HEADER LYASE 28-MAY-24 9FI0 TITLE BACTEROIDES OVATUS POLYSACCHARIDE LYASE FAMILY 38 (BOPL38) MUTANT TITLE 2 D108N COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE LYASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 28116; SOURCE 4 STRAIN: CP926; SOURCE 5 GENE: F3B53_17925, F3D71_22350; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLYSACCHARIDE LYASE, ALGINATE, MUTANT, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.TANDRUP,C.WILKENS REVDAT 2 16-JUL-25 9FI0 1 JRNL REVDAT 1 09-JUL-25 9FI0 0 JRNL AUTH T.TANDRUP,J.P.RIVAS-FERNANDEZ,M.MADSEN,M.E.RONNE, JRNL AUTH 2 A.B PETERSEN,L.J.KLAU,A.TONDERVIK,C.WILKENS,F.L.AACHMANN, JRNL AUTH 3 C.ROVIRA,B.SVENSSON JRNL TITL THE SWISS ARMY KNIFE OF ALGINATE METABOLISM: MECHANISTIC JRNL TITL 2 ANALYSIS OF A MIXED-FUNCTION POLYSACCHARIDE LYASE/EPIMERASE JRNL TITL 3 OF THE HUMAN GUT MICROBIOTA. JRNL REF J.AM.CHEM.SOC. V. 147 23594 2025 JRNL REFN ESSN 1520-5126 JRNL PMID 40570315 JRNL DOI 10.1021/JACS.5C03557 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR., SECT. D: V. 75 861 2019 REMARK 1 REF 2 BIOL. CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 73816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 3607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4900 - 5.5100 0.99 2900 153 0.1784 0.1654 REMARK 3 2 5.5000 - 4.3700 1.00 2802 122 0.1502 0.1778 REMARK 3 3 4.3700 - 3.8200 1.00 2747 157 0.1553 0.1679 REMARK 3 4 3.8200 - 3.4700 1.00 2729 137 0.1811 0.2273 REMARK 3 5 3.4700 - 3.2200 1.00 2708 136 0.1959 0.2320 REMARK 3 6 3.2200 - 3.0300 1.00 2687 170 0.2063 0.2164 REMARK 3 7 3.0300 - 2.8800 1.00 2731 122 0.2177 0.2244 REMARK 3 8 2.8800 - 2.7600 1.00 2695 139 0.1953 0.2758 REMARK 3 9 2.7500 - 2.6500 1.00 2727 142 0.1913 0.2130 REMARK 3 10 2.6500 - 2.5600 1.00 2665 140 0.1915 0.2106 REMARK 3 11 2.5600 - 2.4800 1.00 2700 132 0.1908 0.2306 REMARK 3 12 2.4800 - 2.4100 1.00 2682 138 0.1993 0.2407 REMARK 3 13 2.4100 - 2.3400 1.00 2719 137 0.2022 0.2601 REMARK 3 14 2.3400 - 2.2900 1.00 2632 152 0.2134 0.2527 REMARK 3 15 2.2900 - 2.2300 1.00 2713 118 0.2343 0.2784 REMARK 3 16 2.2300 - 2.1900 1.00 2634 146 0.2080 0.2740 REMARK 3 17 2.1900 - 2.1400 1.00 2687 139 0.2103 0.2393 REMARK 3 18 2.1400 - 2.1000 1.00 2667 139 0.2080 0.2646 REMARK 3 19 2.1000 - 2.0600 1.00 2704 127 0.2058 0.2320 REMARK 3 20 2.0600 - 2.0300 1.00 2650 131 0.2175 0.2568 REMARK 3 21 2.0300 - 2.0000 1.00 2687 153 0.2183 0.2803 REMARK 3 22 2.0000 - 1.9700 1.00 2634 115 0.2416 0.2705 REMARK 3 23 1.9700 - 1.9400 1.00 2687 150 0.2699 0.3107 REMARK 3 24 1.9400 - 1.9100 1.00 2685 132 0.2800 0.3081 REMARK 3 25 1.9100 - 1.8800 1.00 2634 134 0.3531 0.4043 REMARK 3 26 1.8800 - 1.8600 1.00 2703 146 0.3662 0.4185 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.245 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.876 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6425 REMARK 3 ANGLE : 0.873 8735 REMARK 3 CHIRALITY : 0.049 930 REMARK 3 PLANARITY : 0.016 1119 REMARK 3 DIHEDRAL : 16.029 2462 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9FI0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292137868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : XSCALE JAN 10, 2022 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73835 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 48.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.21_5207 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% (W/V) PEG3350, 0.2 M (NH4)2SO4 AND REMARK 280 0.1 M CITRIC ACID PH 3.