HEADER REPLICATION 01-MAY-24 9F6L TITLE HUMAN DNA POLYMERASE EPSILON BOUND TO T-C MISMATCHED DNA (MISMATCH TITLE 2 EXCISION STATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3'-5' EXODEOXYRIBONUCLEASE,DNA POLYMERASE II SUBUNIT A; COMPND 5 EC: 2.7.7.7,3.1.11.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA NASCENT STRAND; COMPND 9 CHAIN: P; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA TEMPLATE STRAND; COMPND 13 CHAIN: T; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLE, POLE1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS DNA, POLYMERASE, EPSILON, PCNA, LEADING STRAND, HUMAN, REPLICATION, KEYWDS 2 REPLISOME, PROOFREADING EXPDTA ELECTRON MICROSCOPY AUTHOR J.J.ROSKE,J.T.P.YEELES REVDAT 1 07-AUG-24 9F6L 0 JRNL AUTH J.J.ROSKE,J.T.P.YEELES JRNL TITL STRUCTURAL BASIS FOR PROCESSIVE DAUGHTER-STRAND SYNTHESIS JRNL TITL 2 AND PROOFREADING BY THE HUMAN LEADING-STRAND DNA POLYMERASE JRNL TITL 3 POL EPSILON. JRNL REF NAT.STRUCT.MOL.BIOL. 2024 JRNL REFN ESSN 1545-9985 JRNL DOI 10.1038/S41594-024-01370-Y REMARK 2 REMARK 2 RESOLUTION. 3.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.900 REMARK 3 NUMBER OF PARTICLES : 18858 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9F6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292137589. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : QUATERNARY COMPLEX OF HUMAN REMARK 245 LEADING STRAND POLYMERASE REMARK 245 EPSILON, PROLIFERATING CELL REMARK 245 NUCLEAR ANTIGEN (PCNA), REMARK 245 SUBSTRATE DNA AND INCOMING REMARK 245 NUCLEOTIDE.; DNA POLYMERASE REMARK 245 EPSILON CATALYTIC SUBUNIT A; DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3640.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 4 REMARK 465 SER A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 ARG A 8 REMARK 465 ARG A 9 REMARK 465 ARG A 10 REMARK 465 ALA A 11 REMARK 465 ASP A 12 REMARK 465 PRO A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 ARG A 21 REMARK 465 ASP A 22 REMARK 465 ASP A 23 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 THR A 26 REMARK 465 HIS A 182 REMARK 465 ALA A 183 REMARK 465 SER A 184 REMARK 465 ASP A 185 REMARK 465 ALA A 186 REMARK 465 TYR A 187 REMARK 465 THR A 188 REMARK 465 ALA A 189 REMARK 465 LEU A 190 REMARK 465 LEU A 191 REMARK 465 SER A 192 REMARK 465 SER A 193 REMARK 465 VAL A 194 REMARK 465 LEU A 195 REMARK 465 GLN A 196 REMARK 465 ARG A 197 REMARK 465 GLY A 198 REMARK 465 GLY A 199 REMARK 465 VAL A 200 REMARK 465 ILE A 201 REMARK 465 THR A 202 