data_9FFH # _entry.id 9FFH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FFH pdb_00009ffh 10.2210/pdb9ffh/pdb WWPDB D_1292138271 ? ? EMDB EMD-50357 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-06-12 2 'Structure model' 1 1 2024-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FFH _pdbx_database_status.recvd_initial_deposition_date 2024-05-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'empty virion map' EMD-50356 'other EM volume' PDB 'model of the major capsid protein of Ebor built into the empty virion' 9FFG unspecified EMDB 'Ebor native virion attached to the outer membrane vesicle' EMD-50360 'other EM volume' EMDB 'Ebor native virion attached to the host cell solved by single particle analysis' EMD-50359 'other EM volume' EMDB 'Ebor native virion attached to the host cell solved by subtomogram averaging' EMD-50361 'other EM volume' EMDB 'in vitro-induced genome-releasing virion of Ebor' EMD-50358 'other EM volume' EMDB 'Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry' EMD-50357 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 pavol.bardy@york.ac.uk Pavol Bardy ? 'principal investigator/group leader' 0000-0002-1223-2584 4 fred.antson@york.ac.uk Alfred Antson A. 'principal investigator/group leader' 0000-0002-1223-2584 5 paul.fogg@york.ac.uk Paul Fogg C.M. 'principal investigator/group leader' 0000-0001-5324-4293 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bardy, P.' 1 0000-0002-1223-2584 'MacDonald, C.I.W.' 2 ? 'Jenkins, H.T.' 3 0000-0002-3302-6966 'Chechik, M.' 4 ? 'Hart, S.J.' 5 ? 'Turkenburg, J.P.' 6 ? 'Blaza, J.N.' 7 0000-0001-5420-2116 'Fogg, P.C.M.' 8 0000-0001-5324-4293 'Antson, A.A.' 9 0000-0002-4533-3816 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2024.06.11.598214 _citation.pdbx_database_id_PubMed 38915634 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bardy, P.' 1 0000-0002-1223-2584 primary 'MacDonald, C.I.W.' 2 ? primary 'Kirchberger, P.C.' 3 0000-0002-8387-6440 primary 'Jenkins, H.T.' 4 0000-0002-3302-6966 primary 'Botka, T.' 5 0000-0003-2708-3718 primary 'Byrom, L.' 6 ? primary 'Alim, N.T.B.' 7 ? primary 'Traore, D.A.K.' 8 0000-0003-1001-4716 primary 'Konig, H.C.' 9 ? primary 'Nicholas, T.R.' 10 ? primary 'Chechik, M.' 11 ? primary 'Hart, S.J.' 12 ? primary 'Turkenburg, J.P.' 13 ? primary 'Blaza, J.N.' 14 0000-0001-5420-2116 primary 'Beatty, J.T.' 15 0000-0002-1425-0532 primary 'Fogg, P.C.M.' 16 0000-0001-5324-4293 primary 'Antson, A.A.' 17 0000-0002-4533-3816 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Major capsid protein' _entity.formula_weight 55885.539 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation 'variant R120' _entity.pdbx_fragment ? _entity.details 'Ebor variant R120' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSYQTKRNVRREARTLMGRFKAGKLAPVMAVPVKGSEGGMLSQSVSFELDPIAGRMATPITAEMCAVFVPVQACDALKNP EADYAGMTEIVREKLLSGNPLFVLEPETDVSKRCGVNPRRNNGLMRVNEIVRLAHNCAVNFLRRRRYVDAVQLTAANHST TPAILSQTVLDRFNGALDPDPNVNGAVQLSMPDMRLPVASDAEKAVTAPLTVKRGNENRRLDAGISRLAAAEVAAATDAA LYAVFGGREAGNVSLTDFYNAQKMDELTRVMRKICDDNPEYGEEMVLRWAHGLSVDPGRVPFLLAEKSVVLGRQIIGATD TAGVEDGVKRSDMAAQLSFTVPIPTTELGGIIVTFACIKPDETLSSQPHPILADHWRLDNFVADELALDPQPVMARELDY KVAQANETTVVFYTGLNELKKTYVSYGLCRALDPNTVESKNAVWQLEVPLSVTPETVLYPADLPQYPFADQQAEVCTYVV QSTAVMPTPMIFGPSPVEQLAVIETEDLFED ; _entity_poly.pdbx_seq_one_letter_code_can ;MSYQTKRNVRREARTLMGRFKAGKLAPVMAVPVKGSEGGMLSQSVSFELDPIAGRMATPITAEMCAVFVPVQACDALKNP EADYAGMTEIVREKLLSGNPLFVLEPETDVSKRCGVNPRRNNGLMRVNEIVRLAHNCAVNFLRRRRYVDAVQLTAANHST TPAILSQTVLDRFNGALDPDPNVNGAVQLSMPDMRLPVASDAEKAVTAPLTVKRGNENRRLDAGISRLAAAEVAAATDAA LYAVFGGREAGNVSLTDFYNAQKMDELTRVMRKICDDNPEYGEEMVLRWAHGLSVDPGRVPFLLAEKSVVLGRQIIGATD TAGVEDGVKRSDMAAQLSFTVPIPTTELGGIIVTFACIKPDETLSSQPHPILADHWRLDNFVADELALDPQPVMARELDY KVAQANETTVVFYTGLNELKKTYVSYGLCRALDPNTVESKNAVWQLEVPLSVTPETVLYPADLPQYPFADQQAEVCTYVV QSTAVMPTPMIFGPSPVEQLAVIETEDLFED ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 TYR n 1 4 GLN n 1 5 THR n 1 6 LYS n 1 7 ARG n 1 8 ASN n 1 9 VAL n 1 10 ARG n 1 11 ARG n 1 12 GLU n 1 13 ALA n 1 14 ARG n 1 15 THR n 1 16 LEU n 1 17 MET n 1 18 GLY n 1 19 ARG n 1 20 PHE n 1 21 LYS n 1 22 ALA n 1 23 GLY n 1 24 LYS n 1 25 LEU n 1 26 ALA n 1 27 PRO n 1 28 VAL n 1 29 MET n 1 30 ALA n 1 31 VAL n 1 32 PRO n 1 33 VAL n 1 34 LYS n 1 35 GLY n 1 36 SER n 1 37 GLU n 1 38 GLY n 1 39 GLY n 1 40 MET n 1 41 LEU n 1 42 SER n 1 43 GLN n 1 44 SER n 1 45 VAL n 1 46 SER n 1 47 PHE n 1 48 GLU n 1 49 LEU n 1 50 ASP n 1 51 PRO n 1 52 ILE n 1 53 ALA n 1 54 GLY n 1 55 ARG n 1 56 MET n 1 57 ALA n 1 58 THR n 1 59 PRO n 1 60 ILE n 1 61 THR n 1 62 ALA n 1 63 GLU n 1 64 MET n 1 65 CYS n 1 66 ALA n 1 67 VAL n 1 68 PHE n 1 69 VAL n 1 70 PRO n 1 71 VAL n 1 72 GLN n 1 73 ALA n 1 74 CYS n 1 75 ASP n 1 76 ALA n 1 77 LEU n 1 78 LYS n 1 79 ASN n 1 80 PRO n 1 81 GLU n 1 82 ALA n 1 83 ASP n 1 84 TYR n 1 85 ALA n 1 86 GLY n 1 87 MET n 1 88 THR n 1 89 GLU n 1 90 ILE n 1 91 VAL n 1 92 ARG n 1 93 GLU n 1 94 LYS n 1 95 LEU n 1 96 LEU n 1 97 SER n 1 98 GLY n 1 99 ASN n 1 100 PRO n 1 101 LEU n 1 102 PHE n 1 103 VAL n 1 104 LEU n 1 105 GLU n 1 106 PRO n 1 107 GLU n 1 108 THR n 1 109 ASP n 1 110 VAL n 1 111 SER n 1 112 LYS n 1 113 ARG n 1 114 CYS n 1 115 GLY n 1 116 VAL n 1 117 ASN n 1 118 PRO n 1 119 ARG n 1 120 ARG n 1 121 ASN n 1 122 ASN n 1 123 GLY n 1 124 LEU n 1 125 MET n 1 126 ARG n 1 127 VAL n 1 128 ASN n 1 129 GLU n 1 130 ILE n 1 131 VAL n 1 132 ARG n 1 133 LEU n 1 134 ALA n 1 135 HIS n 1 136 ASN n 1 137 CYS n 1 138 ALA n 1 139 VAL n 1 140 ASN n 1 141 PHE n 1 142 LEU n 1 143 ARG n 1 144 ARG n 1 145 ARG n 1 146 ARG n 1 147 TYR n 1 148 VAL n 1 149 ASP n 1 150 ALA n 1 151 VAL n 1 152 GLN n 1 153 LEU n 1 154 THR n 1 155 ALA n 1 156 ALA n 1 157 ASN n 1 158 HIS n 1 159 SER n 1 160 THR n 1 161 THR n 1 162 PRO n 1 163 ALA n 1 164 ILE n 1 165 LEU n 1 166 SER n 1 167 GLN n 1 168 THR n 1 169 VAL n 1 170 LEU n 1 171 ASP n 1 172 ARG n 1 173 PHE n 1 174 ASN n 1 175 GLY n 1 176 ALA n 1 177 LEU n 1 178 ASP n 1 179 PRO n 1 180 ASP n 1 181 PRO n 1 182 ASN n 1 183 VAL n 1 184 ASN n 1 185 GLY n 1 186 ALA n 1 187 VAL n 1 188 GLN n 1 189 LEU n 1 190 SER n 1 191 MET n 1 192 PRO n 1 193 