HEADER HYDROLASE 27-JUN-24 9FVF
TITLE UMG-SP3 AMIDASE FROM UNCULTURED BACTERIUM
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: AMIDASE UMG-SP3;
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM;
SOURCE 3 ORGANISM_TAXID: 77133;
SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333
KEYWDS AMIDASE, URETHANE DEGRADATION, PLASTIC RECYCLING, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR L.ROTILIO,J.P.MORTH
REVDAT 2 19-FEB-25 9FVF 1 JRNL
REVDAT 1 05-FEB-25 9FVF 0
JRNL AUTH L.ROTILIO,T.BAYER,H.MEINERT,L.M.C.TEIXEIRA,M.B.JOHANSEN,
JRNL AUTH 2 A.SOMMERFELDT,A.R.PETERSEN,A.SANDAHL,M.B.KELLER,J.HOLCK,
JRNL AUTH 3 P.PAIVA,D.E.OTZEN,U.T.BORNSCHEUER,R.WEI,P.A.FERNANDES,
JRNL AUTH 4 M.J.RAMOS,P.WESTH,J.P.MORTH
JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF AN AMIDASE
JRNL TITL 2 TARGETING A POLYURETHANE FOR SUSTAINABLE RECYCLING.
JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 64 19535 2025
JRNL REFN ESSN 1521-3773
JRNL PMID 39611359
JRNL DOI 10.1002/ANIE.202419535
REMARK 2
REMARK 2 RESOLUTION. 2.32 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.42
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 3 NUMBER OF REFLECTIONS : 50769
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.191
REMARK 3 R VALUE (WORKING SET) : 0.188
REMARK 3 FREE R VALUE : 0.250
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740
REMARK 3 FREE R VALUE TEST SET COUNT : 2404
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 47.4200 - 5.9700 1.00 3136 149 0.1580 0.2094
REMARK 3 2 5.9700 - 4.7400 1.00 2968 131 0.1559 0.1838
REMARK 3 3 4.7400 - 4.1400 1.00 2892 157 0.1329 0.2075
REMARK 3 4 4.1400 - 3.7700 1.00 2892 139 0.1532 0.2212
REMARK 3 5 3.7700 - 3.5000 0.99 2849 136 0.1682 0.2477
REMARK 3 6 3.5000 - 3.2900 1.00 2862 146 0.2077 0.2949
REMARK 3 7 3.2900 - 3.1200 1.00 2815 142 0.2071 0.2474
REMARK 3 8 3.1200 - 2.9900 1.00 2820 152 0.2061 0.2684
REMARK 3 9 2.9900 - 2.8700 1.00 2840 140 0.2151 0.2778
REMARK 3 10 2.8700 - 2.7700 0.99 2816 127 0.2433 0.3242
REMARK 3 11 2.7700 - 2.6900 0.99 2781 149 0.2591 0.3085
REMARK 3 12 2.6900 - 2.6100 0.99 2802 141 0.2574 0.3568
REMARK 3 13 2.6100 - 2.5400 1.00 2817 130 0.2642 0.3636
REMARK 3 14 2.5400 - 2.4800 1.00 2792 139 0.2736 0.3197
REMARK 3 15 2.4800 - 2.4200 1.00 2787 136 0.2845 0.3137
REMARK 3 16 2.4200 - 2.3700 0.99 2760 160 0.3118 0.3576
REMARK 3 17 2.3700 - 2.3200 0.98 2736 130 0.3241 0.3860
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.10
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.030
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.011 6554
REMARK 3 ANGLE : 1.141 8935
REMARK 3 CHIRALITY : 0.055 1035
REMARK 3 PLANARITY : 0.011 1173
REMARK 3 DIHEDRAL : 6.869 943
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 11
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 45 )
REMARK 3 ORIGIN FOR THE GROUP (A): -33.6402 -38.1061 7.0296
