIS LYS SEQRES 16 L 217 GLU TYR THR CYS LYS VAL THR GLN GLY THR THR SER VAL SEQRES 17 L 217 VAL GLN SER PHE ASN ARG GLY ASP CYS SEQRES 1 M 217 ASP VAL VAL MET THR GLN THR PRO ALA SER VAL GLU ALA SEQRES 2 M 217 ALA VAL GLY GLY THR VAL THR ILE LYS CYS GLN ALA SER SEQRES 3 M 217 GLN SER ILE SER ASN TYR PHE SER TRP TYR GLN GLN LYS SEQRES 4 M 217 PRO GLY GLN PRO PRO LYS LEU LEU ILE TYR LYS ALA SER SEQRES 5 M 217 THR LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 M 217 GLY SER GLY THR GLU PHE THR LEU THR ILE SER ASP LEU SEQRES 7 M 217 GLU CYS ALA ASP ALA ALA THR TYR TYR CYS GLN SER PHE SEQRES 8 M 217 TYR GLY SER VAL THR SER ASP TYR GLY GLY PHE ALA PHE SEQRES 9 M 217 GLY GLY GLY THR GLU VAL VAL VAL LYS GLY ASP PRO VAL SEQRES 10 M 217 ALA PRO THR VAL LEU ILE PHE PRO PRO ALA ALA ASP GLN SEQRES 11 M 217 VAL ALA THR GLY THR VAL THR ILE VAL CYS VAL ALA ASN SEQRES 12 M 217 LYS TYR PHE PRO ASP VAL THR VAL THR TRP GLU VAL ASP SEQRES 13 M 217 GLY THR THR GLN THR THR GLY ILE GLU ASN SER LYS THR SEQRES 14 M 217 PRO GLN ASN SER ALA ASP CYS THR TYR ASN LEU SER SER SEQRES 15 M 217 THR LEU THR LEU THR SER THR GLN TYR ASN SER HIS LYS SEQRES 16 M 217 GLU TYR THR CYS LYS VAL THR GLN GLY THR THR SER VAL SEQRES 17 M 217 VAL GLN SER PHE ASN ARG GLY ASP CYS SEQRES 1 P 10 ILE ARG ASN LYS SER VAL ILE LEU LEU GLY SEQRES 1 Q 10 ILE ARG ASN LYS SER VAL ILE LEU LEU GLY HET PCA H 1 8 HET PCA I 1 8 HET NAG A 1 14 HET FUC A 2 10 HET NAG C 1 14 HET FUC C 2 10 HET EDO H 301 4 HET EDO I 301 4 HET EDO L 301 4 HET EDO L 302 4 HET EDO L 303 4 HET EDO M 301 4 HET PFX P 101 10 HET PFX Q 101 10 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM PFX 2-[2-(2-AZANYLETHOXY)ETHOXY]ETHANOIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 7 FUC 2(C6 H12 O5) FORMUL 9 EDO 6(C2 H6 O2) FORMUL 15 PFX 2(C6 H13 N O4) FORMUL 17 HOH *795(H2 O) HELIX 1 AA1 ASN H 63 LYS H 66 5 4 HELIX 2 AA2 THR H 87 THR H 91 5 5 HELIX 3 AA3 SER H 167 THR H 169 5 3 HELIX 4 AA4 PRO H 209 ASN H 212 5 4 HELIX 5 AA5 ASN I 63 LYS I 66 5 4 HELIX 6 AA6 THR I 87 THR I 91 5 5 HELIX 7 AA7 SER I 167 THR I 169 5 3 HELIX 8 AA8 PRO I 209 ASN I 212 5 4 HELIX 9 AA9 GLU L 79 ALA L 83 5 5 HELIX 10 AB1 GLN L 130 THR L 133 5 4 HELIX 11 AB2 SER L 188 SER L 193 1 6 HELIX 12 AB3 GLY L 215 CYS L 217 5 3 HELIX 13 AB4 GLU M 79 ALA M 83 5 5 HELIX 14 AB5 GLN M 130 THR M 133 5 4 HELIX 15 AB6 SER M 188 SER M 193 1 6 HELIX 16 AB7 GLY M 215 CYS M 217 5 3 HELIX 17 AB8 ARG P 68 LEU P 75 1 8 HELIX 18 AB9 ARG Q 68 GLY Q 