HEADER VIRUS LIKE PARTICLE 30-MAY-24 9FJC TITLE COMPACT CVB1-VLP (TWEEN80) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: 2; COMPND 9 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: 3; COMPND 14 SYNONYM: P1C,VIRION PROTEIN 3; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CAPSID PROTEIN VP4; COMPND 18 CHAIN: 4; COMPND 19 SYNONYM: P1A,VIRION PROTEIN 4; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B1; SOURCE 3 ORGANISM_TAXID: 12071; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B1; SOURCE 8 ORGANISM_TAXID: 12071; SOURCE 9 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B1; SOURCE 13 ORGANISM_TAXID: 12071; SOURCE 14 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B1; SOURCE 18 ORGANISM_TAXID: 12071; SOURCE 19 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS COXSACKIEVIRUS B1, VACCINE, TWEEN80, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR Z.PLAVEC,S.J.BUTCHER REVDAT 1 31-JUL-24 9FJC 0 JRNL AUTH S.SOPPELA,Z.PLAVEC,S.GROHN,M.JARTTI,S.OIKARINEN,M.LAAJALA, JRNL AUTH 2 V.MARJOMAKI,S.J.BUTCHER,M.M.HANKANIEMI JRNL TITL COMPARISON OF STRUCTURE AND IMMUNOGENICITY OF CVB1-VLP AND JRNL TITL 2 INACTIVATED CVB1 VACCINE CANDIDATES. JRNL REF RES SQ 2024 JRNL REFN ESSN 2693-5015 JRNL PMID 38978565 JRNL DOI 10.21203/RS.3.RS-4545395/V1 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.150 REMARK 3 NUMBER OF PARTICLES : 86988 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9FJC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292139038. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COXSACKIEVIRUS B1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : COXSACKIEVIRUS B1 VIRUS-LIKE REMARK 245 PARTICLE BASED ON CVB1-10796, ISOLATED FROM ARGENTINA. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 100.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6336.80 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 240-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 240-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT2 2 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT3 2 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT1 3 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 -1.52590 REMARK 350 BIOMT1 4 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT2 4 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT3 4 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT1 5 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT2 5 -0.309020 0.500000 0.809020 7.62940 REMARK 350 BIOMT3 5 0.500000 0.809020 -0.309020 -1.23450 REMARK 350 BIOMT1 6 0.500000 0.809020 -0.309020 -1.23450 REMARK 350 BIOMT2 6 0.809020 -0.309020 0.500000 1.99740 REMARK 350 BIOMT3 6 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT1 7 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT2 7 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT3 7 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT1 8 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT2 8 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT3 8 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT1 9 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT2 9 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT3 9 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT1 10 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT2 10 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT3 10 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 -1.52590 REMARK 350 BIOMT2 11 0.000000 0.000000 1.000000 1.52590 REMARK 350 BIOMT3 