REMARK 3 T TENSOR
REMARK 3 T11: 0.4841 T22: 0.8575
REMARK 3 T33: 0.6386 T12: -0.0486
REMARK 3 T13: -0.0835 T23: -0.0111
REMARK 3 L TENSOR
REMARK 3 L11: 2.5236 L22: 1.0972
REMARK 3 L33: 1.0960 L12: -0.4192
REMARK 3 L13: -0.8318 L23: 0.5174
REMARK 3 S TENSOR
REMARK 3 S11: -0.0937 S12: 0.3079 S13: -0.2566
REMARK 3 S21: -0.0867 S22: -0.0593 S23: 0.4936
REMARK 3 S31: 0.1321 S32: -1.0477 S33: 0.0746
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 166 )
REMARK 3 ORIGIN FOR THE GROUP (A): -24.2739 -43.4045 14.0527
REMARK 3 T TENSOR
REMARK 3 T11: 0.3976 T22: 0.5906
REMARK 3 T33: 0.4925 T12: -0.1635
REMARK 3 T13: -0.0366 T23: 0.0027
REMARK 3 L TENSOR
REMARK 3 L11: 1.2219 L22: 1.2045
REMARK 3 L33: 2.3154 L12: -0.2525
REMARK 3 L13: 0.0858 L23: -0.3080
REMARK 3 S TENSOR
REMARK 3 S11: 0.0414 S12: -0.1762 S13: -0.2378
REMARK 3 S21: -0.0430 S22: 0.0247 S23: 0.3368
REMARK 3 S31: 0.5467 S32: -0.7045 S33: -0.0494
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 213 )
REMARK 3 ORIGIN FOR THE GROUP (A): -16.0653 -37.8709 22.5862
REMARK 3 T TENSOR
REMARK 3 T11: 0.4818 T22: 0.4449
REMARK 3 T33: 0.5479 T12: -0.0466
REMARK 3 T13: 0.0219 T23: 0.0219
REMARK 3 L TENSOR
REMARK 3 L11: 1.5797 L22: 1.1950
REMARK 3 L33: 1.8349 L12: 1.0380
REMARK 3 L13: -0.1644 L23: 0.6994
REMARK 3 S TENSOR
REMARK 3 S11: -0.0169 S12: -0.1734 S13: -0.2455
REMARK 3 S21: 0.2205 S22: -0.0873 S23: -0.0028
REMARK 3 S31: 0.4836 S32: -0.1052 S33: 0.1148
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 242 )
REMARK 3 ORIGIN FOR THE GROUP (A): -26.5056 -29.1095 25.0483
REMARK 3 T TENSOR
REMARK 3 T11: 0.4732 T22: 0.7455
REMARK 3 T33: 0.6345 T12: 0.0338
REMARK 3 T13: -0.0317 T23: 0.0018
REMARK 3 L TENSOR
REMARK 3 L11: 2.2278 L22: 1.0068
REMARK 3 L33: 2.5111 L12: -0.6262
REMARK 3 L13: -0.2663 L23: 0.0120
REMARK 3 S TENSOR
REMARK 3 S11: -0.0379 S12: 0.0469 S13: 0.0791
REMARK 3 S21: -0.0166 S22: 0.0657 S23: 0.5275
REMARK 3 S31: -0.2735 S32: -0.7801 S33: 0.0049
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 279 )
REMARK 3 ORIGIN FOR THE GROUP (A): -11.1630 -13.7680 18.1747
REMARK 3 T TENSOR
REMARK 3 T11: 0.9136 T22: 0.4026
REMARK 3 T33: 0.5565 T12: -0.0548
REMARK 3 T13: -0.0681 T23: 0.0087
REMARK 3 L TENSOR
REMARK 3 L11: 1.7739 L22: 2.7528
REMARK 3 L33: 4.3115 L12: 0.0758
REMARK 3 L13: 0.0610 L23: 0.7165
REMARK 3 S TENSOR
REMARK 3 S11: -0.1227 S12: 0.0768 S13: 0.4680
REMARK 3 S21: -0.1113 S22: 0.1096 S23: -0.0988
REMARK 3 S31: -1.5246 S32: -0.0635 S33: 0.0404
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 280 THROUGH 308 )
REMARK 3 ORIGIN FOR THE GROUP (A): -2.7331 -25.0041 27.7655
REMARK 3 T TENSOR
REMARK 3 T11: 0.6164 T22: 0.6196
REMARK 3 T33: 0.5259 T12: -0.1289
REMARK 3 T13: -0.0538 T23: -0.0089
REMARK 3 L TENSOR
REMARK 3 L11: 1.8053 L22: 1.8117
REMARK 3 L33: 2.6019 L12: 0.5541
REMARK 3 L13: 0.1219 L23: -0.2752
REMARK 3 S TENSOR
REMARK 3 S11: -0.2271 S12: -0.0661 S13: 0.1336