ASP n 1 194 MET n 1 195 ARG n 1 196 LEU n 1 197 PRO n 1 198 VAL n 1 199 ALA n 1 200 SER n 1 201 ASP n 1 202 ALA n 1 203 GLU n 1 204 LYS n 1 205 ALA n 1 206 VAL n 1 207 THR n 1 208 ALA n 1 209 PRO n 1 210 LEU n 1 211 THR n 1 212 VAL n 1 213 LYS n 1 214 ARG n 1 215 GLY n 1 216 ASN n 1 217 GLU n 1 218 ASN n 1 219 ARG n 1 220 ARG n 1 221 LEU n 1 222 ASP n 1 223 ALA n 1 224 GLY n 1 225 ILE n 1 226 SER n 1 227 ARG n 1 228 LEU n 1 229 ALA n 1 230 ALA n 1 231 ALA n 1 232 GLU n 1 233 VAL n 1 234 ALA n 1 235 ALA n 1 236 ALA n 1 237 THR n 1 238 ASP n 1 239 ALA n 1 240 ALA n 1 241 LEU n 1 242 TYR n 1 243 ALA n 1 244 VAL n 1 245 PHE n 1 246 GLY n 1 247 GLY n 1 248 ARG n 1 249 GLU n 1 250 ALA n 1 251 GLY n 1 252 ASN n 1 253 VAL n 1 254 SER n 1 255 LEU n 1 256 THR n 1 257 ASP n 1 258 PHE n 1 259 TYR n 1 260 ASN n 1 261 ALA n 1 262 GLN n 1 263 LYS n 1 264 MET n 1 265 ASP n 1 266 GLU n 1 267 LEU n 1 268 THR n 1 269 ARG n 1 270 VAL n 1 271 MET n 1 272 ARG n 1 273 LYS n 1 274 ILE n 1 275 CYS n 1 276 ASP n 1 277 ASP n 1 278 ASN n 1 279 PRO n 1 280 GLU n 1 281 TYR n 1 282 GLY n 1 283 GLU n 1 284 GLU n 1 285 MET n 1 286 VAL n 1 287 LEU n 1 288 ARG n 1 289 TRP n 1 290 ALA n 1 291 HIS n 1 292 GLY n 1 293 LEU n 1 294 SER n 1 295 VAL n 1 296 ASP n 1 297 PRO n 1 298 GLY n 1 299 ARG n 1 300 VAL n 1 301 PRO n 1 302 PHE n 1 303 LEU n 1 304 LEU n 1 305 ALA n 1 306 GLU n 1 307 LYS n 1 308 SER n 1 309 VAL n 1 310 VAL n 1 311 LEU n 1 312 GLY n 1 313 ARG n 1 314 GLN n 1 315 ILE n 1 316 ILE n 1 317 GLY n 1 318 ALA n 1 319 THR n 1 320 ASP n 1 321 THR n 1 322 ALA n 1 323 GLY n 1 324 VAL n 1 325 GLU n 1 326 ASP n 1 327 GLY n 1 328 VAL n 1 329 LYS n 1 330 ARG n 1 331 SER n 1 332 ASP n 1 333 MET n 1 334 ALA n 1 335 ALA n 1 336 GLN n 1 337 LEU n 1 338 SER n 1 339 PHE n 1 340 THR n 1 341 VAL n 1 342 PRO n 1 343 ILE n 1 344 PRO n 1 345 THR n 1 346 THR n 1 347 GLU n 1 348 LEU n 1 349 GLY n 1 350 GLY n 1 351 ILE n 1 352 ILE n 1 353 VAL n 1 354 THR n 1 355 PHE n 1 356 ALA n 1 357 CYS n 1 358 ILE n 1 359 LYS n 1 360 PRO n 1 361 ASP n 1 362 GLU n 1 363 THR n 1 364 LEU n 1 365 SER n 1 366 SER n 1 367 GLN n 1 368 PRO n 1 369 HIS n 1 370 PRO n 1 371 ILE n 1 372 LEU n 1 373 ALA n 1 374 ASP n 1 375 HIS n 1 376 TRP n 1 377 ARG n 1 378 LEU n 1 379 ASP n 1 380 ASN n 1 381 PHE n 1 382 VAL n 1 383 ALA n 1 384 ASP n 1 385 GLU n 1 386 LEU n 1 387 ALA n 1 388 LEU n 1 389 ASP n 1 390 PRO n 1 391 GLN n 1 392 PRO n 1 393 VAL n 1 394 MET n 1 395 ALA n 1 396 ARG n 1 397 GLU n 1 398 LEU n 1 399 ASP n 1 400 TYR n 1 401 LYS n 1 402 VAL n 1 403 ALA n 1 404 GLN n 1 405 ALA n 1 406 ASN n 1 407 GLU n 1 408 THR n 1 409 THR n 1 410 VAL n 1 411 VAL n 1 412 PHE n 1 413 TYR n 1 414 THR n 1 415 GLY n 1 416 LEU n 1 417 ASN n 1 418 GLU n 1 419 LEU n 1 420 LYS n 1 421 LYS n 1 422 THR n 1 423 TYR n 1 424 VAL n 1 425 SER n 1 426 TYR n 1 427 GLY n 1 428 LEU n 1 429 CYS n 1 430 ARG n 1 431 ALA n 1 432 LEU n 1 433 ASP n 1 434 PRO n 1 435 ASN n 1 436 THR n 1 437 VAL n 1 438 GLU n 1 439 SER n 1 440 LYS n 1 441 ASN n 1 442 ALA n 1 443 VAL n 1 444 TRP n 1 445 GLN n 1 446 LEU n 1 447 GLU n 1 448 VAL n 1 449 PRO n 1 450 LEU n 1 451 SER n 1 452 VAL n 1 453 THR n 1 454 PRO n 1 455 GLU n 1 456 THR n 1 457 VAL n 1 458 LEU n 1 459 TYR n 1 460 PRO n 1 461 ALA n 1 462 ASP n 1 463 LEU n 1 464 PRO n 1 465 GLN n 1 466 TYR n 1 467 PRO n 1 468 PHE n 1 469 ALA n 1 470 ASP n 1 471 GLN n 1 472 GLN n 1 473 ALA n 1 474 GLU n 1 475 VAL n 1 476 CYS n 1 477 THR n 1 478 TYR n 1 479 VAL n 1 480 VAL n 1 481 GLN n 1 482 SER n 1 483 THR n 1 484 ALA n 1 485 VAL n 1 486 MET n 1 487 PRO n 1 488 THR n 1 489 PRO n 1 490 MET n 1 491 ILE n 1 492 PHE n 1 493 GLY n 1 494 PRO n 1 495 SER n 1 496 PRO n 1 497 VAL n 1 498 GLU n 1 499 GLN n 1 500 LEU n 1 501 ALA n 1 502 VAL n 1 503 ILE n 1 504 GLU n 1 505 THR n 1 506 GLU n 1 507 ASP n 1 508 LEU n 1 509 PHE n 1 510 GLU n 1 511 ASP n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 511 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Rhodobacter capsulatus SB 1003' _entity_src_nat.pdbx_ncbi_taxonomy_id 272942 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain SB1003 _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 SER 2 2 ? ? ? B . n A 1 3 TYR 3 3 3 TYR TYR B . n A 1 4 GLN 4 4 4 GLN GLN B . n A 1 5 THR 5 5 5 THR THR B . n A 1 6 LYS 6 6 6 LYS LYS B . n A 1 7 ARG 7 7 7 ARG ARG B . n A 1 8 ASN 8 8 8 ASN ASN B . n A 1 9 VAL 9 9 9 VAL VAL B . n A 1 10 ARG 10 10 10 ARG ARG B . n A 1 11 ARG 11 11 11 ARG ARG B . n A 1 12 GLU 12 12 12 GLU GLU B . n A 1 13 ALA 13 13 13 ALA ALA B . n A 1 14 ARG 14 14 14 ARG ARG B . n A 1 15 THR 15 15 15 THR THR B . n A 1 16 LEU 16 16 16 LEU LEU B . n A 1 17 MET 17 17 17 MET MET B . n A 1 18 GLY 18 18 18 GLY GLY B . n A 1 19 ARG 19 19 19 ARG ARG B . n A 1 20 PHE 20 20 20 PHE PHE B . n A 1 21 LYS 21 21 21 LYS LYS B . n A 1 22 ALA 22 22 22 ALA ALA B . n A 1 23 GLY 23 23 23 GLY GLY B . n A 1 24 LYS 24 24 24 LYS LYS B . n A 1 25 LEU 25 25 25 LEU LEU B . n A 1 26 ALA 26 26 26 ALA ALA B . n A 1 27 PRO 27 27 27 PRO PRO B . n A 1 28 VAL 28 28 28 VAL VAL B . n A 1 29 MET 29 29 29 MET MET B . n A 1 30 ALA 30 30 30 ALA ALA B . n A 1 31 VAL 31 31 31 VAL VAL B . n A 1 32 PRO 32 32 32 PRO PRO B . n A 1 33 VAL 33 33 33 VAL VAL B . n A 1 34 LYS 34 34 34 LYS LYS B . n A 1 35 GLY 35 35 35 GLY GLY B . n A 1 36 SER 36 36 36 SER SER B . n A 1 37 GLU 37 37 37 GLU GLU B . n A 1 38 GLY 38 38 38 GLY GLY B . n A 1 39 GLY 39 39 39 GLY GLY B . n A 1 40 MET 40 40 40 MET MET B . n A 1 41 LEU 41 41 41 LEU LEU B . n A 1 42 SER 42 42 42 SER SER B . n A 1 43 GLN 43 43 43 GLN GLN B . n A 1 44 SER 44 44 44 SER SER B . n A 1 45 VAL 45 45 45 VAL VAL B . n A 1 46 SER 46 46 46 SER SER B . n A 1 47 PHE 47 47 47 PHE PHE B . n A 1 48 GLU 48 48 48 GLU GLU B . n A 1 49 LEU 49 49 49 LEU LEU B . n A 1 50 ASP 50 50 50 ASP ASP B . n A 1 51 PRO 51 51 51 PRO PRO B . n A 1 52 ILE 52 52 52 ILE ILE B . n A 1 53 ALA 53 53 53 ALA ALA B . n A 1 54 GLY 54 54 54 GLY GLY B . n A 1 55 ARG 55 55 55 ARG ARG B . n A 1 56 MET 56 56 56 MET MET B . n A 1 57 ALA 57 57 57 ALA ALA B . n A 1 58 THR 58 58 58 THR THR B . n A 1 59 PRO 59 59 59 PRO PRO B . n A 1 60 ILE 60 60 60 ILE ILE B . n A 1 61 THR 61 61 61 THR THR B . n A 1 62 ALA 62 62 62 ALA ALA B . n A 1 63 GLU 63 63 63 GLU GLU B . n A 1 64 MET 64 64 64 MET MET B . n A 1 65 CYS 65 65 65 CYS CYS B . n A 1 66 ALA 66 66 66 ALA ALA B . n A 1 67 VAL 67 67 67 VAL VAL B . n A 1 68 PHE 68 68 68 PHE PHE B . n A 1 69 VAL 69 69 69 VAL VAL B . n A 1 70 PRO 70 70 70 PRO PRO B . n A 1 71 VAL 71 71 71 VAL VAL B . n A 1 72 GLN 72 72 72 GLN GLN B . n A 1 73 ALA 73 73 73 ALA ALA B . n A 1 74 CYS 74 74 74 CYS CYS B . n A 1 75 ASP 75 75 75 ASP ASP B . n A 1 76 ALA 76 76 76 ALA ALA B . n A 1 77 LEU 77 77 77 LEU LEU B . n A 1 78 LYS 78 78 78 LYS LYS B . n A 1 79 ASN 79 79 79 ASN ASN B . n A 1 80 PRO 80 80 80 PRO PRO B . n A 1 81 GLU 81 81 81 GLU GLU B . n A 1 82 ALA 82 82 82 ALA ALA B . n A 1 83 ASP 83 83 83 ASP ASP B . n A 1 84 TYR 84 84 84 TYR TYR B . n A 1 85 ALA 85 85 85 ALA ALA B . n A 1 86 GLY 86 86 86 GLY GLY B . n A 1 87 MET 87 87 87 MET MET B . n A 1 88 THR 88 88 88 THR THR B . n A 1 89 GLU 89 89 89 GLU GLU B . n A 1 90 ILE 90 90 90 ILE ILE B . n A 1 91 VAL 91 91 91 VAL VAL B . n A 1 92 ARG 92 92 92 ARG ARG B . n A 1 93 GLU 93 93 93 GLU GLU B . n A 1 94 LYS 94 94 94 LYS LYS B . n A 1 95 LEU 95 95 95 LEU LEU B . n A 1 96 LEU 96 96 96 LEU LEU B . n A 1 97 SER 97 97 97 SER SER B . n A 1 98 GLY 98 98 98 GLY GLY B . n A 1 99 ASN 99 99 99 ASN ASN B . n A 1 100 PRO 100 100 100 PRO PRO B . n A 1 101 LEU 101 101 101 LEU LEU B . n A 1 102 PHE 102 102 102 PHE PHE B . n A 1 103 VAL 103 103 103 VAL VAL B . n A 1 104 LEU 104 104 104 LEU LEU B . n A 1 105 GLU 105 105 105 GLU GLU B . n A 1 106 PRO 106 106 106 PRO PRO B . n A 1 107 GLU 107 107 107 GLU GLU B . n A 1 108 THR 108 108 108 THR THR B . n A 1 109 ASP 109 109 109 ASP ASP B . n A 1 110 VAL 110 110 110 VAL VAL B . n A 1 111 SER 111 111 111 SER SER B . n A 1 112 LYS 112 112 112 LYS LYS B . n A 1 113 ARG 113 113 113 ARG ARG B . n A 1 114 CYS 114 114 114 CYS CYS B . n A 1 115 GLY 115 115 115 GLY GLY B . n A 1 116 VAL 116 116 116 VAL VAL B . n A 1 117 ASN 117 117 117 ASN ASN B . n A 1 118 PRO 118 118 118 PRO PRO B . n A 1 119 ARG 119 119 119 ARG ARG B . n A 1 120 ARG 120 120 120 ARG ARG B . n A 1 121 ASN 121 121 121 ASN ASN B . n A 1 122 ASN 122 122 122 ASN ASN B . n A 1 123 GLY 123 123 123 GLY GLY B . n A 1 124 LEU 124 124 124 LEU LEU B . n A 1 125 MET 125 125 125 MET MET B . n A 1 126 ARG 126 126 126 ARG ARG B . n A 1 127 VAL 127 127 127 VAL VAL B . n A 1 128 ASN 128 128 128 ASN ASN B . n A 1 129 GLU 129 129 129 GLU GLU B . n A 1 130 ILE 130 130 130 ILE ILE B . n A 1 131 VAL 131 131 131 VAL VAL B . n A 1 132 ARG 132 132 132 ARG ARG B . n A 1 133 LEU 133 133 133 LEU LEU B . n A 1 134 ALA 134 134 134 ALA ALA B . n A 1 135 HIS 135 135 135 HIS HIS B . n A 1 136 ASN 136 136 136 ASN ASN B . n A 1 137 CYS 137 137 137 CYS CYS B . n A 1 138 ALA 138 138 138 ALA ALA B . n A 1 139 VAL 139 139 139 VAL VAL B . n A 1 140 ASN 140 140 140 ASN ASN B . n A 1 141 PHE 141 141 141 PHE PHE B . n A 1 142 LEU 142 142 142 LEU LEU B . n A 1 143 ARG 143 143 143 ARG ARG B . n A 1 144 ARG 144 144 144 ARG ARG B . n A 1 145 ARG 145 145 145 ARG ARG B . n A 1 146 ARG 146 146 146 ARG ARG B . n A 1 147 TYR 147 147 147 TYR TYR B . n A 1 148 VAL 148 148 148 VAL VAL B . n A 1 149 ASP 149 149 149 ASP ASP B . n A 1 150 ALA 150 150 150 ALA ALA B . n A 1 151 VAL 151 151 151 VAL VAL B . n A 1 152 GLN 152 152 152 GLN GLN B . n A 1 153 LEU 153 153 153 LEU LEU B . n A 1 154 THR 154 154 154 THR THR B . n A 1 155 ALA 155 155 155 ALA ALA B . n A 1 156 ALA 156 156 156 ALA ALA B . n A 1 157 ASN 157 157 157 ASN ASN B . n A 1 158 HIS 158 158 158 HIS HIS B . n A 1 159 SER 159 159 159 SER SER B . n A 1 160 THR 160 160 160 THR THR B . n A 1 161 THR 161 161 161 THR THR B . n A 1 162 PRO 162 162 162 PRO PRO B . n A 1 163 ALA 163 163 163 ALA ALA B . n A 1 164 ILE 164 164 164 ILE ILE B . n A 1 165 LEU 165 165 165 LEU LEU B . n A 1 166 SER 166 166 166 SER SER B . n A 1 167 GLN 167 167 167 GLN GLN B . n A 1 168 THR 168 168 168 THR THR B . n A 1 169 VAL 169 169 169 VAL VAL B . n A 1 170 LEU 170 170 170 LEU LEU B . n A 1 171 ASP 171 171 171 ASP ASP B . n A 1 172 ARG 172 172 172 ARG ARG B . n A 1 173 PHE 173 173 173 PHE PHE B . n A 1 174 ASN 174 174 174 ASN ASN B . n A 1 175 GLY 175 175 175 GLY GLY B . n A 1 176 ALA 176 176 176 ALA ALA B . n A 1 177 LEU 177 177 177 LEU LEU B . n A 1 178 ASP 178 178 178 ASP ASP B . n A 1 179 PRO 179 179 179 PRO PRO B . n A 1 180 ASP 180 180 180 ASP ASP B . n A 1 181 PRO 181 181 181 PRO PRO B . n A 1 182 ASN 182 182 182 ASN ASN B . n A 1 183 VAL 183 183 183 VAL VAL B . n A 1 184 ASN 184 184 184 ASN ASN B . n A 1 185 GLY 185 185 185 GLY GLY B . n A 1 186 ALA 186 186 186 ALA ALA B . n A 1 187 VAL 187 187 187 VAL VAL B . n A 1 188 GLN 188 188 188 GLN GLN B . n A 1 189 LEU 189 189 189 LEU LEU B . n A 1 190 SER 190 190 190 SER SER B . n A 1 191 MET 191 191 191 MET MET B . n A 1 192 PRO 192 192 192 PRO PRO B . n A 1 193 ASP 193 193 ? ? ? B . n A 1 194 MET 194 194 ? ? ? B . n A 1 195 ARG 195 195 ? ? ? B . n A 1 196 LEU 196 196 ? ? ? B . n A 1 197 PRO 197 197 ? ? ? B . n A 1 198 VAL 198 198 ? ? ? B . n A 1 199 ALA 199 199 ? ? ? B . n A 1 200 SER 200 200 ? ? ? B . n A 1 201 ASP 201 201 ? ? ? B . n A 1 202 ALA 202 202 ? ? ? B . n A 1 203 GLU 203 203 ? ? ? B . n A 1 204 LYS 204 204 ? ? ? B . n A 1 205 ALA 205 205 ? ? ? B . n A 1 206 VAL 206 206 ? ? ? B . n A 1 207 THR 207 207 ? ? ? B . n A 1 208 ALA 208 208 ? ? ? B . n A 1 209 PRO 209 209 ? ? ? B . n A 1 210 LEU 210 210 ? ? ? B . n A 1 211 THR 211 211 ? ? ? B . n A 1 212 VAL 212 212 ? ? ? B . n A 1 213 LYS 213 213 ? ? ? B . n A 1 214 ARG 214 214 ? ? ? B . n A 1 215 GLY 215 215 ? ? ? B . n A 1 216 ASN 216 216 ? ? ? B . n A 1 217 GLU 217 217 ? ? ? B . n A 1 218 ASN 218 218 ? ? ? B . n A 1 219 ARG 219 219 ? ? ? B . n A 1 220 ARG 220 220 ? ? ? B . n A 1 221 LEU 221 221 ? ? ? B . n A 1 222 ASP 222 222 ? ? ? B . n A 1 223 ALA 223 223 ? ? ? B . n A 1 224 GLY 224 224 ? ? ? B . n A 1 225 ILE 225 225 ? ? ? B . n A 1 226 SER 226 226 ? ? ? B . n A 1 227 ARG 227 227 ? ? ? B . n A 1 228 LEU 228 228 ? ? ? B . n A 1 229 ALA 229 229 ? ? ? B . n A 1 230 ALA 230 230 ? ? ? B . n A 1 231 