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT2 12 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT3 12 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT1 13 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT2 13 -0.309020 -0.500000 0.809020 212.00000 REMARK 350 BIOMT3 13 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT1 14 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT2 14 0.809020 -0.309020 0.500000 1.99740 REMARK 350 BIOMT3 14 -0.309020 0.500000 0.809020 -7.62940 REMARK 350 BIOMT1 15 -0.309020 0.500000 0.809020 -7.62940 REMARK 350 BIOMT2 15 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT3 15 0.809020 -0.309020 0.500000 4.71520 REMARK 350 BIOMT1 16 0.809020 -0.309020 0.500000 4.71520 REMARK 350 BIOMT2 16 -0.309020 0.500000 0.809020 7.62940 REMARK 350 BIOMT3 16 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT1 17 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT2 17 -0.309020 -0.500000 0.809020 212.00000 REMARK 350 BIOMT3 17 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT1 18 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 1.52590 REMARK 350 BIOMT3 18 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT1 19 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT2 19 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT3 19 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT1 20 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 20 1.000000 0.000000 0.000000 1.52590 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 -1.52590 REMARK 350 BIOMT1 21 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT2 21 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT3 21 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT1 22 -0.309020 -0.500000 0.809020 212.00000 REMARK 350 BIOMT2 22 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT3 22 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT1 23 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT2 23 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT3 23 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT1 24 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT2 24 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT3 24 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT1 25 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT2 25 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT3 25 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT1 26 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT2 26 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT3 26 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT1 27 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT2 27 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT3 27 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT1 28 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT2 28 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT1 29 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT2 29 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT3 29 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT1 30 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT2 30 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT3 30 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT1 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT1 32 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT2 32 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT3 32 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT1 33 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT2 