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.36900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.24300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.36900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.24300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 LYS A 404 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 HIS B 20 REMARK 465 MET B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 LYS B 404 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 194 O HOH A 501 1.89 REMARK 500 O HOH A 611 O HOH A 700 2.09 REMARK 500 O ALA A 268 O HOH A 502 2.11 REMARK 500 O HOH B 508 O HOH B 637 2.13 REMARK 500 OH TYR B 118 O HOH B 501 2.17 REMARK 500 O SER A 79 O HOH A 503 2.17 REMARK 500 O LYS A 275 O HOH A 504 2.19 REMARK 500 NZ LYS B 200 O HOH B 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 191 CG - CD - NE ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 103 91.80 -63.53 REMARK 500 ASN A 241 -169.41 -160.51 REMARK 500 ALA A 331 -35.54 66.53 REMARK 500 TYR A 398 43.84 -100.68 REMARK 500 PRO B 103 89.19 -62.42 REMARK 500 SER B 271 -52.37 -124.30 REMARK 500 TYR B 398 47.08 -100.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 194 0.23 SIDE CHAIN REMARK 500 ARG B 191 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 728 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A 729 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 730 DISTANCE = 9.82 ANGSTROMS DBREF1 9FI0 A 24 404 UNP A0A5M5BWR5_BACOV DBREF2 9FI0 A A0A5M5BWR5 20 400 DBREF1 9FI0 B 24 404 UNP A0A5M5BWR5_BACOV DBREF2 9FI0 B A0A5M5BWR5 20 400 SEQADV 9FI0 MET A 1 UNP A0A5M5BWR INITIATING METHIONINE SEQADV 9FI0 GLY A 2 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 3 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 4 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 5 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 6 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 7 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 8 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 9 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 10 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 11 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 12 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 GLY A 13 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 LEU A 14 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 VAL A 15 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 PRO A 16 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ARG A 17 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 GLY A 18 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 19 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS A 20 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 MET A 21 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ALA A 22 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER A 23 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ASN A 108 UNP A0A5M5BWR ASP 104 ENGINEERED MUTATION SEQADV 9FI0 MET B 1 UNP A0A5M5BWR INITIATING METHIONINE SEQADV 9FI0 GLY B 2 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 3 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 4 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 5 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 6 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 7 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 8 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 9 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 10 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 11 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 12 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 