HEADER HYDROLASE 11-JUN-24 9FO1 TITLE FAMILY S1_16 SULFATASE FROM METAGENOMIC DATASET AMOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: K-CARRAGEENAN SULFATASE S1_16; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRYOBACTERACEAE; SOURCE 3 ORGANISM_TAXID: 1962910; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CARRAGEENAN SULFATASE, 4S-GALACTOSE SPECIFIC SULFATASE, MARINE KEYWDS 2 METAGENOME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.RHEIN-KNUDSEN,S.J.HORN,A.JEUDY,M.CZJZEK REVDAT 2 05-FEB-25 9FO1 1 JRNL REVDAT 1 22-JAN-25 9FO1 0 JRNL AUTH N.RHEIN-KNUDSEN,D.S.REYES-WEISS,L.J.KLAU,A.JEUDY,T.RORET, JRNL AUTH 2 R.STOKKE,V.G.H.EIJSINK,F.L.AACHMANN,M.CZJZEK,S.J.HORN JRNL TITL IDENTIFICATION AND CHARACTERIZATION OF A NEW THERMOPHILIC JRNL TITL 2 KAPPA-CARRAGEENAN SULFATASE. JRNL REF J.AGRIC.FOOD CHEM. V. 73 2044 2025 JRNL REFN ESSN 1520-5118 JRNL PMID 39797788 JRNL DOI 10.1021/ACS.JAFC.4C09751 REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1270 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.11 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3601 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.300 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.232 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.706 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3712 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3453 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5041 ; 1.873 ; 1.658 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7965 ; 1.389 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 451 ; 8.189 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 204 ;32.354 ;20.833 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 598 ;19.233 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;20.442 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 463 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4191 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 883 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1807 ; 7.128 ; 7.496 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1806 ; 7.019 ; 7.494 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2257 ; 9.775 ;11.250 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2258 ; 9.773 ;11.254 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1905 ; 8.585 ; 8.166 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1906 ; 8.583 ; 8.165 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2785 ;12.025 ;11.970 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15711 ;14.227 ;14.000 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15709 ;14.227 ;14.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9FO1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1292139297. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26345 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.110 REMARK 200 RESOLUTION RANGE LOW (A) : 48.