data_9FN1 # _entry.id 9FN1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FN1 pdb_00009fn1 10.2210/pdb9fn1/pdb WWPDB D_1292139256 ? ? EMDB EMD-50583 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-16 ? 2 'EM metadata' 1 0 2025-04-16 ? 3 FSC 1 0 2025-04-16 ? 4 'Half map' 1 0 2025-04-16 1 5 'Half map' 1 0 2025-04-16 2 6 Image 1 0 2025-04-16 ? 7 'Primary map' 1 0 2025-04-16 ? 8 'Structure model' 1 1 2025-07-09 ? 9 'EM metadata' 1 1 2025-07-09 ? 10 'Structure model' 1 2 2025-10-29 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 8 'Structure model' 'Data collection' 2 9 'EM metadata' 'Data processing' 3 9 'EM metadata' 'Experimental summary' 4 10 'Structure model' 'Data collection' 5 10 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 8 'Structure model' em_admin 2 8 'Structure model' em_software 3 9 'EM metadata' em_admin 4 9 'EM metadata' em_software 5 10 'Structure model' citation 6 10 'Structure model' citation_author 7 10 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 8 'Structure model' '_em_admin.last_update' 2 8 'Structure model' '_em_software.name' 3 9 'EM metadata' '_em_admin.last_update' 4 9 'EM metadata' '_em_software.name' 5 10 'Structure model' '_citation.country' 6 10 'Structure model' '_citation.journal_abbrev' 7 10 'Structure model' '_citation.journal_id_ASTM' 8 10 'Structure model' '_citation.journal_id_CSD' 9 10 'Structure model' '_citation.journal_id_ISSN' 10 10 'Structure model' '_citation.journal_volume' 11 10 'Structure model' '_citation.page_first' 12 10 'Structure model' '_citation.page_last' 13 10 'Structure model' '_citation.pdbx_database_id_DOI' 14 10 'Structure model' '_citation.pdbx_database_id_PubMed' 15 10 'Structure model' '_citation.title' 16 10 'Structure model' '_citation.year' 17 10 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FN1 _pdbx_database_status.recvd_initial_deposition_date 2024-06-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details '360 A Loki CHMP4-7 rods' _pdbx_database_related.db_id EMD-50583 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email c.sachse@fz-juelich.de _pdbx_contact_author.name_first Carsten _pdbx_contact_author.name_last Sachse _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1168-5143 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Melnikov, N.' 1 ? 'Junglas, B.' 2 ? 'Halbi, G.' 3 ? 'Nachmias, D.' 4 ? 'Upcher, A.' 5 ? 'Zalk, R.' 6 ? 'Sachse, C.' 7 ? 'Bernheim-Groswasser, A.' 8 ? 'Elia, N.' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Embo J.' _citation.journal_id_ASTM EMJODG _citation.journal_id_CSD 0897 _citation.journal_id_ISSN 1460-2075 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 44 _citation.language ? _citation.page_first 665 _citation.page_last 681 _citation.title 'The Asgard archaeal ESCRT-III system forms helical filaments and remodels eukaryotic-like membranes.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s44318-024-00346-4 _citation.pdbx_database_id_PubMed 39753954 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Melnikov, N.' 1 0000-0002-8545-8963 primary 'Junglas, B.' 2 0000-0001-9348-3379 primary 'Halbi, G.' 3 ? primary 'Nachmias, D.' 4 0000-0003-4154-7136 primary 'Zerbib, E.' 5 0000-0003-2626-0532 primary 'Gueta, N.' 6 0009-0004-0847-2667 primary 'Upcher, A.' 7 0000-0002-0910-6552 primary 'Zalk, R.' 8 0000-0003-4251-6497 primary 'Sachse, C.' 9 0000-0002-1168-5143 primary 'Bernheim-Groswasser, A.' 10 0000-0003-3999-6098 primary 'Elia, N.' 11 0000-0002-2537-6173 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Vps20/32/60-like protein (ESCRT-III)' _entity.formula_weight 24739.963 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGLKKKLFPRKKGKEKANLITNAKVHIHKLNLVNRNYTKRAEISRKNAKIALRRGEKTRAKNFLIQYKSYNAKIDRSNNI