HEADER MEMBRANE PROTEIN 05-JUL-24 9FZD TITLE STRUCTURE OF OMPA-LONG IN COMPLEX WITH NANOBODY NB39 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OUTER MEMBRANE PORIN A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NANOBODY 39; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: NB39; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: OMPA, C1093; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MC1061; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: MC1061 KEYWDS PORIN, NANOBODY, COMPLEX, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.ACKLE,M.SORGENFREI,M.A.SEEGER REVDAT 1 17-JUL-24 9FZD 0 JRNL AUTH M.SORGENFREI,L.M.HURLIMANN,A.PRINTZ,F.WEGNER,D.MORGER, JRNL AUTH 2 F.ACKLE,M.M.REMY,G.MONTOWSKI,H.KESERUE,A.CUENOD,F.IMKAMP, JRNL AUTH 3 A.EGLI,P.M.KELLER,M.A.SEEGER JRNL TITL RAPID DETECTION AND CAPTURE OF CLINICAL ESCHERICHIA COLI JRNL TITL 2 STRAINS MEDIATED BY OMPA-TARGETING NANOBODIES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 16251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8000 - 4.1800 0.99 2715 144 0.2191 0.2296 REMARK 3 2 4.1800 - 3.3200 0.99 2573 135 0.2372 0.2838 REMARK 3 3 3.3200 - 2.9000 1.00 2573 136 0.2924 0.3399 REMARK 3 4 2.9000 - 2.6300 1.00 2538 133 0.3252 0.3536 REMARK 3 5 2.6300 - 2.4400 0.99 2548 135 0.3245 0.3246 REMARK 3 6 2.4400 - 2.3000 1.00 2490 131 0.3809 0.4138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.321 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.258 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2314 REMARK 3 ANGLE : 1.797 3147 REMARK 3 CHIRALITY : 0.100 328 REMARK 3 PLANARITY : 0.013 415 REMARK 3 DIHEDRAL : 14.119 819 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1289 8.3605 65.8781 REMARK 3 T TENSOR REMARK 3 T11: 0.4091 T22: 0.1958 REMARK 3 T33: 0.7309 T12: -0.0011 REMARK 3 T13: -0.0215 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.4937 L22: 0.7190 REMARK 3 L33: 5.7327 L12: -0.1105 REMARK 3 L13: -0.1321 L23: -1.1981 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.2240 S13: -0.1911 REMARK 3 S21: -0.0944 S22: -0.2186 S23: 0.2097 REMARK 3 S31: 0.0881 S32: -0.5237 S33: 0.2218 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6441 3.3948 36.8159 REMARK 3 T TENSOR REMARK 3 T11: 0.6833 T22: 0.8197 REMARK 3 T33: 0.8131 T12: -0.1499 REMARK 3 T13: -0.0995 T23: -0.1156 REMARK 3 L TENSOR REMARK 3 L11: 3.9434 L22: 5.4267 REMARK 3 L33: 3.9079 L12: -0.7685 REMARK 3 L13: -0.7643 L23: 4.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: 0.3000 S13: -1.0726 REMARK 3 S21: 0.2873 S22: -0.5323 S23: 0.9198 REMARK 3 S31: 0.6157 S32: -1.1440 S33: 0.4517 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2148 10.5329 66.5176 REMARK 3 T TENSOR REMARK 3 T11: 0.4643 T22: 0.1412 REMARK 3 T33: 0.7765 T12: -0.0951 REMARK 3 T13: 0.0967 T23: 0.0352 REMARK 3 L TENSOR REMARK 3 L11: 1.9804 L22: 1.2219 REMARK 3 L33: 4.3798 L12: -0.5891 REMARK 3 L13: -0.0885 L23: 0.2399 REMARK 3 S TENSOR REMARK 3 S11: 0.0610 S12: -0.1451 S13: 0.0926 REMARK 3 S21: 0.3193 S22: -0.0849 S23: 0.4099 REMARK 3 S31: 0.2281 S32: -0.1376 S33: 0.0587 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0263 