REMARK 465 ASP A 203 REMARK 465 GLU A 204 REMARK 465 GLU A 205 REMARK 465 GLU A 206 REMARK 465 THR A 207 REMARK 465 SER A 208 REMARK 465 LYS A 209 REMARK 465 LYS A 210 REMARK 465 ILE A 211 REMARK 465 ALA A 212 REMARK 465 ASP A 1176 REMARK 465 VAL A 1177 REMARK 465 TYR A 1178 REMARK 465 LYS A 1179 REMARK 465 GLN A 1180 REMARK 465 LYS A 1181 REMARK 465 LYS A 1182 REMARK 465 ILE A 1183 REMARK 465 SER A 1184 REMARK 465 GLU A 1185 REMARK 465 LEU A 1186 REMARK 465 PHE A 1187 REMARK 465 THR A 1188 REMARK 465 LEU A 1189 REMARK 465 GLU A 1190 REMARK 465 GLY A 1191 REMARK 465 ARG A 1192 REMARK 465 ARG A 1193 REMARK 465 GLN A 1194 REMARK 465 VAL A 1195 REMARK 465 THR A 1196 REMARK 465 MET A 1197 REMARK 465 ALA A 1198 REMARK 465 GLU A 1199 REMARK 465 ALA A 1200 REMARK 465 DT P 1 REMARK 465 DT P 2 REMARK 465 DT P 3 REMARK 465 DT P 4 REMARK 465 DT P 5 REMARK 465 DT P 6 REMARK 465 DT P 7 REMARK 465 DT P 8 REMARK 465 DA P 9 REMARK 465 DT P 10 REMARK 465 DC P 11 REMARK 465 DT P 12 REMARK 465 DG P 13 REMARK 465 DA P 14 REMARK 465 DA P 15 REMARK 465 DG P 16 REMARK 465 DT P 17 REMARK 465 DT T 1 REMARK 465 DT T 2 REMARK 465 DT T 3 REMARK 465 DT T 4 REMARK 465 DT T 5 REMARK 465 DT T 6 REMARK 465 DT T 7 REMARK 465 DT T 8 REMARK 465 DA T 9 REMARK 465 DA T 22 REMARK 465 DC T 23 REMARK 465 DT T 24 REMARK 465 DT T 25 REMARK 465 DC T 26 REMARK 465 DA T 27 REMARK 465 DG T 28 REMARK 465 DA T 29 REMARK 465 DT T 30 REMARK 465 DC T 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG T 14 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG T 15 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT T 17 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT T 18 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC T 19 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 143 14.43 59.74 REMARK 500 LEU A 283 13.97 59.60 REMARK 500 PRO A 441 -8.37 -57.79 REMARK 500 GLN A 451 64.82 -157.30 REMARK 500 PRO A 642 -7.46 -59.61 REMARK 500 SER A 828 117.29 -166.67 REMARK 500 LYS A 885 73.39 -150.23 REMARK 500 GLN A 909 32.28 -140.34 REMARK 500 PHE A 930 112.06 -160.12 REMARK 500 LEU A 968 107.87 -160.09 REMARK 500 ILE A1144 -54.87 -121.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 275 OD1 REMARK 620 2 ASP A 368 OD1 65.7 REMARK 620 3 ASP A 368 OD2 83.8 43.0 REMARK 620 4 DT P 30 O3' 150.1 120.1 121.3 REMARK 620 5 DC P 31 OP1 100.0 161.2 152.1 66.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 275 OD2 REMARK 620 2 GLU A 277 OE2 79.4 REMARK 620 3 ASP A 462 OD2 96.1 104.7 REMARK 620 4 DC P 31 OP1 92.2 152.9 101.7 REMARK 620 5 DC P 31 O5' 145.1 102.1 116.6 70.