RSKIERQIQAIEEGQLISQTGSIFEGIRDELKYIATEASPAKVAEIAEDSDVYVSEIEEAADILAGDPEIDLGIDVTDEL NQLETELLLSQGGTMPDAPSDDLQYIPEYGDELEEEVESKTKEKVQAEIEKLRKELES ; _entity_poly.pdbx_seq_one_letter_code_can ;MGLKKKLFPRKKGKEKANLITNAKVHIHKLNLVNRNYTKRAEISRKNAKIALRRGEKTRAKNFLIQYKSYNAKIDRSNNI RSKIERQIQAIEEGQLISQTGSIFEGIRDELKYIATEASPAKVAEIAEDSDVYVSEIEEAADILAGDPEIDLGIDVTDEL NQLETELLLSQGGTMPDAPSDDLQYIPEYGDELEEEVESKTKEKVQAEIEKLRKELES ; _entity_poly.pdbx_strand_id U _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LEU n 1 4 LYS n 1 5 LYS n 1 6 LYS n 1 7 LEU n 1 8 PHE n 1 9 PRO n 1 10 ARG n 1 11 LYS n 1 12 LYS n 1 13 GLY n 1 14 LYS n 1 15 GLU n 1 16 LYS n 1 17 ALA n 1 18 ASN n 1 19 LEU n 1 20 ILE n 1 21 THR n 1 22 ASN n 1 23 ALA n 1 24 LYS n 1 25 VAL n 1 26 HIS n 1 27 ILE n 1 28 HIS n 1 29 LYS n 1 30 LEU n 1 31 ASN n 1 32 LEU n 1 33 VAL n 1 34 ASN n 1 35 ARG n 1 36 ASN n 1 37 TYR n 1 38 THR n 1 39 LYS n 1 40 ARG n 1 41 ALA n 1 42 GLU n 1 43 ILE n 1 44 SER n 1 45 ARG n 1 46 LYS n 1 47 ASN n 1 48 ALA n 1 49 LYS n 1 50 ILE n 1 51 ALA n 1 52 LEU n 1 53 ARG n 1 54 ARG n 1 55 GLY n 1 56 GLU n 1 57 LYS n 1 58 THR n 1 59 ARG n 1 60 ALA n 1 61 LYS n 1 62 ASN n 1 63 PHE n 1 64 LEU n 1 65 ILE n 1 66 GLN n 1 67 TYR n 1 68 LYS n 1 69 SER n 1 70 TYR n 1 71 ASN n 1 72 ALA n 1 73 LYS n 1 74 ILE n 1 75 ASP n 1 76 ARG n 1 77 SER n 1 78 ASN n 1 79 ASN n 1 80 ILE n 1 81 ARG n 1 82 SER n 1 83 LYS n 1 84 ILE n 1 85 GLU n 1 86 ARG n 1 87 GLN n 1 88 ILE n 1 89 GLN n 1 90 ALA n 1 91 ILE n 1 92 GLU n 1 93 GLU n 1 94 GLY n 1 95 GLN n 1 96 LEU n 1 97 ILE n 1 98 SER n 1 99 GLN n 1 100 THR n 1 101 GLY n 1 102 SER n 1 103 ILE n 1 104 PHE n 1 105 GLU n 1 106 GLY n 1 107 ILE n 1 108 ARG n 1 109 ASP n 1 110 GLU n 1 111 LEU n 1 112 LYS n 1 113 TYR n 1 114 ILE n 1 115 ALA n 1 116 THR n 1 117 GLU n 1 118 ALA n 1 119 SER n 1 120 PRO n 1 121 ALA n 1 122 LYS n 1 123 VAL n 1 124 ALA n 1 125 GLU n 1 126 ILE n 1 127 ALA n 1 128 GLU n 1 129 ASP n 1 130 SER n 1 131 ASP n 1 132 VAL n 1 133 TYR n 1 134 VAL n 1 135 SER n 1 136 GLU n 1 137 ILE n 1 138 GLU n 1 139 GLU n 1 140 ALA n 1 141 ALA n 1 142 ASP n 1 143 ILE n 1 144 LEU n 1 145 ALA n 1 146 GLY n 1 147 ASP n 1 148 PRO n 1 149 GLU n 1 150 ILE n 1 151 ASP n 1 152 LEU n 1 153 GLY n 1 154 ILE n 1 155 ASP n 1 156 VAL n 1 157 THR n 1 158 ASP n 1 159 GLU n 1 160 LEU n 1 161 ASN n 1 162 GLN n 1 163 LEU n 1 164 GLU n 1 165 THR n 1 166 GLU n 1 167 LEU n 1 168 LEU n 1 169 LEU n 1 170 SER n 1 171 GLN n 1 172 GLY n 1 173 GLY n 1 174 THR n 1 175 MET n 1 176 PRO n 1 177 ASP n 1 178 ALA n 1 179 PRO n 1 180 SER n 1 181 ASP n 1 182 ASP n 1 183 LEU n 1 184 GLN n 1 185 TYR n 1 186 ILE n 1 187 PRO n 1 188 GLU n 1 189 TYR n 1 190 GLY n 1 191 ASP n 1 192 GLU n 1 193 LEU n 1 194 GLU n 1 195 GLU n 1 196 GLU n 1 197 VAL n 1 198 GLU n 1 199 SER n 1 200 LYS n 1 201 THR n 1 202 LYS n 1 203 GLU n 1 204 LYS n 1 205 VAL n 1 206 GLN n 1 207 ALA n 1 208 GLU n 1 209 ILE n 1 210 GLU n 1 211 LYS n 1 212 LEU n 1 213 ARG n 1 214 LYS n 1 215 GLU n 1 216 LEU n 1 217 GLU n 1 218 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 218 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Lokiarch_16760 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Loki GC14_75' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Candidatus Lokiarchaeia archaeon' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3067280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? U . n A 1 2 GLY 2 2 ? ? ? U . n A 1 3 LEU 3 3 ? ? ? U . n A 1 4 LYS 4 4 ? ? ? U . n A 1 5 LYS 5 5 ? ? ? U . n A 1 6 LYS 6 6 ? ? ? U . n A 1 7 LEU 7 7 ? ? ? U . n A 1 8 PHE 8 8 ? ? ? U . n A 1 9 PRO 9 9 ? ? ? U . n A 1 10 ARG 10 10 ? ? ? U . n A 1 11 LYS 11 11 ? ? ? U . n A 1 12 LYS 12 12 ? ? ? U . n A 1 13 GLY 13 13 ? ? ? U . n A 1 14 LYS 14 14 ? ? ? U . n A 1 15 GLU 15 15 15 GLU GLU U . n