76 1 9 SHEET 1 AA1 4 SER H 2 SER H 6 0 SHEET 2 AA1 4 LEU H 17 SER H 24 -1 O SER H 24 N SER H 2 SHEET 3 AA1 4 THR H 78 MET H 83 -1 O VAL H 79 N CYS H 21 SHEET 4 AA1 4 PHE H 69 SER H 75 -1 N THR H 70 O GLN H 82 SHEET 1 AA2 6 LEU H 10 VAL H 11 0 SHEET 2 AA2 6 THR H 118 VAL H 122 1 O THR H 121 N VAL H 11 SHEET 3 AA2 6 ALA H 92 GLU H 99 -1 N TYR H 94 O THR H 118 SHEET 4 AA2 6 ASP H 33 GLN H 39 -1 N VAL H 37 O PHE H 95 SHEET 5 AA2 6 LEU H 45 TYR H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 59 TYR H 61 -1 O TYR H 60 N CYS H 50 SHEET 1 AA3 4 LEU H 10 VAL H 11 0 SHEET 2 AA3 4 THR H 118 VAL H 122 1 O THR H 121 N VAL H 11 SHEET 3 AA3 4 ALA H 92 GLU H 99 -1 N TYR H 94 O THR H 118 SHEET 4 AA3 4 PHE H 111 TRP H 114 -1 O LEU H 113 N ARG H 98 SHEET 1 AA4 4 SER H 131 LEU H 135 0 SHEET 2 AA4 4 THR H 146 TYR H 156 -1 O LYS H 154 N SER H 131 SHEET 3 AA4 4 TYR H 187 THR H 196 -1 O LEU H 189 N VAL H 153 SHEET 4 AA4 4 VAL H 174 THR H 176 -1 N ARG H 175 O VAL H 192 SHEET 1 AA5 4 SER H 131 LEU H 135 0 SHEET 2 AA5 4 THR H 146 TYR H 156 -1 O LYS H 154 N SER H 131 SHEET 3 AA5 4 TYR H 187 THR H 196 -1 O LEU H 189 N VAL H 153 SHEET 4 AA5 4 VAL H 180 ARG H 181 -1 N VAL H 180 O SER H 188 SHEET 1 AA6 3 THR H 162 TRP H 165 0 SHEET 2 AA6 3 VAL H 202 HIS H 208 -1 O ASN H 205 N THR H 164 SHEET 3 AA6 3 THR H 213 VAL H 219 -1 O VAL H 215 N VAL H 206 SHEET 1 AA7 4 SER I 2 SER I 6 0 SHEET 2 AA7 4 LEU I 17 SER I 24 -1 O THR I 22 N GLU I 4 SHEET 3 AA7 4 THR I 78 MET I 83 -1 O VAL I 79 N CYS I 21 SHEET 4 AA7 4 PHE I 69 SER I 75 -1 N THR I 70 O GLN I 82 SHEET 1 AA8 6 LEU I 10 VAL I 11 0 SHEET 2 AA8 6 THR I 118 VAL I 122 1 O THR I 121 N VAL I 11 SHEET 3 AA8 6 ALA I 92 GLU I 99 -1 N TYR I 94 O THR I 118 SHEET 4 AA8 6 ASP I 33 GLN I 39 -1 N VAL I 37 O PHE I 95 SHEET 5 AA8 6 LEU I 45 TYR I 52 -1 O GLU I 46 N ARG I 38 SHEET 6 AA8 6 THR I 59 TYR I 61 -1 O TYR I 60 N CYS I 50 SHEET 1 AA9 4 LEU I 10 VAL I 11 0 SHEET 2 AA9 4 THR I 118 VAL I 122 1 O THR I 121 N VAL I 11 SHEET 3 AA9 4 ALA I 92 GLU I 99 -1 N TYR I 94 O THR I 118 SHEET 4 AA9 4 PHE I 111 TRP I 114 -1 O LEU I 113 N ARG I 98 SHEET 1 AB1 4 SER I 131 LEU I 135 0 SHEET 2 AB1 4 THR I 146 TYR I 156 -1 O LYS I 154 N SER I 131 SHEET 3 AB1 4 TYR I 187 THR I 196 -1 O LEU I 189 N VAL I 153 SHEET 4 AB1 4 VAL I 174 THR I 176 -1 N ARG I 175 O VAL I 192 SHEET 1 AB2 4 SER I 131 LEU I 135 0 SHEET 2 AB2 4 THR I 146 TYR I 156 -1 O LYS I 154 N SER I 131 SHEET 3 AB2 4 TYR I 187 THR I 196 -1 O LEU I 189 N VAL I 153 SHEET 4 