ALA 231 231 ? ? ? B . n A 1 232 GLU 232 232 ? ? ? B . n A 1 233 VAL 233 233 ? ? ? B . n A 1 234 ALA 234 234 ? ? ? B . n A 1 235 ALA 235 235 ? ? ? B . n A 1 236 ALA 236 236 ? ? ? B . n A 1 237 THR 237 237 ? ? ? B . n A 1 238 ASP 238 238 ? ? ? B . n A 1 239 ALA 239 239 ? ? ? B . n A 1 240 ALA 240 240 ? ? ? B . n A 1 241 LEU 241 241 ? ? ? B . n A 1 242 TYR 242 242 ? ? ? B . n A 1 243 ALA 243 243 ? ? ? B . n A 1 244 VAL 244 244 ? ? ? B . n A 1 245 PHE 245 245 ? ? ? B . n A 1 246 GLY 246 246 ? ? ? B . n A 1 247 GLY 247 247 ? ? ? B . n A 1 248 ARG 248 248 ? ? ? B . n A 1 249 GLU 249 249 ? ? ? B . n A 1 250 ALA 250 250 250 ALA ALA B . n A 1 251 GLY 251 251 251 GLY GLY B . n A 1 252 ASN 252 252 252 ASN ASN B . n A 1 253 VAL 253 253 253 VAL VAL B . n A 1 254 SER 254 254 254 SER SER B . n A 1 255 LEU 255 255 255 LEU LEU B . n A 1 256 THR 256 256 256 THR THR B . n A 1 257 ASP 257 257 257 ASP ASP B . n A 1 258 PHE 258 258 258 PHE PHE B . n A 1 259 TYR 259 259 259 TYR TYR B . n A 1 260 ASN 260 260 260 ASN ASN B . n A 1 261 ALA 261 261 261 ALA ALA B . n A 1 262 GLN 262 262 262 GLN GLN B . n A 1 263 LYS 263 263 263 LYS LYS B . n A 1 264 MET 264 264 264 MET MET B . n A 1 265 ASP 265 265 265 ASP ASP B . n A 1 266 GLU 266 266 266 GLU GLU B . n A 1 267 LEU 267 267 267 LEU LEU B . n A 1 268 THR 268 268 268 THR THR B . n A 1 269 ARG 269 269 269 ARG ARG B . n A 1 270 VAL 270 270 270 VAL VAL B . n A 1 271 MET 271 271 271 MET MET B . n A 1 272 ARG 272 272 272 ARG ARG B . n A 1 273 LYS 273 273 273 LYS LYS B . n A 1 274 ILE 274 274 274 ILE ILE B . n A 1 275 CYS 275 275 275 CYS CYS B . n A 1 276 ASP 276 276 276 ASP ASP B . n A 1 277 ASP 277 277 277 ASP ASP B . n A 1 278 ASN 278 278 278 ASN ASN B . n A 1 279 PRO 279 279 279 PRO PRO B . n A 1 280 GLU 280 280 280 GLU GLU B . n A 1 281 TYR 281 281 281 TYR TYR B . n A 1 282 GLY 282 282 282 GLY GLY B . n A 1 283 GLU 283 283 283 GLU GLU B . n A 1 284 GLU 284 284 284 GLU GLU B . n A 1 285 MET 285 285 285 MET MET B . n A 1 286 VAL 286 286 286 VAL VAL B . n A 1 287 LEU 287 287 287 LEU LEU B . n A 1 288 ARG 288 288 288 ARG ARG B . n A 1 289 TRP 289 289 289 TRP TRP B . n A 1 290 ALA 290 290 290 ALA ALA B . n A 1 291 HIS 291 291 291 HIS HIS B . n A 1 292 GLY 292 292 292 GLY GLY B . n A 1 293 LEU 293 293 293 LEU LEU B . n A 1 294 SER 294 294 294 SER SER B . n A 1 295 VAL 295 295 295 VAL VAL B . n A 1 296 ASP 296 296 296 ASP ASP B . n A 1 297 PRO 297 297 297 PRO PRO B . n A 1 298 GLY 298 298 298 GLY GLY B . n A 1 299 ARG 299 299 299 ARG ARG B . n A 1 300 VAL 300 300 300 VAL VAL B . n A 1 301 PRO 301 301 301 PRO PRO B . n A 1 302 PHE 302 302 302 PHE PHE B . n A 1 303 LEU 303 303 303 LEU LEU B . n A 1 304 LEU 304 304 304 LEU LEU B . n A 1 305 ALA 305 305 305 ALA ALA B . n A 1 306 GLU 306 306 306 GLU GLU B . n A 1 307 LYS 307 307 307 LYS LYS B . n A 1 308 SER 308 308 308 SER SER B . n A 1 309 VAL 309 309 309 VAL VAL B . n A 1 310 VAL 310 310 310 VAL VAL B . n A 1 311 LEU 311 311 311 LEU LEU B . n A 1 312 GLY 312 312 312 GLY GLY B . n A 1 313 ARG 313 313 313 ARG ARG B . n A 1 314 GLN 314 314 314 GLN GLN B . n A 1 315 ILE 315 315 315 ILE ILE B . n A 1 316 ILE 316 316 316 ILE ILE B . n A 1 317 GLY 317 317 317 GLY GLY B . n A 1 318 ALA 318 318 318 ALA ALA B . n A 1 319 THR 319 319 319 THR THR B . n A 1 320 ASP 320 320 320 ASP ASP B . n A 1 321 THR 321 321 321 THR THR B . n A 1 322 ALA 322 322 322 ALA ALA B . n A 1 323 GLY 323 323 323 GLY GLY B . n A 1 324 VAL 324 324 324 VAL VAL B . n A 1 325 GLU 325 325 325 GLU GLU B . n A 1 326 ASP 326 326 326 ASP ASP B . n A 1 327 GLY 327 327 327 GLY GLY B . n A 1 328 VAL 328 328 328 VAL VAL B . n A 1 329 LYS 329 329 329 LYS LYS B . n A 1 330 ARG 330 330 330 ARG ARG B . n A 1 331 SER 331 331 331 SER SER B . n A 1 332 ASP 332 332 332 ASP ASP B . n A 1 333 MET 333 333 333 MET MET B . n A 1 334 ALA 334 334 334 ALA ALA B . n A 1 335 ALA 335 335 335 ALA ALA B . n A 1 336 GLN 336 336 336 GLN GLN B . n A 1 337 LEU 337 337 337 LEU LEU B . n A 1 338 SER 338 338 338 SER SER B . n A 1 339 PHE 339 339 339 PHE PHE B . n A 1 340 THR 340 340 340 THR THR B . n A 1 341 VAL 341 341 341 VAL VAL B . n A 1 342 PRO 342 342 342 PRO PRO B . n A 1 343 ILE 343 343 343 ILE ILE B . n A 1 344 PRO 344 344 344 PRO PRO B . n A 1 345 THR 345 345 345 THR THR B . n A 1 346 THR 346 346 346 THR THR B . n A 1 347 GLU 347 347 347 GLU GLU B . n A 1 348 LEU 348 348 348 LEU LEU B . n A 1 349 GLY 349 349 349 GLY GLY B . n A 1 350 GLY 350 350 350 GLY GLY B . n A 1 351 ILE 351 351 351 ILE ILE B . n A 1 352 ILE 352 352 352 ILE ILE B . n A 1 353 VAL 353 353 353 VAL VAL B . n A 1 354 THR 354 354 354 THR THR B . n A 1 355 PHE 355 355 355 PHE PHE B . n A 1 356 ALA 356 356 356 ALA ALA B . n A 1 357 CYS 357 357 357 CYS CYS B . n A 1 358 ILE 358 358 358 ILE ILE B . n A 1 359 LYS 359 359 359 LYS LYS B . n A 1 360 PRO 360 360 360 PRO PRO B . n A 1 361 ASP 361 361 361 ASP ASP B . n A 1 362 GLU 362 362 362 GLU GLU B . n A 1 363 THR 363 363 363 THR THR B . n A 1 364 LEU 364 364 364 LEU LEU B . n A 1 365 SER 365 365 365 SER SER B . n A 1 366 SER 366 366 366 SER SER B . n A 1 367 GLN 367 367 367 GLN GLN B . n A 1 368 PRO 368 368 368 PRO PRO B . n A 1 369 HIS 369 369 369 HIS HIS B . n A 1 370 PRO 370 370 370 PRO PRO B . n A 1 371 ILE 371 371 371 ILE ILE B . n A 1 372 LEU 372 372 372 LEU LEU B . n A 1 373 ALA 373 373 373 ALA ALA B . n A 1 374 ASP 374 374 374 ASP ASP B . n A 1 375 HIS 375 375 375 HIS HIS B . n A 1 376 TRP 376 376 376 TRP TRP B . n A 1 377 ARG 377 377 377 ARG ARG B . n A 1 378 LEU 378 378 378 LEU LEU B . n A 1 379 ASP 379 379 379 ASP ASP B . n A 1 380 ASN 380 380 380 ASN ASN B . n A 1 381 PHE 381 381 381 PHE PHE B . n A 1 382 VAL 382 382 382 VAL VAL B . n A 1 383 ALA 383 383 383 ALA ALA B . n A 1 384 ASP 384 384 384 ASP ASP B . n A 1 385 GLU 385 385 385 GLU GLU B . n A 1 386 LEU 386 386 386 LEU LEU B . n A 1 387 ALA 387 387 387 ALA ALA B . n A 1 388 LEU 388 388 388 LEU LEU B . n A 1 389 ASP 389 389 389 ASP ASP B . n A 1 390 PRO 390 390 390 PRO PRO B . n A 1 391 GLN 391 391 391 GLN GLN B . n A 1 392 PRO 392 392 392 PRO PRO B . n A 1 393 VAL 393 393 393 VAL VAL B . n A 1 394 MET 394 