A 1 16 LYS 16 16 16 LYS LYS U . n A 1 17 ALA 17 17 17 ALA ALA U . n A 1 18 ASN 18 18 18 ASN ASN U . n A 1 19 LEU 19 19 19 LEU LEU U . n A 1 20 ILE 20 20 20 ILE ILE U . n A 1 21 THR 21 21 21 THR THR U . n A 1 22 ASN 22 22 22 ASN ASN U . n A 1 23 ALA 23 23 23 ALA ALA U . n A 1 24 LYS 24 24 24 LYS LYS U . n A 1 25 VAL 25 25 25 VAL VAL U . n A 1 26 HIS 26 26 26 HIS HIS U . n A 1 27 ILE 27 27 27 ILE ILE U . n A 1 28 HIS 28 28 28 HIS HIS U . n A 1 29 LYS 29 29 29 LYS LYS U . n A 1 30 LEU 30 30 30 LEU LEU U . n A 1 31 ASN 31 31 31 ASN ASN U . n A 1 32 LEU 32 32 32 LEU LEU U . n A 1 33 VAL 33 33 33 VAL VAL U . n A 1 34 ASN 34 34 34 ASN ASN U . n A 1 35 ARG 35 35 35 ARG ARG U . n A 1 36 ASN 36 36 36 ASN ASN U . n A 1 37 TYR 37 37 37 TYR TYR U . n A 1 38 THR 38 38 38 THR THR U . n A 1 39 LYS 39 39 39 LYS LYS U . n A 1 40 ARG 40 40 40 ARG ARG U . n A 1 41 ALA 41 41 41 ALA ALA U . n A 1 42 GLU 42 42 42 GLU GLU U . n A 1 43 ILE 43 43 43 ILE ILE U . n A 1 44 SER 44 44 44 SER SER U . n A 1 45 ARG 45 45 45 ARG ARG U . n A 1 46 LYS 46 46 46 LYS LYS U . n A 1 47 ASN 47 47 47 ASN ASN U . n A 1 48 ALA 48 48 48 ALA ALA U . n A 1 49 LYS 49 49 49 LYS LYS U . n A 1 50 ILE 50 50 50 ILE ILE U . n A 1 51 ALA 51 51 51 ALA ALA U . n A 1 52 LEU 52 52 52 LEU LEU U . n A 1 53 ARG 53 53 53 ARG ARG U . n A 1 54 ARG 54 54 54 ARG ARG U . n A 1 55 GLY 55 55 55 GLY GLY U . n A 1 56 GLU 56 56 56 GLU GLU U . n A 1 57 LYS 57 57 57 LYS LYS U . n A 1 58 THR 58 58 58 THR THR U . n A 1 59 ARG 59 59 59 ARG ARG U . n A 1 60 ALA 60 60 60 ALA ALA U . n A 1 61 LYS 61 61 61 LYS LYS U . n A 1 62 ASN 62 62 62 ASN ASN U . n A 1 63 PHE 63 63 63 PHE PHE U . n A 1 64 LEU 64 64 64 LEU LEU U . n A 1 65 ILE 65 65 65 ILE ILE U . n A 1 66 GLN 66 66 66 GLN GLN U . n A 1 67 TYR 67 67 67 TYR TYR U . n A 1 68 LYS 68 68 68 LYS LYS U . n A 1 69 SER 69 69 69 SER SER U . n A 1 70 TYR 70 70 70 TYR TYR U . n A 1 71 ASN 71 71 71 ASN ASN U . n A 1 72 ALA 72 72 72 ALA ALA U . n A 1 73 LYS 73 73 73 LYS LYS U . n A 1 74 ILE 74 74 74 ILE ILE U . n A 1 75 ASP 75 75 75 ASP ASP U . n A 1 76 ARG 76 76 76 ARG ARG U . n A 1 77 SER 77 77 77 SER SER U . n A 1 78 ASN 78 78 78 ASN ASN U . n A 1 79 ASN 79 79 79 ASN ASN U . n A 1 80 ILE 80 80 80 ILE ILE U . n A 1 81 ARG 81 81 81 ARG ARG U . n A 1 82 SER 82 82 82 SER SER U . n A 1 83 LYS 83 83 83 LYS LYS U . n A 1 84 ILE 84 84 84 ILE ILE U . n A 1 85 GLU 85 85 85 GLU GLU U . n A 1 86 ARG 86 86 86 ARG ARG U . n A 1 87 GLN 87 87 87 GLN GLN U . n A 1 88 ILE 88 88 88 ILE ILE U . n A 1 89 GLN 89 89 89 GLN GLN U . n A 1 90 ALA 90 90 90 ALA ALA U . n A 1 91 ILE 91 91 91 ILE ILE U . n A 1 92 GLU 92 92 92 GLU GLU U . n A 1 93 GLU 93 93 93 GLU GLU U . n A 1 94 GLY 94 94 94 GLY GLY U . n A 1 95 GLN 95 95 95 GLN GLN U . n A 1 96 LEU 96 96 96 LEU LEU U . n A 1 97 ILE 97 97 97 ILE ILE U . n A 1 98 SER 98 98 98 SER SER U . n A 1 99 GLN 99 99 99 GLN GLN U . n A 1 100 THR 100 100 100 THR THR U . n A 1 101 GLY 101 101 101 GLY GLY U . n A 1 102 SER 102 102 102 SER SER U . n A 1 103 ILE 103 103 103 ILE ILE U . n A 1 104 PHE 104 104 104 PHE PHE U . n A 1 105 GLU 105 105 105 GLU GLU U . n A 1 106 GLY 106 106 106 GLY GLY U . n A 1 107 ILE 107 107 107 ILE ILE U . n A 1 108 ARG 108 108 108 ARG ARG U . n A 1 109 ASP 109 109 109 ASP ASP U . n A 1 110 GLU 110 110 110 GLU GLU U . n A 1 111 LEU 111 111 111 LEU LEU U . n A 1 112 LYS 112 112 112 LYS LYS U . n A 1 113 TYR 113 113 113 TYR TYR U . n A 1 114 ILE 114 114 114 ILE ILE U . n A 1 115 ALA 115 115 115 ALA ALA U . n A 1 116 THR 116 116 116 THR THR U . n A 1 117 GLU 117 117 117 GLU GLU U . n A 1 118 ALA 118 118 118 ALA ALA U . n A 1 119 SER 119 119 119 SER SER U . n A 1 120 PRO 120 120 120 PRO PRO U . n A 1 121 ALA 121 121 121 ALA ALA U . n A 1 122 LYS 122 122 122 LYS LYS U . n A 1 123 VAL 123 123 