data_9GH6 # _entry.id 9GH6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9GH6 pdb_00009gh6 10.2210/pdb9gh6/pdb WWPDB D_1292140995 ? ? EMDB EMD-51348 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-02 ? 2 'EM metadata' 1 0 2025-04-02 ? 3 'Additional map' 1 0 2025-04-02 1 4 FSC 1 0 2025-04-02 ? 5 'Half map' 1 0 2025-04-02 1 6 'Half map' 1 0 2025-04-02 2 7 Image 1 0 2025-04-02 ? 8 Mask 1 0 2025-04-02 1 9 'Primary map' 1 0 2025-04-02 ? 10 'Structure model' 1 1 2025-04-16 ? 11 'Structure model' 1 2 2025-04-23 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 10 'Structure model' 'Data collection' 2 10 'Structure model' 'Database references' 3 11 'Structure model' 'Data collection' 4 11 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 10 'Structure model' citation 2 10 'Structure model' citation_author 3 10 'Structure model' em_admin 4 11 'Structure model' citation 5 11 'Structure model' citation_author 6 11 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 10 'Structure model' '_citation.country' 2 10 'Structure model' '_citation.journal_abbrev' 3 10 'Structure model' '_citation.journal_id_ASTM' 4 10 'Structure model' '_citation.journal_id_CSD' 5 10 'Structure model' '_citation.journal_id_ISSN' 6 10 'Structure model' '_citation.pdbx_database_id_DOI' 7 10 'Structure model' '_citation.year' 8 10 'Structure model' '_em_admin.last_update' 9 11 'Structure model' '_citation.journal_volume' 10 11 'Structure model' '_citation.page_first' 11 11 'Structure model' '_citation.page_last' 12 11 'Structure model' '_citation.pdbx_database_id_PubMed' 13 11 'Structure model' '_citation.title' 14 11 'Structure model' '_citation_author.identifier_ORCID' 15 11 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9GH6 _pdbx_database_status.recvd_initial_deposition_date 2024-08-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'The full map of CbpF/CEACAM1 complex' EMD-51347 'consensus EM volume' EMDB 'CbpF only' EMD-51346 'other EM volume' EMDB 'CEACAM1 (35-234), focused refinement in the complex with CbpF' EMD-51348 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email roderer@fmp-berlin.de _pdbx_contact_author.name_first Daniel _pdbx_contact_author.name_last Roderer _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7276-3467 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Marongiu, G.L.' 1 ? 'Fink, U.' 2 ? 'Roderer, D.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 122 _citation.language ? _citation.page_first e2418155122 _citation.page_last e2418155122 _citation.title 'Structural basis for immune cell binding of Fusobacterium nucleatum via the trimeric autotransporter adhesin CbpF.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2418155122 _citation.pdbx_database_id_PubMed 40198705 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marongiu, G.L.' 1 ? primary 'Fink, U.' 2 ? primary 'Schopf, F.' 3 0000-0003-1929-6246 primary 'Oder, A.' 4 ? primary 'von Kries, J.P.' 5 ? primary 'Roderer, D.' 6 0000-0002-7276-3467 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Carcinoembryonic antigen-related cell adhesion molecule 1' 47922.082 1 ? ? ? 'human CEACAM1 extracellular domain (Acro Biosystems), res. 35-234 are resolved' 2 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Biliary glycoprotein 1,BGP-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIV GYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDK DAVAFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTE LSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFN PISKNQSDPIMLNVNYNALPQENGLSPGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIV GYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDK DAVAFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTE LSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFN PISKNQSDPIMLNVNYNALPQENGLSPGHHHHHH ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 LEU n 1 5 SER n 1 6 ALA n 1 7 PRO n 1 8 LEU n 1 9 HIS n 1 10 ARG n 1 11 VAL n 1 12 ARG n 1 13 VAL n 1 14 PRO n 1 15 TRP n 1 16 GLN n 1 17 GLY n 1 18 LEU n 1 19 LEU n 1 20 LEU n 1 21 THR n 1 22 ALA n 1 23 SER n 1 24 LEU n 1 25 LEU n 1 26 THR n 1 27 PHE n 1 28 TRP n 1 29 ASN n 1 30 PRO n 1 31 PRO n 1 32 THR n 1 33 THR n 1 34 ALA n 1 35 GLN n 1 36 LEU n 1 37 THR n 1 38 THR n 1 39 GLU n 1 40 SER n 1 41 MET n 1 42 PRO n 1 43 PHE n 1 44 ASN n 1 45 VAL n 1 46 ALA n 1 47 GLU n 1 48 GLY n 