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 651 SG REMARK 620 2 SF4 A1301 S2 128.5 REMARK 620 3 SF4 A1301 S3 100.6 104.1 REMARK 620 4 SF4 A1301 S4 112.7 104.0 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 654 SG REMARK 620 2 SF4 A1301 S1 98.5 REMARK 620 3 SF4 A1301 S3 136.3 104.1 REMARK 620 4 SF4 A1301 S4 106.0 104.1 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1301 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 663 SG REMARK 620 2 SF4 A1301 S1 140.9 REMARK 620 3 SF4 A1301 S2 94.1 104.0 REMARK 620 4 SF4 A1301 S4 104.6 104.1 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1301 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 747 SG REMARK 620 2 SF4 A1301 S1 108.5 REMARK 620 3 SF4 A1301 S2 94.3 104.1 REMARK 620 4 SF4 A1301 S3 137.1 104.1 104.0 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-50228 RELATED DB: EMDB REMARK 900 HUMAN DNA POLYMERASE EPSILON BOUND TO T-C MISMATCHED DNA (MISMATCH REMARK 900 EXCISION STATE) DBREF 9F6L A 1 1200 UNP Q07864 DPOE1_HUMAN 1 1200 DBREF 9F6L P 1 31 PDB 9F6L 9F6L 1 31 DBREF 9F6L T 1 31 PDB 9F6L 9F6L 1 31 SEQRES 1 A 1200 MET SER LEU ARG SER GLY GLY ARG ARG ARG ALA ASP PRO SEQRES 2 A 1200 GLY ALA ASP GLY GLU ALA SER ARG ASP ASP GLY ALA THR SEQRES 3 A 1200 SER SER VAL SER ALA LEU LYS ARG LEU GLU ARG SER GLN SEQRES 4 A 1200 TRP THR ASP LYS MET ASP LEU ARG PHE GLY PHE GLU ARG SEQRES 5 A 1200 LEU LYS GLU PRO GLY GLU LYS THR GLY TRP LEU ILE ASN SEQRES 6 A 1200 MET HIS PRO THR GLU ILE LEU ASP GLU ASP LYS ARG LEU SEQRES 7 A 1200 GLY SER ALA VAL ASP TYR TYR PHE ILE GLN ASP ASP GLY SEQRES 8 A 1200 SER ARG PHE LYS VAL ALA LEU PRO TYR LYS PRO TYR PHE SEQRES 9 A 1200 TYR ILE ALA THR ARG LYS GLY CYS GLU ARG GLU VAL SER SEQRES 10 A 1200 SER PHE LEU SER LYS LYS PHE GLN GLY LYS ILE ALA LYS SEQRES 11 A 1200 VAL GLU THR VAL PRO LYS GLU ASP LEU ASP LEU PRO ASN SEQRES 12 A 1200 HIS LEU VAL GLY LEU LYS ARG ASN TYR ILE ARG LEU SER SEQRES 13 A 1200 PHE HIS THR VAL GLU ASP LEU VAL LYS VAL ARG LYS GLU SEQRES 14 A 1200 ILE SER PRO ALA VAL LYS LYS ASN ARG GLU GLN ASP HIS SEQRES 15 A 1200 ALA SER ASP ALA TYR THR ALA LEU LEU SER SER VAL LEU SEQRES 16 A 1200 GLN ARG GLY GLY VAL ILE THR ASP GLU GLU GLU THR SER SEQRES 17 A 1200 LYS LYS ILE ALA ASP GLN LEU ASP ASN ILE VAL ASP MET SEQRES 18 A 1200 ARG GLU TYR ASP VAL PRO TYR HIS ILE ARG LEU SER ILE SEQRES 19 A 1200 ASP LEU LYS ILE HIS VAL ALA HIS TRP TYR ASN VAL ARG