123 VAL VAL U . n A 1 124 ALA 124 124 124 ALA ALA U . n A 1 125 GLU 125 125 125 GLU GLU U . n A 1 126 ILE 126 126 126 ILE ILE U . n A 1 127 ALA 127 127 127 ALA ALA U . n A 1 128 GLU 128 128 128 GLU GLU U . n A 1 129 ASP 129 129 129 ASP ASP U . n A 1 130 SER 130 130 130 SER SER U . n A 1 131 ASP 131 131 131 ASP ASP U . n A 1 132 VAL 132 132 132 VAL VAL U . n A 1 133 TYR 133 133 133 TYR TYR U . n A 1 134 VAL 134 134 134 VAL VAL U . n A 1 135 SER 135 135 135 SER SER U . n A 1 136 GLU 136 136 136 GLU GLU U . n A 1 137 ILE 137 137 137 ILE ILE U . n A 1 138 GLU 138 138 138 GLU GLU U . n A 1 139 GLU 139 139 139 GLU GLU U . n A 1 140 ALA 140 140 140 ALA ALA U . n A 1 141 ALA 141 141 141 ALA ALA U . n A 1 142 ASP 142 142 142 ASP ASP U . n A 1 143 ILE 143 143 143 ILE ILE U . n A 1 144 LEU 144 144 144 LEU LEU U . n A 1 145 ALA 145 145 145 ALA ALA U . n A 1 146 GLY 146 146 146 GLY GLY U . n A 1 147 ASP 147 147 147 ASP ASP U . n A 1 148 PRO 148 148 148 PRO PRO U . n A 1 149 GLU 149 149 149 GLU GLU U . n A 1 150 ILE 150 150 150 ILE ILE U . n A 1 151 ASP 151 151 151 ASP ASP U . n A 1 152 LEU 152 152 152 LEU LEU U . n A 1 153 GLY 153 153 153 GLY GLY U . n A 1 154 ILE 154 154 154 ILE ILE U . n A 1 155 ASP 155 155 155 ASP ASP U . n A 1 156 VAL 156 156 156 VAL VAL U . n A 1 157 THR 157 157 157 THR THR U . n A 1 158 ASP 158 158 158 ASP ASP U . n A 1 159 GLU 159 159 159 GLU GLU U . n A 1 160 LEU 160 160 160 LEU LEU U . n A 1 161 ASN 161 161 161 ASN ASN U . n A 1 162 GLN 162 162 162 GLN GLN U . n A 1 163 LEU 163 163 163 LEU LEU U . n A 1 164 GLU 164 164 164 GLU GLU U . n A 1 165 THR 165 165 165 THR THR U . n A 1 166 GLU 166 166 166 GLU GLU U . n A 1 167 LEU 167 167 167 LEU LEU U . n A 1 168 LEU 168 168 168 LEU LEU U . n A 1 169 LEU 169 169 169 LEU LEU U . n A 1 170 SER 170 170 170 SER SER U . n A 1 171 GLN 171 171 171 GLN GLN U . n A 1 172 GLY 172 172 172 GLY GLY U . n A 1 173 GLY 173 173 ? ? ? U . n A 1 174 THR 174 174 ? ? ? U . n A 1 175 MET 175 175 ? ? ? U . n A 1 176 PRO 176 176 ? ? ? U . n A 1 177 ASP 177 177 ? ? ? U . n A 1 178 ALA 178 178 ? ? ? U . n A 1 179 PRO 179 179 ? ? ? U . n A 1 180 SER 180 180 ? ? ? U . n A 1 181 ASP 181 181 ? ? ? U . n A 1 182 ASP 182 182 ? ? ? U . n A 1 183 LEU 183 183 ? ? ? U . n A 1 184 GLN 184 184 ? ? ? U . n A 1 185 TYR 185 185 ? ? ? U . n A 1 186 ILE 186 186 ? ? ? U . n A 1 187 PRO 187 187 ? ? ? U . n A 1 188 GLU 188 188 ? ? ? U . n A 1 189 TYR 189 189 ? ? ? U . n A 1 190 GLY 190 190 ? ? ? U . n A 1 191 ASP 191 191 ? ? ? U . n A 1 192 GLU 192 192 ? ? ? U . n A 1 193 LEU 193 193 ? ? ? U . n A 1 194 GLU 194 194 ? ? ? U . n A 1 195 GLU 195 195 ? ? ? U . n A 1 196 GLU 196 196 ? ? ? U . n A 1 197 VAL 197 197 ? ? ? U . n A 1 198 GLU 198 198 ? ? ? U . n A 1 199 SER 199 199 ? ? ? U . n A 1 200 LYS 200 200 ? ? ? U . n A 1 201 THR 201 201 ? ? ? U . n A 1 202 LYS 202 202 ? ? ? U . n A 1 203 GLU 203 203 ? ? ? U . n A 1 204 LYS 204 204 ? ? ? U . n A 1 205 VAL 205 205 ? ? ? U . n A 1 206 GLN 206 206 ? ? ? U . n A 1 207 ALA 207 207 ? ? ? U . n A 1 208 GLU 208 208 ? ? ? U . n A 1 209 ILE 209 209 ? ? ? U . n A 1 210 GLU 210 210 ? ? ? U . n A 1 211 LYS 211 211 ? ? ? U . n A 1 212 LEU 212 212 ? ? ? U . n A 1 213 ARG 213 213 ? ? ? U . n A 1 214 LYS 214 214 ? ? ? U . n A 1 215 GLU 215 215 ? ? ? U . n A 1 216 LEU 216 216 ? ? ? U . n A 1 217 GLU 217 217 ? ? ? U . n A 1 218 SER 218 218 ? ? ? U . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9FN1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FN1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FN1 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9FN1 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.007 ? 75660 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.908 ? 101760 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 15.178 ? 