33 1.000000 0.000000 0.000000 1.52590 REMARK 350 BIOMT3 33 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT1 34 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT2 34 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT3 34 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT1 35 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT2 35 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT3 35 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT1 36 0.500000 0.809020 -0.309020 -1.23450 REMARK 350 BIOMT2 36 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT3 36 -0.309020 0.500000 0.809020 -7.62940 REMARK 350 BIOMT1 37 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT2 37 0.500000 0.809020 -0.309020 2.91420 REMARK 350 BIOMT3 37 0.809020 -0.309020 0.500000 4.71520 REMARK 350 BIOMT1 38 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT2 38 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT3 38 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT1 39 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT2 39 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT3 39 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT1 40 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT2 40 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT3 40 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 -1.52590 REMARK 350 BIOMT2 41 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT3 41 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT1 42 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT2 42 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT3 42 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT1 43 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT2 43 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT3 43 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT1 44 -0.500000 -0.809020 0.309020 424.00000 REMARK 350 BIOMT2 44 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT3 44 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT1 45 -0.309020 0.500000 0.809020 -7.62940 REMARK 350 BIOMT2 45 0.500000 0.809020 -0.309020 2.91420 REMARK 350 BIOMT3 45 -0.809020 0.309020 -0.500000 424.00000 REMARK 350 BIOMT1 46 0.809020 -0.309020 0.500000 4.71520 REMARK 350 BIOMT2 46 0.309020 -0.500000 -0.809020 424.00000 REMARK 350 BIOMT3 46 0.500000 0.809020 -0.309020 -1.23450 REMARK 350 BIOMT1 47 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT2 47 0.309020 0.500000 -0.809020 212.00000 REMARK 350 BIOMT3 47 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT1 48 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT2 48 0.000000 0.000000 -1.000000 424.00000 REMARK 350 BIOMT3 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT2 49 -0.309020 0.500000 -0.809020 343.02000 REMARK 350 BIOMT3 49 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT1 50 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 50 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT3 50 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT1 51 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT2 51 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT3 51 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT1 52 -0.309020 -0.500000 0.809020 212.00000 REMARK 350 BIOMT2 52 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT3 52 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT1 53 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT2 53 0.809020 0.309020 -0.500000 80.97700 REMARK 350 BIOMT3 53 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT1 