394 394 MET MET B . n A 1 395 ALA 395 395 395 ALA ALA B . n A 1 396 ARG 396 396 396 ARG ARG B . n A 1 397 GLU 397 397 397 GLU GLU B . n A 1 398 LEU 398 398 398 LEU LEU B . n A 1 399 ASP 399 399 399 ASP ASP B . n A 1 400 TYR 400 400 400 TYR TYR B . n A 1 401 LYS 401 401 401 LYS LYS B . n A 1 402 VAL 402 402 402 VAL VAL B . n A 1 403 ALA 403 403 403 ALA ALA B . n A 1 404 GLN 404 404 404 GLN GLN B . n A 1 405 ALA 405 405 405 ALA ALA B . n A 1 406 ASN 406 406 406 ASN ASN B . n A 1 407 GLU 407 407 407 GLU GLU B . n A 1 408 THR 408 408 408 THR THR B . n A 1 409 THR 409 409 409 THR THR B . n A 1 410 VAL 410 410 410 VAL VAL B . n A 1 411 VAL 411 411 411 VAL VAL B . n A 1 412 PHE 412 412 412 PHE PHE B . n A 1 413 TYR 413 413 413 TYR TYR B . n A 1 414 THR 414 414 414 THR THR B . n A 1 415 GLY 415 415 415 GLY GLY B . n A 1 416 LEU 416 416 416 LEU LEU B . n A 1 417 ASN 417 417 417 ASN ASN B . n A 1 418 GLU 418 418 418 GLU GLU B . n A 1 419 LEU 419 419 419 LEU LEU B . n A 1 420 LYS 420 420 420 LYS LYS B . n A 1 421 LYS 421 421 421 LYS LYS B . n A 1 422 THR 422 422 422 THR THR B . n A 1 423 TYR 423 423 423 TYR TYR B . n A 1 424 VAL 424 424 424 VAL VAL B . n A 1 425 SER 425 425 425 SER SER B . n A 1 426 TYR 426 426 426 TYR TYR B . n A 1 427 GLY 427 427 427 GLY GLY B . n A 1 428 LEU 428 428 428 LEU LEU B . n A 1 429 CYS 429 429 429 CYS CYS B . n A 1 430 ARG 430 430 430 ARG ARG B . n A 1 431 ALA 431 431 431 ALA ALA B . n A 1 432 LEU 432 432 432 LEU LEU B . n A 1 433 ASP 433 433 433 ASP ASP B . n A 1 434 PRO 434 434 434 PRO PRO B . n A 1 435 ASN 435 435 435 ASN ASN B . n A 1 436 THR 436 436 436 THR THR B . n A 1 437 VAL 437 437 437 VAL VAL B . n A 1 438 GLU 438 438 438 GLU GLU B . n A 1 439 SER 439 439 439 SER SER B . n A 1 440 LYS 440 440 440 LYS LYS B . n A 1 441 ASN 441 441 441 ASN ASN B . n A 1 442 ALA 442 442 442 ALA ALA B . n A 1 443 VAL 443 443 443 VAL VAL B . n A 1 444 TRP 444 444 444 TRP TRP B . n A 1 445 GLN 445 445 445 GLN GLN B . n A 1 446 LEU 446 446 446 LEU LEU B . n A 1 447 GLU 447 447 447 GLU GLU B . n A 1 448 VAL 448 448 448 VAL VAL B . n A 1 449 PRO 449 449 449 PRO PRO B . n A 1 450 LEU 450 450 450 LEU LEU B . n A 1 451 SER 451 451 451 SER SER B . n A 1 452 VAL 452 452 452 VAL VAL B . n A 1 453 THR 453 453 453 THR THR B . n A 1 454 PRO 454 454 454 PRO PRO B . n A 1 455 GLU 455 455 455 GLU GLU B . n A 1 456 THR 456 456 456 THR THR B . n A 1 457 VAL 457 457 457 VAL VAL B . n A 1 458 LEU 458 458 458 LEU LEU B . n A 1 459 TYR 459 459 459 TYR TYR B . n A 1 460 PRO 460 460 460 PRO PRO B . n A 1 461 ALA 461 461 461 ALA ALA B . n A 1 462 ASP 462 462 462 ASP ASP B . n A 1 463 LEU 463 463 463 LEU LEU B . n A 1 464 PRO 464 464 464 PRO PRO B . n A 1 465 GLN 465 465 465 GLN GLN B . n A 1 466 TYR 466 466 466 TYR TYR B . n A 1 467 PRO 467 467 467 PRO PRO B . n A 1 468 PHE 468 468 468 PHE PHE B . n A 1 469 ALA 469 469 469 ALA ALA B . n A 1 470 ASP 470 470 470 ASP ASP B . n A 1 471 GLN 471 471 471 GLN GLN B . n A 1 472 GLN 472 472 472 GLN GLN B . n A 1 473 ALA 473 473 473 ALA ALA B . n A 1 474 GLU 474 474 474 GLU GLU B . n A 1 475 VAL 475 475 475 VAL VAL B . n A 1 476 CYS 476 476 476 CYS CYS B . n A 1 477 THR 477 477 477 THR THR B . n A 1 478 TYR 478 478 478 TYR TYR B . n A 1 479 VAL 479 479 479 VAL VAL B . n A 1 480 VAL 480 480 480 VAL VAL B . n A 1 481 GLN 481 481 481 GLN GLN B . n A 1 482 SER 482 482 482 SER SER B . n A 1 483 THR 483 483 483 THR THR B . n A 1 484 ALA 484 484 484 ALA ALA B . n A 1 485 VAL 485 485 485 VAL VAL B . n A 1 486 MET 486 486 486 MET MET B . n A 1 487 PRO 487 487 487 PRO PRO B . n A 1 488 THR 488 488 488 THR THR B . n A 1 489 PRO 489 489 489 PRO PRO B . n A 1 490 MET 490 490 490 MET MET B . n A 1 491 ILE 491 491 491 ILE ILE B . n A 1 492 PHE 492 492 492 PHE PHE B . n A 1 493 GLY 493 493 493 GLY GLY B . n A 1 494 PRO 494 494 494 PRO PRO B . n A 1 495 SER 495 495 495 SER SER B . n A 1 496 PRO 496 496 496 PRO PRO B . n A 1 497 VAL 497 497 497 VAL VAL B . n A 1 498 GLU 498 498 498 GLU GLU B . n A 1 499 GLN 499 499 499 GLN GLN B . n A 1 500 LEU 500 500 500 LEU LEU B . n A 1 501 ALA 501 501 501 ALA ALA B . n A 1 502 VAL 502 502 502 VAL VAL B . n A 1 503 ILE 503 503 503 ILE ILE B . n A 1 504 GLU 504 504 504 GLU GLU B . n A 1 505 THR 505 505 505 THR THR B . n A 1 506 GLU 506 506 506 GLU GLU B . n A 1 507 ASP 507 507 507 ASP ASP B . n A 1 508 LEU 508 508 508 LEU LEU B . n A 1 509 PHE 509 509 509 PHE PHE B . n A 1 510 GLU 510 510 510 GLU GLU B . n A 1 511 ASP 511 511 ? ? ? B . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B MET 191 ? CG ? A MET 191 CG 2 1 Y 1 B MET 191 ? SD ? A MET 191 SD 3 1 Y 1 B MET 191 ? CE ? A MET 191 CE # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9FFH _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FFH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FFH _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9FFH _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 35420 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.618 ? 48280 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 11.657 ? 13250 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.046 ? 5610 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 6380 ? f_plane_restr ? ? # _struct.entry_id 9FFH _struct.title 'Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FFH _struct_keywords.text 'ssDNA virus, Microviridae, Tainavirinae, Alphaproteobacteria, Rhodobacter capsulatus, aquatic virus, jelly-roll fold, VIRUS' _struct_keywords.pdbx_keywords VIRUS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9FFH _struct_ref.pdbx_db_accession 9FFH _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9FFH _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 511 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9FFH _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 511 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 511 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 1 2 A 1 3 A 1 4 A 1 5 A 1 6 A 1 7 A 1 8 A 1 9 A 1 10 A 1 11 A 1 12 A 1 13 A 1 14 A 1 15 A 1 16 A 1 17 A 1 18 A 1 19 A 1 20 A 1 21 A 1 22 A 1 23 A 1 24 A 1 25 A 1 26 A 1 27 A 1 28 A 1 29 A 1 30 A 1 31 A 1 32 A 1 33 A 1 34 A 1 35 A 1 36 A 1 37 A 1 38 A 1 39 A 1 40 A 1 41 A 1 42 A 1 43 A 1 44 A 1 45 A 1 46 A 1 47 A 1 48 A 1 49 A 1 50 A 1 51 A 1 52 A 1 53 A 1 54 A 1 55 A 1 56 A 1 57 A 1 58 A 1 59 A 1 60 A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? -0.13819660 0.42532540 0.89442719 -39.21609471 -0.95105652 -0.30901699 -0.00000000 488.17587830 0.27639320 -0.85065081 0.44721360 243.44150629 3 'point symmetry operation' ? ? -0.13819660 -0.95105652 0.27639320 391.57774168 0.42532540 -0.30901699 -0.85065081 374.61795809 0.89442719 -0.00000000 0.44721360 -73.79440988 4 'point symmetry operation' ? ? -0.44721360 0.00000000 0.89442719 119.40186337 0.00000000 -1.00000000 0.00000000 432.00000000 0.89442719 0.00000000 0.44721360 -73.79440988 5 'point symmetry operation' ? ? 