SEQRES 20 A 1200 TYR ARG GLY ASN ALA PHE PRO VAL GLU ILE THR ARG ARG SEQRES 21 A 1200 ASP ASP LEU VAL GLU ARG PRO ASP PRO VAL VAL LEU ALA SEQRES 22 A 1200 PHE ASP ILE GLU THR THR LYS LEU PRO LEU LYS PHE PRO SEQRES 23 A 1200 ASP ALA GLU THR ASP GLN ILE MET MET ILE SER TYR MET SEQRES 24 A 1200 ILE ASP GLY GLN GLY TYR LEU ILE THR ASN ARG GLU ILE SEQRES 25 A 1200 VAL SER GLU ASP ILE GLU ASP PHE GLU PHE THR PRO LYS SEQRES 26 A 1200 PRO GLU TYR GLU GLY PRO PHE CYS VAL PHE ASN GLU PRO SEQRES 27 A 1200 ASP GLU ALA HIS LEU ILE GLN ARG TRP PHE GLU HIS VAL SEQRES 28 A 1200 GLN GLU THR LYS PRO THR ILE MET VAL THR TYR ASN GLY SEQRES 29 A 1200 ASP PHE PHE ASP TRP PRO PHE VAL GLU ALA ARG ALA ALA SEQRES 30 A 1200 VAL HIS GLY LEU SER MET GLN GLN GLU ILE GLY PHE GLN SEQRES 31 A 1200 LYS ASP SER GLN GLY GLU TYR LYS ALA PRO GLN CYS ILE SEQRES 32 A 1200 HIS MET ASP CYS LEU ARG TRP VAL LYS ARG ASP SER TYR SEQRES 33 A 1200 LEU PRO VAL GLY SER HIS ASN LEU LYS ALA ALA ALA LYS SEQRES 34 A 1200 ALA LYS LEU GLY TYR ASP PRO VAL GLU LEU ASP PRO GLU SEQRES 35 A 1200 ASP MET CYS ARG MET ALA THR GLU GLN PRO GLN THR LEU SEQRES 36 A 1200 ALA THR TYR SER VAL SER ASP ALA VAL ALA THR TYR TYR SEQRES 37 A 1200 LEU TYR MET LYS TYR VAL HIS PRO PHE ILE PHE ALA LEU SEQRES 38 A 1200 CYS THR ILE ILE PRO MET GLU PRO ASP GLU VAL LEU ARG SEQRES 39 A 1200 LYS GLY SER GLY THR LEU CYS GLU ALA LEU LEU MET VAL SEQRES 40 A 1200 GLN ALA PHE HIS ALA ASN ILE ILE PHE PRO ASN LYS GLN SEQRES 41 A 1200 GLU GLN GLU PHE ASN LYS LEU THR ASP ASP GLY HIS VAL SEQRES 42 A 1200 LEU ASP SER GLU THR TYR VAL GLY GLY HIS VAL GLU ALA SEQRES 43 A 1200 LEU GLU SER GLY VAL PHE ARG SER ASP ILE PRO CYS ARG SEQRES 44 A 1200 PHE ARG MET ASN PRO ALA ALA PHE ASP PHE LEU LEU GLN SEQRES 45 A 1200 ARG VAL GLU LYS THR LEU ARG HIS ALA LEU GLU GLU GLU SEQRES 46 A 1200 GLU LYS VAL PRO VAL GLU GLN VAL THR ASN PHE GLU GLU SEQRES 47 A 1200 VAL CYS ASP GLU ILE LYS SER LYS LEU ALA SER LEU LYS SEQRES 48 A 1200 ASP VAL PRO SER ARG ILE GLU CYS PRO LEU ILE TYR HIS SEQRES 49 A 1200 LEU ASP VAL GLY ALA MET TYR PRO ASN ILE ILE LEU THR SEQRES 50 A 1200 ASN ARG LEU GLN PRO SER ALA MET VAL ASP GLU ALA THR SEQRES 51 A 1200 CYS ALA ALA CYS ASP PHE ASN LYS PRO GLY ALA ASN CYS SEQRES 52 A 1200 GLN ARG LYS MET ALA TRP GLN TRP ARG GLY GLU PHE MET SEQRES 53 A 1200 PRO ALA SER ARG SER GLU TYR HIS ARG ILE GLN HIS GLN SEQRES 54 A 1200 LEU GLU SER GLU LYS PHE PRO PRO LEU PHE PRO GLU GLY SEQRES 55 A 1200 PRO ALA ARG ALA PHE HIS GLU LEU SER ARG GLU GLU GLN SEQRES 