REMARK 3 S21: 0.4372 S22: 0.1795 S23: -0.6130
REMARK 3 S31: -0.5957 S32: 0.4060 S33: 0.0276
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 309 THROUGH 344 )
REMARK 3 ORIGIN FOR THE GROUP (A): -1.2410 -35.5633 35.3202
REMARK 3 T TENSOR
REMARK 3 T11: 0.5402 T22: 0.6007
REMARK 3 T33: 0.4475 T12: -0.0434
REMARK 3 T13: -0.0024 T23: -0.0191
REMARK 3 L TENSOR
REMARK 3 L11: 3.5672 L22: 3.4038
REMARK 3 L33: 2.8286 L12: -0.0209
REMARK 3 L13: 0.6603 L23: -1.9671
REMARK 3 S TENSOR
REMARK 3 S11: -0.3457 S12: -0.2896 S13: -0.1840
REMARK 3 S21: 0.0959 S22: 0.3656 S23: -0.5387
REMARK 3 S31: -0.1689 S32: 0.4259 S33: -0.0260
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 345 THROUGH 439 )
REMARK 3 ORIGIN FOR THE GROUP (A): -10.4428 -25.1897 16.4397
REMARK 3 T TENSOR
REMARK 3 T11: 0.4614 T22: 0.4135
REMARK 3 T33: 0.4688 T12: -0.0567
REMARK 3 T13: -0.0468 T23: 0.0214
REMARK 3 L TENSOR
REMARK 3 L11: 1.1315 L22: 1.6916
REMARK 3 L33: 3.6443 L12: 0.2525
REMARK 3 L13: 0.3256 L23: 0.3513
REMARK 3 S TENSOR
REMARK 3 S11: -0.0409 S12: 0.0428 S13: 0.0991
REMARK 3 S21: -0.1104 S22: -0.0288 S23: -0.0747
REMARK 3 S31: -0.6444 S32: 0.0520 S33: 0.0625
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 292 )
REMARK 3 ORIGIN FOR THE GROUP (A): -20.1708 -30.8387 59.3057
REMARK 3 T TENSOR
REMARK 3 T11: 0.3045 T22: 0.6011
REMARK 3 T33: 0.4199 T12: 0.0512
REMARK 3 T13: 0.0198 T23: 0.0274
REMARK 3 L TENSOR
REMARK 3 L11: 1.1359 L22: 1.5796
REMARK 3 L33: 3.0047 L12: 0.1958
REMARK 3 L13: 0.2824 L23: 0.2082
REMARK 3 S TENSOR
REMARK 3 S11: -0.0967 S12: -0.1713 S13: -0.0168
REMARK 3 S21: 0.0604 S22: -0.0019 S23: 0.1404
REMARK 3 S31: 0.0983 S32: -0.5041 S33: 0.0946
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 293 THROUGH 344 )
REMARK 3 ORIGIN FOR THE GROUP (A): -10.4214 -50.2198 43.6074
REMARK 3 T TENSOR
REMARK 3 T11: 0.7527 T22: 0.5279
REMARK 3 T33: 0.5545 T12: 0.0036
REMARK 3 T13: 0.0058 T23: 0.0555
REMARK 3 L TENSOR
REMARK 3 L11: 1.0187 L22: 3.1899
REMARK 3 L33: 3.2870 L12: -0.1261
REMARK 3 L13: -1.5749 L23: 0.1870
REMARK 3 S TENSOR
REMARK 3 S11: -0.1611 S12: 0.1111 S13: -0.4003
REMARK 3 S21: 0.2187 S22: 0.1107 S23: -0.2070
REMARK 3 S31: 0.8780 S32: -0.0103 S33: -0.0066
REMARK 3 TLS GROUP : 11
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 345 THROUGH 439 )
REMARK 3 ORIGIN FOR THE GROUP (A): -23.8963 -45.7491 59.6156
REMARK 3 T TENSOR
REMARK 3 T11: 0.6069 T22: 0.7489
REMARK 3 T33: 0.5383 T12: -0.1456
REMARK 3 T13: 0.0427 T23: 0.0724
REMARK 3 L TENSOR
REMARK 3 L11: 1.2880 L22: 1.4013
REMARK 3 L33: 1.7846 L12: 0.6727
REMARK 3 L13: -0.4016 L23: 0.8951
REMARK 3 S TENSOR
REMARK 3 S11: -0.0099 S12: -0.3772 S13: -0.2125
REMARK 3 S21: 0.2766 S22: -0.0187 S23: 0.1807
REMARK 3 S31: 0.6152 S32: -0.6671 S33: 0.0247
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 9FVF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUN-24.