GLY B 13 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 LEU B 14 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 VAL B 15 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 PRO B 16 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ARG B 17 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 GLY B 18 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 19 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 HIS B 20 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 MET B 21 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ALA B 22 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 SER B 23 UNP A0A5M5BWR EXPRESSION TAG SEQADV 9FI0 ASN B 108 UNP A0A5M5BWR ASP 104 ENGINEERED MUTATION SEQRES 1 A 404 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 404 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA PRO LEU SEQRES 3 A 404 GLY PRO PHE ASN ALA THR LEU LEU GLU GLN LEU LYS ASN SEQRES 4 A 404 ASP TYR GLN LYS GLY GLU LYS GLU VAL THR ARG TYR ILE SEQRES 5 A 404 GLU LEU GLN GLU LYS VAL ALA GLU LYS TYR ILE LYS MET SEQRES 6 A 404 THR PRO LEU SER VAL THR ALA LYS LYS LYS LEU PRO PRO SEQRES 7 A 404 SER LYS ASP PRO ARG ASP TYR MET THR LEU SER PRO TYR SEQRES 8 A 404 TRP TRP PRO ASP SER THR LYS ILE ASP GLY LEU PRO TYR SEQRES 9 A 404 ILE ARG LYS ASN GLY GLU ARG ASN PRO GLU VAL TYR GLU SEQRES 10 A 404 TYR PRO GLU ARG GLU ASN ALA ASN ARG PHE GLY ASP ALA SEQRES 11 A 404 ALA TYR CYS LEU GLY VAL LEU TYR TYR ILE THR GLY LYS SEQRES 12 A 404 GLU VAL TYR ALA LYS ALA CYS ALA ASN HIS LEU ARG THR SEQRES 13 A 404 TRP PHE THR ASP PRO LYS LEU GLY MET ASN PRO ASN MET SEQRES 14 A 404 THR TYR ALA GLN ALA VAL PRO GLY MET LYS LYS MET ARG SEQRES 15 A 404 GLY SER GLY PHE ILE ASP SER ARG ARG PHE SER ARG ALA SEQRES 16 A 404 LEU GLY VAL ALA LYS LEU ILE GLU GLY SER LYS SER TRP SEQRES 17 A 404 THR PRO SER ASP LYS LYS LYS LEU ASP ASP TRP ALA THR SEQRES 18 A 404 ALA PHE CYS TYR TRP MET GLU ASN SER THR GLN GLY GLN SEQRES 19 A 404 ARG GLU SER HIS ALA ALA ASN ASN HIS GLY LEU TRP TYR SEQRES 20 A 404 GLU ALA ILE HIS LEU MET VAL LEU ALA TYR LEU ASP ARG SEQRES 21 A 404 THR ASP ARG ILE ARG GLU VAL ALA GLU GLN SER ILE LEU SEQRES 22 A 404 PRO LYS MET GLY ALA GLN ILE ALA ASP ASP GLY SER LEU SEQRES 23 A 404 PRO GLN GLU LEU LYS ARG THR LEU SER LEU HIS TYR SER SEQRES 24 A 404 THR PHE ALA LEU GLU ALA LEU MET GLU ALA ASN GLN ILE SEQRES 25 A 404 THR SER GLN ILE GLY ILE ASN LEU TRP SER THR PRO ALA SEQRES 26 A 404 SER ASN GLY LYS VAL ALA SER GLN ALA VAL ASP TYR LEU SEQRES 27 A 404 TYR PRO PHE TYR LEU ASN PRO GLU ASP TRP LYS PHE LYS SEQRES 28 A 404 GLN ILE LYS PRO PHE ASP GLN SER ARG ALA ALA ILE LEU SEQRES 29 A 404 LEU TYR GLU ALA GLY THR ALA LEU GLY ASN GLN LYS TYR SEQRES 30 A 404 VAL ASP THR ALA LYS ARG ILE GLY LEU LYS TYR SER THR SEQRES 31 A 404 SER ASP VAL GLU THR ILE PRO TYR LEU VAL LEU LYS LYS SEQRES 32 A 404 LYS SEQRES 1 B 404 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 404 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA PRO LEU SEQRES 3 B 404 GLY PRO PHE ASN ALA THR LEU LEU GLU GLN LEU LYS ASN SEQRES 4 B 404 ASP TYR GLN LYS GLY GLU LYS GLU VAL THR ARG TYR ILE SEQRES 5 B 404 GLU LEU GLN GLU LYS VAL ALA GLU LYS TYR ILE LYS MET SEQRES 6 B 404 THR PRO LEU SER VAL THR ALA LYS LYS LYS LEU PRO PRO SEQRES 7 B 404 SER LYS ASP PRO ARG ASP TYR MET THR LEU SER PRO TYR SEQRES 8 B 404 TRP TRP PRO ASP SER THR LYS ILE ASP GLY LEU PRO TYR SEQRES 9 B 404 ILE ARG LYS ASN GLY GLU ARG ASN PRO GLU VAL TYR GLU SEQRES 10 B 404 TYR PRO GLU ARG GLU ASN ALA ASN ARG PHE GLY ASP ALA SEQRES 11 B 404 ALA TYR CYS LEU GLY VAL LEU TYR TYR ILE