54 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT2 54 -0.309020 -0.500000 -0.809020 555.02000 REMARK 350 BIOMT3 54 0.500000 -0.809020 0.309020 212.00000 REMARK 350 BIOMT1 55 0.309020 0.500000 0.809020 -131.02000 REMARK 350 BIOMT2 55 -0.500000 0.809020 -0.309020 212.00000 REMARK 350 BIOMT3 55 -0.809020 -0.309020 0.500000 343.02000 REMARK 350 BIOMT1 56 0.500000 0.809020 0.309020 -131.02000 REMARK 350 BIOMT2 56 -0.809020 0.309020 0.500000 212.00000 REMARK 350 BIOMT3 56 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT1 57 0.500000 -0.809020 -0.309020 343.02000 REMARK 350 BIOMT2 57 0.809020 0.309020 0.500000 -131.02000 REMARK 350 BIOMT3 57 -0.309020 -0.500000 0.809020 212.00000 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 424.00000 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 424.00000 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.500000 -0.809020 -0.309020 555.02000 REMARK 350 BIOMT2 59 0.809020 -0.309020 -0.500000 212.00000 REMARK 350 BIOMT3 59 0.309020 -0.500000 0.809020 80.97700 REMARK 350 BIOMT1 60 -0.500000 0.809020 0.309020 80.97700 REMARK 350 BIOMT2 60 -0.809020 -0.309020 -0.500000 555.02000 REMARK 350 BIOMT3 60 -0.309020 -0.500000 0.809020 212.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP 1 159 1.16 -69.57 REMARK 500 VAL 1 246 80.24 53.45 REMARK 500 ASP 2 57 -122.65 56.47 REMARK 500 ASN 3 197 160.88 175.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG 1 248 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-50497 RELATED DB: EMDB REMARK 900 COMPACT CVB1-VLP (TWEEN80) DBREF 9FJC 1 56 278 UNP P08291 POLG_CXB1J 626 848 DBREF 9FJC 2 13 263 UNP P08291 POLG_CXB1J 82 332 DBREF 9FJC 3 1 238 UNP P08291 POLG_CXB1J 333 570 DBREF 9FJC 4 27 43 UNP P08291 POLG_CXB1J 27 43 SEQADV 9FJC THR 1 80 UNP P08291 ASN 650 VARIANT SEQADV 9FJC LYS 1 84 UNP P08291 GLU 654 VARIANT SEQADV 9FJC PHE 1 87 UNP P08291 TYR 657 VARIANT SEQADV 9FJC ARG 1 101 UNP P08291 LEU 671 VARIANT SEQADV 9FJC LYS 1 103 UNP P08291 ARG 673 VARIANT SEQADV 9FJC LEU 1 104 UNP P08291 LYS 674 VARIANT SEQADV 9FJC GLU 1 105 UNP P08291 LEU 675 VARIANT SEQADV 9FJC LEU 1 106 UNP P08291 GLU 676 VARIANT SEQADV 9FJC GLN 1 125 UNP P08291 GLU 695 VARIANT SEQADV 9FJC SER 1 130 UNP P08291 THR 700 VARIANT SEQADV 9FJC HIS 1 139 UNP P08291 GLN 709 VARIANT SEQADV 9FJC LYS 1 155 UNP P08291 THR 725 VARIANT SEQADV 9FJC SER 1 264 UNP P08291 ASN 834 VARIANT SEQADV 9FJC ILE 1 266 UNP P08291 THR 836 VARIANT SEQADV 9FJC SER 1 271 UNP P08291 THR 841 VARIANT SEQADV 9FJC THR 1 273 UNP P08291 SER 843 VARIANT SEQADV 9FJC ASP 1 274 UNP P08291 ASN 844 VARIANT SEQADV 9FJC ILE 1 276 UNP P08291 THR 846 VARIANT SEQADV 9FJC ALA 2 49 UNP P08291 GLY 118 VARIANT SEQADV 9FJC GLU 2 142 UNP P08291 LYS 211 VARIANT SEQADV 9FJC SER 2 144 UNP P08291 ALA 213 VARIANT SEQADV 9FJC SER 2 151 UNP P08291 ASN 220 VARIANT SEQADV 9FJC GLN 2 159 UNP P08291 GLU 228 VARIANT SEQADV 9FJC GLU 2 162 UNP P08291 THR 231 VARIANT SEQADV 9FJC ALA 2 165 UNP P08291 ASP 234 VARIANT SEQADV 9FJC LEU 2 202 UNP P08291 ILE 271 VARIANT SEQADV 9FJC PHE 2 216 UNP P08291 TYR 285 VARIANT SEQADV 9FJC ASN 2 262 UNP P08291 SER 331 VARIANT SEQADV 9FJC GLU 3 59 UNP P08291 ASP 391 VARIANT SEQADV 9FJC ASP 3 60 UNP P08291 ASN 392 VARIANT SEQADV 9FJC SER 3 63 UNP P08291 ASN 395 VARIANT SEQADV 9FJC SER 3 64 UNP P08291 GLY 396 VARIANT SEQADV 9FJC GLY 3 79 UNP P08291 ARG 411 VARIANT SEQADV 9FJC LYS 3 80 UNP P08291 ARG 412 VARIANT SEQADV 9FJC LYS 3 146 UNP P08291 ARG 478 VARIANT SEQADV 9FJC VAL 3 199 UNP P08291 ILE 531 VARIANT