REMARK 100 THE DEPOSITION ID IS D_1292139691.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 15-SEP-23
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID23-2
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.873130
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : POINTLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50769
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320
REMARK 200 RESOLUTION RANGE LOW (A) : 47.420
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 200 DATA REDUNDANCY : 2.000
REMARK 200 R MERGE (I) : 0.03706
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.8600
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.64490
REMARK 200 R SYM FOR SHELL (I) : 0.91210
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.250
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.80
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5 4 M AMMONIUM
REMARK 280 ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 139.05700
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.35350
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.35350
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 208.58550
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.35350
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.35350
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.52850
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.35350
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.35350
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 208.58550
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.35350
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.35350
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.52850
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 139.05700
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET B 1
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 MET A 1 CG SD CE
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HD22 ASN A 323 O GLN B 310 1.59
REMARK 500 O ARG B 419 HG SER B 422 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 LEU B 354 CB - CG - CD2 ANGL. DEV. = -10.5 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 2 34.27 -74.81
REMARK 500 LEU A 125 18.08 58.11
REMARK 500 ALA A 126 37.93 -96.62
REMARK 500 TRP A 128 30.43 -89.57
REMARK 500 ASP A 143 104.84 -163.61
REMARK 500 SER A 152 48.91 -90.99
REMARK 500 LEU A 212 -44.91 72.86
REMARK 500 ASP A 243 20.57 -152.07
REMARK 500 THR A 244 147.55 -178.03
REMARK 500 ASP A 292 99.47 -58.87
REMARK 500 TRP A 421 -2.78 79.69
REMARK 500 SER A 422 43.00 -95.76
REMARK 500 ALA B 126 47.85 -106.81
REMARK 500 TRP B 128 31.82 -89.84
REMARK 500 ASP B 143 97.14 -167.47
REMARK 500 SER B 152 44.94 -88.74
REMARK 500 ILE B 172 -15.99 -140.58