0.30901699 -0.95105652 -0.00000000 354.68053673 0.95105652 0.30901699 0.00000000 -56.17587830 0.00000000 -0.00000000 1.00000000 0.00000000 6 'point symmetry operation' ? ? 0.86180340 0.42532540 0.27639320 -121.72075315 -0.42532540 0.30901699 0.85065081 57.38204191 0.27639320 -0.85065081 0.44721360 243.44150629 7 'point symmetry operation' ? ? 0.36180340 0.26286556 0.89442719 -112.12476752 -0.58778525 0.80901699 0.00000000 168.21394371 -0.72360680 -0.52573111 0.44721360 389.25885190 8 'point symmetry operation' ? ? -0.05278640 -0.68819096 0.72360680 219.75204247 -0.68819096 -0.50000000 -0.52573111 586.20716763 0.72360680 -0.52573111 -0.44721360 269.85698853 9 'point symmetry operation' ? ? 0.86180340 -0.42532540 0.27639320 62.01982146 0.42532540 0.30901699 -0.85065081 241.12261652 0.27639320 0.85065081 0.44721360 -124.03964292 10 'point symmetry operation' ? ? 0.63819660 -0.26286556 0.72360680 -21.37057405 0.26286556 -0.80901699 -0.52573111 447.52663089 0.72360680 0.52573111 -0.44721360 42.74114810 11 'point symmetry operation' ? ? 0.36180340 -0.26286556 0.89442719 1.43315270 0.58778525 0.80901699 0.00000000 -85.70928528 -0.72360680 0.52573111 0.44721360 162.14301147 12 'point symmetry operation' ? ? 0.44721360 -0.52573111 0.72360680 76.66071528 -0.85065081 0.00000000 0.52573111 286.18265439 -0.27639320 -0.85065081 -0.44721360 556.03964292 13 'point symmetry operation' ? ? -0.67082039 -0.16245985 0.72360680 239.68946382 -0.68819096 0.50000000 -0.52573111 370.20716763 -0.27639320 -0.85065081 -0.44721360 556.03964292 14 'point symmetry operation' ? ? 0.44721360 -0.85065081 -0.27639320 362.84336966 -0.52573111 0.00000000 -0.85065081 513.29849482 0.72360680 0.52573111 -0.44721360 42.74114810 15 'point symmetry operation' ? ? 0.67082039 0.68819096 0.27639320 -137.24738404 -0.16245985 0.50000000 -0.85065081 326.83190180 -0.72360680 0.52573111 0.44721360 162.14301147 16 'point symmetry operation' ? ? -0.36180340 0.58778525 0.72360680 10.88885135 0.26286556 0.80901699 -0.52573111 98.03128932 -0.89442719 0.00000000 -0.44721360 505.79440988 17 'point symmetry operation' ? ? 0.94721360 0.16245985 -0.27639320 36.01146786 -0.16245985 -0.50000000 -0.85065081 542.83190180 -0.27639320 0.85065081 -0.44721360 188.55849371 18 'point symmetry operation' ? ? -0.30901699 -0.95105652 0.00000000 488.17587830 -0.95105652 0.30901699 -0.00000000 354.68053673 -0.00000000 -0.00000000 -1.00000000 432.00000000 19 'point symmetry operation' ? ? -0.67082039 -0.68819096 -0.27639320 569.24738404 -0.16245985 0.50000000 -0.85065081 326.83190180 0.72360680 -0.52573111 -0.44721360 269.85698853 20 'point symmetry operation' ? ? 0.67082039 0.16245985 -0.72360680 192.31053618 -0.68819096 0.50000000 -0.52573111 370.20716763 0.27639320 0.85065081 0.44721360 -124.03964292 21 'point symmetry operation' ? ? -0.44721360 0.85065081 0.27639320 69.15663034 -0.52573111 0.00000000 -0.85065081 513.29849482 -0.72360680 -0.52573111 0.44721360 389.25885190 22 'point symmetry operation' ? ? 0.05278640 0.68819096 -0.72360680 212.24795753 -0.68819096 -0.50000000 -0.52573111 586.20716763 -0.72360680 0.52573111 0.44721360 162.14301147 23 'point symmetry operation' ? ? -0.86180340 0.42532540 -0.27639320 369.98017854 0.42532540 0.30901699 -0.85065081 241.12261652 -0.27639320 -0.85065081 -0.44721360 556.03964292 24 'point symmetry operation' ? ? -0.36180340 -0.26286556 -0.89442719 544.12476752 -0.58778525 0.80901699 0.00000000 168.21394371 0.72360680 0.52573111 -0.44721360 42.74114810 25 'point symmetry operation' ? ? 0.36180340 -0.58778525 -0.72360680 421.11114865 0.26286556 0.80901699 -0.52573111 98.03128932 0.89442719 -0.00000000 0.44721360 -73.79440988 26 'point symmetry operation' ? ? 0.30901699 0.95105652 -0.00000000 -56.17587830 -0.95105652 0.30901699 -0.00000000 354.68053673 0.00000000 0.00000000 1.00000000 0.00000000 27 'point symmetry operation' ? ? -0.94721360 -0.16245985 0.27639320 395.98853214 -0.16245985 -0.50000000 -0.85065081 542.83190180 0.27639320 -0.85065081 0.44721360 243.44150629 28 'point symmetry operation' ? ? -0.80901699 0.58778525 -0.00000000 263.78605629 -0.58778525 -0.80901699 0.00000000 517.70928528 0.00000000 0.00000000 1.00000000 0.00000000 29 'point symmetry operation' ? ? -0.44721360 -0.52573111 -0.72360680 582.45512516 0.85065081 0.00000000 -0.52573111 145.81734561 0.27639320 -0.85065081 0.44721360 243.44150629 30 'point symmetry operation' ? ? 0.36180340 0.58778525 -0.72360680 167.18791966 -0.26286556 0.80901699 0.52573111 -15.52663089 0.89442719 0.00000000 0.44721360 -73.79440988 31 'point symmetry operation' ? ? 0.44721360 0.00000000 -0.89442719 312.59813663 0.00000000 -1.00000000 0.00000000 432.00000000 -0.89442719 0.00000000 -0.44721360 505.79440988 32 'point symmetry operation' ? ? -0.30901699 0.95105652 0.00000000 77.31946327 0.95105652 0.30901699 0.00000000 -56.17587830 -0.00000000 0.00000000 -1.00000000 432.00000000 33 'point symmetry operation' ? ? -0.86180340 -0.42532540 -0.27639320 553.72075315 -0.42532540 0.30901699 0.85065081 57.38204191 -0.27639320 0.85065081 -0.44721360 188.55849371 34 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 432.00000000 0.00000000 1.00000000 0.00000000 0.00000000 -0.00000000 0.00000000 -1.00000000 432.00000000 35 'point symmetry operation' ? ? 