1 49 LYS n 1 50 GLU n 1 51 VAL n 1 52 LEU n 1 53 LEU n 1 54 LEU n 1 55 VAL n 1 56 HIS n 1 57 ASN n 1 58 LEU n 1 59 PRO n 1 60 GLN n 1 61 GLN n 1 62 LEU n 1 63 PHE n 1 64 GLY n 1 65 TYR n 1 66 SER n 1 67 TRP n 1 68 TYR n 1 69 LYS n 1 70 GLY n 1 71 GLU n 1 72 ARG n 1 73 VAL n 1 74 ASP n 1 75 GLY n 1 76 ASN n 1 77 ARG n 1 78 GLN n 1 79 ILE n 1 80 VAL n 1 81 GLY n 1 82 TYR n 1 83 ALA n 1 84 ILE n 1 85 GLY n 1 86 THR n 1 87 GLN n 1 88 GLN n 1 89 ALA n 1 90 THR n 1 91 PRO n 1 92 GLY n 1 93 PRO n 1 94 ALA n 1 95 ASN n 1 96 SER n 1 97 GLY n 1 98 ARG n 1 99 GLU n 1 100 THR n 1 101 ILE n 1 102 TYR n 1 103 PRO n 1 104 ASN n 1 105 ALA n 1 106 SER n 1 107 LEU n 1 108 LEU n 1 109 ILE n 1 110 GLN n 1 111 ASN n 1 112 VAL n 1 113 THR n 1 114 GLN n 1 115 ASN n 1 116 ASP n 1 117 THR n 1 118 GLY n 1 119 PHE n 1 120 TYR n 1 121 THR n 1 122 LEU n 1 123 GLN n 1 124 VAL n 1 125 ILE n 1 126 LYS n 1 127 SER n 1 128 ASP n 1 129 LEU n 1 130 VAL n 1 131 ASN n 1 132 GLU n 1 133 GLU n 1 134 ALA n 1 135 THR n 1 136 GLY n 1 137 GLN n 1 138 PHE n 1 139 HIS n 1 140 VAL n 1 141 TYR n 1 142 PRO n 1 143 GLU n 1 144 LEU n 1 145 PRO n 1 146 LYS n 1 147 PRO n 1 148 SER n 1 149 ILE n 1 150 SER n 1 151 SER n 1 152 ASN n 1 153 ASN n 1 154 SER n 1 155 ASN n 1 156 PRO n 1 157 VAL n 1 158 GLU n 1 159 ASP n 1 160 LYS n 1 161 ASP n 1 162 ALA n 1 163 VAL n 1 164 ALA n 1 165 PHE n 1 166 THR n 1 167 CYS n 1 168 GLU n 1 169 PRO n 1 170 GLU n 1 171 THR n 1 172 GLN n 1 173 ASP n 1 174 THR n 1 175 THR n 1 176 TYR n 1 177 LEU n 1 178 TRP n 1 179 TRP n 1 180 ILE n 1 181 ASN n 1 182 ASN n 1 183 GLN n 1 184 SER n 1 185 LEU n 1 186 PRO n 1 187 VAL n 1 188 SER n 1 189 PRO n 1 190 ARG n 1 191 LEU n 1 192 GLN n 1 193 LEU n 1 194 SER n 1 195 ASN n 1 196 GLY n 1 197 ASN n 1 198 ARG n 1 199 THR n 1 200 LEU n 1 201 THR n 1 202 LEU n 1 203 LEU n 1 204 SER n 1 205 VAL n 1 206 THR n 1 207 ARG n 1 208 ASN n 1 209 ASP n 1 210 THR n 1 211 GLY n 1 212 PRO n 1 213 TYR n 1 214 GLU n 1 215 CYS n 1 216 GLU n 1 217 ILE n 1 218 GLN n 1 219 ASN n 1 220 PRO n 1 221 VAL n 1 222 SER n 1 223 ALA n 1 224 ASN n 1 225 ARG n 1 226 SER n 1 227 ASP n 1 228 PRO n 1 229 VAL n 1 230 THR n 1 231 LEU n 1 232 ASN n 1 233 VAL n 1 234 THR n 1 235 TYR n 1 236 GLY n 1 237 PRO n 1 238 ASP n 1 239 THR n 1 240 PRO n 1 241 THR n 1 242 ILE n 1 243 SER n 1 244 PRO n 1 245 SER n 1 246 ASP n 1 247 THR n 1 248 TYR n 1 249 TYR n 1 250 ARG n 1 251 PRO n 1 252 GLY n 1 253 ALA n 1 254 ASN n 1 255 LEU n 1 256 SER n 1 257 LEU n 1 258 SER n 1 259 CYS n 1 260 TYR n 1 261 ALA n 1 262 ALA n 1 263 SER n 1 264 ASN n 1 265 PRO n 1 266 PRO n 1 267 ALA n 1 268 GLN n 1 269 TYR n 1 270 SER n 1 271 TRP n 1 272 LEU n 1 273 ILE n 1 274 ASN n 1 275 GLY n 1 276 THR n 1 277 PHE n 1 278 GLN n 1 279 GLN n 1 280 SER n 1 281 THR n 1 282 GLN n 1 283 GLU n 1 284 LEU n 1 285 PHE n 1 286 ILE n 1 287 PRO n 1 288 ASN n 1 289 ILE n 1 290 THR n 1 291 VAL n 1 292 ASN n 1 293 ASN n 1 294 SER n 1 295 GLY n 1 296 SER n 1 297 TYR n 1 298 THR n 1 299 CYS n 1 300 HIS n 1 301 ALA n 1 302 ASN n 1 303 ASN n 1 304 SER n 1 305 VAL n 1 306 THR n 1 307 GLY n 1 308 CYS n 1 309 ASN n 1 310 ARG n 1 311 THR n 1 312 THR n 1 313 VAL n 1 314 LYS n 1 315 THR n 1 316 ILE n 1 317 ILE n 1 318 VAL n 1 319 THR n 1 320 GLU n 1 321 LEU n 1 322 SER n 1 323 PRO n 1 324 VAL n 1 325 VAL n 1 326 ALA n 1 327 LYS n 1 328 PRO n 1 329 GLN n 1 330 ILE n 1 331 LYS n 1 332 ALA n 1 333 SER n 1 334 LYS n 1 335 THR n 1 336 THR n 1 337 VAL n 1 338 THR n 1 339 GLY n 1 340 ASP n 1 341 LYS n 1 342 ASP n 1 343 SER n 1 344 VAL n 1 345 ASN n 1 346 LEU n 1 347 THR n 1 348 CYS n 1 349 SER n 1 350 THR n 1 351 ASN n 1 352 ASP n 1 353 THR n 1 354 GLY n 1 355 ILE n 1 356 SER n 1 357 ILE n 1 358 ARG n 1 359 TRP n 1 360 PHE n 1 361 PHE n 1 362 LYS n 1 363 ASN n 1 364 GLN n 1 365 SER n 1 366 LEU n 1 367 PRO n 1 368 SER n 1 369 SER n 1 370 GLU n 1 371 ARG n 1 372 MET n 1 373 LYS n 1 374 LEU n 1 375 SER n 1 376 GLN n 1 377 GLY n 1 378 ASN n 1 379 THR n 1 380 THR n 1 381 LEU n 1 382 SER n 1 383 ILE n 1 384 ASN n 1 385 PRO n 1 386 VAL n 1 387 LYS n 1 388 ARG n 1 389 GLU n 1 390 ASP n 1 391 ALA n 1 392 GLY n 1 393 THR n 1 394 TYR n 1 395 TRP n 1 396 CYS n 1 397 GLU n 1 398 VAL n 1 399 PHE n 1 400 ASN n 1 401 PRO n 1 402 ILE n 1 403 SER n 1 404 LYS n 1 405 ASN n 1 406 GLN n 1 407 SER n 1 408 ASP n 1 409 PRO n 1 410 ILE n 1 411 MET n 1 412 LEU n 1 413 ASN n 1 414 VAL n 1 415 ASN n 1 