HEADER HYDROLASE 02-JUN-24 9FK6 TITLE THE STRUCTURE OF XT6 FROM G.PROTEINIPHILUS T-6: THE E265G/N158D MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1,4-BETA-XYLANASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: XYLANASE,1,4-BETA-D-XYLAN XYLANOHYDROLASE; COMPND 5 EC: 3.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS PROTEINIPHILUS; SOURCE 3 ORGANISM_TAXID: 860353; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS XT6, GLYCOSYNTHASE, HYDROLASE, GEOBACILLUS PROTEINIPHILUS T-6 EXPDTA X-RAY DIFFRACTION AUTHOR N.HADAD,O.CHMELNIK,M.DESSAU,Y.SHOHAM,G.SHOHAM REVDAT 1 18-JUN-25 9FK6 0 JRNL AUTH N.HADAD,O.CHMELNIK,M.DESSAU,Y.SHOHAM,G.SHOHAM JRNL TITL THE STRUCTURE OF XT6 FROM G.PROTEINIPHILUS T-6: THE JRNL TITL 2 E265G/N158D MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 42579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5500 - 4.8100 0.99 2767 157 0.1764 0.1942 REMARK 3 2 4.8100 - 3.8200 1.00 2734 126 0.1523 0.1759 REMARK 3 3 3.8200 - 3.3300 1.00 2708 157 0.1693 0.1986 REMARK 3 4 3.3300 - 3.0300 1.00 2703 150 0.1775 0.2134 REMARK 3 5 3.0300 - 2.8100 1.00 2695 130 0.1813 0.2361 REMARK 3 6 2.8100 - 2.6500 1.00 2661 163 0.1772 0.1928 REMARK 3 7 2.6500 - 2.5100 1.00 2700 140 0.1848 0.2018 REMARK 3 8 2.5100 - 2.4000 1.00 2670 168 0.1789 0.2331 REMARK 3 9 2.4000 - 2.3100 1.00 2679 129 0.1826 0.2386 REMARK 3 10 2.3100 - 2.2300 1.00 2686 141 0.1795 0.1990 REMARK 3 11 2.2300 - 2.1600 1.00 2702 144 0.1814 0.2053 REMARK 3 12 2.1600 - 2.1000 1.00 2698 122 0.1813 0.2190 REMARK 3 13 2.1000 - 2.0500 1.00 2671 142 0.1893 0.2551 REMARK 3 14 2.0500 - 2.0000 1.00 2668 166 0.2099 0.2494 REMARK 3 15 2.0000 - 1.9500 1.00 2684 118 0.2127 0.2997 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.175 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.444 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3150 REMARK 3 ANGLE : 0.795 4270 REMARK 3 CHIRALITY : 0.053 442 REMARK 3 PLANARITY : 0.005 556 REMARK 3 DIHEDRAL : 5.987 410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9FK6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1292139074. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42623 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 39.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.26000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 5K, 0.1M MES BUFFER AT PH 6.5 REMARK 280 AND 0.02M ZINC CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 29.86012 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.93700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.49328 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 29.86012 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.93700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 53.49328 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 535 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 552 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 769 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 960 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 95 O HOH A 501 1.98 REMARK 500 O HOH A 504 O HOH A 655 2.00 REMARK 500 O HOH A 527 O HOH A 704 2.05 REMARK 500 O HOH A 828 O HOH A 958 2.12 REMARK 500 NZ LYS A 72 O HOH A 502 2.13 REMARK 500 OH TYR A 37 O HOH A 503 2.14 REMARK 500 OE2 GLU A 159 O HOH A 504 2.15 REMARK 500 NH2 ARG A 80 O HOH A 505 2.17 REMARK 500 O HOH A 935 O HOH A 1003 2.17 REMARK 500 OG1 THR A 96 OD1 ASP A 158 2.18 REMARK 500 O HOH A 551 O HOH A 924 2.18 REMARK 500 O HOH A 752 O HOH A 961 2.19 REMARK 500 OE1 GLU A 137 O HOH A 506 2.19 REMARK 500 OD2 ASP A 155 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 579 O HOH A 604 4454 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 6 138.27 78.77 REMARK 500 ASN A 59 -30.11 -143.53 REMARK 500 ILE A 318 -62.84 -107.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1018 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1019 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A1020 DISTANCE = 7.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 407 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 11 NE2 REMARK 620 2 GLU A 27 OE2 33.7 REMARK 620 3 ASP A 365 OD2 119.9 99.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 406 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD2 REMARK 620 2 HOH A 562 O 94.2 REMARK 620 3 HOH A 597 O 92.9 91.4 REMARK 620 4 HOH A 780 O 87.9 88.6 179.2 REMARK 620 5 HOH A 784 O 91.8 173.9 89.6 90.4 REMARK 620 6 HOH A 914 O 176.3 89.1 88.7 90.5 84.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 27 O REMARK 620 2 SER A 307 O 103.7 REMARK 620 3 ILE A 310 O 89.4 80.5 REMARK 620 4 HOH A 813 O 85.7 90.6 168.5 REMARK 620 5 HOH A 861 O 88.7 167.5 101.7 88.6 REMARK 620 6 HOH A 870 O 166.0 90.0 90.0 97.3 77.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 58 OE1 REMARK 620 2 HIS A 322 NE2 120.9 REMARK 620 3 HOH A 525 O 95.7 105.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 282 OD1 REMARK 620 2 HIS A 378 NE2 106.7 REMARK 620 3 HOH A 856 O 108.4 2.0 REMARK 620 4 HOH A 927 O 109.4 4.6 5.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 282 OD2 REMARK 620 2 HOH A 609 O 98.0 REMARK 620 3 HOH A 826 O 95.0 161.9 REMARK 620 4 HOH A 897 O 154.5 73.5 89.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 297 OD1 REMARK 620 2 ALA A 374 O 97.1 REMARK 620 3 ASP A 377 OD1 149.4 83.3 REMARK 620 4 LYS A 379 O 90.6 170.1 86.9 REMARK 620 5 HOH A 547 O 76.5 89.6 72.9 86.2 REMARK 620 N 1 2 3 4 DBREF 9FK6 A 1 379 UNP P40943 XYN1_GEOSE 29 407 SEQADV 9FK6 ASP A 158 UNP P40943 ASN 186 ENGINEERED MUTATION SEQADV 9FK6 GLY A 265 UNP P40943 GLU 293 ENGINEERED MUTATION SEQRES 1 A 379 LYS ASN ALA ASP SER TYR ALA LYS LYS PRO HIS ILE SER SEQRES 2 A 379 ALA LEU ASN ALA PRO GLN LEU ASP GLN ARG TYR LYS ASN SEQRES 3 A 379 GLU PHE THR ILE GLY ALA ALA VAL GLU PRO TYR GLN LEU SEQRES 4 A 379 GLN ASN GLU LYS ASP VAL GLN MET LEU LYS ARG HIS PHE SEQRES 5 A 379 ASN SER ILE VAL ALA GLU ASN VAL MET LYS PRO ILE SER SEQRES 6 A 379 ILE GLN PRO GLU GLU GLY LYS PHE ASN PHE GLU GLN ALA SEQRES 7 A 379 ASP ARG ILE VAL LYS PHE ALA LYS ALA ASN GLY MET ASP SEQRES 8 A 379 ILE ARG PHE HIS THR LEU VAL TRP HIS SER GLN VAL PRO SEQRES 9 A 379 GLN TRP PHE PHE LEU ASP LYS GLU GLY LYS PRO MET VAL SEQRES 10 A 379 ASN GLU THR ASP PRO VAL LYS ARG GLU GLN ASN LYS GLN SEQRES 11 A 379 LEU LEU LEU LYS ARG LEU GLU THR HIS ILE LYS THR ILE SEQRES 12 A 379 VAL GLU ARG TYR LYS ASP ASP ILE LYS TYR TRP ASP VAL SEQRES 13 A 379 VAL ASP GLU VAL VAL GLY ASP ASP GLY LYS LEU ARG ASN SEQRES 14 A 379 SER PRO TRP TYR GLN ILE ALA GLY ILE ASP TYR ILE LYS SEQRES 15 A 379 VAL ALA PHE GLN ALA ALA ARG LYS TYR GLY GLY ASP ASN SEQRES 16 A 379 ILE LYS LEU TYR MET ASN ASP TYR ASN THR GLU VAL GLU SEQRES 17 A 379 PRO LYS ARG THR ALA LEU TYR ASN LEU VAL LYS GLN LEU SEQRES 18 A 379 LYS GLU GLU GLY VAL PRO ILE ASP GLY ILE GLY HIS GLN SEQRES 19 A 379 SER HIS ILE GLN ILE GLY TRP PRO SER GLU ALA GLU ILE SEQRES 20 A 379 GLU LYS THR ILE ASN MET PHE ALA ALA LEU GLY LEU ASP SEQRES 21 A 379 ASN GLN ILE THR GLY LEU ASP VAL SER MET TYR GLY TRP SEQRES 22 A 379 PRO PRO ARG ALA TYR PRO THR TYR ASP ALA ILE PRO LYS SEQRES 23 A 379 GLN LYS PHE LEU ASP GLN ALA ALA ARG TYR ASP ARG LEU SEQRES 24 A 379 PHE LYS LEU TYR GLU LYS LEU SER ASP LYS ILE SER ASN SEQRES 25 A 379 VAL THR PHE TRP GLY ILE ALA ASP ASN HIS THR TRP LEU SEQRES 26 A 379 ASP SER ARG ALA ASP VAL TYR TYR ASP ALA ASN GLY ASN SEQRES 27 A 379 VAL VAL VAL ASP PRO ASN ALA PRO TYR ALA LYS VAL GLU SEQRES 28 A 379 LYS GLY LYS GLY LYS ASP ALA PRO PHE VAL PHE GLY PRO SEQRES 29 A 379 ASP TYR LYS VAL LYS PRO ALA TYR TRP ALA ILE ILE ASP SEQRES 30 A 379 HIS LYS HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET ZN A 405 1 HET ZN A 406 1 HET ZN A 407 1 HET CL A 408 1 HET CL A 409 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 ZN 7(ZN 2+) FORMUL 9 CL 2(CL 1-) FORMUL 11 HOH *520(H2 O) HELIX 1 AA1 SER A 13 ALA A 17 5 5 HELIX 2 AA2 GLN A 19 LYS A 25 1 7 HELIX 3 AA3 GLU A 35 GLN A 40 5 6 HELIX 4 AA4 ASN A 41 PHE A 52 1 12 HELIX 5 AA5 LYS A 62 GLN A 67 1 6 HELIX 6 AA6 PHE A 75 ASN A 88 1 14 HELIX 7 AA7 PRO A 104 LEU A 109 5 6 HELIX 8 AA8 PRO A 115 GLU A 119 5 5 HELIX 9 AA9 ASP A 121 LYS A 148 1 28 HELIX 10 AB1 SER A 170 GLY A 177 1 8 HELIX 11 AB2 ILE A 178 GLY A 193 1 16 HELIX 12 AB3 PRO A 209 GLU A 224 1 16 HELIX 13 AB4 SER A 243 ALA A 256 1 14 HELIX 14 AB5 THR A 280 ILE A 284 5 5 HELIX 15 AB6 PRO A 285 LEU A 306 1 22 HELIX 16 AB7 THR A 323 ALA A 329 5 7 HELIX 17 AB8 LYS A 369 ASP A 377 1 9 SHEET 1 AA110 HIS A 236 ILE A 237 0 SHEET 2 AA110 ASP A 260 VAL A 268 1 O ASP A 267 N ILE A 237 SHEET 3 AA110 ILE A 310 PHE A 315 1 O THR A 314 N ILE A 263 SHEET 4 AA110 THR A 29 VAL A 34 1 N GLY A 31 O VAL A 313 SHEET 5 AA110 SER A 54 ALA A 57 1 O VAL A 56 N VAL A 34 SHEET 6 AA110 ASP A 91 PHE A 94 1 O ARG A 93 N ILE A 55 SHEET 7 AA110 TYR A 153 ASP A 158 1 O ASP A 155 N PHE A 94 SHEET 8 AA110 LYS A 197 ASP A 202 1 O TYR A 199 N TRP A 154 SHEET 9 AA110 GLY A 230 HIS A 233 1 O GLY A 232 N MET A 200 SHEET 10 AA110 ASP A 260 VAL A 268 1 O GLN A 262 N HIS A 233 SHEET 1 AA2 3 VAL A 339 VAL A 340 0 SHEET 2 AA2 3 VAL A 331 TYR A 333 -1 N TYR A 332 O VAL A 340 SHEET 3 AA2 3 LYS A 349 GLU A 351 -1 O GLU A 351 N VAL A 331 LINK NE2 HIS A 11 ZN ZN A 407 1555 1555 2.08 LINK OD2 ASP A 21 ZN ZN A 406 1555 1555 2.08 LINK O GLU A 27 ZN ZN A 405 1555 1555 2.34 LINK OE2 GLU A 27 ZN ZN A 407 1555 4444 2.02 LINK OE1 GLU A 58 ZN ZN A 401 1555 1555 1.97 LINK OD1 ASP A 282 ZN ZN A 402 1555 4454 2.07 LINK OD2 ASP A 282 ZN ZN A 404 1555 1555 2.25 LINK OD1 ASP A 297 ZN ZN A 403 1555 1555 2.35 LINK O SER A 307 ZN ZN A 405 1555 1555 2.33 LINK O ILE A 310 ZN ZN A 405 1555 1555 2.38 LINK NE2 HIS A 322 ZN ZN A 401 1555 1555 1.98 LINK OD2 ASP A 365 ZN ZN A 407 1555 1555 1.94 LINK O ALA A 374 ZN ZN A 403 1555 1555 2.26 LINK OD1 ASP A 377 ZN ZN A 403 1555 1555 2.48 LINK NE2 HIS A 378 ZN ZN A 402 1555 1555 2.23 LINK O LYS A 379 ZN ZN A 403 1555 1555 2.48 LINK ZN ZN A 401 O HOH A 525 1555 1555 2.00 LINK ZN ZN A 402 O HOH A 856 1555 1555 2.42 LINK ZN ZN A 402 O HOH A 927 1555 4444 2.54 LINK ZN ZN A 403 O HOH A 547 1555 1555 2.44 LINK ZN ZN A 404 O HOH A 609 1555 4454 2.58 LINK ZN ZN A 404 O HOH A 826 1555 1555 2.47 LINK ZN ZN A 404 O HOH A 897 1555 4454 2.13 LINK ZN ZN A 405 O HOH A 813 1555 1555 2.58 LINK ZN ZN A 405 O HOH A 861 1555 1555 2.46 LINK ZN ZN A 405 O HOH A 870 1555 1555 2.50 LINK ZN ZN A 406 O HOH A 562 1555 1555 2.16 LINK ZN ZN A 406 O HOH A 597 1555 1555 2.09 LINK ZN ZN A 406 O HOH A 780 1555 1555 2.23 LINK ZN ZN A 406 O HOH A 784 1555 1555 2.10 LINK ZN ZN A 406 O HOH A 914 1555 1555 2.13 CISPEP 1 HIS A 95 THR A 96 0 0.79 CISPEP 2 GLU A 208 PRO A 209 0 3.85 CISPEP 3 TRP A 241 PRO A 242 0 -7.21 CISPEP 4 TRP A 273 PRO A 274 0 -6.77 CRYST1 89.133 61.874 110.956 90.00 105.37 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011219 0.000000 0.003084 0.00000 SCALE2 0.000000 0.016162 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009347 0.00000 CONECT 58 3075 CONECT 130 3074 CONECT 183 3073 CONECT 438 3069 CONECT 2275 3072 CONECT 2398 3071 CONECT 2488 3073 CONECT 2511 3073 CONECT 2611 3069 CONECT 2943 3075 CONECT 3022 3071 CONECT 3046 3071 CONECT 3057 3070 CONECT 3061 3071 CONECT 3069 438 2611 3102 CONECT 3070 3057 3433 CONECT 3071 2398 3022 3046 3061 CONECT 3071 3124 CONECT 3072 2275 3403 CONECT 3073 183 2488 2511 3390 CONECT 3073 3438 3447 CONECT 3074 130 3139 3174 3357 CONECT 3074 3361 3491 CONECT 3075 58 2943 CONECT 3102 3069 CONECT 3124 3071 CONECT 3139 3074 CONECT 3174 3074 CONECT 3357 3074 CONECT 3361 3074 CONECT 3390 3073 CONECT 3403 3072 CONECT 3433 3070 CONECT 3438 3073 CONECT 3447 3073 CONECT 3491 3074 MASTER 372 0 9 17 13 0 0 6 3596 1 36 30 END