0.13819660 -0.42532540 -0.89442719 471.21609471 -0.95105652 -0.30901699 -0.00000000 488.17587830 -0.27639320 0.85065081 -0.44721360 188.55849371 36 'point symmetry operation' ? ? 0.13819660 0.95105652 -0.27639320 40.42225832 0.42532540 -0.30901699 -0.85065081 374.61795809 -0.89442719 0.00000000 -0.44721360 505.79440988 37 'point symmetry operation' ? ? 0.80901699 0.58778525 0.00000000 -85.70928528 0.58778525 -0.80901699 0.00000000 263.78605629 0.00000000 0.00000000 -1.00000000 432.00000000 38 'point symmetry operation' ? ? -0.67082039 0.16245985 0.72360680 169.50680943 0.68819096 0.50000000 0.52573111 -154.20716763 -0.27639320 0.85065081 -0.44721360 188.55849371 39 'point symmetry operation' ? ? 0.13819660 -0.95105652 -0.27639320 451.27867336 -0.42532540 -0.30901699 0.85065081 190.87738348 -0.89442719 -0.00000000 -0.44721360 505.79440988 40 'point symmetry operation' ? ? -0.36180340 -0.58778525 0.72360680 264.81208034 -0.26286556 0.80901699 0.52573111 -15.52663089 -0.89442719 -0.00000000 -0.44721360 505.79440988 41 'point symmetry operation' ? ? 0.80901699 -0.58778525 0.00000000 168.21394371 -0.58778525 -0.80901699 0.00000000 517.70928528 0.00000000 -0.00000000 -1.00000000 432.00000000 42 'point symmetry operation' ? ? 0.44721360 0.52573111 0.72360680 -150.45512516 0.85065081 0.00000000 -0.52573111 145.81734561 -0.27639320 0.85065081 -0.44721360 188.55849371 43 'point symmetry operation' ? ? -0.05278640 0.68819096 0.72360680 -77.54645235 0.68819096 -0.50000000 0.52573111 61.79283237 0.72360680 0.52573111 -0.44721360 42.74114810 44 'point symmetry operation' ? ? -0.44721360 -0.85065081 0.27639320 436.63777955 0.52573111 0.00000000 0.85065081 -81.29849482 -0.72360680 0.52573111 0.44721360 162.14301147 45 'point symmetry operation' ? ? 0.94721360 -0.16245985 -0.27639320 106.19412225 0.16245985 -0.50000000 0.85065081 105.16809820 -0.27639320 -0.85065081 -0.44721360 556.03964292 46 'point symmetry operation' ? ? 0.67082039 -0.68819096 0.27639320 160.05111078 0.16245985 0.50000000 0.85065081 -110.83190180 -0.72360680 -0.52573111 0.44721360 389.25885190 47 'point symmetry operation' ? ? 0.63819660 0.26286556 0.72360680 -134.92849427 -0.26286556 -0.80901699 0.52573111 333.96871068 0.72360680 -0.52573111 -0.44721360 269.85698853 48 'point symmetry operation' ? ? -0.13819660 -0.42532540 0.89442719 144.52447989 0.95105652 -0.30901699 0.00000000 77.31946327 0.27639320 0.85065081 0.44721360 -124.03964292 49 'point symmetry operation' ? ? -0.94721360 0.16245985 0.27639320 325.80587775 0.16245985 -0.50000000 0.85065081 105.16809820 0.27639320 0.85065081 0.44721360 -124.03964292 50 'point symmetry operation' ? ? 0.05278640 -0.68819096 -0.72360680 509.54645235 0.68819096 -0.50000000 0.52573111 61.79283237 -0.72360680 -0.52573111 0.44721360 389.25885190 51 'point symmetry operation' ? ? 0.44721360 0.85065081 -0.27639320 -4.63777955 0.52573111 0.00000000 0.85065081 -81.29849482 0.72360680 -0.52573111 -0.44721360 269.85698853 52 'point symmetry operation' ? ? 0.67082039 -0.16245985 -0.72360680 262.49319057 0.68819096 0.50000000 0.52573111 -154.20716763 0.27639320 -0.85065081 0.44721360 243.44150629 53 'point symmetry operation' ? ? -0.13819660 0.95105652 0.27639320 -19.27867336 -0.42532540 -0.30901699 0.85065081 190.87738348 0.89442719 0.00000000 0.44721360 -73.79440988 54 'point symmetry operation' ? ? -0.80901699 -0.58778525 -0.00000000 517.70928528 0.58778525 -0.80901699 0.00000000 263.78605629 0.00000000 -0.00000000 1.00000000 0.00000000 55 'point symmetry operation' ? ? -0.63819660 -0.26286556 -0.72360680 566.92849427 -0.26286556 -0.80901699 0.52573111 333.96871068 -0.72360680 0.52573111 0.44721360 162.14301147 56 'point symmetry operation' ? ? 0.13819660 0.42532540 -0.89442719 287.47552011 0.95105652 -0.30901699 0.00000000 77.31946327 -0.27639320 -0.85065081 -0.44721360 556.03964292 57 'point symmetry operation' ? ? -0.67082039 0.68819096 -0.27639320 271.94888922 0.16245985 0.50000000 0.85065081 -110.83190180 0.72360680 0.52573111 -0.44721360 42.74114810 58 'point symmetry operation' ? ? -0.36180340 0.26286556 -0.89442719 430.56684730 0.58778525 0.80901699 0.00000000 -85.70928528 0.72360680 -0.52573111 -0.44721360 269.85698853 59 'point symmetry operation' ? ? -0.63819660 0.26286556 -0.72360680 453.37057405 0.26286556 -0.80901699 -0.52573111 447.52663089 -0.72360680 -0.52573111 0.44721360 389.25885190 60 'point symmetry operation' ? ? -0.44721360 0.52573111 -0.72360680 355.33928472 -0.85065081 0.00000000 0.52573111 286.18265439 0.27639320 0.85065081 0.44721360 -124.03964292 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 71 ? ASN A 79 ? VAL B 71 ASN B 79 1 ? 9 HELX_P HELX_P2 AA2 MET A 87 ? SER A 97 ? MET B 87 SER B 97 1 ? 11 HELX_P HELX_P3 AA3 THR A 108 ? GLY A 115 ? THR B 108 GLY B 115 1 ? 8 HELX_P HELX_P4 AA4 GLU A 129 ? TYR A 147 ? GLU B 129 TYR B 147 1 ? 19 HELX_P HELX_P5 AA5 THR A 168 ? ASN A 174 ? THR B 168 ASN B 174 1 ? 7 HELX_P HELX_P6 AA6 LYS A 263 ? CYS A 275 ? LYS B 263 CYS B 275 1 ? 13 HELX_P HELX_P7 AA7 GLU A 284 ? GLY A 292 ? GLU B 284 GLY B 292 1 ? 9 HELX_P HELX_P8 AA8 ASP A 320 ? GLY A 327 ? ASP B 320 GLY B 327 1 ? 8 HELX_P HELX_P9 AA9 ASN A 380 ? ALA A 387 ? ASN B 380 ALA B 387 1 ? 8 HELX_P HELX_P10 AB1 MET A 394 ? LEU A 398 ? MET B 394 LEU B 398 5 ? 