THR GLY LYS SEQRES 12 B 404 GLU VAL TYR ALA LYS ALA CYS ALA ASN HIS LEU ARG THR SEQRES 13 B 404 TRP PHE THR ASP PRO LYS LEU GLY MET ASN PRO ASN MET SEQRES 14 B 404 THR TYR ALA GLN ALA VAL PRO GLY MET LYS LYS MET ARG SEQRES 15 B 404 GLY SER GLY PHE ILE ASP SER ARG ARG PHE SER ARG ALA SEQRES 16 B 404 LEU GLY VAL ALA LYS LEU ILE GLU GLY SER LYS SER TRP SEQRES 17 B 404 THR PRO SER ASP LYS LYS LYS LEU ASP ASP TRP ALA THR SEQRES 18 B 404 ALA PHE CYS TYR TRP MET GLU ASN SER THR GLN GLY GLN SEQRES 19 B 404 ARG GLU SER HIS ALA ALA ASN ASN HIS GLY LEU TRP TYR SEQRES 20 B 404 GLU ALA ILE HIS LEU MET VAL LEU ALA TYR LEU ASP ARG SEQRES 21 B 404 THR ASP ARG ILE ARG GLU VAL ALA GLU GLN SER ILE LEU SEQRES 22 B 404 PRO LYS MET GLY ALA GLN ILE ALA ASP ASP GLY SER LEU SEQRES 23 B 404 PRO GLN GLU LEU LYS ARG THR LEU SER LEU HIS TYR SER SEQRES 24 B 404 THR PHE ALA LEU GLU ALA LEU MET GLU ALA ASN GLN ILE SEQRES 25 B 404 THR SER GLN ILE GLY ILE ASN LEU TRP SER THR PRO ALA SEQRES 26 B 404 SER ASN GLY LYS VAL ALA SER GLN ALA VAL ASP TYR LEU SEQRES 27 B 404 TYR PRO PHE TYR LEU ASN PRO GLU ASP TRP LYS PHE LYS SEQRES 28 B 404 GLN ILE LYS PRO PHE ASP GLN SER ARG ALA ALA ILE LEU SEQRES 29 B 404 LEU TYR GLU ALA GLY THR ALA LEU GLY ASN GLN LYS TYR SEQRES 30 B 404 VAL ASP THR ALA LYS ARG ILE GLY LEU LYS TYR SER THR SEQRES 31 B 404 SER ASP VAL GLU THR ILE PRO TYR LEU VAL LEU LYS LYS SEQRES 32 B 404 LYS FORMUL 3 HOH *430(H2 O) HELIX 1 AA1 ASN A 30 LYS A 43 1 14 HELIX 2 AA2 GLU A 45 MET A 65 1 21 HELIX 3 AA3 SER A 69 LYS A 73 5 5 HELIX 4 AA4 ASN A 112 TYR A 118 5 7 HELIX 5 AA5 PRO A 119 GLY A 142 1 24 HELIX 6 AA6 LYS A 143 PHE A 158 1 16 HELIX 7 AA7 GLY A 183 ASP A 188 5 6 HELIX 8 AA8 SER A 189 GLU A 203 1 15 HELIX 9 AA9 THR A 209 SER A 230 1 22 HELIX 10 AB1 SER A 230 ALA A 239 1 10 HELIX 11 AB2 ASN A 241 LEU A 258 1 18 HELIX 12 AB3 ARG A 260 SER A 271 1 12 HELIX 13 AB4 SER A 271 ILE A 280 1 10 HELIX 14 AB5 LEU A 286 LYS A 291 1 6 HELIX 15 AB6 LEU A 294 ILE A 316 1 23 HELIX 16 AB7 ALA A 331 ASN A 344 1 14 HELIX 17 AB8 PRO A 345 TRP A 348 5 4 HELIX 18 AB9 ASP A 357 GLY A 373 1 17 HELIX 19 AC1 ASN A 374 GLY A 385 1 12 HELIX 20 AC2 ASP A 392 ILE A 396 5 5 HELIX 21 AC3 TYR A 398 LYS A 402 5 5 HELIX 22 AC4 ASN B 30 LYS B 43 1 14 HELIX 23 AC5 GLU B 45 MET B 65 1 21 HELIX 24 AC6 SER B 69 LYS B 73 5 5 HELIX 25 AC7 ASN B 112 TYR B 118 5 7 HELIX 26 AC8 PRO B 119 GLY B 142 1 24 HELIX 27 AC9 LYS B 143 THR B 159 1 17 HELIX 28 AD1 GLY B 183 ASP B 188 5 6 HELIX 29 AD2 SER B 189 ALA B 199 1 11 HELIX 30 AD3 LYS B 200 GLU B 203 5 4 HELIX 31 AD4 THR B 209 SER B 230 1 22 HELIX 32 AD5 SER B 230 HIS B 238 1 9 HELIX 33 AD6 ASN B 241 LEU B 258 1 18 HELIX 34 AD7 ARG B 260 SER B 271 1 12 HELIX 35 AD8 SER B 271 ILE B 280 1 10 HELIX 36 AD9 LEU B 286 LYS B 291 1 6 HELIX 37 AE1 LEU B 294 GLN B 315 1 22 HELIX 38 AE2 VAL B 330 ASN B 344 1 15 HELIX 39 AE3 PRO B 345 TRP B 348 5 4 HELIX 40 AE4 ASP B 357 GLY B 373 1 17 HELIX 41 AE5 ASN B 374 GLY B 385 1 12 HELIX 42 AE6 ASP B 392 ILE B 396 5 5 HELIX 43 AE7 TYR B 398 LYS B 402 5 5 SHEET 1 AA1 2 MET A 86 LEU A 88 0 SHEET 2 AA1 2 TYR A 171 ALA A 174 1 O ALA A 174 N THR A 87 SHEET 1 AA2 2 TRP A 92 TRP A 93 0 SHEET 2 AA2 2 ILE A 105 ARG A 106 -1 O ILE A 105 N TRP A 93 SHEET 1 AA3 2 MET B 86 LEU B 88 0 SHEET 2 AA3 2 TYR B 171 ALA B 174 1 O ALA B 174 N THR B 87 SHEET 1 AA4 2 TRP B 92 TRP B 93 0 SHEET 2 AA4 2 ILE B 105 ARG B 106 -1 O ILE B 105 N TRP B 93 CRYST1 54.738 104.486 151.490 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018269 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006601 0.00000 MASTER 378 0 0 43 8 0 0 6 6551 2 0 64 END