6.9027 48.9952 REMARK 3 T TENSOR REMARK 3 T11: 0.4848 T22: 0.2746 REMARK 3 T33: 0.5829 T12: -0.0245 REMARK 3 T13: -0.0099 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.8956 L22: 1.2968 REMARK 3 L33: 6.9496 L12: -0.3698 REMARK 3 L13: 0.0014 L23: 0.8433 REMARK 3 S TENSOR REMARK 3 S11: -0.1454 S12: 0.5081 S13: 0.0036 REMARK 3 S21: 0.1745 S22: -0.0039 S23: 0.1842 REMARK 3 S31: 1.0460 S32: 0.4419 S33: 0.2835 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5642 11.4329 57.9840 REMARK 3 T TENSOR REMARK 3 T11: 0.3868 T22: 0.0979 REMARK 3 T33: 0.6688 T12: 0.0088 REMARK 3 T13: -0.0249 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 1.8911 L22: 1.2987 REMARK 3 L33: 3.4703 L12: 0.1224 REMARK 3 L13: -0.9681 L23: -0.3069 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: 0.2151 S13: 0.0271 REMARK 3 S21: 0.0977 S22: -0.1140 S23: 0.2099 REMARK 3 S31: -0.2930 S32: -0.0325 S33: 0.1420 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6060 10.6348 48.6253 REMARK 3 T TENSOR REMARK 3 T11: 0.3400 T22: 0.1917 REMARK 3 T33: 0.7005 T12: -0.0874 REMARK 3 T13: -0.0796 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.5006 L22: 1.8218 REMARK 3 L33: 3.9392 L12: 0.2139 REMARK 3 L13: -0.6195 L23: 0.0760 REMARK 3 S TENSOR REMARK 3 S11: 0.0896 S12: 0.2336 S13: -0.0928 REMARK 3 S21: -0.0393 S22: -0.1453 S23: 0.0628 REMARK 3 S31: -0.5890 S32: 0.1975 S33: 0.0277 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6682 9.0063 59.0323 REMARK 3 T TENSOR REMARK 3 T11: 0.4193 T22: 0.1385 REMARK 3 T33: 0.6614 T12: -0.0015 REMARK 3 T13: -0.0299 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.9672 L22: 1.9848 REMARK 3 L33: 4.9720 L12: 0.1621 REMARK 3 L13: -0.4276 L23: -1.2789 REMARK 3 S TENSOR REMARK 3 S11: 0.1407 S12: 0.2423 S13: -0.3560 REMARK 3 S21: 0.1270 S22: 0.1539 S23: 0.4116 REMARK 3 S31: -0.0913 S32: -0.0873 S33: -0.2891 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5039 3.9935 3.5933 REMARK 3 T TENSOR REMARK 3 T11: 0.6027 T22: 1.5542 REMARK 3 T33: 0.7271 T12: -0.1472 REMARK 3 T13: -0.0361 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.2765 L22: 1.2894 REMARK 3 L33: 2.9898 L12: -0.2223 REMARK 3 L13: -0.3784 L23: 0.0852 REMARK 3 S TENSOR REMARK 3 S11: -0.3126 S12: 0.6258 S13: 0.0642 REMARK 3 S21: -0.1214 S22: -0.2892 S23: -0.5079 REMARK 3 S31: -0.0242 S32: 1.0673 S33: 0.4344 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 21 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3346 7.1950 15.9934 REMARK 3 T TENSOR REMARK 3 T11: 0.7207 T22: 1.2332 REMARK 3 T33: 0.7029 T12: 0.0205 REMARK 3 T13: -0.1664 T23: -0.0845 REMARK 3 L TENSOR REMARK 3 L11: 0.0406 L22: 0.7057 REMARK 3 L33: 2.2548 L12: -0.0708 REMARK 3 L13: 0.3035 L23: -0.5544 REMARK 3 S TENSOR REMARK 3 S11: -0.1548 S12: 0.5029 S13: -0.2693 REMARK 3 S21: 0.0972 S22: 0.5497 S23: 0.0099 REMARK 3 S31: -0.5967 S32: 0.0974 S33: -0.4313 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4359 13.7725 9.3946 REMARK 3 T TENSOR REMARK 3 T11: 0.7559 T22: 1.2583 REMARK 3 T33: 0.6441 T12: -0.1020 REMARK 3 T13: -0.1148 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.2784 L22: 2.6056 REMARK 3 L33: 2.2043 L12: -0.8410 REMARK 3 L13: -0.1362 L23: -0.2358 REMARK 3 S TENSOR REMARK 3 S11: -0.3848 S12: 0.7073 S13: 0.5259 REMARK 3 S21: -0.0179 S22: 0.0805 S23: -0.1650 REMARK 3 S31: -0.5982 S32: 0.0732 S33: 0.4290 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3995 11.6627 8.9304 REMARK 3 T TENSOR REMARK 3 T11: 0.7239 T22: 1.2412 REMARK 3 T33: 0.6427 T12: -0.0948 REMARK 3 T13: -0.0997 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.1503 L22: 0.1870 REMARK 3 L33: 4.6482 L12: 0.0047 REMARK 3 L13: -0.2530 L23: 0.2212 REMARK 3 S TENSOR REMARK 3 S11: 0.1002 S12: 0.3550 S13: 0.6406 REMARK 3 S21: 0.3741 S22: 0.1308 S23: 0.1310 REMARK 3 S31: -0.9872 S32: 0.4989 S33: 0.0495 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8704 8.4544 13.2691 REMARK 3 T TENSOR REMARK 3 T11: 0.6757 T22: 1.3307 REMARK 3 T33: 0.6807 T12: -0.1240 REMARK 3 T13: -0.0559 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.0363 L22: 0.3402 REMARK 3 L33: 1.5628 L12: 0.0782 REMARK 3 L13: -0.0347 L23: 0.4452 REMARK 3 S TENSOR REMARK 3 S11: -0.1174 S12: 0.5730 S13: 0.2372 REMARK 3 S21: -0.3345 S22: 0.1415 S23: -0.1179 REMARK 3 S31: -0.6384 S32: 0.9606 S33: -0.2308 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9FZD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1292139993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16264 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 44.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.07108 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : 0.89800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CHLORIDE, 0.1 M SODIUM REMARK 280 CITRATE, 12 % PEG 4K, 0.1 M LISO4, PH 5.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.19900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.28600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 128.37300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.19900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.28600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 128.37300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.19900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.28600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 128.37300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.19900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 26.28600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 128.37300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 92 OD2 ASP A 92 2555 1.65 REMARK 500 OD1 ASP A 92 OH TYR A 135 2555 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 144 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 25 -67.81 -155.62 REMARK 500 THR A 158 -89.65 -102.95 REMARK 500 ILE B 31 157.72 -49.93 REMARK 500 PHE B 32 -11.91 69.90 REMARK 500 SER B 44 103.15 -57.23 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9FZD A 3 176 UNP A0A0H2V5V4_ECOL6 DBREF2 9FZD A A0A0H2V5V4 51 224 DBREF 9FZD B 1 122 PDB 9FZD 9FZD 1 122 SEQADV 9FZD MET A 1 UNP A0A0H2V5V INITIATING METHIONINE SEQADV 9FZD SER A 2 UNP A0A0H2V5V EXPRESSION TAG SEQADV 9FZD ALA A 177 UNP A0A0H2V5V EXPRESSION TAG SEQRES 1 A 177 MET SER ALA PRO LYS ASP ASN THR TRP TYR THR GLY ALA SEQRES 2 A 177 LYS LEU GLY TRP SER GLN TYR HIS ASP THR GLY PHE ILE SEQRES 3 A 177 PRO ASN ASN GLY PRO THR HIS GLU ASN GLN LEU GLY ALA SEQRES 4 A 177 GLY ALA PHE GLY GLY TYR GLN VAL ASN PRO TYR VAL GLY SEQRES 5 A 177 PHE GLU MET GLY TYR ASP TRP LEU GLY ARG MET PRO TYR SEQRES 6 A 177 LYS GLY ASP ASN ILE ASN GLY ALA TYR LYS ALA GLN GLY SEQRES 7 A 177 VAL GLN LEU THR ALA LYS LEU GLY TYR PRO ILE THR ASP SEQRES 8 A 177 ASP LEU ASP ILE TYR THR ARG LEU GLY GLY MET VAL TRP SEQRES 9 A 177 ARG ALA ASP THR LYS ALA ASN VAL PRO GLY GLY ALA SER SEQRES 10 A 177 PHE LYS ASP HIS ASP THR GLY VAL SER PRO VAL PHE ALA SEQRES 11 A 177 GLY GLY VAL GLU TYR ALA ILE THR PRO GLU ILE ALA THR SEQRES 12 A 177 ARG LEU GLU TYR GLN TRP THR ASN ASN ILE GLY ASP ALA SEQRES 13 A 177 HIS THR ILE GLY THR ARG PRO ASP ASN GLY MET LEU SER SEQRES 14 A 177 LEU GLY VAL SER TYR ARG PHE ALA SEQRES 1 B 122 GLY PRO SER GLN ARG GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 B 122 LEU VAL HIS THR GLY GLY SER LEU LYS LEU SER CYS VAL SEQRES 3 B 122 PRO ASN GLY SER ILE PHE ASN PHE ASN PRO MET GLY TRP SEQRES 4 B 122 TYR ARG GLN VAL SER GLY GLN GLN ARG GLU LEU VAL ALA SEQRES 5 B 122 THR LEU THR ARG ASP GLY VAL GLU ASN TYR ALA SER SER SEQRES 6 B 122 VAL LYS GLY ARG PHE THR ILE SER ARG ASP SER ALA LYS SEQRES 7 B 122 ASN THR LEU TYR LEU GLN MET THR ASP VAL LYS PRO GLY SEQRES 8 B 122 ASP ALA ALA VAL TYR ILE CYS HIS ALA ASN TYR ARG ILE SEQRES 9 B 122 GLY ARG ASN ASP LEU PRO VAL TRP GLY LYS GLY THR PRO SEQRES 10 B 122 VAL THR VAL SER ALA FORMUL 3 HOH *16(H2 O) HELIX 1 AA1 LYS B 89 ALA B 93 5 5 SHEET 1 AA1 9 THR A 8 HIS A 21 0 SHEET 2 AA1 9 ASN A 35 GLN A 46 -1 O GLN A 36 N SER A 18 SHEET 3 AA1 9 VAL A 51 TYR A 65 -1 O TRP A 59 N ALA A 39 SHEET 4 AA1 9 ASN A 71 TYR A 87 -1 O LYS A 84 N GLY A 52 SHEET 5 AA1 9 LEU A 93 ASN A 111 -1 O ILE A 95 N TYR A 87 SHEET 6 AA1 9 SER A 117 ALA A 136 -1 O GLU A 134 N ASP A 94 SHEET 7 AA1 9 ILE A 141 THR A 150 -1 O TRP A 149 N PHE A 129 SHEET 8 AA1 9 ASP A 164 PHE A 176 -1 O SER A 169 N GLU A 146 SHEET 9 AA1 9 THR A 8 HIS A 21 -1 N GLN A 19 O GLY A 166 SHEET 1 AA2 4 LEU B 7 SER B 10 0 SHEET 2 AA2 4 LEU B 21 PRO B 27 -1 O SER B 24 N SER B 10 SHEET 3 AA2 4 THR B 80 MET B 85 -1 O MET B 85 N LEU B 21 SHEET 4 AA2 4 PHE B 70 ASP B 75 -1 N SER B 73 O TYR B 82 SHEET 1 AA3 6 GLY B 13 HIS B 16 0 SHEET 2 AA3 6 THR B 116 SER B 121 1 O PRO B 117 N GLY B 13 SHEET 3 AA3 6 ALA B 94 ILE B 104 -1 N TYR B 96 O THR B 116 SHEET 4 AA3 6 MET B 37 GLN B 42 -1 N TYR B 40 O ILE B 97 SHEET 5 AA3 6 GLU B 49 LEU B 54 -1 O GLU B 49 N ARG B 41 SHEET 6 AA3 6 GLU B 60 TYR B 62 -1 O ASN B 61 N THR B 53 SHEET 1 AA4 4 GLY B 13 HIS B 16 0 SHEET 2 AA4 4 THR B 116 SER B 121 1 O PRO B 117 N GLY B 13 SHEET 3 AA4 4 ALA B 94 ILE B 104 -1 N TYR B 96 O THR B 116 SHEET 4 AA4 4 ASN B 107 TRP B 112 -1 O ASN B 107 N ILE B 104 SSBOND 1 CYS B 25 CYS B 98 1555 1555 2.85 CISPEP 1 ASN B 35 PRO B 36 0 -15.92 CRYST1 52.398 52.572 256.746 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019085 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019022 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003895 0.00000