AB2 4 VAL I 180 ARG I 181 -1 N VAL I 180 O SER I 188 SHEET 1 AB3 3 THR I 162 TRP I 165 0 SHEET 2 AB3 3 THR I 203 HIS I 208 -1 O ASN I 205 N THR I 164 SHEET 3 AB3 3 THR I 213 THR I 218 -1 O VAL I 215 N VAL I 206 SHEET 1 AB4 4 MET L 4 THR L 7 0 SHEET 2 AB4 4 VAL L 19 ALA L 25 -1 O GLN L 24 N THR L 5 SHEET 3 AB4 4 GLU L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AB4 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 AB5 6 SER L 10 ALA L 14 0 SHEET 2 AB5 6 THR L 108 LYS L 113 1 O VAL L 111 N VAL L 11 SHEET 3 AB5 6 ALA L 84 GLY L 93 -1 N ALA L 84 O VAL L 110 SHEET 4 AB5 6 PHE L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB5 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB5 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB6 4 SER L 10 ALA L 14 0 SHEET 2 AB6 4 THR L 108 LYS L 113 1 O VAL L 111 N VAL L 11 SHEET 3 AB6 4 ALA L 84 GLY L 93 -1 N ALA L 84 O VAL L 110 SHEET 4 AB6 4 GLY L 100 PHE L 104 -1 O ALA L 103 N SER L 90 SHEET 1 AB7 4 THR L 120 PHE L 124 0 SHEET 2 AB7 4 THR L 135 TYR L 145 -1 O ASN L 143 N THR L 120 SHEET 3 AB7 4 TYR L 178 THR L 187 -1 O SER L 182 N CYS L 140 SHEET 4 AB7 4 ILE L 164 LYS L 168 -1 N SER L 167 O SER L 181 SHEET 1 AB8 4 THR L 158 THR L 159 0 SHEET 2 AB8 4 THR L 150 VAL L 155 -1 N VAL L 155 O THR L 158 SHEET 3 AB8 4 GLU L 196 GLN L 203 -1 O LYS L 200 N THR L 152 SHEET 4 AB8 4 THR L 206 ASN L 213 -1 O THR L 206 N GLN L 203 SHEET 1 AB9 4 MET M 4 THR M 7 0 SHEET 2 AB9 4 VAL M 19 ALA M 25 -1 O GLN M 24 N THR M 5 SHEET 3 AB9 4 GLU M 70 ILE M 75 -1 O ILE M 75 N VAL M 19 SHEET 4 AB9 4 PHE M 62 SER M 67 -1 N LYS M 63 O THR M 74 SHEET 1 AC1 6 SER M 10 ALA M 14 0 SHEET 2 AC1 6 THR M 108 LYS M 113 1 O LYS M 113 N ALA M 13 SHEET 3 AC1 6 ALA M 84 GLY M 93 -1 N ALA M 84 O VAL M 110 SHEET 4 AC1 6 PHE M 33 GLN M 38 -1 N GLN M 38 O THR M 85 SHEET 5 AC1 6 LYS M 45 TYR M 49 -1 O LEU M 47 N TRP M 35 SHEET 6 AC1 6 THR M 53 LEU M 54 -1 O THR M 53 N TYR M 49 SHEET 1 AC2 4 SER M 10 ALA M 14 0 SHEET 2 AC2 4 THR M 108 LYS M 113 1 O LYS M 113 N ALA M 13 SHEET 3 AC2 4 ALA M 84 GLY M 93 -1 N ALA M 84 O VAL M 110 SHEET 4 AC2 4 GLY M 100 PHE M 104 -1 O ALA M 103 N SER M 90 SHEET 1 AC3 4 THR M 120 PHE M 124 0 SHEET 2 AC3 4 THR M 135 TYR M 145 -1 O VAL M 139 N PHE M 124 SHEET 3 AC3 4 TYR M 178 THR M 187 -1 O SER M 182 N CYS M 140 SHEET 4 AC3 4 ILE M 164 LYS M 168 -1 N SER M 167 O SER M 181 SHEET 1 AC4 4 THR M 158 THR M 159 0 SHEET 2 AC4 4 THR M 150 VAL M 155 -1 N VAL M 155 O THR M 158 SHEET 3 AC4 4 GLU