29520 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.054 ? 11820 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.029 ? 13380 ? f_plane_restr ? ? # _struct.entry_id 9FN1 _struct.title '360 A Loki CHMP4-7 rods' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FN1 _struct_keywords.text 'ESCRT-III, membrane remodling, tubulation, archaea, Loki, LIPID BINDING PROTEIN' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A0F8W953_LOKSG _struct_ref.pdbx_db_accession A0A0F8W953 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGLKKKLFPRKKGKEKANLITNAKVHIHKLNLVNRNYTKRAEISRKNAKIALRRGEKTRAKNFLIQYKSYNAKIDRSNNI RSKIERQIQAIEEGQLISQTGSIFEGIRDELKYIATEASPAKVAEIAEDSDVYVSEIEEAADILAGDPEIDLGIDVTDEL NQLETELLLSQGGTMPDAPSDDLQYIPEYGDELEEEVESKTKEKVQAEIEKLRKELES ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9FN1 _struct_ref_seq.pdbx_strand_id U _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 218 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A0F8W953 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 218 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 60-meric _pdbx_struct_assembly.oligomeric_count 60 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression ;1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60 ; _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? -0.574383 -0.818587 0.000243 976.35462 0.818586 -0.574382 0.001528 307.66827 -0.001111 0.001077 0.999999 9.26570 3 'point symmetry operation' ? ? 0.658641 0.752458 -0.000357 -167.57765 -0.752458 0.658640 -0.000920 446.69135 -0.000457 0.000875 1.000000 8.09808 4 'point symmetry operation' ? ? -0.735269 -0.677775 0.000612 984.19186 0.677776 -0.735269 0.000330 431.28834 0.000226 0.000657 1.000000 6.95012 5 'point symmetry operation' ? ? 0.803043 0.595921 -0.000806 -162.40125 -0.595921 0.803043 0.000286 323.40268 0.000818 0.000251 1.000000 5.93321 6 'point symmetry operation' ? ? -0.861912 -0.507058 -0.000211 966.52890 0.507058 -0.861912 -0.000017 552.75454 -0.000174 -0.000122 1.000000 5.37464 7 'point symmetry operation' ? ? 0.910931 0.412555 -0.001656 -131.20102 -0.412551 0.910931 0.002311 203.75718 0.002462 -0.001422 0.999996 4.17930 8 'point symmetry operation' ? ? -0.949689 -0.313193 0.000330 923.02644 0.313193 -0.949689 0.000318 667.51875 0.000214 0.000405 1.000000 2.89238 9 'point symmetry operation' ? ? 0.977408 0.211360 0.000984 -77.42641 -0.211360 0.977408 -0.000510 95.65466 -0.001070 0.000290 0.999999 2.29672 10 'point symmetry operation' ? ? -0.994386 -0.105809 -0.000446 856.99667 0.105809 -0.994386 0.000343 770.35811 -0.000480 0.000293 1.000000 1.04728 11 'point symmetry operation' ? ? -0.994326 0.106352 -0.002160 771.18451 -0.106355 -0.994327 0.001446 856.46860 -0.001994 0.001668 0.999997 -1.28682 12 'point symmetry operation' ? ? 0.977369 -0.211541 -0.000302 95.67359 0.211541 0.977368 -0.001275 -76.54776 0.000565 0.001182 0.999999 -2.89020 13 'point symmetry operation' ? ? -0.949583 0.313488 -0.004105 669.26568 -0.313494 -0.949590 0.000760 923.07793 -0.003659 0.002009 0.999991 -3.05967 14 'point symmetry operation' ? ? 0.910896 -0.412636 -0.000448 204.85753 0.412636 0.910896 -0.000750 -131.76141 0.000717 0.000498 1.000000 -4.68376 15 'point symmetry operation' ? ? -0.861596 0.507587 -0.002884 553.63774 -0.507590 -0.861599 0.000456 966.44864 -0.002253 0.001857 0.999996 -5.51995 16 'point symmetry operation' ? ? 0.802836 -0.596187 0.003852 322.07527 0.596191 0.802843 0.000135 -162.88501 -0.003173 0.002188 0.999993 -6.45239 17 'point symmetry operation' ? ? -0.734628 0.678467 -0.002077 431.76861 -0.678468 -0.734630 -0.000118 984.54509 -0.001606 0.001323 0.999998 -7.54186 18 'point symmetry operation' ? ? 