5 HELX_P HELX_P11 AB2 GLN A 404 ? THR A 408 ? GLN B 404 THR B 408 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 3 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 8 ? PHE A 20 ? ASN B 8 PHE B 20 AA1 2 CYS A 476 ? THR A 488 ? CYS B 476 THR B 488 AA1 3 MET A 40 ? LEU A 49 ? MET B 40 LEU B 49 AA1 4 ALA A 334 ? PRO A 342 ? ALA B 334 PRO B 342 AA2 1 THR A 161 ? PRO A 162 ? THR B 161 PRO B 162 AA2 2 LYS A 24 ? VAL A 33 ? LYS B 24 VAL B 33 AA2 3 GLY A 350 ? PRO A 360 ? GLY B 350 PRO B 360 AA2 4 ILE A 60 ? PRO A 70 ? ILE B 60 PRO B 70 AA2 5 PHE A 302 ? LYS A 307 ? PHE B 302 LYS B 307 AA3 1 ILE A 52 ? ALA A 53 ? ILE B 52 ALA B 53 AA3 2 LYS A 329 ? ASP A 332 ? LYS B 329 ASP B 332 AA3 3 GLN A 314 ? GLY A 317 ? GLN B 314 GLY B 317 AA4 1 LEU A 104 ? GLU A 105 ? LEU B 104 GLU B 105 AA4 2 LEU A 124 ? ASN A 128 ? LEU B 124 ASN B 128 AA4 3 ARG A 119 ? ASN A 121 ? ARG B 119 ASN B 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 10 ? N ARG B 10 O MET A 486 ? O MET B 486 AA1 2 3 O THR A 483 ? O THR B 483 N SER A 42 ? N SER B 42 AA1 3 4 N VAL A 45 ? N VAL B 45 O LEU A 337 ? O LEU B 337 AA2 1 2 O THR A 161 ? O THR B 161 N LEU A 25 ? N LEU B 25 AA2 2 3 N MET A 29 ? N MET B 29 O THR A 354 ? O THR B 354 AA2 3 4 O ILE A 351 ? O ILE B 351 N VAL A 69 ? N VAL B 69 AA2 4 5 N ALA A 66 ? N ALA B 66 O LEU A 304 ? O LEU B 304 AA3 1 2 N ILE A 52 ? N ILE B 52 O SER A 331 ? O SER B 331 AA3 2 3 O ASP A 332 ? O ASP B 332 N GLN A 314 ? N GLN B 314 AA4 1 2 N GLU A 105 ? N GLU B 105 O VAL A 127 ? O VAL B 127 AA4 2 3 O LEU A 124 ? O LEU B 124 N ASN A 121 ? N ASN B 121 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ALA _pdbx_validate_close_contact.auth_seq_id_1 501 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG1 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 505 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS B 158 ? ? -140.18 33.34 2 1 MET B 191 ? ? -157.56 70.20 3 1 SER B 254 ? ? 70.37 149.08 4 1 THR B 256 ? ? 175.33 -45.00 5 1 PHE B 258 ? ? 75.93 -11.95 6 1 GLN B 262 ? ? 76.88 -5.01 7 1 LYS B 401 ? ? -97.35 33.65 8 1 LEU B 419 ? ? 78.98 -2.87 9 1 LEU B 450 ? ? 65.59 -173.84 10 1 SER B 451 ? ? 60.15 -74.93 11 1 PHE B 492 ? ? 58.97 -164.66 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9FFH _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details 'Related entry - empty capsid' _em_3d_fitting_list.chain_id A _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name Other _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 9FFH _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.2 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 4935 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.75 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.name 'Rhodobacter phage Ebor' _em_entity_assembly.details 'purified from Rhodobacter capsulatus strain SB1003 by CsCl ultracentrifugation' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9FFH _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate OTHER _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped NO _em_virus_entity.empty NO _em_virus_entity.details ? # _em_vitrification.entry_id 9FFH _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details 'blot time 2 sec, blot force 0, wait time 8 sec' # _em_experiment.entry_id 9FFH _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9FFH _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B SER 2 ? A SER 2 3 1 Y 1 B ASP 193 ? A ASP 193 4 1 Y 1 B MET 194 ? A MET 194 5 1 Y 1 B ARG 195 ? A ARG 195 6 1 Y 1 B LEU 196 ? A LEU 196 7 1 Y 1 B PRO 197 ? A PRO 197 8 1 Y 1 B VAL 198 ? A VAL 198 9 1 Y 1 B ALA 199 ? A ALA 199 10 1 Y 1 B SER 200 ? A SER 200 11 1 Y 1 B ASP 201 ? A ASP 201 12 1 Y 1 B ALA 202 ? A ALA 202 13 1 Y 1 B GLU 203 ? A GLU 203 14 1 Y 1 B LYS 204 ? A LYS 204 15 1 Y 1 B ALA 205 ? A ALA 205 16 1 Y 1 B VAL 206 ? A VAL 206 17 1 Y 1 B THR 207 ? A THR 207 18 1 Y 1 B ALA 208 ? A ALA 208 19 1 Y 1 B PRO 209 ? A PRO 209 20 1 Y 1 B LEU 210 ? A LEU 210 21 1 Y 1 B THR 211 ? A THR 211 22 1 Y 1 B VAL 212 ? A VAL 212 23 1 Y 1 B LYS 213 ? A LYS 213 24 1 Y 1 B ARG 214 ? A ARG 214 25 1 Y 1 B GLY 215 ? A GLY 215 26 1 Y 1 B ASN 216 ? A ASN 216 27 1 Y 1 B GLU 217 ? A GLU 217 28 1 Y 1 B ASN 218 ? A ASN 218 29 1 Y 1 B ARG 219 ? A ARG 219 30 1 Y 1 B ARG 220 ? A ARG 220 31 1 Y 1 B LEU 221 ? A LEU 221 32 1 Y 1 B ASP 222 ? A ASP 222 33 1 Y 1 B ALA 223 ? A ALA 223 34 1 Y 1 B GLY 224 ? A GLY 224 35 1 Y 1 B ILE 225 ? A ILE 225 36 1 Y 1 B SER 226 ? A SER 226 37 1 Y 1 B ARG 227 ? A ARG 227 38 1 Y 1 B LEU 228 ? A LEU 228 39 1 Y 1 B ALA 229 ? A ALA 229 40 1 Y 1 B ALA 230 ? A ALA 230 41 1 Y 1 B ALA 231 ? A ALA 231 42 1 Y 1 B GLU 232 ? A GLU 232 43 1 Y 1 B VAL 233 ? A VAL 233 44 1 Y 1 B ALA 234 ? A ALA 234 45 1 Y 1 B ALA 235 ? A ALA 235 46 1 Y 1 B ALA 236 ? A ALA 236 47 1 Y 1 B THR 237 ? A THR 237 48 1 Y 1 B ASP 238 ? A ASP 238 49 1 Y 1 B ALA 239 ? A ALA 239 50 1 Y 1 B ALA 240 ? A ALA 240 51 1 Y 1 B LEU 241 ? A LEU 241 52 1 Y 1 B TYR 242 ? A TYR 242 53 1 Y 1 B ALA 243 ? A ALA 243 54 1 Y 1 B VAL 244 ? A VAL 244 55 1 Y 1 B PHE 245 ? A PHE 245 56 1 Y 1 B GLY 246 ? A GLY 246 57 1 Y 1 B GLY 247 ? A GLY 247 58 1 Y 1 B ARG 248 ? A ARG 248 59 1 Y 1 B GLU 249 ? A GLU 249 60 1 Y 1 B ASP 511 ? A ASP 511 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-05-23 _em_admin.deposition_site PDBE _em_admin.entry_id 9FFH _em_admin.last_update 2024-07-10 _em_admin.map_release_date 2024-06-12 _em_admin.title 'Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM ? 1 Tris-HCl 1 100 mM NaCl 2 'sodium chloride' 1 5 mM CaCl2 3 'calcium chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 5.7 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 3144506 _em_entity_assembly_naturalsource.organism 'Rhodobacter phage Ebor' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain 'variant R120' _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 996 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 5271 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 3.1 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot 0.9.8.5 OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? RELION 3.1 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 3.1 CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? RELION 3.1. 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.20.1 # _em_specimen.concentration ? _em_specimen.details 'concentration between 10^10-11 PFU/ml' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 1061 _em_virus_natural_host.organism 'Rhodobacter capsulatus' _em_virus_natural_host.strain SB1003 # _em_virus_shell.diameter 460 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.id 1 _em_virus_shell.name 'Native capsid' _em_virus_shell.triangulation 1 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' 224067/Z/21/Z 1 'Wellcome Trust' 'United Kingdom' 206377 2 'Wellcome Trust' 'United Kingdom' 109363/Z/15/A 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 9FFH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_