SEQADV 9FJC SER 3 207 UNP P08291 THR 539 VARIANT SEQADV 9FJC THR 3 235 UNP P08291 ASN 567 VARIANT SEQRES 1 1 223 TYR HIS SER ARG SER GLU SER SER ILE GLU ASN PHE LEU SEQRES 2 1 223 CYS ARG SER ALA CYS VAL TYR TYR ALA THR TYR THR ASN SEQRES 3 1 223 ASN SER LYS LYS GLY PHE ALA GLU TRP VAL ILE ASN THR SEQRES 4 1 223 ARG GLN VAL ALA GLN LEU ARG ARG LYS LEU GLU LEU PHE SEQRES 5 1 223 THR TYR LEU ARG PHE ASP LEU GLU LEU THR PHE VAL ILE SEQRES 6 1 223 THR SER ALA GLN GLN PRO SER THR ALA SER SER VAL ASP SEQRES 7 1 223 ALA PRO VAL GLN THR HIS GLN ILE MET TYR VAL PRO PRO SEQRES 8 1 223 GLY GLY PRO VAL PRO THR LYS VAL LYS ASP TYR ALA TRP SEQRES 9 1 223 GLN THR SER THR ASN PRO SER VAL PHE TRP THR GLU GLY SEQRES 10 1 223 ASN ALA PRO PRO ARG MET SER ILE PRO PHE ILE SER ILE SEQRES 11 1 223 GLY ASN ALA TYR SER CYS PHE TYR ASP GLY TRP THR GLN SEQRES 12 1 223 PHE SER ARG ASN GLY VAL TYR GLY ILE ASN THR LEU ASN SEQRES 13 1 223 ASN MET GLY THR LEU TYR MET ARG HIS VAL ASN GLU ALA SEQRES 14 1 223 GLY GLN GLY PRO ILE LYS SER THR VAL ARG ILE TYR PHE SEQRES 15 1 223 LYS PRO LYS HIS VAL LYS ALA TRP VAL PRO ARG PRO PRO SEQRES 16 1 223 ARG LEU CYS GLN TYR GLU LYS GLN LYS ASN VAL ASN PHE SEQRES 17 1 223 SER PRO ILE GLY VAL THR THR SER ARG THR ASP ILE ILE SEQRES 18 1 223 THR THR SEQRES 1 2 251 VAL ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR SEQRES 2 2 251 GLN GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY VAL TRP SEQRES 3 2 251 PRO GLU TYR LEU LYS ASP ASN GLU ALA THR ALA GLU ASP SEQRES 4 2 251 GLN PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR SEQRES 5 2 251 THR LEU GLU SER VAL GLN TRP MET LYS ASN SER ALA GLY SEQRES 6 2 251 TRP TRP TRP LYS LEU PRO ASP ALA LEU SER GLN MET GLY SEQRES 7 2 251 LEU PHE GLY GLN ASN MET GLN TYR HIS TYR LEU GLY ARG SEQRES 8 2 251 THR GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SER LYS SEQRES 9 2 251 PHE HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL PRO GLU SEQRES 10 2 251 ALA GLU MET GLY CYS SER ASN LEU ASN ASN THR PRO GLU SEQRES 11 2 251 PHE SER GLU LEU SER GLY GLY ASP SER ALA ARG MET PHE SEQRES 12 2 251 THR ASP THR GLN VAL GLY GLU SER ASN ALA LYS LYS VAL SEQRES 13 2 251 GLN THR ALA VAL TRP ASN ALA GLY MET GLY VAL GLY VAL SEQRES 14 2 251 GLY ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN LEU SEQRES 15 2 251 ARG THR ASN ASN SER ALA THR LEU VAL MET PRO TYR ILE SEQRES 16 2 251 ASN SER VAL PRO MET ASP ASN MET PHE ARG HIS ASN ASN SEQRES 17 2 251 LEU THR LEU MET ILE ILE PRO PHE VAL PRO LEU ASN TYR SEQRES 18 2 251 SER GLU GLY SER SER PRO TYR VAL PRO ILE THR VAL THR SEQRES 19 2 251 ILE ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG LEU SEQRES 20 2 251 ALA SER ASN GLN SEQRES 1 3 238 GLY LEU PRO VAL MET THR THR PRO GLY SER THR GLN PHE SEQRES 2 3 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 3 238 GLN PHE ASP VAL THR PRO GLU MET GLN ILE PRO GLY ARG SEQRES 4 3 238 VAL ASN ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 3 238 VAL PRO VAL ASN ASN THR GLU ASP ASN VAL SER SER LEU SEQRES 6 3 238 LYS ALA TYR GLN ILE PRO VAL GLN SER ASN SER ASP ASN SEQRES 7 3 238 GLY LYS GLN VAL PHE GLY PHE PRO LEU GLN PRO GLY ALA SEQRES 8 3 238 ASN ASN VAL LEU ASN ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 3 238 PHE MET PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 3 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY VAL PRO LYS SEQRES 12 3 238 ASN ARG LYS ASP ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS VAL PRO SEQRES 14 3 238 TRP ILE SER GLN THR HIS TYR ARG TYR VAL VAL GLU ASP SEQRES 15 