M 196 GLN M 203 -1 O LYS M 200 N THR M 152 SHEET 4 AC4 4 THR M 206 ASN M 213 -1 O THR M 206 N GLN M 203 SSBOND 1 CYS H 21 CYS H 96 1555 1555 2.02 SSBOND 2 CYS H 35 CYS H 50 1555 1555 2.05 SSBOND 3 CYS H 138 CYS L 217 1555 1555 2.05 SSBOND 4 CYS H 139 CYS H 224 1555 1555 2.04 SSBOND 5 CYS H 151 CYS H 204 1555 1555 2.04 SSBOND 6 CYS I 21 CYS I 96 1555 1555 2.03 SSBOND 7 CYS I 34A CYS I 50 1555 1555 2.03 SSBOND 8 CYS I 138 CYS M 217 1555 1555 2.05 SSBOND 9 CYS I 139 CYS I 224 1555 1555 2.03 SSBOND 10 CYS I 151 CYS I 204 1555 1555 2.04 SSBOND 11 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 12 CYS L 80 CYS L 176 1555 1555 2.06 SSBOND 13 CYS L 140 CYS L 199 1555 1555 2.01 SSBOND 14 CYS M 23 CYS M 88 1555 1555 2.04 SSBOND 15 CYS M 80 CYS M 176 1555 1555 2.05 SSBOND 16 CYS M 140 CYS M 199 1555 1555 2.02 LINK C PCA H 1 N SER H 2 1555 1555 1.33 LINK C PCA I 1 N SER I 2 1555 1555 1.33 LINK N ILE P 67 C PFX P 101 1555 1555 1.43 LINK ND2 ASN P 69 C1 NAG A 1 1555 1555 1.44 LINK N ILE Q 67 C PFX Q 101 1555 1555 1.43 LINK ND2 ASN Q 69 C1 NAG C 1 1555 1555 1.44 LINK O6 NAG A 1 C1 FUC A 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 2 1555 1555 1.44 CISPEP 1 LEU H 157 PRO H 158 0 -6.17 CISPEP 2 GLU H 159 PRO H 160 0 1.28 CISPEP 3 LEU I 157 PRO I 158 0 -4.60 CISPEP 4 GLU I 159 PRO I 160 0 0.73 CISPEP 5 GLU I 159 PRO I 160 0 -0.08 CISPEP 6 GLN I 200 PRO I 201 0 -0.10 CISPEP 7 THR L 7 PRO L 8 0 -5.34 CISPEP 8 PHE L 146 PRO L 147 0 -0.09 CISPEP 9 THR M 7 PRO M 8 0 -7.97 CISPEP 10 PHE M 146 PRO M 147 0 3.39 CRYST1 72.310 87.395 150.427 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006648 0.00000 HETATM 1 N PCA H 1 25.222 -2.171 11.943 1.00 28.40 N ANISOU 1 N PCA H 1 4023 3827 2942 559 -594 -1444 N HETATM 2 CA PCA H 1 24.638 -3.361 11.355 1.00 26.33 C ANISOU 2 CA PCA H 1 3686 3695 2622 559 -703 -1456 C HETATM 3 CB PCA H 1 23.121 -3.212 11.347 1.00 27.81 C ANISOU 3 CB PCA H 1 4053 3769 2745 643 -483 -1545 C HETATM 4 CG PCA H 1 22.943 -1.734 11.679 1.00 30.14 C ANISOU 4 CG PCA H 1 4338 3984 3130 554 -340 -1455 C HETATM 5 CD PCA H 1 24.295 -1.215 12.160 1.00 30.87 C ANISOU 5 CD PCA H 1 4670 3814 3246 275 -232 -1604 C HETATM 6 OE PCA H 1 24.509 -0.115 12.648 1.00 33.80 O ANISOU 6 OE PCA H 1 5261 3928 3652 111 306 -1497 O HETATM 7 C PCA H 1 25.153 -3.577 9.939 1.00 22.81 C ANISOU 7 C PCA H 1 3056 3297 2314 406 -607 -1519 C HETATM 8 O PCA H 1 25.270 -2.632 9.163 1.00 24.14 O ANISOU 8 O PCA H 1 3509 3402 2262 284 -700 -1426 O