REMARK 500 LEU B 212 -50.85 76.18
REMARK 500 ASP B 292 107.38 -57.36
REMARK 500 LYS B 369 33.48 -99.75
REMARK 500 SER B 422 40.54 -100.84
REMARK 500
REMARK 500 REMARK: NULL
DBREF 9FVF A 1 439 PDB 9FVF 9FVF 1 439
DBREF 9FVF B 1 439 PDB 9FVF 9FVF 1 439
SEQRES 1 A 439 MET SER GLU LEU SER ALA ILE GLU THR ALA ALA ALA ILE
SEQRES 2 A 439 ALA GLY GLY SER MET THR ALA LEU GLU ALA CYS ASP ALA
SEQRES 3 A 439 ALA ILE ALA ARG ILE GLU GLN ARG ASP GLY PRO ILE ASN
SEQRES 4 A 439 ALA VAL VAL VAL ARG ASP PHE ASP ARG ALA ARG GLU ALA
SEQRES 5 A 439 ALA LYS ALA ALA ASP GLY GLU VAL ALA ALA GLY VAL SER
SEQRES 6 A 439 LYS PRO LEU LEU GLY VAL PRO MET THR ILE LYS GLU SER
SEQRES 7 A 439 ILE ASP ILE ALA GLY LEU PRO THR SER TRP GLY PHE ALA
SEQRES 8 A 439 GLU HIS ALA ASP HIS ILE ALA THR ALA ASP SER VAL VAL
SEQRES 9 A 439 VAL SER ARG LEU LYS ALA ALA GLY ALA VAL PHE LEU GLY
SEQRES 10 A 439 LYS THR ASN ILE PRO VAL ALA LEU ALA ASP TRP GLN SER
SEQRES 11 A 439 SER ASN PRO ASN TYR GLY ARG THR ASN ASN PRO HIS ASP
SEQRES 12 A 439 LEU THR ARG SER ALA GLY GLY SER SER GLY GLY ALA ALA
SEQRES 13 A 439 ALA ALA LEU ALA ALA GLY MET VAL PRO LEU GLU TYR GLY
SEQRES 14 A 439 SER ASP ILE GLY GLY SER ILE ARG VAL PRO ALA HIS PHE
SEQRES 15 A 439 CYS GLY VAL TRP GLY LEU LYS THR THR PHE ASP ALA VAL
SEQRES 16 A 439 SER LEU GLU GLY HIS TYR LEU PRO ARG THR ASP GLY ALA
SEQRES 17 A 439 ARG GLY GLU LEU GLY VAL VAL GLY PRO MET ALA ARG ASN
SEQRES 18 A 439 PRO GLN ASP LEU ALA LEU ALA LEU ASP LEU THR SER ARG
SEQRES 19 A 439 ILE ALA LEU PRO ILE ALA ARG ILE ASP THR LEU ASN GLY
SEQRES 20 A 439 LEU ARG ILE LEU LEU LEU THR HIS HIS PRO ARG ALA ALA
SEQRES 21 A 439 ALA ASP SER ALA VAL VAL ALA ALA VAL GLU LYS ALA ALA
SEQRES 22 A 439 GLU SER CYS ALA ALA GLN GLY ALA GLN VAL SER THR SER
SEQRES 23 A 439 ASN ALA ASP LEU PRO ASP LEU SER LYS LEU VAL SER ASP
SEQRES 24 A 439 TYR THR ARG MET LEU LEU ILE VAL LEU ALA GLN GLY LYS
SEQRES 25 A 439 ALA PRO GLU GLY THR GLU PRO VAL SER LEU ASN ALA TRP
SEQRES 26 A 439 TYR GLY MET LEU ASP ASP GLN ALA ARG THR ILE ARG GLY
SEQRES 27 A 439 PHE ASP ARG LEU PHE ASP SER PHE ASP ALA ILE PHE CYS
SEQRES 28 A 439 PRO VAL LEU GLY THR SER ALA PHE PRO HIS SER ASP GLU
SEQRES 29 A 439 ALA ASP TRP GLY LYS ARG THR LEU THR ILE ASP GLY ALA
SEQRES 30 A 439 ASP THR PRO PHE GLY SER GLN LEU ALA TRP ILE SER MET
SEQRES 31 A 439 ALA THR TYR CYS GLY MET PRO ALA LEU SER MET PRO VAL
SEQRES 32 A 439 GLY THR ASP ALA ASN GLY LEU PRO ILE GLY LEU GLN ILE
SEQRES 33 A 439 ILE THR ARG ASN TRP SER ASP HIS ASP ALA VAL ARG ILE
SEQRES 34 A 439 GLY ALA LEU VAL ALA ASP ALA LEU ALA ALA
SEQRES 1 B 439 MET SER GLU LEU SER ALA ILE GLU THR ALA ALA ALA ILE
SEQRES 2 B 439 ALA GLY GLY SER MET THR ALA LEU GLU ALA CYS ASP ALA
SEQRES 3 B 439 ALA ILE ALA ARG ILE GLU GLN ARG ASP GLY PRO ILE ASN