3 238 GLU TYR THR ALA ALA GLY TYR VAL THR CYS TRP TYR GLN SEQRES 16 3 238 THR ASN ILE VAL VAL PRO ALA ASP VAL GLN SER SER CYS SEQRES 17 3 238 ASP ILE LEU CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG MET LEU LYS ASP THR PRO PHE ILE ARG GLN ASP SEQRES 19 3 238 THR PHE TYR GLN SEQRES 1 4 17 TYR THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SEQRES 2 4 17 SER ALA ASN ARG HET PLM 1 301 18 HETNAM PLM PALMITIC ACID FORMUL 5 PLM C16 H32 O2 HELIX 1 AA1 ARG 1 59 SER 1 62 5 4 HELIX 2 AA2 SER 1 63 CYS 1 69 1 7 HELIX 3 AA3 VAL 1 97 GLU 1 105 1 9 HELIX 4 AA4 ASP 1 156 THR 1 161 5 6 HELIX 5 AA5 GLY 1 206 ASN 1 211 5 6 HELIX 6 AA6 LYS 2 43 ALA 2 47 5 5 HELIX 7 AA7 PRO 2 56 THR 2 60 5 5 HELIX 8 AA8 LEU 2 82 LEU 2 86 1 5 HELIX 9 AA9 MET 2 89 TYR 2 98 1 10 HELIX 10 AB1 GLU 2 142 SER 2 147 1 6 HELIX 11 AB2 ALA 2 171 ALA 2 175 5 5 HELIX 12 AB3 GLY 2 180 PHE 2 187 5 8 HELIX 13 AB4 ASN 3 42 GLU 3 48 1 7 HELIX 14 AB5 SER 3 64 GLN 3 69 5 6 HELIX 15 AB6 ASN 3 92 ARG 3 97 1 6 HELIX 16 AB7 THR 3 98 ASN 3 105 1 8 HELIX 17 AB8 ASN 3 144 MET 3 149 1 6 HELIX 18 AB9 ASP 3 182 ALA 3 186 5 5 HELIX 19 AC1 ASP 4 35 ASN 4 39 5 5 SHEET 1 AA1 4 ALA 1 72 THR 1 80 0 SHEET 2 AA1 4 ILE 1 229 PRO 1 247 -1 O ILE 1 235 N TYR 1 75 SHEET 3 AA1 4 PHE 1 107 GLN 1 124 -1 N THR 1 121 O THR 1 232 SHEET 4 AA1 4 TYR 1 189 SER 1 190 -1 O TYR 1 189 N LEU 1 110 SHEET 1 AA2 4 ARG 1 177 ILE 1 180 0 SHEET 2 AA2 4 PHE 1 107 GLN 1 124 -1 N LEU 1 116 O MET 1 178 SHEET 3 AA2 4 ILE 1 229 PRO 1 247 -1 O THR 1 232 N THR 1 121 SHEET 4 AA2 4 ARG 3 39 VAL 3 40 -1 O VAL 3 40 N ALA 1 244 SHEET 1 AA3 4 PHE 1 87 VAL 1 91 0 SHEET 2 AA3 4 THR 1 215 HIS 1 220 -1 O LEU 1 216 N TRP 1 90 SHEET 3 AA3 4 THR 1 138 VAL 1 144 -1 N MET 1 142 O TYR 1 217 SHEET 4 AA3 4 SER 1 166 THR 1 170 -1 O TRP 1 169 N HIS 1 139 SHEET 1 AA4 2 ARG 2 14 LEU 2 18 0 SHEET 2 AA4 2 SER 2 21 THR 2 25 -1 O THR 2 25 N ARG 2 14 SHEET 1 AA5 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA5 5 SER 2 199 MET 2 204 1 O VAL 2 203 N VAL 2 32 SHEET 3 AA5 5 HIS 2 99 GLN 2 111 -1 N ILE 2 108 O LEU 2 202 SHEET 4 AA5 5 PRO 2 242 LEU 2 257 -1 O THR 2 244 N GLN 2 111 SHEET 5 AA5 5 TYR 2 64 THR 2 65 -1 N TYR 2 64 O ILE 2 247 SHEET 1 AA6 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA6 5 SER 2 199 MET 2 204 1 O VAL 2 203 N VAL 2 32 SHEET 3 AA6 5 HIS 2 99 GLN 2 111 -1 N ILE 2 108 O LEU 2 202 SHEET 4 AA6 5 PRO 2 242 LEU 2 257 -1 O THR 2 244 N GLN 2 111 SHEET 5 AA6 5 VAL 2 69 GLN 2 70 -1 N VAL 2 69 O ILE 2 243 SHEET 1 AA7 5 ARG 2 153 MET 2 154 0 SHEET 2 AA7 5 TRP 2 78 LYS 2 81 -1 N TRP 2 79 O ARG 2 153 SHEET 3 AA7 5 LEU 2 221 ASN 2 232 -1 O LEU 2 223 N TRP 2 80 SHEET 4 AA7 5 GLN 2 119 PRO 2 128 -1 N VAL 2 127 O THR 2 222 SHEET 5 AA7 5 HIS 2 189 ASN 2 193 -1 O GLN 2 190 N VAL 2 124 SHEET 1 AA8 3 SER 3 51 VAL 3 52 0 SHEET 2 AA8 3 CYS 3 208 ALA 3 216 -1 O VAL 3 214 N SER 3 51 SHEET 3 AA8 3 ILE 3 70 VAL 3 72 -1 N VAL 3 72 O CYS 3 208 SHEET 1 AA9 4 SER 3 51 VAL 3 52 0 SHEET 2 AA9 4 CYS 3 208 ALA 3 216 -1 O VAL 3 214 N SER 3 51 SHEET 3 AA9 4 ILE 3 114 PHE 3 120 -1 N THR 3 117 O PHE 3 213 SHEET 4 AA9 4 SER 3 163 VAL 3 168 -1 O LEU 3 166 N LEU 3 116 SHEET 1 AB1 4 GLN 3 81 PRO 3 86 0 SHEET 2 AB1 4 TYR 3 189 TYR 3 194 -1 O CYS 3 192 N VAL 3 82 SHEET 3 AB1 4 LYS 3 129 SER 3 135 -1 N LEU 3 131 O TRP 3 193 SHEET 4 AB1 4 THR 3 152 ASP 3 157 -1 O TRP 3 156 N PHE 3 130 SHEET 1 AB2 3 ARG 3 177 TYR 3 178 0 SHEET 2 AB2 3 HIS 3 109 SER 3 111 -1 N TRP 3 110 O ARG 3 177 SHEET 3 AB2 3 SER 3 221 ARG 3 223 -1 O SER 3 221 N SER 3 111 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000