0.658131 -0.752904 0.000234 446.57859 0.752904 0.658130 -0.000360 -167.45214 0.000117 0.000413 1.000000 -8.66788 19 'point symmetry operation' ? ? -0.574243 0.818682 0.001956 307.45376 -0.818680 -0.574247 0.001849 975.43656 0.002637 -0.000539 0.999996 -10.00482 20 'point symmetry operation' ? ? 0.483562 -0.875310 0.000245 567.70857 0.875310 0.483562 -0.000340 -146.08034 0.000179 0.000379 1.000000 -10.78283 21 'point symmetry operation' ? ? -0.388657 0.921382 -0.000573 190.89987 -0.921382 -0.388657 -0.000205 942.51091 -0.000412 0.000449 1.000000 -11.68172 22 'point symmetry operation' ? ? 0.287406 -0.957809 -0.000635 681.71973 0.957808 0.287407 -0.001211 -99.31292 0.001343 -0.000261 0.999999 -12.92401 23 'point symmetry operation' ? ? -0.184588 0.982815 0.001485 81.73395 -0.982813 -0.184591 0.002288 883.23957 0.002523 -0.001037 0.999996 -13.92864 24 'point symmetry operation' ? ? 0.079164 -0.996861 -0.001238 782.87276 0.996860 0.079166 -0.001761 -30.17867 0.001854 -0.001095 0.999998 -14.75826 25 'point symmetry operation' ? ? 0.027271 0.999628 -0.000572 -10.66302 -0.999628 0.027271 0.000106 804.55379 0.000121 0.000569 1.000000 -16.13448 26 'point symmetry operation' ? ? -0.132723 -0.991153 0.000201 866.44792 0.991153 -0.132723 0.000115 57.75717 -0.000087 0.000215 1.000000 -16.94389 27 'point symmetry operation' ? ? 0.238004 0.971264 -0.000165 -85.19656 -0.971264 0.238004 -0.000176 707.12552 -0.000132 0.000202 1.000000 -17.98651 28 'point symmetry operation' ? ? -0.339111 -0.940746 0.000394 930.00881 0.940746 -0.339111 0.001337 161.97945 -0.001124 0.000824 0.999999 -19.04130 29 'point symmetry operation' ? ? 0.338619 0.940923 -0.001071 -113.80710 -0.940923 0.338617 -0.001769 654.65929 -0.001302 0.001607 0.999998 42.74392 30 'point symmetry operation' ? ? -0.435962 -0.899965 0.000309 953.26254 0.899965 -0.435962 0.000503 218.26988 -0.000318 0.000497 1.000000 41.95938 31 'point symmetry operation' ? ? 0.529515 0.848300 -0.000523 -154.18833 -0.848300 0.529514 -0.001324 538.75593 -0.000846 0.001144 0.999999 40.73624 32 'point symmetry operation' ? ? -0.617655 -0.786449 0.000671 980.69569 0.786449 -0.617654 0.001259 338.53057 -0.000576 0.001305 0.999999 39.51905 33 'point symmetry operation' ? ? 0.697797 0.716296 -0.000537 -168.82828 -0.716295 0.697795 -0.001898 416.38908 -0.000985 0.001709 0.999998 38.38921 34 'point symmetry operation' ? ? -0.770044 -0.637990 -0.000856 982.89524 0.637986 -0.770043 0.002820 460.66385 -0.002459 0.001625 0.999996 37.82907 35 'point symmetry operation' ? ? 0.833060 0.553178 -0.002093 -156.92765 -0.553174 0.833063 0.002295 292.87219 0.003014 -0.000754 0.999995 36.31776 36 'point symmetry operation' ? ? -0.887685 -0.460451 0.000925 957.68771 0.460452 -0.887685 0.000361 582.13634 0.000655 0.000746 1.000000 35.21933 37 'point symmetry operation' ? ? 0.931371 0.364070 -0.000984 -120.24505 -0.364069 0.931371 0.000935 176.16037 0.001257 -0.000512 0.999999 34.63095 38 'point symmetry operation' ? ? -0.965046 -0.262079 -0.000465 908.82051 0.262078 -0.965046 0.000736 694.45483 -0.000641 0.000588 1.000000 33.59933 39 'point symmetry operation' ? ? 0.987374 0.158406 -0.000920 -59.13665 -0.158406 0.987374 0.000039 69.77639 0.000914 0.000108 1.000000 32.30502 40 'point symmetry operation' ? ? -0.998582 -0.053237 0.000179 837.18793 0.053237 -0.998582 0.000630 793.49938 0.000145 0.000639 1.000000 31.22410 41 'point symmetry operation' ? ? 0.998564 -0.053563 0.000768 22.05287 0.053564 0.998564 -0.001292 -20.75848 -0.000697 0.001332 0.999999 30.07275 42 'point symmetry operation' ? ? -0.987425 0.158073 -0.002290 747.49949 -0.158076 -0.987426 0.001168 875.04119 -0.002077 0.001516 0.999997 29.35106 43 'point symmetry operation' ? ? 