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 42.10 REMARK 200 R MERGE (I) : 0.60000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE PH 5.0, 12% PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 103.15700 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 103.15700 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 103.15700 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 103.15700 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 103.15700 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 609 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 ARG A 5 REMARK 465 HIS A 458 REMARK 465 GLN A 459 REMARK 465 LEU A 460 REMARK 465 GLU A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 465 HIS A 464 REMARK 465 HIS A 465 REMARK 465 HIS A 466 REMARK 465 HIS A 467 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 6 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 112 OD2 ASP A 139 1.95 REMARK 500 NZ LYS A 112 OD1 ASP A 139 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 -137.31 -87.30 REMARK 500 ASP A 8 87.74 -150.67 REMARK 500 ASN A 50 51.64 -117.55 REMARK 500 CYS A 58 -71.94 -58.58 REMARK 500 PRO A 113 -6.47 -55.96 REMARK 500 TRP A 124 -72.64 -95.60 REMARK 500 GLN A 136 30.32 -160.95 REMARK 500 ALA A 143 -6.03 79.95 REMARK 500 TRP A 165 -135.60 -137.32 REMARK 500 LYS A 167 1.63 -60.91 REMARK 500 LYS A 222 -65.18 70.87 REMARK 500 LEU A 223 -118.27 -79.69 REMARK 500 MET A 268 88.34 -164.54 REMARK 500 TYR A 269 56.86 97.06 REMARK 500 ALA A 285 -140.34 63.84 REMARK 500 ASP A 402 47.46 -162.10 REMARK 500 ALA A 454 92.53 -57.52 REMARK 500 ASP A 455 119.20 -31.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 129 PRO A 130 56.96 REMARK 500 ASP A 455 PRO A 456 79.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 18 OD1 REMARK 620 2 ASP A 19 OD1 80.5 REMARK 620 3 ASP A 263 OD1 71.6 100.0 REMARK 620 4 ASP A 263 OD2 76.2 147.0 50.5 REMARK 620 5 ASN A 264 OD1 143.1 93.8 73.7 91.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 102 O REMARK 620 2 GLU A 104 O 80.4 REMARK 620 3 GLU A 109 OE1 139.0 94.6 REMARK 620 4 GLU A 109 OE2 152.9 72.5 46.2 REMARK 620 5 GLN A 136 OE1 91.0 69.8 125.7 79.9 REMARK 620 N 1 2 3 4 DBREF 9FO1 A 1 467 PDB 9FO1 9FO1 1 467 SEQRES 1 A 467 MET GLY ALA GLN ARG PRO PRO ASP LYS LEU ASN PHE ILE SEQRES 2 A 467 ILE ILE LEU ILE ASP ASP TYR GLY TRP THR ASP SER THR SEQRES 3 A 467 CYS TYR GLY SER THR PHE TYR GLU THR PRO ASN ILE ASP SEQRES 4 A 467 ARG LEU ALA ARG GLU GLY MET ARG PHE THR ASN ALA TYR SEQRES 5 A 467 ALA ALA CYS PRO VAL CYS SER PRO THR ARG ALA SER ILE SEQRES 6 A 467 LEU THR GLY LYS TYR PRO ALA HIS LEU HIS LEU THR ASP SEQRES 7 A 467 TRP ILE PRO GLY ARG LYS GLN TRP PRO THR SER LYS LEU SEQRES 8 A 467 LEU GLY ALA PRO PHE TYR GLN GLU LEU PRO LEU TRP GLU SEQRES 9 A 467 THR THR ILE ALA GLU ARG LEU LYS PRO LEU GLY TYR THR SEQRES 10 A 467 THR ALA ALA MET GLY LYS TRP HIS LEU GLY HIS GLU PRO SEQRES 11 A 467 TYR TYR PRO GLU ARG GLN GLY PHE ASP ILE ASN VAL ALA SEQRES 12 A 467 GLY THR PHE ARG GLY HIS PRO GLU SER TYR PHE GLY PRO SEQRES 13 A 467 PHE ASP LEU PRO ASN PHE ARG GLY TRP THR LYS ASN ASP SEQRES 14 A 467 TYR LEU THR ASP ARG LEU THR ASP LYS ALA LEU GLN PHE SEQRES 15 A 467 LEU GLU GLU ASN ARG GLN ARG PRO PHE PHE LEU TYR LEU SEQRES 16 A 467 ALA HIS PHE ALA VAL HIS THR PRO LEU GLN ALA LYS ALA SEQRES 17 A 467 GLU MET ILE ALA LYS TYR GLU ARG LYS ALA ARG GLY ARG SEQRES 18 A 467 LYS LEU GLN LYS ASN PRO THR TYR ALA ALA MET ILE GLU SEQRES 19 A 467 SER MET ASP GLN GLY VAL GLY ARG VAL MET SER LYS LEU SEQRES 20 A 467 GLU ASP LEU LYS ILE ALA ASP HIS THR VAL ILE ILE PHE SEQRES 21 A 467 THR SER ASP ASN GLY GLY LEU MET TYR GLU GLY SER ARG SEQRES 22 A 467 ARG GLU PRO VAL THR SER ASN ARG PRO LEU ARG ALA GLY SEQRES 23 A 467 LYS GLY HIS LEU TYR GLU GLY GLY VAL ARG VAL PRO LEU SEQRES 24 A 467 ILE ILE ARG TRP PRO GLY VAL VAL LYS PRO GLY THR THR SEQRES 25 A 467 CYS ASP VAL PRO ALA CYS SER VAL ASP PHE PHE PRO THR SEQRES 26 A 467 ILE GLU GLU MET ALA GLY LEU ARG HIS ASP PRO LYS LEU SEQRES 27 A 467 ALA LEU ASP GLY VAL SER LEU THR PRO LEU LEU ARG ARG SEQRES 28 A 467 LYS GLY GLY PHE LYS PRO ARG ALA LEU TYR TRP HIS TYR SEQRES 29 A 467 PRO HIS TYR SER ASN GLN GLY GLY VAL PRO GLY GLY ALA SEQRES 30 A 467 ILE ARG GLU GLY ASN LEU LYS LEU ILE GLU PHE TYR GLU SEQRES 31 A 467 ASP SER HIS VAL GLU LEU TYR ASP LEU SER GLU ASP ILE SEQRES 32 A 467 GLY GLU ARG HIS ASN LEU ALA LYS GLU MET PRO ASP LYS SEQRES 33 A 467 ALA ALA GLU LEU GLN ALA LYS LEU LYS ALA TRP ARG ALA SEQRES 34 A 467 SER VAL ARG ALA THR MET PRO THR VAL ASN PRO ASN TYR SEQRES 35 A 467 ASP PRO ALA ARG ALA ASP GLN GLY LEU THR GLY ALA ASP SEQRES 36 A 467 PRO ALA HIS GLN LEU GLU HIS HIS HIS HIS HIS HIS HET CA A 501 1 HET CA A 502 1 HET GOL A 503 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA 2(CA 2+) FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *26(H2 O) HELIX 1 AA1 SER A 25 GLY A 29 5 5 HELIX 2 AA2 THR A 35 GLU A 44 1 10 HELIX 3 AA3 VAL A 57 GLY A 68 1 12 HELIX 4 AA4 TYR A 70 HIS A 75 1 6 HELIX 5 AA5 THR A 106 LYS A 112 1 7 HELIX 6 AA6 PRO A 113 GLY A 115 5 3 HELIX 7 AA7 TYR A 132 GLN A 136 5 5 HELIX 8 AA8 TYR A 170 ASN A 186 1 17 HELIX 9 AA9 LYS A 207 ARG A 219 1 13 HELIX 10 AB1 ASN A 226 LEU A 250 1 25 HELIX 11 AB2 ILE A 252 ASP A 254 5 3 HELIX 12 AB3 TYR A 291 GLY A 294 5 4 HELIX 13 AB4 ASP A 321 ALA A 330 1 10 HELIX 14 AB5 LEU A 345 ARG A 350 1 6 HELIX 15 AB6 MET A 413 VAL A 431 1 19 HELIX 16 AB7 ASP A 443 ALA A 447 5 5 SHEET 1 AA1 8 ILE A 140 VAL A 142 0 SHEET 2 AA1 8 THR A 117 GLY A 122 1 N GLY A 122 O VAL A 142 SHEET 3 AA1 8 PHE A 191 ALA A 196 1 O TYR A 194 N ALA A 119 SHEET 4 AA1 8 ASN A 11 ILE A 17 1 N ILE A 14 O LEU A 195 SHEET 5 AA1 8 THR A 256 SER A 262 1 O ILE A 259 N ILE A 15 SHEET 6 AA1 8 LEU A 299 ARG A 302 -1 O ILE A 300 N PHE A 260 SHEET 7 AA1 8 MET A 46 PHE A 48 -1 N PHE A 48 O LEU A 299 SHEET 8 AA1 8 THR A 312 CYS A 313 1 O CYS A 313 N ARG A 47 SHEET 1 AA2 3 ARG A 296 VAL A 297 0 SHEET 2 AA2 3 ALA A 51 TYR A 52 -1 N ALA A 51 O VAL A 297 SHEET 3 AA2 3 ALA A 317 CYS A 318 1 O ALA A 317 N TYR A 52 SHEET 1 AA3 2 LEU A 91 LEU A 92 0 SHEET 2 AA3 2 THR A 437 VAL A 438 -1 O THR A 437 N LEU A 92 SHEET 1 AA4 2 ASP A 158 LEU A 159 0 SHEET 2 AA4 2 PHE A 162 ARG A 163 -1 O PHE A 162 N LEU A 159 SHEET 1 AA5 4 ALA A 359 TYR A 364 0 SHEET 2 AA5 4 GLY A 375 GLU A 380 -1 O GLY A 375 N TYR A 364 SHEET 3 AA5 4 LEU A 383 PHE A 388 -1 O GLU A 387 N GLY A 376 SHEET 4 AA5 4 VAL A 394 ASP A 398 -1 O GLU A 395 N ILE A 386 LINK OD1 ASP A 18 CA CA A 501 1555 1555 2.30 LINK OD1 ASP A 19 CA CA A 501 1555 1555 2.19 LINK O LEU A 102 CA CA A 502 1555 1555 2.30 LINK O GLU A 104 CA CA A 502 1555 1555 2.91 LINK OE1 GLU A 109 CA CA A 502 1555 1555 3.06 LINK OE2 GLU A 109 CA CA A 502 1555 1555 2.31 LINK OE1 GLN A 136 CA CA A 502 1555 1555 2.73 LINK OD1 ASP A 263 CA CA A 501 1555 1555 2.82 LINK OD2 ASP A 263 CA CA A 501 1555 1555 2.16 LINK OD1 ASN A 264 CA CA A 501 1555 1555 2.23 CISPEP 1 ILE A 80 PRO A 81 0 1.95 CISPEP 2 GLY A 155 PRO A 156 0 -6.17 CISPEP 3 ALA A 199 VAL A 200 0 18.07 CISPEP 4 THR A 202 PRO A 203 0 -0.47 CISPEP 5 ARG A 281 PRO A 282 0 4.09 CRYST1 206.314 206.314 206.314 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004847 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004847 0.00000