416 TYR n 1 417 ASN n 1 418 ALA n 1 419 LEU n 1 420 PRO n 1 421 GLN n 1 422 GLU n 1 423 ASN n 1 424 GLY n 1 425 LEU n 1 426 SER n 1 427 PRO n 1 428 GLY n 1 429 HIS n 1 430 HIS n 1 431 HIS n 1 432 HIS n 1 433 HIS n 1 434 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 434 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CEACAM1, BGP, BGP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? D . n A 1 2 GLY 2 2 ? ? ? D . n A 1 3 HIS 3 3 ? ? ? D . n A 1 4 LEU 4 4 ? ? ? D . n A 1 5 SER 5 5 ? ? ? D . n A 1 6 ALA 6 6 ? ? ? D . n A 1 7 PRO 7 7 ? ? ? D . n A 1 8 LEU 8 8 ? ? ? D . n A 1 9 HIS 9 9 ? ? ? D . n A 1 10 ARG 10 10 ? ? ? D . n A 1 11 VAL 11 11 ? ? ? D . n A 1 12 ARG 12 12 ? ? ? D . n A 1 13 VAL 13 13 ? ? ? D . n A 1 14 PRO 14 14 ? ? ? D . n A 1 15 TRP 15 15 ? ? ? D . n A 1 16 GLN 16 16 ? ? ? D . n A 1 17 GLY 17 17 ? ? ? D . n A 1 18 LEU 18 18 ? ? ? D . n A 1 19 LEU 19 19 ? ? ? D . n A 1 20 LEU 20 20 ? ? ? D . n A 1 21 THR 21 21 ? ? ? D . n A 1 22 ALA 22 22 ? ? ? D . n A 1 23 SER 23 23 ? ? ? D . n A 1 24 LEU 24 24 ? ? ? D . n A 1 25 LEU 25 25 ? ? ? D . n A 1 26 THR 26 26 ? ? ? D . n A 1 27 PHE 27 27 ? ? ? D . n A 1 28 TRP 28 28 ? ? ? D . n A 1 29 ASN 29 29 ? ? ? D . n A 1 30 PRO 30 30 ? ? ? D . n A 1 31 PRO 31 31 ? ? ? D . n A 1 32 THR 32 32 ? ? ? D . n A 1 33 THR 33 33 ? ? ? D . n A 1 34 ALA 34 34 ? ? ? D . n A 1 35 GLN 35 35 35 GLN GLN D . n A 1 36 LEU 36 36 36 LEU LEU D . n A 1 37 THR 37 37 37 THR THR D . n A 1 38 THR 38 38 38 THR THR D . n A 1 39 GLU 39 39 39 GLU GLU D . n A 1 40 SER 40 40 40 SER SER D . n A 1 41 MET 41 41 41 MET MET D . n A 1 42 PRO 42 42 42 PRO PRO D . n A 1 43 PHE 43 43 43 PHE PHE D . n A 1 44 ASN 44 44 44 ASN ASN D . n A 1 45 VAL 45 45 45 VAL VAL D . n A 1 46 ALA 46 46 46 ALA ALA D . n A 1 47 GLU 47 47 47 GLU GLU D . n A 1 48 GLY 48 48 48 GLY GLY D . n A 1 49 LYS 49 49 49 LYS LYS D . n A 1 50 GLU 50 50 50 GLU GLU D . n A 1 51 VAL 51 51 51 VAL VAL D . n A 1 52 LEU 52 52 52 LEU LEU D . n A 1 53 LEU 53 53 53 LEU LEU D . n A 1 54 LEU 54 54 54 LEU LEU D . n A 1 55 VAL 55 55 55 VAL VAL D . n A 1 56 HIS 56 56 56 HIS HIS D . n A 1 57 ASN 57 57 57 ASN ASN D . n A 1 58 LEU 58 58 58 LEU LEU D . n A 1 59 PRO 59 59 59 PRO PRO D . n A 1 60 GLN 60 60 60 GLN GLN D . n A 1 61 GLN 61 61 61 GLN GLN D . n A 1 62 LEU 62 62 62 LEU LEU D . n A 1 63 PHE 63 63 63 PHE PHE D . n A 1 64 GLY 64 64 64 GLY GLY D . n A 1 65 TYR 65 65 65 TYR TYR D . n A 1 66 SER 66 66 66 SER SER D . n A 1 67 TRP 67 67 67 TRP TRP D . n A 1 68 TYR 68 68 68 TYR TYR D . n A 1 69 LYS 69 69 69 LYS LYS D . n A 1 70 GLY 70 70 70 GLY GLY D . n A 1 71 GLU 71 71 71 GLU GLU D . n A 1 72 ARG 72 72 72 ARG ARG D . n A 1 73 VAL 73 73 73 VAL VAL D . n A 1 74 ASP 74 74 74 ASP ASP D . n A 1 75 GLY 75 75 75 GLY GLY D . n A 1 76 ASN 76 76 76 ASN ASN D . n A 1 77 ARG 77 77 77 ARG ARG D . n A 1 78 GLN 78 78 78 GLN GLN D . n A 1 79 ILE 79 79 79 ILE ILE D . n A 1 80 VAL 80 80 80 VAL VAL D . n A 1 81 GLY 81 81 81 GLY GLY D . n A 1 82 TYR 82 82 82 TYR TYR D . n A 1 83 ALA 83 83 83 ALA ALA D . n A 1 84 ILE 84 84 84 ILE ILE D . n A 1 85 GLY 85 85 85 GLY GLY D . n A 1 86 THR 86 86 86 THR THR D . n A 1 87 GLN 87 87 87 GLN GLN D . n A 1 88 GLN 88 88 88 GLN GLN D . n A 1 89 ALA 89 89 89 ALA ALA D . n A 1 90 THR 90 90 90 THR THR D . n A 1 91 PRO 91 91 91 PRO PRO D . n A 1 92 GLY 92 92 92 GLY GLY D . n A 1 93 PRO 93 93 93 PRO PRO D . n A 1 94 ALA 94 94 94 ALA ALA D . n A 1 95 ASN 95 95 95 ASN ASN D . n A 1 96 SER 96 96 96 SER SER D . n A 1 97 GLY 97 97 97 GLY GLY D . n A 1 98 ARG 98 98 98 ARG ARG D . n A 1 99 GLU 99 99 99 GLU GLU D . n A 1 100 THR 100 100 100 THR THR D . n A 1 101 ILE 101 101 101 ILE ILE D . n A 1 102 TYR 102 102 102 TYR TYR D . n A 1 103 PRO 103 103 103 PRO PRO D . n A 1 104 ASN 104 104 104 ASN ASN D . n A 1 105 ALA 105 105 105 ALA ALA D . n A 1 106 SER 106 106 106 SER SER D . n A 1 107 LEU 107 107 107 LEU LEU D . n A 1 108 LEU 108 108 108 LEU LEU D . n A 1 109 ILE 109 109 109 ILE ILE D . n A 1 110 GLN 110 110 110 GLN GLN D . n A 1 111 ASN 111 111 111 ASN ASN D . n A 1 112 VAL 112 112 112 VAL VAL D . n A 1 113 THR 113 113 113 THR THR D . n A 1 114 GLN 114 114 114 GLN GLN D . n A 1 115 ASN 115 115 115 ASN ASN D . n A 1 116 ASP 116 116 116 ASP ASP D . n A 1 117 THR 117 117 117 THR THR D . n A 1 118 GLY 118 118 118 GLY GLY D . n A 1 119 PHE 119 119 119 PHE PHE D . n A 1 120 TYR 120 120 120 TYR TYR D . n A 1 121 THR 121 121 121 THR THR D . n A 1 122 LEU 122 122 122 LEU LEU D . n A 1 123 GLN 123 123 123 GLN GLN D . n A 1 124 VAL 124 124 124 VAL VAL D . n A 1 125 ILE 125 125 125 ILE ILE D . n A 1 126 LYS 126 126 126 LYS LYS D . n A 1 127 SER 127 127 127 SER SER D . n A 1 128 ASP 128 128 128 ASP ASP D . n A 1 129 LEU 129 129 129 LEU LEU D . n A 1 130 VAL 130 130 130 VAL VAL D . n A 1 131 ASN 131 131 131 ASN ASN D . n A 1 132 GLU 132 132 132 GLU GLU D . n A 1 133 GLU 133 133 133 GLU GLU D . n A 1 134 ALA 134 134 134 ALA ALA D . n A 1 135 THR 135 135 135 THR THR D . n A 1 136 GLY 136 136 136 GLY GLY D . n A 1 137 GLN 137 137 137 GLN GLN D . n A 1 138 PHE 138 138 138 PHE PHE D . n A 1 139 HIS 139 139 139 HIS HIS D . n A 1 140 VAL 140 140 140 VAL VAL D . n A 1 141 TYR 141 141 141 TYR TYR D . n A 1 142 PRO 142 142 142 PRO PRO D . n A 1 143 GLU 143 143 143 GLU GLU D . n A 1 144 LEU 144 144 144 LEU LEU D . n A 1 145 PRO 145 145 145 PRO PRO D . n A 1 146 LYS 146 146 146 LYS LYS D . n A 1 147 PRO 147 147 147 PRO PRO D . n A 1 148 SER 148 148 148 SER SER D . n A 1 149 ILE 149 149 149 ILE ILE D . n A 1 150 SER 150 150 150 SER SER D . n A 1 151 SER 151 151 151 SER SER D . n A 1 152 ASN 152 152 152 ASN ASN D . n A 1 153 ASN 153 153 153 ASN ASN D . n A 1 154 SER 154 154 154 SER SER D . n A 1 155 ASN 155 155 155 ASN ASN D . n A 1 156 PRO 156 156 156 PRO PRO D . n A 1 157 VAL 157 157 157 VAL VAL D . n A 1 158 GLU 158 158 158 GLU GLU D . n A 1 159 ASP 159 159 159 ASP ASP D . n A 1 160 LYS 160 160 160 LYS LYS D . n A 1 161 ASP 161 161 161 ASP ASP D . n A 1 162 ALA 162 162 162 ALA ALA D . n A 1 163 VAL 163 163 163 VAL VAL D . n A 1 164 ALA 164 164 164 ALA ALA D . n A 1 165 PHE 165 165 165 PHE PHE D . n A 1 166 THR 166 166 166 THR THR D . n A 1 167 CYS 167 167 167 CYS CYS D . n A 1 168 GLU 168 168 168 GLU GLU D . n A 1 169 PRO 169 169 169 PRO PRO D . n A 1 170 GLU 170 170 170 GLU GLU D . n A 1 171 THR 171 171 171 THR THR D . n A 1 172 GLN 172 172 172 GLN GLN D . n A 1 173 ASP 173 173 173 ASP ASP D . n A 1 174 THR 174 174 174 THR THR D . n A 1 175 THR 175 175 175 THR THR D . n A 1 176 TYR 176 176 176 TYR TYR D . n A 1 177 LEU 177 177 177 LEU LEU D . n A 1 178 TRP 178 178 178 TRP TRP D . n A 1 179 TRP 179 179 179 TRP TRP D . n A 1 180 ILE 180 180 180 ILE ILE D . n A 1 181 ASN 181 181 181 ASN ASN D . n A 1 182 ASN 182 182 182 ASN ASN D . n A 1 183 GLN 183 183 183 GLN GLN D . n A 1 184 SER 184 184 184 SER SER D . n A 1 185 LEU 185 185 185 LEU LEU D . n A 1 186 PRO 186 186 186 PRO PRO D . n A 1 187 VAL 187 187 187 VAL VAL D . n A 1 188 SER 188 188 188 SER SER D . n A 1 189 PRO 189 189 189 PRO PRO D . n A 1 190 ARG 190 190 190 ARG ARG D . n A 1 191 LEU 191 191 191 LEU LEU D . n A 1 192 GLN 192 192 192 GLN GLN D . n A 1 193 LEU 193 193 193 LEU LEU D . n A 1 194 SER 194 194 194 SER SER D . n A 1 195 ASN 195 195 195 ASN ASN D . n A 1 196 GLY 196 196 196 GLY GLY D . n A 1 197 ASN 197 197 197 ASN ASN D . n A 1 198 ARG 198 198 198 ARG ARG D . n A 1 199 THR 199 199 199 THR THR D . n A 1 200 LEU 200 200 200 LEU LEU D . n A 1 201 THR 201 201 201 THR THR D . n A 1 202 LEU 202 202 202 LEU LEU D . n A 1 203 LEU 203 203 203 LEU LEU D . n A 1 204 SER 204 204 204 SER SER D . n A 1 205 VAL 205 205 205 VAL VAL D . n A 1 206 THR 206 206 206 THR THR D . n A 1 207 ARG 207 207 207 ARG ARG D . n A 1 208 ASN 208 208 208 ASN ASN D . n A 1 209 ASP 209 209 209 ASP ASP D . n A 1 210 THR 210 210 210 THR THR D . n A 1 211 GLY 211 211 211 GLY GLY D . n A 1 212 PRO 212 212 212 PRO PRO D . n A 1 213 TYR 213 213 213 TYR TYR D . n A 1 214 GLU 214 214 214 GLU GLU D . n A 1 215 CYS 215 215 215 CYS CYS D . n A 1 216 GLU 216 216 216 GLU GLU D . n A 1 217 ILE 217 217 217 ILE ILE D . n A 1 218 GLN 218 218 218 GLN GLN D . n A 1 219 ASN 219 219 219 ASN ASN D . n A 1 220 PRO 220 220 220 PRO PRO D . n A 1 221 VAL 221 221 221 VAL VAL D . n A 1 222 SER 222 222 222 SER SER D . n A 1 223 ALA 223 223 223 ALA ALA D . n A 1 224 ASN 224 224 224 ASN ASN D . n A 1 225 ARG 225 225 225 ARG ARG D . n A 1 226 SER 226 226 226 SER SER D . n A 1 227 ASP 227 227 227 ASP ASP D . n A 1 228 PRO 228 228 228 PRO PRO D . n A 1 229 VAL 229 229 229 VAL VAL D . n A 1 230 THR 230 230 230 THR THR D . n A 1 231 LEU 231 231 231 LEU LEU D . n A 1 232 ASN 232 232 232 ASN ASN D . n A 1 233 VAL 233 233 233 VAL VAL D . n A 1 234 THR 234 234 234 THR THR D . n A 1 235 TYR 235 235 ? ? ? D . n A 1 236 GLY 236 236 ? ? ? D . n A 1 237 PRO 237 237 ? ? ? D . n A 1 238 ASP 238 238 ? ? ? D . n A 1 239 THR 239 239 ? ? ? D . n A 1 240 PRO 240 240 ? ? ? D . n A 1 241 THR 241 241 ? ? ? D . n A 1 242 ILE 242 242 ? ? ? D . n A 1 243 SER 243 243 ? ? ? D . n A 1 244 PRO 244 244 ? ? ? D . n A 1 245 SER 245 245 ? ? ? D . n A 1 246 ASP 246 246 ? ? ? D . n A 1 247 THR 247 247 ? ? ? D . n A 1 248 TYR 248 248 ? ? ? D . n A 1 249 TYR 249 249 ? ? ? D . n A 1 250 ARG 250 250 ? ? ? D . n A 1 251 PRO 251 251 ? ? ? D . n A 1 252 GLY 252 252 ? ? ? D . n A 1 253 ALA 253 253 ? ? ? D . n A 1 254 ASN 254 254 ? ? ? D . n A 1 255 LEU 255 255 ? ? ? D . n A 1 256 SER 256 256 ? ? ? D . n A 1 257 LEU 257 257 ? ? ? D . n A 1 258 SER 258 258 ? ? ? D . n A 1 259 CYS 259 259 ? ? ? D . n A 1 260 TYR 260 260 ? ? ? D . n A 1 261 ALA 261 261 ? ? ? D . n A 1 262 ALA 262 262 ? ? ? D . n A 1 263 SER 263 263 ? ? ? D . n A 1 264 ASN 264 264 ? ? ? D . n A 1 265 PRO 265 265 ? ? ? D . n A 1 266 PRO 266 266 ? ? ? D . n A 1 267 ALA 267 267 ? ? ? D . n A 1 268 GLN 268 268 ? ? ? D . n A 1 269 TYR 269 269 ? ? ? D . n A 1 270 SER 270 270 ? ? ? D . n A 1 271 TRP 271 271 ? ? ? D . n A 1 272 LEU 272 272 ? ? ? D . n A 1 273 ILE 273 273 ? ? ? D . n A 1 274 ASN 274 274 ? ? ? D . n A 1 275 GLY 275 275 ? ? ? D . n A 1 276 THR 276 276 ? ? ? D . n A 1 277 PHE 277 277 ? ? ? D . n A 1 278 GLN 278 278 ? ? ? D . n A 1 279 GLN 279 279 ? ? ? D . n A 1 280 SER 280 280 ? ? ? D . n A 1 281 THR 281 281 ? ? ? D . n A 1 282 GLN 282 282 ? ? ? D . n A 1 283 GLU 283 283 ? ? ? D . n A 1 284 LEU 284 284 ? ? ? D . n A 1 285 PHE 285 285 ? ? ? D . n A 1 286 ILE 286 286 ? ? ? D . n A 1 287 PRO 287 287 ? ? ? D . n A 1 288 ASN 288 288 ? ? ? D . n A 1 289 ILE 289 289 ? ? ? D . n A 1 290 THR 290 290 ? ? ? D . n A 1 291 VAL 291 291 ? ? ? D . n A 1 292 ASN 292 292 ? ? ? D . n A 1 293 ASN 293 293 ? ? ? D . n A 1 294 SER 294 294 ? ? ? D . n A 1 295 GLY 295 295 ? ? ? D . n A 1 296 SER 296 296 ? ? ? D . n A 1 297 TYR 297 297 ? ? ? D . n A 1 298 THR 298 298 ? ? ? D . n A 1 299 CYS 299 299 ? ? ? D . n A 1 300 HIS 300 300 ? ? ? D . n A 1 301 ALA 301 301 ? ? ? D . n A 1 302 ASN 302 302 ? ? ? D . n A 1 303 ASN 303 303 ? ? ? D . n A 1 304 SER 304 304 ? ? ? D . n A 1 305 VAL 305 305 ? ? ? D . n A 1 306 THR 306 306 ? ? ? D . n A 1 307 GLY 307 307 ? ? ? D . n A 1 308 CYS 308 308 ? ? ? D . n A 1 309 ASN 309 309 ? ? ? D . n A 1 310 ARG 310 310 ? ? ? D . n A 1 311 THR 311 311 ? ? ? D . n A 1 312 THR 312 312 ? ? ? D . n A 1 313 VAL 313 313 ? ? ? D . n A 1 314 LYS 314 314 ? ? ? D . n A 1 315 THR 315 315 ? ? ? D . n A 1 316 ILE 316 316 ? ? ? D . n A 1 317 ILE 317 317 ? ? ? D . n A 1 318 VAL 318 318 ? ? ? D . n A 1 319 THR 319 319 ? ? ? D . n A 1 320 GLU 320 320 ? ? ? D . n A 1 321 LEU 321 321 ? ? ? D . n A 1 322 SER 322 322 ? ? ? D . n A 1 323 PRO 323 323 ? ? ? D . n A 1 324 VAL 324 324 ? ? ? D . n A 1 325 VAL 325 325 ? ? ? D . n A 1 326 ALA 326 326 ? ? ? D . n A 1 327 LYS 327 327 ? ? ? D . n A 1 328 PRO 328 328 ? ? ? D . n A 1 329 GLN 329 329 ? ? ? D . n A 1 330 ILE 330 330 ? ? ? D . n A 1 331 LYS 331 331 ? ? ? D . n A 1 332 ALA 332 332 ? ? ? D . n A 1 333 SER 333 333 ? ? ? D . n A 1 334 LYS 334 334 ? ? ? D . n A 1 335 THR 335 335 ? ? ? D . n A 1 336 THR 336 336 ? ? ? D . n A 1 337 VAL 337 337 ? ? ? D . n A 1 338 THR 338 338 ? ? ? D . n A 1 339 GLY 339 339 ? ? ? D . n A 1 340 ASP 340 340 ? ? ? D . n A 1 341 LYS 341 341 ? ? ? D . n A 1 342 ASP 342 342 ? ? ? D . n A 1 343 SER 343 343 ? ? ? D . n A 1 344 VAL 344 344 ? ? ? D . n A 1 345 ASN 345 345 ? ? ? D . n A 1 346 LEU 346 346 ? ? ? D . n A 1 347 THR 347 347 ? ? ? D . n A 1 348 CYS 348 348 ? ? ? D . n A 1 349 SER 349 349 ? ? ? D . n A 1 350 THR 350 350 ? ? ? D . n A 1 351 ASN 351 351 ? ? ? D . n A 1 352 ASP 352 352 ? ? ? D . n A 1 353 THR 353 353 ? ? ? D . n A 1 354 GLY 354 354 ? ? ? D . n A 1 355 ILE 355 355 ? ? ? D . n A 1 356 SER 356 356 ? ? ? D . n A 1 357 ILE 357 357 ? ? ? D . n A 1 358 ARG 358 358 ? ? ? D . n A 1 359 TRP 359 359 ? ? ? D . n A 1 360 PHE 360 360 ? ? ? D . n A 1 361 PHE 361 361 ? ? ? D . n A 1 362 LYS 362 362 ? ? ? D . n A 1 363 ASN 363 363 ? ? ? D . n A 1 364 GLN 364 364 ? ? ? D . n A 1 365 SER 365 365 ? ? ? D . n A 1 366 LEU 366 366 ? ? ? D . n A 1 367 PRO 367 367 ? ? ? D . n A 1 368 SER 368 368 ? ? ? D . n A 1 369 SER 369 369 ? ? ? D . n A 1 370 GLU 370 370 ? ? ? D . n A 1 371 ARG 371 371 ? ? ? D . n A 1 372 MET 372 372 ? ? ? D . n A 1 373 LYS 373 373 ? ? ? D . n A 1 374 LEU 374 374 ? ? ? D . n A 1 375 SER 375 375 ? ? ? D . n A 1 376 GLN 376 376 ? ? ? D . n A 1 377 GLY 377 377 ? ? ? D . n A 1 378 ASN 378 378 ? ? ? D . n A 1 379 THR 379 379 ? ? ? D . n A 1 380 THR 380 380 ? ? ? D . n A 1 381 LEU 381 381 ? ? ? D . n A 1 382 SER 382 382 ? ? ? D . n A 1 383 ILE 383 383 ? ? ? D . n A 1 384 ASN 384 384 ? ? ? D . n A 1 385 PRO 385 385 ? ? ? D . n A 1 386 VAL 386 386 ? ? ? D . n A 1 387 LYS 387 387 ? ? ? D . n A 1 388 ARG 388 388 ? ? ? D . n A 1 389 GLU 389 389 ? ? ? D . n A 1 390 ASP 390 390 ? ? ? D . n A 1 391 ALA 391 391 ? ? ? D . n A 1 392 GLY 392 392 ? ? ? D . n A 1 393 THR 393 393 ? ? ? D . n A 1 394 TYR 394 394 ? ? ? D . n A 1 395 TRP 395 395 ? ? ? D . n A 1 396 CYS 396 396 ? ? ? D . n A 1 397 GLU 397 397 ? ? ? D . n A 1 398 VAL 398 398 ? ? ? D . n A 1 399 PHE 399 399 ? ? ? D . n A 1 400 ASN 400 400 ? ? ? D . n A 1 401 PRO 401 401 ? ? ? D . n A 1 402 ILE 402 402 ? ? ? D . n A 1 403 SER 403 403 ? ? ? D . n A 1 404 LYS 404 404 ? ? ? D . n A 1 405 ASN 405 405 ? ? ? D . n A 1 406 GLN 406 406 ? ? ? D . n A 1 407 SER 407 407 ? ? ? D . n A 1 408 ASP 408 408 ? ? ? D . n A 1 409 PRO 409 409 ? ? ? D . n A 1 410 ILE 410 410 ? ? ? D . n A 1 411 MET 411 411 ? ? ? D . n A 1 412 LEU 412 412 ? ? ? D . n A 1 413 ASN 413 413 ? ? ? D . n A 1 414 VAL 414 414 ? ? ? D . n A 1 415 ASN 415 415 ? ? ? D . n A 1 416 TYR 416 416 ? ? ? D . n A 1 417 ASN 417 417 ? ? ? D . n A 1 418 ALA 418 418 ? ? ? D . n A 1 419 LEU 419 419 ? ? ? D . n A 1 420 PRO 420 420 ? ? ? D . n A 1 421 GLN 421 421 ? ? ? D . n A 1 422 GLU 422 422 ? ? ? D . n A 1 423 ASN 423 423 ? ? ? D . n A 1 424 GLY 424 424 ? ? ? D . n A 1 425 LEU 425 425 ? ? ? D . n A 1 426 SER 426 426 ? ? ? D . n A 1 427 PRO 427 427 ? ? ? D . n A 1 428 GLY 428 428 ? ? ? D . n A 1 429 HIS 429 429 ? ? ? D . n A 1 430 HIS 430 430 ? ? ? D . n A 1 431 HIS 431 431 ? ? ? D . n A 1 432 HIS 432 432 ? ? ? D . n A 1 433 HIS 433 433 ? ? ? D . n A 1 434 HIS 434 434 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 501 501 NAG NAG D . C 2 NAG 1 502 503 NAG NAG D . D 2 NAG 1 503 504 NAG NAG D . E 2 NAG 1 504 505 NAG NAG D . F 2 NAG 1 505 506 NAG NAG D . G 2 NAG 1 506 507 NAG NAG D . H 2 NAG 1 507 508 NAG NAG D . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9GH6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9GH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9GH6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9GH6 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 1696 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.559 ? 2323 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 6.303 ? 265 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.047 ? 285 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 300 ? f_plane_restr ? ? # _struct.entry_id 9GH6 _struct.title 'CEACAM1 (35-234), focused refinement in the complex with CbpF' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9GH6 _struct_keywords.text 'bacterial pathogenesis, adhesin, immunomodulation, host-pathogen interaction, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CEAM1_HUMAN _struct_ref.pdbx_db_accession P13688 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQQLFGYSWYKGERVDGNRQIV GYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDK DAVAFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTE LSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFN PISKNQSDPIMLNVNYNALPQENGLSPG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9GH6 _struct_ref_seq.pdbx_strand_id D _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 428 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13688 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 428 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 428 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9GH6 HIS D 429 ? UNP P13688 ? ? 'expression tag' 429 1 1 9GH6 HIS D 430 ? UNP P13688 ? ? 'expression tag' 430 2 1 9GH6 HIS D 431 ? UNP P13688 ? ? 'expression tag' 431 3 1 9GH6 HIS D 432 ? UNP P13688 ? ? 'expression tag' 432 4 1 9GH6 HIS D 433 ? UNP P13688 ? ? 'expression tag' 433 5 1 9GH6 HIS D 434 ? UNP P13688 ? ? 'expression tag' 434 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 74 ? ASN A 76 ? ASP D 74 ASN D 76 5 ? 3 HELX_P HELX_P2 AA2 THR A 113 ? THR A 117 ? THR D 113 THR D 117 5 ? 5 HELX_P HELX_P3 AA3 THR A 206 ? THR A 210 ? THR D 206 THR D 210 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 167 SG ? ? ? 1_555 A CYS 215 SG ? ? D CYS 167 D CYS 215 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 104 ND2 ? ? ? 1_555 B NAG . C1 ? ? D ASN 104 D NAG 501 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 111 ND2 ? ? ? 1_555 C NAG . C1 ? ? D ASN 111 D NAG 502 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale3 covale one ? A ASN 152 ND2 ? ? ? 1_555 F NAG . C1 ? ? D ASN 152 D NAG 505 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale4 covale one ? A ASN 182 ND2 ? ? ? 1_555 D NAG . C1 ? ? D ASN 182 D NAG 503 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale5 covale one ? A ASN 197 ND2 ? ? ? 1_555 E NAG . C1 ? ? D ASN 197 D NAG 504 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale6 covale one ? A ASN 208 ND2 ? ? ? 1_555 H NAG . C1 ? ? D ASN 208 D NAG 507 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale7 covale one ? A ASN 224 ND2 ? ? ? 1_555 G NAG . C1 ? ? D ASN 224 D NAG 506 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 104 ? NAG D 501 ? 1_555 ASN D 104 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 111 ? NAG D 502 ? 1_555 ASN D 111 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG D . ? ASN A 182 ? NAG D 503 ? 1_555 ASN D 182 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG E . ? ASN A 197 ? NAG D 504 ? 1_555 ASN D 197 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 NAG F . ? ASN A 152 ? NAG D 505 ? 1_555 ASN D 152 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 6 NAG G . ? ASN A 224 ? NAG D 506 ? 1_555 ASN D 224 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 7 NAG H . ? ASN A 208 ? NAG D 507 ? 1_555 ASN D 208 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 8 CYS A 167 ? CYS A 215 ? CYS D 167 ? 1_555 CYS D 215 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 41 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 41 _struct_mon_prot_cis.auth_asym_id D _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 42 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 42 _struct_mon_prot_cis.pdbx_auth_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 37 ? MET A 41 ? THR D 37 MET D 41 AA1 2 VAL A 51 ? HIS A 56 ? VAL D 51 HIS D 56 AA1 3 LEU A 107 ? ILE A 109 ? LEU D 107 ILE D 109 AA1 4 GLU A 99 ? ILE A 101 ? GLU D 99 ILE D 101 AA2 1 ASN A 44 ? ALA A 46 ? ASN D 44 ALA D 46 AA2 2 ASN A 131 ? TYR A 141 ? ASN D 131 TYR D 141 AA2 3 GLY A 118 ? LYS A 126 ? GLY D 118 LYS D 126 AA2 4 LEU A 62 ? LYS A 69 ? LEU D 62 LYS D 69 AA2 5 GLN A 78 ? ALA A 83 ? GLN D 78 ALA D 83 AA2 6 GLN A 88 ? PRO A 91 ? GLN D 88 PRO D 91 AA3 1 ILE A 149 ? SER A 151 ? ILE D 149 SER D 151 AA3 2 ALA A 164 ? CYS A 167 ? ALA D 164 CYS D 167 AA3 3 THR A 199 ? LEU A 202 ? THR D 199 LEU D 202 AA3 4 LEU A 191 ? SER A 194 ? LEU D 191 SER D 194 AA4 1 GLN A 183 ? SER A 184 ? GLN D 183 SER D 184 AA4 2 THR A 175 ? ILE A 180 ? THR D 175 ILE D 180 AA4 3 TYR A 213 ? GLN A 218 ? TYR D 213 GLN D 218 AA4 4 ALA A 223 ? ARG A 225 ? ALA D 223 ARG D 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 39 ? N GLU D 39 O LEU A 54 ? O LEU D 54 AA1 2 3 N LEU A 53 ? N LEU D 53 O LEU A 107 ? O LEU D 107 AA1 3 4 O LEU A 108 ? O LEU D 108 N THR A 100 ? N THR D 100 AA2 1 2 N VAL A 45 ? N VAL D 45 O TYR A 141 ? O TYR D 141 AA2 2 3 O GLY A 136 ? O GLY D 136 N TYR A 120 ? N TYR D 120 AA2 3 4 O ILE A 125 ? O ILE D 125 N PHE A 63 ? N PHE D 63 AA2 4 5 N TRP A 67 ? N TRP D 67 O ILE A 79 ? O ILE D 79 AA2 5 6 N GLY A 81 ? N GLY D 81 O THR A 90 ? O THR D 90 AA3 1 2 N SER A 150 ? N SER D 150 O THR A 166 ? O THR D 166 AA3 2 3 N PHE A 165 ? N PHE D 165 O LEU A 200 ? O LEU D 200 AA3 3 4 O THR A 201 ? O THR D 201 N GLN A 192 ? N GLN D 192 AA4 1 2 O GLN A 183 ? O GLN D 183 N ILE A 180 ? N ILE D 180 AA4 2 3 N TRP A 179 ? N TRP D 179 O GLU A 214 ? O GLU D 214 AA4 3 4 N ILE A 217 ? N ILE D 217 O ASN A 224 ? O ASN D 224 # _pdbx_entry_details.entry_id 9GH6 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 D GLU 170 ? ? HH D TYR 176 ? ? 1.60 2 1 H D LYS 146 ? ? O6 D NAG 506 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA D 105 ? ? 71.10 -2.12 2 1 ASP D 173 ? ? 