0.964968 -0.262366 0.000794 120.86182 0.262366 0.964968 -0.000865 -92.53687 -0.000540 0.001043 0.999999 28.06417 44 'point symmetry operation' ? ? -0.931533 0.363652 -0.001990 640.63166 -0.363655 -0.931533 0.000953 936.18173 -0.001507 0.001612 0.999998 27.02322 45 'point symmetry operation' ? ? 0.887233 -0.461311 0.003102 232.89040 0.461315 0.887236 -0.000997 -141.81816 -0.002292 0.002315 0.999995 25.83935 46 'point symmetry operation' ? ? -0.833534 0.552465 -0.001875 523.51908 -0.552467 -0.833535 0.000604 973.37793 -0.001230 0.001540 0.999998 24.87516 47 'point symmetry operation' ? ? 0.770462 -0.637486 -0.000562 353.92048 0.637485 0.770462 -0.000784 -166.36045 0.000933 0.000246 1.000000 23.82257 48 'point symmetry operation' ? ? -0.697935 0.716161 0.000747 400.29575 -0.716160 -0.697936 0.000971 984.70247 0.001217 0.000143 0.999999 22.73043 49 'point symmetry operation' ? ? 0.618457 -0.785814 -0.002681 477.36807 0.785814 0.618462 -0.001408 -164.62020 0.002764 -0.001236 0.999995 21.89912 50 'point symmetry operation' ? ? -0.530849 0.847466 0.000534 278.57977 -0.847465 -0.530849 0.001304 969.98165 0.001389 0.000240 0.999999 20.51949 51 'point symmetry operation' ? ? 0.436968 -0.899477 -0.000127 596.73901 0.899477 0.436968 -0.000475 -137.09960 0.000482 0.000093 1.000000 19.81846 52 'point symmetry operation' ? ? -0.340196 0.940353 0.001587 162.43777 -0.940353 -0.340198 0.001089 930.23110 0.001564 -0.001122 0.999998 19.05314 53 'point symmetry operation' ? ? 0.237866 -0.971298 -0.000309 707.43330 0.971298 0.237866 -0.000373 -85.34653 0.000436 -0.000212 1.000000 17.87900 54 'point symmetry operation' ? ? -0.132524 0.991180 -0.000247 57.75707 -0.991180 -0.132523 0.000757 866.22452 0.000718 0.000345 1.000000 16.43949 55 'point symmetry operation' ? ? 0.028129 -0.999604 -0.000085 804.56619 0.999604 0.028129 0.000051 -11.59608 -0.000048 -0.000087 1.000000 15.85431 56 'point symmetry operation' ? ? 0.079382 0.996844 0.000206 -31.27420 -0.996843 0.079382 0.001839 781.69258 0.001817 -0.000351 0.999998 14.36235 57 'point symmetry operation' ? ? -0.184159 -0.982896 -0.000720 884.60425 0.982895 -0.184157 -0.001792 82.68003 0.001628 -0.001038 0.999998 13.70863 58 'point symmetry operation' ? ? 0.288151 0.957585 -0.000515 -100.15489 -0.957585 0.288151 -0.000804 681.57897 -0.000621 0.000725 1.000000 12.44532 59 'point symmetry operation' ? ? -0.388896 -0.921281 0.000642 942.29914 0.921282 -0.388896 0.000573 190.49000 -0.000279 0.000814 1.000000 11.23857 60 'point symmetry operation' ? ? 0.483879 0.875135 -0.000531 -146.37794 -0.875134 0.483879 0.000865 567.35611 0.001014 0.000046 0.999999 10.18662 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 15 ? GLY A 55 ? GLU U 15 GLY U 55 1 ? 41 HELX_P HELX_P2 AA2 GLU A 56 ? ALA A 118 ? GLU U 56 ALA U 118 1 ? 63 HELX_P HELX_P3 AA3 SER A 119 ? ILE A 143 ? SER U 119 ILE U 143 1 ? 25 HELX_P HELX_P4 AA4 LEU A 144 ? GLY A 146 ? LEU U 144 GLY U 146 5 ? 3 HELX_P HELX_P5 AA5 ASP A 147 ? ASP A 155 ? ASP U 147 ASP U 155 1 ? 9 HELX_P HELX_P6 AA6 GLU A 159 ? GLY A 172 ? GLU U 159 GLY U 172 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 9FN1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 U _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 31 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NH1 _pdbx_validate_close_contact.auth_asym_id_2 U _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 81 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id U _pdbx_validate_torsion.auth_seq_id 160 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -57.50 _pdbx_validate_torsion.psi -8.74 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id U _pdbx_validate_planes.auth_seq_id 76 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.242 _pdbx_validate_planes.type 'SIDE CHAIN' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9FN1 