SEQRES 4 B 439 ALA VAL VAL VAL ARG ASP PHE ASP ARG ALA ARG GLU ALA
SEQRES 5 B 439 ALA LYS ALA ALA ASP GLY GLU VAL ALA ALA GLY VAL SER
SEQRES 6 B 439 LYS PRO LEU LEU GLY VAL PRO MET THR ILE LYS GLU SER
SEQRES 7 B 439 ILE ASP ILE ALA GLY LEU PRO THR SER TRP GLY PHE ALA
SEQRES 8 B 439 GLU HIS ALA ASP HIS ILE ALA THR ALA ASP SER VAL VAL
SEQRES 9 B 439 VAL SER ARG LEU LYS ALA ALA GLY ALA VAL PHE LEU GLY
SEQRES 10 B 439 LYS THR ASN ILE PRO VAL ALA LEU ALA ASP TRP GLN SER
SEQRES 11 B 439 SER ASN PRO ASN TYR GLY ARG THR ASN ASN PRO HIS ASP
SEQRES 12 B 439 LEU THR ARG SER ALA GLY GLY SER SER GLY GLY ALA ALA
SEQRES 13 B 439 ALA ALA LEU ALA ALA GLY MET VAL PRO LEU GLU TYR GLY
SEQRES 14 B 439 SER ASP ILE GLY GLY SER ILE ARG VAL PRO ALA HIS PHE
SEQRES 15 B 439 CYS GLY VAL TRP GLY LEU LYS THR THR PHE ASP ALA VAL
SEQRES 16 B 439 SER LEU GLU GLY HIS TYR LEU PRO ARG THR ASP GLY ALA
SEQRES 17 B 439 ARG GLY GLU LEU GLY VAL VAL GLY PRO MET ALA ARG ASN
SEQRES 18 B 439 PRO GLN ASP LEU ALA LEU ALA LEU ASP LEU THR SER ARG
SEQRES 19 B 439 ILE ALA LEU PRO ILE ALA ARG ILE ASP THR LEU ASN GLY
SEQRES 20 B 439 LEU ARG ILE LEU LEU LEU THR HIS HIS PRO ARG ALA ALA
SEQRES 21 B 439 ALA ASP SER ALA VAL VAL ALA ALA VAL GLU LYS ALA ALA
SEQRES 22 B 439 GLU SER CYS ALA ALA GLN GLY ALA GLN VAL SER THR SER
SEQRES 23 B 439 ASN ALA ASP LEU PRO ASP LEU SER LYS LEU VAL SER ASP
SEQRES 24 B 439 TYR THR ARG MET LEU LEU ILE VAL LEU ALA GLN GLY LYS
SEQRES 25 B 439 ALA PRO GLU GLY THR GLU PRO VAL SER LEU ASN ALA TRP
SEQRES 26 B 439 TYR GLY MET LEU ASP ASP GLN ALA ARG THR ILE ARG GLY
SEQRES 27 B 439 PHE ASP ARG LEU PHE ASP SER PHE ASP ALA ILE PHE CYS
SEQRES 28 B 439 PRO VAL LEU GLY THR SER ALA PHE PRO HIS SER ASP GLU
SEQRES 29 B 439 ALA ASP TRP GLY LYS ARG THR LEU THR ILE ASP GLY ALA
SEQRES 30 B 439 ASP THR PRO PHE GLY SER GLN LEU ALA TRP ILE SER MET
SEQRES 31 B 439 ALA THR TYR CYS GLY MET PRO ALA LEU SER MET PRO VAL
SEQRES 32 B 439 GLY THR ASP ALA ASN GLY LEU PRO ILE GLY LEU GLN ILE
SEQRES 33 B 439 ILE THR ARG ASN TRP SER ASP HIS ASP ALA VAL ARG ILE
SEQRES 34 B 439 GLY ALA LEU VAL ALA ASP ALA LEU ALA ALA
HET PG6 A 501 44
HET SO4 A 502 5
HET SO4 A 503 5
HET SO4 B 501 5
HETNAM PG6 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-
HETNAM 2 PG6 ETHOXY}-ETHANE
HETNAM SO4 SULFATE ION
FORMUL 3 PG6 C12 H26 O6
FORMUL 4 SO4 3(O4 S 2-)
FORMUL 7 HOH *56(H2 O)
HELIX 1 AA1 SER A 5 GLY A 16 1 12
HELIX 2 AA2 THR A 19 ASP A 35 1 17
HELIX 3 AA3 ASP A 45 ALA A 62 1 18
HELIX 4 AA4 PHE A 90 ALA A 94 5 5
HELIX 5 AA5 SER A 102 ALA A 111 1 10
HELIX 6 AA6 PRO A 122 ALA A 126 5 5
HELIX 7 AA7 SER A 152 ALA A 161 1 10
HELIX 8 AA8 ILE A 176 GLY A 184 1 9
HELIX 9 AA9 ASN A 221 SER A 233 1 13
HELIX 10 AB1 ASP A 262 GLN A 279 1 18
HELIX 11 AB2 ASP A 292 GLN A 310 1 19
HELIX 12 AB3 SER A 321 PHE A 343 1 23
HELIX 13 AB4 ASP A 366 LYS A 369 5 4
HELIX 14 AB5 GLN A 384 GLY A 395 1 12
HELIX 15 AB6 SER A 422 ALA A 439 1 18
HELIX 16 AB7 SER B 5 GLY B 15 1 11
HELIX 17 AB8 THR B 19 ASP B 35 1 17
HELIX 18 AB9 ASP B 45 ALA B 62 1 18
HELIX 19 AC1 PHE B 90 ALA B 94 5 5
HELIX 20 AC2 SER B 102 ALA B 111 1 10
HELIX 21 AC3 PRO B 122 ALA B 126 5 5
HELIX 22 AC4 SER B 152 ALA B 161 1 10
HELIX 23 AC5 ILE B 176 GLY B 184 1 9
HELIX 24 AC6 ASN B 221 SER B 233 1 13
HELIX 25 AC7 ASP B 262 GLN B 279 1 18
HELIX 26 AC8 ASP B 292 ALA B 309 1 18
HELIX 27 AC9 SER B 321 PHE B 343 1 23
HELIX 28 AD1 ASP B 366 LYS B 369 5 4
HELIX 29 AD2 GLY B 382 GLN B 384 5 3
HELIX 30 AD3 LEU B 385 GLY B 395 1 11
HELIX 31 AD4 SER B 422 ALA B 439 1 18
SHEET 1 AA1 3 VAL A 43 ARG A 44 0
SHEET 2 AA1 3 VAL A 114 THR A 119 -1 O LYS A 118 N VAL A 43
SHEET 3 AA1 3 PRO A 72 LYS A 76 1 N MET A 73 O LEU A 116
SHEET 1 AA2 2 SER A 131 ASN A 132 0
SHEET 2 AA2 2 GLY A 136 ARG A 137 -1 O GLY A 136 N ASN A 132
SHEET 1 AA3 2 ASN A 139 ASN A 140 0
SHEET 2 AA3 2 ASP A 143 SER A 147 -1 O ARG A 146 N ASN A 140
SHEET 1 AA4 8 LEU A 166 ASP A 171 0
SHEET 2 AA4 8 VAL A 214 ALA A 219 -1 O GLY A 216 N GLY A 169
SHEET 3 AA4 8 TRP A 186 LYS A 189 -1 N TRP A 186 O ALA A 219
SHEET 4 AA4 8 ALA A 398 THR A 405 -1 O ALA A 398 N LYS A 189
SHEET 5 AA4 8 PRO A 411 ILE A 417 -1 O LEU A 414 N MET A 401
SHEET 6 AA4 8 ALA A 348 PRO A 352 -1 N CYS A 351 O GLN A 415
SHEET 7 AA4 8 ARG A 249 LEU A 252 1 N LEU A 251 O PHE A 350
SHEET 8 AA4 8 GLN A 282 SER A 284 1 O SER A 284 N LEU A 252
SHEET 1 AA5 2 THR A 371 ILE A 374 0
SHEET 2 AA5 2 ALA A 377 PRO A 380 -1 O ALA A 377 N ILE A 374
SHEET 1 AA6 3 VAL B 41 ARG B 44 0
SHEET 2 AA6 3 VAL B 114 THR B 119 -1 O LYS B 118 N VAL B 43
SHEET 3 AA6 3 PRO B 72 LYS B 76 1 N MET B 73 O LEU B 116
SHEET 1 AA7 2 SER B 131 ASN B 132 0
SHEET 2 AA7 2 GLY B 136 ARG B 137 -1 O GLY B 136 N ASN B 132
SHEET 1 AA8 8 LEU B 166 ASP B 171 0
SHEET 2 AA8 8 VAL B 214 ALA B 219 -1 O MET B 218 N GLU B 167
SHEET 3 AA8 8 TRP B 186 LYS B 189 -1 N LEU B 188 O PRO B 217
SHEET 4 AA8 8 ALA B 398 THR B 405 -1 O ALA B 398 N LYS B 189
SHEET 5 AA8 8 PRO B 411 ILE B 417 -1 O LEU B 414 N MET B 401
SHEET 6 AA8 8 ALA B 348 PRO B 352 -1 N CYS B 351 O GLN B 415
SHEET 7 AA8 8 ARG B 249 LEU B 252 1 N LEU B 251 O ALA B 348
SHEET 8 AA8 8 GLN B 282 SER B 284 1 O SER B 284 N LEU B 252
SHEET 1 AA9 2 THR B 371 THR B 373 0
SHEET 2 AA9 2 ASP B 378 PRO B 380 -1 O THR B 379 N LEU B 372
CISPEP 1 GLY A 150 SER A 151 0 5.42
CISPEP 2 GLY B 150 SER B 151 0 7.91
CRYST1 90.707 90.707 278.114 90.00 90.00 90.00 P 43 21 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011025 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011025 0.000000 0.00000
SCALE3 0.000000 0.000000 0.003596 0.00000