56 A 1200 ALA LYS TYR GLU LYS ARG ARG LEU ALA ASP TYR CYS ARG SEQRES 57 A 1200 LYS ALA TYR LYS LYS ILE HIS ILE THR LYS VAL GLU GLU SEQRES 58 A 1200 ARG LEU THR THR ILE CYS GLN ARG GLU ASN SER PHE TYR SEQRES 59 A 1200 VAL ASP THR VAL ARG ALA PHE ARG ASP ARG ARG TYR GLU SEQRES 60 A 1200 PHE LYS GLY LEU HIS LYS VAL TRP LYS LYS LYS LEU SER SEQRES 61 A 1200 ALA ALA VAL GLU VAL GLY ASP ALA ALA GLU VAL LYS ARG SEQRES 62 A 1200 CYS LYS ASN MET GLU VAL LEU TYR ASP SER LEU GLN LEU SEQRES 63 A 1200 ALA HIS LYS CYS ILE LEU ASN SER PHE TYR GLY TYR VAL SEQRES 64 A 1200 MET ARG LYS GLY ALA ARG TRP TYR SER MET GLU MET ALA SEQRES 65 A 1200 GLY ILE VAL CYS PHE THR GLY ALA ASN ILE ILE THR GLN SEQRES 66 A 1200 ALA ARG GLU LEU ILE GLU GLN ILE GLY ARG PRO LEU GLU SEQRES 67 A 1200 LEU ASP THR ASP GLY ILE TRP CYS VAL LEU PRO ASN SER SEQRES 68 A 1200 PHE PRO GLU ASN PHE VAL PHE LYS THR THR ASN VAL LYS SEQRES 69 A 1200 LYS PRO LYS VAL THR ILE SER TYR PRO GLY ALA MET LEU SEQRES 70 A 1200 ASN ILE MET VAL LYS GLU GLY PHE THR ASN ASP GLN TYR SEQRES 71 A 1200 GLN GLU LEU ALA GLU PRO SER SER LEU THR TYR VAL THR SEQRES 72 A 1200 ARG SER GLU ASN SER ILE PHE PHE GLU VAL ASP GLY PRO SEQRES 73 A 1200 TYR LEU ALA MET ILE LEU PRO ALA SER LYS GLU GLU GLY SEQRES 74 A 1200 LYS LYS LEU LYS LYS ARG TYR ALA VAL PHE ASN GLU ASP SEQRES 75 A 1200 GLY SER LEU ALA GLU LEU LYS GLY PHE GLU VAL LYS ARG SEQRES 76 A 1200 ARG GLY GLU LEU GLN LEU ILE LYS ILE PHE GLN SER SER SEQRES 77 A 1200 VAL PHE GLU ALA PHE LEU LYS GLY SER THR LEU GLU GLU SEQRES 78 A 1200 VAL TYR GLY SER VAL ALA LYS VAL ALA ASP TYR TRP LEU SEQRES 79 A 1200 ASP VAL LEU TYR SER LYS ALA ALA ASN MET PRO ASP SER SEQRES 80 A 1200 GLU LEU PHE GLU LEU ILE SER GLU ASN ARG SER MET SER SEQRES 81 A 1200 ARG LYS LEU GLU ASP TYR GLY GLU GLN LYS SER THR SER SEQRES 82 A 1200 ILE SER THR ALA LYS ARG LEU ALA GLU PHE LEU GLY ASP SEQRES 83 A 1200 GLN MET VAL LYS ASP ALA GLY LEU SER CYS ARG TYR ILE SEQRES 84 A 1200 ILE SER ARG LYS PRO GLU GLY SER PRO VAL THR GLU ARG SEQRES 85 A 1200 ALA ILE PRO LEU ALA ILE PHE GLN ALA GLU PRO THR VAL SEQRES 86 A 1200 ARG LYS HIS PHE LEU ARG LYS TRP LEU LYS SER SER SER SEQRES 87 A 1200 LEU GLN ASP PHE ASP ILE ARG ALA ILE LEU ASP TRP ASP SEQRES 88 A 1200 TYR TYR ILE GLU ARG LEU GLY SER ALA ILE GLN LYS ILE SEQRES 89 A 1200 ILE THR ILE PRO ALA ALA LEU GLN GLN VAL LYS ASN PRO SEQRES 90 A 1200 VAL PRO ARG VAL LYS HIS PRO ASP TRP LEU HIS LYS LYS SEQRES 91 A 1200 LEU LEU GLU LYS ASN ASP VAL TYR LYS GLN LYS LYS ILE SEQRES 92 A 1200 SER GLU LEU PHE THR LEU GLU GLY ARG ARG GLN VAL THR SEQRES 93 A 1200 MET ALA GLU ALA SEQRES 1 P 31 DT DT DT DT DT DT DT DT DA DT DC DT DG SEQRES 2 P 31 DA DA DG DT DT DC DG DA DA DT DC DC DT SEQRES 3 P 31 DG DG DA DT DC SEQRES 1 T 31 DT DT DT DT DT DT DT DT DA DT DC DC DA SEQRES 2 T 31 DG DG DA DT DT DC DG DA DA DC DT DT DC SEQRES 3 T 31 DA DG DA DT DC HET SF4 A1301 8 HET CA A1302 1 HET CA A1303 1 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM CA CALCIUM ION FORMUL 4 SF4 FE4 S4 FORMUL 5 CA 2(CA 2+) HELIX 1 AA1 SER A 27 PHE A 48 1 22 HELIX 2 AA2 CYS A 112 PHE A 124 1 13 HELIX 3 AA3 ASN A 143 GLY A 147 5 5 HELIX 4 AA4 THR A 159 ASP A 181 1 23 HELIX 5 AA5 PRO A 227 LYS A 237 1 11 HELIX 6 AA6 ASP A 339 LYS A 355 1 17 HELIX 7 AA7 PHE A 367 HIS A 379 1 13 HELIX 8 AA8 SER A 382 ILE A 387 1 6 HELIX 9 AA9 CYS A 407 ASP A 414 1 8 HELIX 10 AB1 ASN A 423 LEU A 432 1 10 HELIX 11 AB2 ASP A 443 GLN A 451 1 9 HELIX 12 AB3 GLN A 451 TYR A 473 1 23 HELIX 13 AB4 TYR A 473 CYS A 482 1 10 HELIX 14 AB5 THR A 483 ILE A 485 5 3 HELIX 15 AB6 GLU A 488 LYS A 495 1 8 HELIX 16 AB7 GLY A 496 ALA A 512 1 17 HELIX 17 AB8 ASN A 563 LEU A 571 1 9 HELIX 18 AB9 ARG A 573 GLU A 584 1 12 HELIX 19 AC1 PRO A 589 VAL A 593 5 5 HELIX 20 AC2 ASN A 595 VAL A 613 1 19 HELIX 21 AC3 ALA A 629 ARG A 639 1 11 HELIX 22 AC4 ASP A 647 ALA A 652 1 6 HELIX 23 AC5 SER A 679 GLU A 693 1 15 HELIX 24 AC6 ALA A 706 LEU A 710 5 5 HELIX 25 AC7 SER A 711 TYR A 731 1 21 HELIX 26 AC8 SER A 752 GLY A 786 1 35 HELIX 27 AC9 ASP A 787 TYR A 818 1 32 HELIX 28 AD1 SER A 828 GLY A 854 1 27 HELIX 29 AD2 TYR A 892 PHE A 905 1 14 HELIX 30 AD3 LEU A 979 LEU A 994 1 16 HELIX 31 AD4 THR A 998 SER A 1019 1 22 HELIX 32 AD5 PRO A 1025 SER A 1034 1 10 HELIX 33 AD6 LYS A 1042 GLY A 1047 5 6 HELIX 34 AD7 SER A 1051 GLY A 1065 1 15 HELIX 35 AD8 ASP A 1066 VAL A 1069 5 4 HELIX 36 AD9 ALA A 1097 ALA A 1101 5 5 HELIX 37 AE1 GLU A 1102 LEU A 1114 1 13 HELIX 38 AE2 ASP A 1123 LEU A 1128 1 6 HELIX 39 AE3 ASP A 1129 ILE A 1145 1 17 HELIX 40 AE4 ILE A 1145 GLN A 1152 1 8 HELIX 41 AE5 PRO A 1164 ASN A 1175 1 12 SHEET 1 AA1 6 GLU A 51 ARG A 52 0 SHEET 2 AA1 6 ARG A 93 PRO A 99 1 O LYS A 95 N GLU A 51 SHEET 3 AA1 6 LEU A 78 ILE A 87 -1 N PHE A 86 O PHE A 94 SHEET 4 AA1 6 GLY A 57 LEU A 72 -1 N HIS A 67 O ASP A 83 SHEET 5 AA1 6 TRP A 243 TYR A 248 -1 O VAL A 246 N LYS A 59 SHEET 6 AA1 6 GLU A 256 ARG A 259 -1 O THR A 258 N ASN A 245 SHEET 1 AA2 4 ILE A 128 LYS A 136 0 SHEET 2 AA2 4 ARG A 150 PHE A 157 -1 O SER A 156 N ALA A 129 SHEET 3 AA2 4 TYR A 103 THR A 108 -1 N PHE A 104 O LEU A 155 SHEET 4 AA2 4 ILE A 218 ARG A 222 -1 O ASP A 220 N ALA A 107 SHEET 1 AA3 7 PHE A 320 GLU A 321 0 SHEET 2 AA3 7 PRO A 331 GLU A 337 -1 O PHE A 332 N PHE A 320 SHEET 3 AA3 7 GLN A 303 ASN A 309 1 N LEU A 306 O PHE A 335 SHEET 4 AA3 7 ILE A 293 ILE A 300 -1 N ILE A 296 O ILE A 307 SHEET 5 AA3 7 VAL A 271 THR A 278 -1 N ASP A 275 O SER A 297 SHEET 6 AA3 7 ILE A 358 THR A 361 1 O ILE A 358 N LEU A 272 SHEET 7 AA3 7 ILE A 403 ASP A 406 1 O ILE A 403 N MET A 359 SHEET 1 AA4 2 GLN A 390 LYS A 391 0 SHEET 2 AA4 2 TYR A 397 LYS A 398 -1 O LYS A 398 N GLN A 390 SHEET 1 AA5 3 LEU A 534 TYR A 539 0 SHEET 2 AA5 3 GLN A 664 PHE A 675 -1 O GLU A 674 N ASP A 535 SHEET 3 AA5 3 ILE A 736 CYS A 747 -1 O ILE A 746 N ARG A 665 SHEET 1 AA6 5 GLU A 545 ALA A 546 0 SHEET 2 AA6 5 ARG A 855 ASP A 860 -1 O LEU A 859 N GLU A 545 SHEET 3 AA6 5 GLY A 863 PRO A 869 -1 O TRP A 865 N GLU A 858 SHEET 4 AA6 5 PRO A 620 VAL A 627 -1 N TYR A 623 O CYS A 866 SHEET 5 AA6 5 PHE A 931 TYR A 937 -1 O GLU A 932 N ASP A 626 SHEET 1 AA7 4 GLY A 550 ARG A 553 0 SHEET 2 AA7 4 ALA A 939 LEU A 942 -1 O MET A 940 N PHE A 552 SHEET 3 AA7 4 TYR A 956 PHE A 959 -1 O PHE A 959 N ALA A 939 SHEET 4 AA7 4 LEU A 965 LYS A 969 -1 O GLU A 967 N VAL A 958 SHEET 1 AA8 2 CYS A 558 PHE A 560 0 SHEET 2 AA8 2 ARG A 616 GLU A 618 -1 O ARG A 616 N PHE A 560 SHEET 1 AA9 2 ASN A 875 LYS A 879 0 SHEET 2 AA9 2 LYS A 887 SER A 891 -1 O VAL A 888 N PHE A 878 SHEET 1 AB1 2 ASN A 907 LEU A 913 0 SHEET 2 AB1 2 TYR A 921 GLU A 926 -1 O VAL A 922 N GLU A 912 SHEET 1 AB2 2 ARG A1037 SER A1038 0 SHEET 2 AB2 2 SER A1075 CYS A1076 -1 O CYS A1076 N ARG A1037 SHEET 1 AB3 2 TYR A1078 ILE A1080 0 SHEET 2 AB3 2 ALA A1093 PRO A1095 -1 O ILE A1094 N ILE A1079 LINK OD1 ASP A 275 CA CA A1302 1555 1555 2.94 LINK OD2 ASP A 275 CA CA A1303 1555 1555 2.39 LINK OE2 GLU A 277 CA CA A1303 1555 1555 2.64 LINK OD1 ASP A 368 CA CA A1302 1555 1555 3.01 LINK OD2 ASP A 368 CA CA A1302 1555 1555 2.97 LINK OD2 ASP A 462 CA CA A1303 1555 1555 2.61 LINK SG CYS A 651 FE1 SF4 A1301 1555 1555 2.30 LINK SG CYS A 654 FE2 SF4 A1301 1555 1555 2.31 LINK SG CYS A 663 FE3 SF4 A1301 1555 1555 2.30 LINK SG CYS A 747 FE4 SF4 A1301 1555 1555 2.30 LINK CA CA A1302 O3' DT P 30 1555 1555 2.39 LINK CA CA A1302 OP1 DC P 31 1555 1555 2.15 LINK CA CA A1303 OP1 DC P 31 1555 1555 2.14 LINK CA CA A1303 O5' DC P 31 1555 1555 2.20 CISPEP 1 GLY A 935 PRO A 936 0 4.47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000