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9FN1 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.55 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 228688 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.6 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Loki CHMP4-7 rods' _em_entity_assembly.details 'Loki CHMP4-7 rods in the presence of CHMP1-3 and DNA' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9FN1 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 3000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9FN1 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9FN1 _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 U MET 1 ? A MET 1 2 1 Y 1 U GLY 2 ? A GLY 2 3 1 Y 1 U LEU 3 ? A LEU 3 4 1 Y 1 U LYS 4 ? A LYS 4 5 1 Y 1 U LYS 5 ? A LYS 5 6 1 Y 1 U LYS 6 ? A LYS 6 7 1 Y 1 U LEU 7 ? A LEU 7 8 1 Y 1 U PHE 8 ? A PHE 8 9 1 Y 1 U PRO 9 ? A PRO 9 10 1 Y 1 U ARG 10 ? A ARG 10 11 1 Y 1 U LYS 11 ? A LYS 11 12 1 Y 1 U LYS 12 ? A LYS 12 13 1 Y 1 U GLY 13 ? A GLY 13 14 1 Y 1 U LYS 14 ? A LYS 14 15 1 Y 1 U GLY 173 ? A GLY 173 16 1 Y 1 U THR 174 ? A THR 174 17 1 Y 1 U MET 175 ? A MET 175 18 1 Y 1 U PRO 176 ? A PRO 176 19 1 Y 1 U ASP 177 ? A ASP 177 20 1 Y 1 U ALA 178 ? A ALA 178 21 1 Y 1 U PRO 179 ? A PRO 179 22 1 Y 1 U SER 180 ? A SER 180 23 1 Y 1 U ASP 181 ? A ASP 181 24 1 Y 1 U ASP 182 ? A ASP 182 25 1 Y 1 U LEU 183 ? A LEU 183 26 1 Y 1 U GLN 184 ? A GLN 184 27 1 Y 1 U TYR 185 ? A TYR 185 28 1 Y 1 U ILE 186 ? A ILE 186 29 1 Y 1 U PRO 187 ? A PRO 187 30 1 Y 1 U GLU 188 ? A GLU 188 31 1 Y 1 U TYR 189 ? A TYR 189 32 1 Y 1 U GLY 190 ? A GLY 190 33 1 Y 1 U ASP 191 ? A ASP 191 34 1 Y 1 U GLU 192 ? A GLU 192 35 1 Y 1 U LEU 193 ? A LEU 193 36 1 Y 1 U GLU 194 ? A GLU 194 37 1 Y 1 U GLU 195 ? A GLU 195 38 1 Y 1 U GLU 196 ? A GLU 196 39 1 Y 1 U VAL 197 ? A VAL 197 40 1 Y 1 U GLU 198 ? A GLU 198 41 1 Y 1 U SER 199 ? A SER 199 42 1 Y 1 U LYS 200 ? A LYS 200 43 1 Y 1 U THR 201 ? A THR 201 44 1 Y 1 U LYS 202 ? A LYS 202 45 1 Y 1 U GLU 203 ? A GLU 203 46 1 Y 1 U LYS 204 ? A LYS 204 47 1 Y 1 U VAL 205 ? A VAL 205 48 1 Y 1 U GLN 206 ? A GLN 206 49 1 Y 1 U ALA 207 ? A ALA 207 50 1 Y 1 U GLU 208 ? A GLU 208 51 1 Y 1 U ILE 209 ? A ILE 209 52 1 Y 1 U GLU 210 ? A GLU 210 53 1 Y 1 U LYS 211 ? A LYS 211 54 1 Y 1 U LEU 212 ? A LEU 212 55 1 Y 1 U ARG 213 ? A ARG 213 56 1 Y 1 U LYS 214 ? A LYS 214 57 1 Y 1 U GLU 215 ? A GLU 215 58 1 Y 1 U LEU 216 ? A LEU 216 59 1 Y 1 U GLU 217 ? A GLU 217 60 1 Y 1 U SER 218 ? A SER 218 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # _em_admin.current_status REL _em_admin.deposition_date 2024-06-07 _em_admin.deposition_site PDBE _em_admin.entry_id 9FN1 _em_admin.last_update 2025-10-29 _em_admin.map_release_date 2025-04-16 _em_admin.title '360 A Loki CHMP4-7 rods' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_embedding.details ? _em_embedding.id 1 _em_embedding.material 'vitrous ice' _em_embedding.specimen_id 1 # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 3067280 _em_entity_assembly_naturalsource.organism 'Candidatus Lokiarchaeia archaeon' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain KKK44605.1 _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain BL21 # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 173.9 _em_helical_entity.axial_rise_per_subunit 1.05 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 30 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOCONTINUUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? PHENIX ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied YES _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Israel Science Foundation' Israel 1323/18 1 'Israel Science Foundation' Israel 2101/20 2 # _atom_sites.entry_id 9FN1 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ #