HEADER TOXIN 15-JUL-24 9G48 TITLE STAPHYLOCOCCUS AUREUS MAZF IN COMPLEX WITH NANOBODY 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDORIBONUCLEASE MAZF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SAMAZF,TOXIN MAZF,MRNA INTERFERASE MAZF; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NANOBODY 6; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MAZF, SA1873; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 9 ORGANISM_TAXID: 9844; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TOXIN-ANTITOXIN SYSTEM, RIBONUCLEASE, NANOBODY, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR V.ZORZINI,S.HAESAERTS,R.LORIS REVDAT 2 09-OCT-24 9G48 1 REMARK REVDAT 1 24-JUL-24 9G48 0 JRNL AUTH M.PROLIC-KALINSEK,V.ZORZINI,S.HAESAERTS,P.DE BRUYN,R.LORIS JRNL TITL NANOBODY-MEDIATED ACTIVATION AND INHIBITION OF JRNL TITL 2 STAPHYLOCOCCUS AUREUS MAZF JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.338 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 28443 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.007 REMARK 3 FREE R VALUE TEST SET COUNT : 1424 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7613 - 4.6159 0.89 2695 143 0.2292 0.2424 REMARK 3 2 4.6159 - 3.6646 0.95 2720 143 0.1698 0.1946 REMARK 3 3 3.6646 - 3.2016 0.95 2666 140 0.1916 0.2504 REMARK 3 4 3.2016 - 2.9090 0.97 2716 143 0.2080 0.2296 REMARK 3 5 2.9090 - 2.7005 0.99 2729 144 0.2275 0.2547 REMARK 3 6 2.7005 - 2.5414 0.99 2760 145 0.2399 0.3158 REMARK 3 7 2.5414 - 2.4141 0.99 2700 142 0.2638 0.2793 REMARK 3 8 2.4141 - 2.3090 0.98 2683 141 0.2805 0.3107 REMARK 3 9 2.3090 - 2.2201 0.98 2704 143 0.3043 0.3318 REMARK 3 10 2.2201 - 2.1435 0.96 2646 140 0.3365 0.3840 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.333 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.891 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3756 REMARK 3 ANGLE : 0.540 5089 REMARK 3 CHIRALITY : 0.045 580 REMARK 3 PLANARITY : 0.004 656 REMARK 3 DIHEDRAL : 11.333 2242 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5230 0.4627 20.5282 REMARK 3 T TENSOR REMARK 3 T11: 0.5308 T22: 0.6440 REMARK 3 T33: 0.7910 T12: -0.2244 REMARK 3 T13: 0.1780 T23: -0.0752 REMARK 3 L TENSOR REMARK 3 L11: 3.1057 L22: 0.6297 REMARK 3 L33: 4.9393 L12: 1.3792 REMARK 3 L13: 3.9157 L23: 1.5210 REMARK 3 S TENSOR REMARK 3 S11: -0.3592 S12: -0.2855 S13: -0.2072 REMARK 3 S21: 0.5073 S22: -0.2577 S23: 1.5232 REMARK 3 S31: 0.9029 S32: -1.2057 S33: 0.0571 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8761 3.5772 11.9092 REMARK 3 T TENSOR REMARK 3 T11: 0.5815 T22: 0.4437 REMARK 3 T33: 0.5451 T12: -0.0515 REMARK 3 T13: 0.1387 T23: -0.1210 REMARK 3 L TENSOR REMARK 3 L11: 6.3928 L22: 6.1541 REMARK 3 L33: 8.4546 L12: -0.2079 REMARK 3 L13: -0.4104 L23: -0.9502 REMARK 3 S TENSOR REMARK 3 S11: 0.0902 S12: 0.0981 S13: -0.3716 REMARK 3 S21: 1.1536 S22: -0.4365 S23: 0.5682 REMARK 3 S31: -0.6552 S32: -0.4640 S33: 0.2782 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8906 17.6823 7.0197 REMARK 3 T TENSOR REMARK 3 T11: 1.0917 T22: 0.8752 REMARK 3 T33: 0.9146 T12: -0.1715 REMARK 3 T13: 0.1977 T23: 0.0540 REMARK 3 L TENSOR REMARK 3 L11: 3.5375 L22: 3.6852 REMARK 3 L33: 3.0988 L12: 0.6835 REMARK 3 L13: 2.9387 L23: 2.2757 REMARK 3 S TENSOR REMARK 3 S11: -0.7737 S12: 0.4551 S13: -0.8866 REMARK 3 S21: 1.4456 S22: -0.0809 S23: 0.7507 REMARK 3 S31: 0.0930 S32: 0.9550 S33: 0.5177 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7720 7.3686 16.1227 REMARK 3 T TENSOR REMARK 3 T11: 0.5133 T22: 0.4248 REMARK 3 T33: 0.4018 T12: -0.0721 REMARK 3 T13: 0.0862 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.8306 L22: 2.0357 REMARK 3 L33: 2.3433 L12: -1.9647 REMARK 3 L13: 0.9737 L23: 0.6935 REMARK 3 S TENSOR REMARK 3 S11: 0.1207 S12: 0.0751 S13: -0.6640 REMARK 3 S21: -0.4711 S22: -0.3850 S23: -0.1204 REMARK 3 S31: -0.7141 S32: 0.4894 S33: 0.2062 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7398 8.9877 17.8294 REMARK 3 T TENSOR REMARK 3 T11: 0.4414 T22: 0.3276 REMARK 3 T33: 0.2868 T12: -0.0986 REMARK 3 T13: 0.0020 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.7067 L22: 2.7727 REMARK 3 L33: 2.9445 L12: -0.7891 REMARK 3 L13: -0.6379 L23: 1.2496 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: 0.1267 S13: -0.1599 REMARK 3 S21: -0.2065 S22: 0.0502 S23: -0.0564 REMARK 3 S31: -0.0952 S32: 0.0058 S33: 0.0095 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0499 1.1079 14.2232 REMARK 3 T TENSOR REMARK 3 T11: 0.6463 T22: 0.4484 REMARK 3 T33: 0.6369 T12: -0.1168 REMARK 3 T13: -0.0781 T23: 0.0746 REMARK 3 L TENSOR REMARK 3 L11: 0.3210 L22: 0.3472 REMARK 3 L33: 1.4729 L12: -0.2049 REMARK 3 L13: 0.6155 L23: -0.3279 REMARK 3 S TENSOR REMARK 3 S11: 0.1029 S12: -0.2022 S13: -0.1254 REMARK 3 S21: -0.9014 S22: 0.2642 S23: 1.0401 REMARK 3 S31: 0.3249 S32: 0.2711 S33: -0.1496 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9098 8.7952 12.9404 REMARK 3 T TENSOR REMARK 3 T11: 0.4739 T22: 0.4607 REMARK 3 T33: 0.3489 T12: -0.1260 REMARK 3 T13: 0.0693 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.5003 L22: 0.9425 REMARK 3 L33: 1.4185 L12: -0.2688 REMARK 3 L13: -1.8661 L23: 1.9886 REMARK 3 S TENSOR REMARK 3 S11: -0.2727 S12: 0.6277 S13: 0.3819 REMARK 3 S21: -0.2995 S22: 0.3883 S23: -0.2666 REMARK 3 S31: 0.1015 S32: -0.1370 S33: -0.0995 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4228 -1.3821 14.5018 REMARK 3 T TENSOR REMARK 3 T11: 0.6178 T22: 0.4463 REMARK 3 T33: 0.5769 T12: -0.2103 REMARK 3 T13: 0.0521 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 3.2239 L22: 4.6663 REMARK 3 L33: 3.0828 L12: -1.5995 REMARK 3 L13: -0.2881 L23: -0.3103 REMARK 3 S TENSOR REMARK 3 S11: -0.0700 S12: 0.0601 S13: 0.0867 REMARK 3 S21: -0.5242 S22: -0.4221 S23: -0.1924 REMARK 3 S31: 0.9527 S32: -0.7012 S33: 0.5338 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5896 6.9815 25.5506 REMARK 3 T TENSOR REMARK 3 T11: 0.4553 T22: 0.5003 REMARK 3 T33: 0.4223 T12: -0.1265 REMARK 3 T13: 0.0126 T23: 0.0518 REMARK 3 L TENSOR REMARK 3 L11: 3.1992 L22: 2.6028 REMARK 3 L33: 2.1164 L12: -0.4792 REMARK 3 L13: 1.1734 L23: 2.0015 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: -0.6085 S13: 0.0410 REMARK 3 S21: 0.5860 S22: -0.2089 S23: -1.4729 REMARK 3 S31: 0.2516 S32: 0.2458 S33: -0.0564 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7939 18.3735 30.4676 REMARK 3 T TENSOR REMARK 3 T11: 0.8556 T22: 0.7112 REMARK 3 T33: 0.5647 T12: -0.1791 REMARK 3 T13: -0.0181 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 9.7482 L22: 2.8664 REMARK 3 L33: 2.3548 L12: -2.2425 REMARK 3 L13: -3.4822 L23: 2.4387 REMARK 3 S TENSOR REMARK 3 S11: -0.5440 S12: -1.3442 S13: 0.6196 REMARK 3 S21: 1.3998 S22: -0.7601 S23: -0.9686 REMARK 3 S31: -0.2670 S32: 0.9840 S33: -0.0746 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3586 31.2731 22.6258 REMARK 3 T TENSOR REMARK 3 T11: 0.6504 T22: 0.4645 REMARK 3 T33: 0.4745 T12: -0.0700 REMARK 3 T13: 0.0358 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 5.7608 L22: 2.5561 REMARK 3 L33: 6.1863 L12: -1.7534 REMARK 3 L13: 2.4646 L23: -0.0755 REMARK 3 S TENSOR REMARK 3 S11: -0.3144 S12: -0.0106 S13: 0.5299 REMARK 3 S21: 0.2211 S22: 0.0996 S23: 0.1294 REMARK 3 S31: -1.3716 S32: 0.5149 S33: 0.1349 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5407 23.0397 12.9827 REMARK 3 T TENSOR REMARK 3 T11: 1.2295 T22: 1.1678 REMARK 3 T33: 0.8971 T12: -0.1823 REMARK 3 T13: 0.0081 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 6.7468 L22: 6.9092 REMARK 3 L33: 0.5684 L12: 1.7846 REMARK 3 L13: -1.0973 L23: -1.9062 REMARK 3 S TENSOR REMARK 3 S11: 0.2899 S12: 2.1540 S13: 0.3119 REMARK 3 S21: -1.0586 S22: -0.2743 S23: 0.4512 REMARK 3 S31: 1.3131 S32: -2.8123 S33: -0.3200 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7284 23.8212 23.4742 REMARK 3 T TENSOR REMARK 3 T11: 0.4088 T22: 0.4465 REMARK 3 T33: 0.3665 T12: -0.0490 REMARK 3 T13: 0.0321 T23: 0.0640 REMARK 3 L TENSOR REMARK 3 L11: 3.9786 L22: 1.6615 REMARK 3 L33: 1.0278 L12: -0.0665 REMARK 3 L13: -1.6011 L23: 1.4046 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: 0.0979 S13: 0.2515 REMARK 3 S21: -0.1538 S22: -0.0177 S23: -0.0389 REMARK 3 S31: -0.3260 S32: -0.0314 S33: 0.0490 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9812 31.0954 31.5418 REMARK 3 T TENSOR REMARK 3 T11: 0.6797 T22: 0.4639 REMARK 3 T33: 0.6874 T12: 0.0316 REMARK 3 T13: -0.0186 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 3.5895 L22: 0.9979 REMARK 3 L33: 4.0705 L12: 0.6598 REMARK 3 L13: 2.3725 L23: 1.4371 REMARK 3 S TENSOR REMARK 3 S11: -0.8049 S12: -0.3165 S13: 0.8245 REMARK 3 S21: 0.7466 S22: -0.0094 S23: 0.5847 REMARK 3 S31: -0.6061 S32: 0.1276 S33: 0.4342 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6203 22.6381 19.3710 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.3734 REMARK 3 T33: 0.3842 T12: -0.0788 REMARK 3 T13: 0.0221 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 4.8324 L22: 0.9779 REMARK 3 L33: 2.9442 L12: 0.7030 REMARK 3 L13: -2.1325 L23: 1.0139 REMARK 3 S TENSOR REMARK 3 S11: -0.2587 S12: 0.6997 S13: -0.5718 REMARK 3 S21: -0.5689 S22: -0.1657 S23: 0.0696 REMARK 3 S31: 0.0194 S32: -0.5016 S33: 0.4256 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2261 25.8118 29.9809 REMARK 3 T TENSOR REMARK 3 T11: 0.4355 T22: 0.4155 REMARK 3 T33: 0.4358 T12: -0.0288 REMARK 3 T13: 0.0809 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.3863 L22: 3.0723 REMARK 3 L33: 0.1333 L12: -0.3493 REMARK 3 L13: 1.1010 L23: -0.6932 REMARK 3 S TENSOR REMARK 3 S11: 0.1978 S12: -0.3486 S13: 0.4869 REMARK 3 S21: 0.4863 S22: -0.3289 S23: -0.2259 REMARK 3 S31: -0.2452 S32: 0.0863 S33: 0.1273 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 110 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4614 7.5182 32.1733 REMARK 3 T TENSOR REMARK 3 T11: 0.4604 T22: 0.6719 REMARK 3 T33: 0.5795 T12: -0.0732 REMARK 3 T13: 0.1391 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.1108 L22: 2.1268 REMARK 3 L33: 1.6871 L12: 0.2981 REMARK 3 L13: -0.5293 L23: -1.3036 REMARK 3 S TENSOR REMARK 3 S11: -0.1449 S12: -0.4965 S13: -1.1751 REMARK 3 S21: 0.8434 S22: -0.7467 S23: 0.1564 REMARK 3 S31: 0.4550 S32: 0.9330 S33: 0.7118 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 3 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.0567 31.8059 11.9701 REMARK 3 T TENSOR REMARK 3 T11: 0.4674 T22: 0.4797 REMARK 3 T33: 0.5400 T12: -0.0856 REMARK 3 T13: 0.0601 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.8756 L22: 3.2911 REMARK 3 L33: 2.4273 L12: 1.6788 REMARK 3 L13: 0.2409 L23: 2.2666 REMARK 3 S TENSOR REMARK 3 S11: -0.1237 S12: 0.4698 S13: 0.1539 REMARK 3 S21: -0.5717 S22: 0.3712 S23: -0.4967 REMARK 3 S31: -0.4815 S32: 0.3469 S33: -0.1354 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5038 24.3324 13.0051 REMARK 3 T TENSOR REMARK 3 T11: 0.6781 T22: 0.4974 REMARK 3 T33: 0.5455 T12: -0.1006 REMARK 3 T13: 0.0794 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 3.7238 L22: 3.7356 REMARK 3 L33: 2.0401 L12: 0.4867 REMARK 3 L13: -1.4794 L23: 0.4793 REMARK 3 S TENSOR REMARK 3 S11: -0.0817 S12: -0.2532 S13: -0.0890 REMARK 3 S21: 0.5346 S22: -0.0157 S23: 0.0748 REMARK 3 S31: 0.4312 S32: -0.1553 S33: -0.0338 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 52 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6993 29.4580 6.8631 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.6835 REMARK 3 T33: 0.7054 T12: -0.0383 REMARK 3 T13: 0.0630 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 4.2905 L22: 1.5223 REMARK 3 L33: 2.9014 L12: -0.3588 REMARK 3 L13: -3.4491 L23: -0.2582 REMARK 3 S TENSOR REMARK 3 S11: 0.2687 S12: 0.7833 S13: 1.0750 REMARK 3 S21: 0.1974 S22: -0.4123 S23: 0.9962 REMARK 3 S31: 0.7665 S32: -1.6580 S33: 0.5649 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0372 32.7492 7.7199 REMARK 3 T TENSOR REMARK 3 T11: 0.4559 T22: 0.3603 REMARK 3 T33: 0.4032 T12: -0.0823 REMARK 3 T13: 0.0588 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 3.6693 L22: 7.8427 REMARK 3 L33: 6.2177 L12: 2.7402 REMARK 3 L13: -0.0041 L23: 2.9808 REMARK 3 S TENSOR REMARK 3 S11: -0.2659 S12: 0.2881 S13: 0.4177 REMARK 3 S21: 0.0251 S22: 0.1360 S23: 0.1510 REMARK 3 S31: 0.2901 S32: -0.5262 S33: 0.2545 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 84 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.4044 26.2415 13.4883 REMARK 3 T TENSOR REMARK 3 T11: 0.5300 T22: 0.5361 REMARK 3 T33: 0.4614 T12: -0.0970 REMARK 3 T13: 0.1087 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 2.1697 L22: 1.3245 REMARK 3 L33: 0.7215 L12: 2.5052 REMARK 3 L13: 0.2160 L23: -0.3466 REMARK 3 S TENSOR REMARK 3 S11: 0.2768 S12: 0.0573 S13: 0.0863 REMARK 3 S21: 0.3268 S22: -0.2083 S23: 0.1757 REMARK 3 S31: 0.0094 S32: -0.2588 S33: 0.0631 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 113 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.9890 22.2881 16.3600 REMARK 3 T TENSOR REMARK 3 T11: 0.5592 T22: 0.5260 REMARK 3 T33: 0.5025 T12: -0.0944 REMARK 3 T13: 0.0579 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.8127 L22: 4.9145 REMARK 3 L33: 2.2997 L12: 1.1574 REMARK 3 L13: 0.6735 L23: 0.9100 REMARK 3 S TENSOR REMARK 3 S11: 0.1482 S12: -0.2450 S13: -0.6244 REMARK 3 S21: 0.6609 S22: -0.0080 S23: -0.4908 REMARK 3 S31: 0.3451 S32: 0.1218 S33: 0.1647 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5301 2.0405 39.9438 REMARK 3 T TENSOR REMARK 3 T11: 0.5596 T22: 0.5248 REMARK 3 T33: 0.6125 T12: -0.0610 REMARK 3 T13: 0.1247 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.3434 L22: 1.0975 REMARK 3 L33: 1.1957 L12: 0.8848 REMARK 3 L13: 0.6827 L23: 0.3618 REMARK 3 S TENSOR REMARK 3 S11: -0.1447 S12: 1.2192 S13: 0.4481 REMARK 3 S21: 0.3092 S22: -0.1262 S23: 1.9587 REMARK 3 S31: -0.2067 S32: -1.1105 S33: 0.0399 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 13 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4582 3.8440 33.7314 REMARK 3 T TENSOR REMARK 3 T11: 0.4191 T22: 0.4933 REMARK 3 T33: 0.4990 T12: -0.0897 REMARK 3 T13: -0.0175 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.7058 L22: 0.8409 REMARK 3 L33: 2.1144 L12: -0.1090 REMARK 3 L13: -0.8850 L23: 0.0493 REMARK 3 S TENSOR REMARK 3 S11: -0.2258 S12: 0.2220 S13: 0.1345 REMARK 3 S21: -0.1072 S22: 0.1817 S23: 0.0323 REMARK 3 S31: -0.1789 S32: -0.1250 S33: 0.0672 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 52 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3671 6.4691 21.8522 REMARK 3 T TENSOR REMARK 3 T11: 0.9471 T22: 0.6392 REMARK 3 T33: 0.5674 T12: -0.1899 REMARK 3 T13: -0.1204 T23: 0.1204 REMARK 3 L TENSOR REMARK 3 L11: 0.5844 L22: 2.1440 REMARK 3 L33: 1.9037 L12: 0.0851 REMARK 3 L13: -0.6322 L23: 1.5861 REMARK 3 S TENSOR REMARK 3 S11: -0.2737 S12: 0.6884 S13: 0.5670 REMARK 3 S21: -0.4938 S22: -0.4236 S23: -0.0209 REMARK 3 S31: -1.9149 S32: 0.5760 S33: 0.4030 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 61 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6804 1.3451 27.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.4662 T22: 0.6458 REMARK 3 T33: 0.4767 T12: -0.1055 REMARK 3 T13: 0.0014 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 3.1895 L22: 5.6695 REMARK 3 L33: 2.9536 L12: 0.2030 REMARK 3 L13: -1.6007 L23: 0.9918 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: 0.7261 S13: -0.0047 REMARK 3 S21: -0.6135 S22: -0.1392 S23: 0.2577 REMARK 3 S31: 0.1773 S32: -0.5686 S33: 0.0310 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 84 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0751 7.1593 32.6814 REMARK 3 T TENSOR REMARK 3 T11: 0.4469 T22: 0.4953 REMARK 3 T33: 0.4479 T12: -0.0659 REMARK 3 T13: 0.0184 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.8920 L22: 1.8827 REMARK 3 L33: -0.6522 L12: 2.4121 REMARK 3 L13: -0.4135 L23: -1.2809 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.1333 S13: 0.0129 REMARK 3 S21: -0.1905 S22: -0.0520 S23: 0.2633 REMARK 3 S31: 0.1490 S32: 0.0302 S33: 0.0545 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 125 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9299 -10.8170 42.2755 REMARK 3 T TENSOR REMARK 3 T11: 0.6527 T22: 0.5118 REMARK 3 T33: 0.7630 T12: -0.1009 REMARK 3 T13: 0.0762 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 3.9920 L22: 2.7418 REMARK 3 L33: 2.8447 L12: 1.2346 REMARK 3 L13: 2.0477 L23: -1.3124 REMARK 3 S TENSOR REMARK 3 S11: 0.5769 S12: -0.3009 S13: -2.2145 REMARK 3 S21: 0.5638 S22: -0.7834 S23: 0.2842 REMARK 3 S31: 1.1486 S32: 0.1944 S33: 0.2521 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9G48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1292140293. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28443 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.144 REMARK 200 RESOLUTION RANGE LOW (A) : 39.761 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 2.845 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CDCL2, 0.1 M NA-ACETATE PH 4.6, REMARK 280 30% (W/V) PEG-400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.08000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 164.16000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 164.16000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 82.08000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 338 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 VAL A 115 REMARK 465 ALA A 116 REMARK 465 HIS A 117 REMARK 465 GLN A 118 REMARK 465 LYS A 119 REMARK 465 ASN A 120 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 SER B -2 REMARK 465 GLN B -1 REMARK 465 GLN B 16 REMARK 465 GLY B 17 REMARK 465 HIS B 117 REMARK 465 GLN B 118 REMARK 465 LYS B 119 REMARK 465 ASN B 120 REMARK 465 ALA C 0 REMARK 465 GLN C 1 REMARK 465 VAL C 2 REMARK 465 HIS C 132 REMARK 465 HIS C 133 REMARK 465 HIS C 134 REMARK 465 HIS C 135 REMARK 465 HIS C 136 REMARK 465 HIS C 137 REMARK 465 ALA D 0 REMARK 465 GLN D 1 REMARK 465 VAL D 2 REMARK 465 HIS D 134 REMARK 465 HIS D 135 REMARK 465 HIS D 136 REMARK 465 HIS D 137 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A -2 N CB OG REMARK 470 GLN A -1 CB CG CD OE1 NE2 REMARK 470 ASP A 0 CG OD1 OD2 REMARK 470 SER A 13 OG REMARK 470 GLN A 16 CG CD OE1 NE2 REMARK 470 LYS A 36 CD CE NZ REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 65 CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 70 CE NZ REMARK 470 ARG A 80 NE CZ NH1 NH2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 LYS A 90 CE NZ REMARK 470 ALA A 114 O REMARK 470 ASP B 0 N CB CG OD1 OD2 REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 51 CG OD1 ND2 REMARK 470 LYS B 52 CD CE NZ REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 ASP B 69 OD1 OD2 REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 GLU B 89 CD OE1 OE2 REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 LYS B 100 NZ REMARK 470 VAL B 115 CG1 CG2 REMARK 470 ALA B 116 CA C O CB REMARK 470 GLN C 3 CG CD OE1 NE2 REMARK 470 GLN C 5 CG CD OE1 NE2 REMARK 470 ARG C 19 NE CZ NH1 NH2 REMARK 470 TYR C 31 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 LYS C 65 CD CE NZ REMARK 470 GLU C 82 CG CD OE1 OE2 REMARK 470 LYS C 87 NZ REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 GLN C 123 CG CD OE1 NE2 REMARK 470 SER C 131 C O CB OG REMARK 470 GLN D 5 CG CD OE1 NE2 REMARK 470 SER D 17 OG REMARK 470 ARG D 19 NE CZ NH1 NH2 REMARK 470 ASP D 30 CG OD1 OD2 REMARK 470 TYR D 31 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 43 CG CD CE NZ REMARK 470 ASP D 55 CG OD1 OD2 REMARK 470 SER D 57 OG REMARK 470 LYS D 65 CD CE NZ REMARK 470 ASN D 74 CG OD1 ND2 REMARK 470 GLU D 82 CG CD OE1 OE2 REMARK 470 LYS D 87 NZ REMARK 470 SER D 131 OG REMARK 470 HIS D 133 CA C O CB CG ND1 CD2 REMARK 470 HIS D 133 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 65 -31.02 -132.99 REMARK 500 LYS A 88 -83.91 -86.79 REMARK 500 THR A 92 -154.48 -162.11 REMARK 500 VAL B 23 99.53 -58.71 REMARK 500 LYS B 88 -71.65 -93.82 REMARK 500 THR B 92 -166.04 -169.63 REMARK 500 LEU B 112 35.44 -90.59 REMARK 500 VAL B 115 95.54 -168.74 REMARK 500 SER D 57 73.63 -150.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 255 DISTANCE = 6.28 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE1 REMARK 620 2 GLU A 62 OE2 58.5 REMARK 620 3 ASP A 71 OD2 102.6 116.0 REMARK 620 4 HOH A 311 O 132.5 74.1 98.6 REMARK 620 5 HOH A 326 O 105.2 136.6 106.6 108.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 202 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 97 OD1 REMARK 620 2 ASP A 97 OD2 57.0 REMARK 620 3 HOH A 327 O 112.6 93.6 REMARK 620 4 HOH A 331 O 100.5 97.8 145.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 335 O REMARK 620 2 GLU D 44 OE2 108.0 REMARK 620 3 HOH D 327 O 110.0 114.5 REMARK 620 4 HOH D 329 O 105.7 94.8 122.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 62 OE2 REMARK 620 2 ASP B 71 OD2 90.7 REMARK 620 3 HOH B 318 O 112.6 94.2 REMARK 620 4 HOH B 326 O 120.3 110.9 120.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D 202 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 89 OE1 REMARK 620 2 GLU D 89 OE2 56.9 REMARK 620 N 1 DBREF 9G48 A 2 120 UNP Q7A4G9 MAZF_STAAN 2 120 DBREF 9G48 B 2 120 UNP Q7A4G9 MAZF_STAAN 2 120 DBREF 9G48 C 0 137 PDB 9G48 9G48 0 137 DBREF 9G48 D 0 137 PDB 9G48 9G48 0 137 SEQADV 9G48 MET A -12 UNP Q7A4G9 INITIATING METHIONINE SEQADV 9G48 GLY A -11 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER A -10 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER A -9 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -8 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -7 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -6 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -5 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -4 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS A -3 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER A -2 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 GLN A -1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 ASP A 0 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 PRO A 1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 MET B -12 UNP Q7A4G9 INITIATING METHIONINE SEQADV 9G48 GLY B -11 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER B -10 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER B -9 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -8 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -7 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -6 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -5 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -4 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 HIS B -3 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 SER B -2 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 GLN B -1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 ASP B 0 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G48 PRO B 1 UNP Q7A4G9 EXPRESSION TAG SEQRES 1 A 133 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 133 PRO ILE ARG ARG GLY ASP VAL TYR LEU ALA ASP LEU SER SEQRES 3 A 133 PRO VAL GLN GLY SER GLU GLN GLY GLY VAL ARG PRO VAL SEQRES 4 A 133 VAL ILE ILE GLN ASN ASP THR GLY ASN LYS TYR SER PRO SEQRES 5 A 133 THR VAL ILE VAL ALA ALA ILE THR GLY ARG ILE ASN LYS SEQRES 6 A 133 ALA LYS ILE PRO THR HIS VAL GLU ILE GLU LYS LYS LYS SEQRES 7 A 133 TYR LYS LEU ASP LYS ASP SER VAL ILE LEU LEU GLU GLN SEQRES 8 A 133 ILE ARG THR LEU ASP LYS LYS ARG LEU LYS GLU LYS LEU SEQRES 9 A 133 THR TYR LEU SER ASP ASP LYS MET LYS GLU VAL ASP ASN SEQRES 10 A 133 ALA LEU MET ILE SER LEU GLY LEU ASN ALA VAL ALA HIS SEQRES 11 A 133 GLN LYS ASN SEQRES 1 B 133 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 133 PRO ILE ARG ARG GLY ASP VAL TYR LEU ALA ASP LEU SER SEQRES 3 B 133 PRO VAL GLN GLY SER GLU GLN GLY GLY VAL ARG PRO VAL SEQRES 4 B 133 VAL ILE ILE GLN ASN ASP THR GLY ASN LYS TYR SER PRO SEQRES 5 B 133 THR VAL ILE VAL ALA ALA ILE THR GLY ARG ILE ASN LYS SEQRES 6 B 133 ALA LYS ILE PRO THR HIS VAL GLU ILE GLU LYS LYS LYS SEQRES 7 B 133 TYR LYS LEU ASP LYS ASP SER VAL ILE LEU LEU GLU GLN SEQRES 8 B 133 ILE ARG THR LEU ASP LYS LYS ARG LEU LYS GLU LYS LEU SEQRES 9 B 133 THR TYR LEU SER ASP ASP LYS MET LYS GLU VAL ASP ASN SEQRES 10 B 133 ALA LEU MET ILE SER LEU GLY LEU ASN ALA VAL ALA HIS SEQRES 11 B 133 GLN LYS ASN SEQRES 1 C 138 ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 C 138 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 C 138 GLY PHE THR LEU ASP TYR TYR ALA ILE GLY TRP PHE ARG SEQRES 4 C 138 GLN ALA PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE SEQRES 5 C 138 SER SER SER ASP GLY SER THR TYR TYR ALA ASP SER VAL SEQRES 6 C 138 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 C 138 THR VAL TYR LEU GLU MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 C 138 THR ALA VAL TYR TYR CYS ALA ALA GLU ALA PRO PRO LEU SEQRES 9 C 138 LEU TYR ASP SER GLY SER TYR TYR CYS GLN PRO LEU TYR SEQRES 10 C 138 GLN TYR ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SEQRES 11 C 138 SER SER HIS HIS HIS HIS HIS HIS SEQRES 1 D 138 ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 D 138 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 D 138 GLY PHE THR LEU ASP TYR TYR ALA ILE GLY TRP PHE ARG SEQRES 4 D 138 GLN ALA PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE SEQRES 5 D 138 SER SER SER ASP GLY SER THR TYR TYR ALA ASP SER VAL SEQRES 6 D 138 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 D 138 THR VAL TYR LEU GLU MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 D 138 THR ALA VAL TYR TYR CYS ALA ALA GLU ALA PRO PRO LEU SEQRES 9 D 138 LEU TYR ASP SER GLY SER TYR TYR CYS GLN PRO LEU TYR SEQRES 10 D 138 GLN TYR ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SEQRES 11 D 138 SER SER HIS HIS HIS HIS HIS HIS HET CD A 201 1 HET CD A 202 1 HET PGE A 203 9 HET CD B 201 1 HET CD D 201 1 HET CD D 202 1 HET PG0 D 203 8 HETNAM CD CADMIUM ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL HETSYN PG0 PEG 6000 FORMUL 5 CD 5(CD 2+) FORMUL 7 PGE C6 H14 O4 FORMUL 11 PG0 C5 H12 O3 FORMUL 12 HOH *181(H2 O) HELIX 1 AA1 ASN A 31 SER A 38 1 8 HELIX 2 AA2 GLU A 62 LYS A 67 1 6 HELIX 3 AA3 SER A 95 LEU A 110 1 16 HELIX 4 AA4 ASN B 31 SER B 38 1 8 HELIX 5 AA5 SER B 95 LEU B 110 1 16 HELIX 6 AA6 ASN C 74 LYS C 76 5 3 HELIX 7 AA7 LYS C 87 THR C 91 5 5 HELIX 8 AA8 SER C 107 CYS C 112 1 6 HELIX 9 AA9 THR D 28 TYR D 32 5 5 HELIX 10 AB1 LYS D 87 THR D 91 5 5 HELIX 11 AB2 GLY D 108 GLN D 113 5 6 SHEET 1 AA1 6 HIS A 58 ILE A 61 0 SHEET 2 AA1 6 SER A 72 ASP A 83 -1 O ILE A 74 N VAL A 59 SHEET 3 AA1 6 THR A 40 THR A 47 -1 N ALA A 45 O LEU A 75 SHEET 4 AA1 6 VAL A 23 ILE A 28 -1 N VAL A 27 O ALA A 44 SHEET 5 AA1 6 ASP A 6 ASP A 11 -1 N TYR A 8 O VAL A 26 SHEET 6 AA1 6 LEU A 87 TYR A 93 -1 O GLU A 89 N LEU A 9 SHEET 1 AA2 6 HIS B 58 ILE B 61 0 SHEET 2 AA2 6 SER B 72 ASP B 83 -1 O ILE B 74 N VAL B 59 SHEET 3 AA2 6 THR B 40 THR B 47 -1 N VAL B 41 O LEU B 82 SHEET 4 AA2 6 ARG B 24 ILE B 28 -1 N VAL B 27 O ALA B 44 SHEET 5 AA2 6 ASP B 6 ALA B 10 -1 N TYR B 8 O VAL B 26 SHEET 6 AA2 6 LEU B 87 TYR B 93 -1 O THR B 92 N VAL B 7 SHEET 1 AA3 4 LEU C 4 SER C 7 0 SHEET 2 AA3 4 LEU C 18 ALA C 24 -1 O SER C 21 N SER C 7 SHEET 3 AA3 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA3 4 PHE C 68 ASP C 73 -1 N ASP C 73 O THR C 78 SHEET 1 AA4 6 GLY C 10 VAL C 12 0 SHEET 2 AA4 6 THR C 125 VAL C 129 1 O THR C 128 N VAL C 12 SHEET 3 AA4 6 ALA C 92 GLU C 99 -1 N TYR C 94 O THR C 125 SHEET 4 AA4 6 ALA C 33 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AA4 6 ARG C 45 ILE C 51 -1 O SER C 49 N TRP C 36 SHEET 6 AA4 6 THR C 58 TYR C 60 -1 O TYR C 59 N CYS C 50 SHEET 1 AA5 4 GLY C 10 VAL C 12 0 SHEET 2 AA5 4 THR C 125 VAL C 129 1 O THR C 128 N VAL C 12 SHEET 3 AA5 4 ALA C 92 GLU C 99 -1 N TYR C 94 O THR C 125 SHEET 4 AA5 4 TYR C 120 TRP C 121 -1 O TYR C 120 N ALA C 98 SHEET 1 AA6 4 LEU D 4 SER D 7 0 SHEET 2 AA6 4 LEU D 18 ALA D 24 -1 O ALA D 23 N GLN D 5 SHEET 3 AA6 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AA6 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLU D 82 SHEET 1 AA7 6 GLY D 10 VAL D 12 0 SHEET 2 AA7 6 THR D 125 VAL D 129 1 O THR D 128 N VAL D 12 SHEET 3 AA7 6 ALA D 92 GLU D 99 -1 N TYR D 94 O THR D 125 SHEET 4 AA7 6 ALA D 33 GLN D 39 -1 N PHE D 37 O TYR D 95 SHEET 5 AA7 6 GLU D 46 ILE D 51 -1 O ILE D 51 N ILE D 34 SHEET 6 AA7 6 THR D 58 TYR D 60 -1 O TYR D 59 N CYS D 50 SHEET 1 AA8 4 GLY D 10 VAL D 12 0 SHEET 2 AA8 4 THR D 125 VAL D 129 1 O THR D 128 N VAL D 12 SHEET 3 AA8 4 ALA D 92 GLU D 99 -1 N TYR D 94 O THR D 125 SHEET 4 AA8 4 TYR D 120 TRP D 121 -1 O TYR D 120 N ALA D 98 SSBOND 1 CYS C 22 CYS C 96 1555 1555 2.03 SSBOND 2 CYS C 50 CYS C 112 1555 1555 2.03 SSBOND 3 CYS D 22 CYS D 96 1555 1555 2.04 SSBOND 4 CYS D 50 CYS D 112 1555 1555 2.03 LINK OE1 GLU A 62 CD CD A 201 1555 1555 2.22 LINK OE2 GLU A 62 CD CD A 201 1555 1555 2.26 LINK OD2 ASP A 71 CD CD A 201 1555 1555 2.26 LINK OD1 ASP A 97 CD CD A 202 1555 1555 2.30 LINK OD2 ASP A 97 CD CD A 202 1555 1555 2.30 LINK CD CD A 201 O HOH A 311 1555 1555 2.32 LINK CD CD A 201 O HOH A 326 1555 1555 2.35 LINK CD CD A 202 O HOH A 327 1555 1555 2.29 LINK CD CD A 202 O HOH A 331 1555 1555 2.30 LINK O HOH A 335 CD CD D 201 1555 1555 2.31 LINK OE2 GLU B 62 CD CD B 201 1555 1555 2.22 LINK OD2 ASP B 71 CD CD B 201 1555 1555 2.27 LINK CD CD B 201 O HOH B 318 1555 1555 2.31 LINK CD CD B 201 O HOH B 326 1555 1555 2.31 LINK OE2 GLU D 44 CD CD D 201 1555 1555 2.32 LINK OE1 GLU D 89 CD CD D 202 1555 1555 2.31 LINK OE2 GLU D 89 CD CD D 202 1555 1555 2.30 LINK CD CD D 201 O HOH D 327 1555 1555 2.32 LINK CD CD D 201 O HOH D 329 1555 1555 2.31 CISPEP 1 SER A 13 PRO A 14 0 -2.21 CISPEP 2 SER B 13 PRO B 14 0 -1.42 CISPEP 3 PRO C 101 PRO C 102 0 1.45 CISPEP 4 PRO D 101 PRO D 102 0 1.07 CRYST1 60.140 60.140 246.240 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016628 0.009600 0.000000 0.00000 SCALE2 0.000000 0.019200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004061 0.00000