39.26 35.34 3 1 PRO D 220 ? ? -59.66 -5.80 4 1 ALA D 223 ? ? -172.63 140.04 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9GH6 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' # _em_3d_reconstruction.entry_id 9GH6 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'Map derived from shift of reconstruction center of full complex and masked refinement' _em_3d_reconstruction.resolution 3.0 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 330202 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name '1 CEACAM1 extracellular domain (35-234) in the context of the heterohexameric complex with CbpF' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9GH6 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'ZEMLIN TABLEAU' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9GH6 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9GH6 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9GH6 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D MET 1 ? A MET 1 2 1 Y 1 D GLY 2 ? A GLY 2 3 1 Y 1 D HIS 3 ? A HIS 3 4 1 Y 1 D LEU 4 ? A LEU 4 5 1 Y 1 D SER 5 ? A SER 5 6 1 Y 1 D ALA 6 ? A ALA 6 7 1 Y 1 D PRO 7 ? A PRO 7 8 1 Y 1 D LEU 8 ? A LEU 8 9 1 Y 1 D HIS 9 ? A HIS 9 10 1 Y 1 D ARG 10 ? A ARG 10 11 1 Y 1 D VAL 11 ? A VAL 11 12 1 Y 1 D ARG 12 ? A ARG 12 13 1 Y 1 D VAL 13 ? A VAL 13 14 1 Y 1 D PRO 14 ? A PRO 14 15 1 Y 1 D TRP 15 ? A TRP 15 16 1 Y 1 D GLN 16 ? A GLN 16 17 1 Y 1 D GLY 17 ? A GLY 17 18 1 Y 1 D LEU 18 ? A LEU 18 19 1 Y 1 D LEU 19 ? A LEU 19 20 1 Y 1 D LEU 20 ? A LEU 20 21 1 Y 1 D THR 21 ? A THR 21 22 1 Y 1 D ALA 22 ? A ALA 22 23 1 Y 1 D SER 23 ? A SER 23 24 1 Y 1 D LEU 24 ? A LEU 24 25 1 Y 1 D LEU 25 ? A LEU 25 26 1 Y 1 D THR 26 ? A THR 26 27 1 Y 1 D PHE 27 ? A PHE 27 28 1 Y 1 D TRP 28 ? A TRP 28 29 1 Y 1 D ASN 29 ? A ASN 29 30 1 Y 1 D PRO 30 ? A PRO 30 31 1 Y 1 D PRO 31 ? A PRO 31 32 1 Y 1 D THR 32 ? A THR 32 33 1 Y 1 D THR 33 ? A THR 33 34 1 Y 1 D ALA 34 ? A ALA 34 35 1 Y 1 D TYR 235 ? A TYR 235 36 1 Y 1 D GLY 236 ? A GLY 236 37 1 Y 1 D PRO 237 ? A PRO 237 38 1 Y 1 D ASP 238 ? A ASP 238 39 1 Y 1 D THR 239 ? A THR 239 40 1 Y 1 D PRO 240 ? A PRO 240 41 1 Y 1 D THR 241 ? A THR 241 42 1 Y 1 D ILE 242 ? A ILE 242 43 1 Y 1 D SER 243 ? A SER 243 44 1 Y 1 D PRO 244 ? A PRO 244 45 1 Y 1 D SER 245 ? A SER 245 46 1 Y 1 D ASP 246 ? A ASP 246 47 1 Y 1 D THR 247 ? A THR 247 48 1 Y 1 D TYR 248 ? A TYR 248 49 1 Y 1 D TYR 249 ? A TYR 249 50 1 Y 1 D ARG 250 ? A ARG 250 51 1 Y 1 D PRO 251 ? A PRO 251 52 1 Y 1 D GLY 252 ? A GLY 252 53 1 Y 1 D ALA 253 ? A ALA 253 54 1 Y 1 D ASN 254 ? A ASN 254 55 1 Y 1 D LEU 255 ? A LEU 255 56 1 Y 1 D SER 256 ? A SER 256 57 1 Y 1 D LEU 257 ? A LEU 257 58 1 Y 1 D SER 258 ? A SER 258 59 1 Y 1 D CYS 259 ? A CYS 259 60 1 Y 1 D TYR 260 ? A TYR 260 61 1 Y 1 D ALA 261 ? A ALA 261 62 1 Y 1 D ALA 262 ? A ALA 262 63 1 Y 1 D SER 263 ? A SER 263 64 1 Y 1 D ASN 264 ? A ASN 264 65 1 Y 1 D PRO 265 ? A PRO 265 66 1 Y 1 D PRO 266 ? A PRO 266 67 1 Y 1 D ALA 267 ? A ALA 267 68 1 Y 1 D GLN 268 ? A GLN 268 69 1 Y 1 D TYR 269 ? A TYR 269 70 1 Y 1 D SER 270 ? A SER 270 71 1 Y 1 D TRP 271 ? A TRP 271 72 1 Y 1 D LEU 272 ? A LEU 272 73 1 Y 1 D ILE 273 ? A ILE 273 74 1 Y 1 D ASN 274 ? A ASN 274 75 1 Y 1 D GLY 275 ? A GLY 275 76 1 Y 1 D THR 276 ? A THR 276 77 1 Y 1 D PHE 277 ? A PHE 277 78 1 Y 1 D GLN 278 ? A GLN 278 79 1 Y 1 D GLN 279 ? A GLN 279 80 1 Y 1 D SER 280 ? A SER 280 81 1 Y 1 D THR 281 ? A THR 281 82 1 Y 1 D GLN 282 ? A GLN 282 83 1 Y 1 D GLU 283 ? A GLU 283 84 1 Y 1 D LEU 284 ? A LEU 284 85 1 Y 1 D PHE 285 ? A PHE 285 86 1 Y 1 D ILE 286 ? A ILE 286 87 1 Y 1 D PRO 287 ? A PRO 287 88 1 Y 1 D ASN 288 ? A ASN 288 89 1 Y 1 D ILE 289 ? A ILE 289 90 1 Y 1 D THR 290 ? A THR 290 91 1 Y 1 D VAL 291 ? A VAL 291 92 1 Y 1 D ASN 292 ? A ASN 292 93 1 Y 1 D ASN 293 ? A ASN 293 94 1 Y 1 D SER 294 ? A SER 294 95 1 Y 1 D GLY 295 ? A GLY 295 96 1 Y 1 D SER 296 ? A SER 296 97 1 Y 1 D TYR 297 ? A TYR 297 98 1 Y 1 D THR 298 ? A THR 298 99 1 Y 1 D CYS 299 ? A CYS 299 100 1 Y 1 D HIS 300 ? A HIS 300 101 1 Y 1 D ALA 301 ? A ALA 301 102 1 Y 1 D ASN 302 ? A ASN 302 103 1 Y 1 D ASN 303 ? A ASN 303 104 1 Y 1 D SER 304 ? A SER 304 105 1 Y 1 D VAL 305 ? A VAL 305 106 1 Y 1 D THR 306 ? A THR 306 107 1 Y 1 D GLY 307 ? A GLY 307 108 1 Y 1 D CYS 308 ? A CYS 308 109 1 Y 1 D ASN 309 ? A ASN 309 110 1 Y 1 D ARG 310 ? A ARG 310 111 1 Y 1 D THR 311 ? A THR 311 112 1 Y 1 D THR 312 ? A THR 312 113 1 Y 1 D VAL 313 ? A VAL 313 114 1 Y 1 D LYS 314 ? A LYS 314 115 1 Y 1 D THR 315 ? A THR 315 116 1 Y 1 D ILE 316 ? A ILE 316 117 1 Y 1 D ILE 317 ? A ILE 317 118 1 Y 1 D VAL 318 ? A VAL 318 119 1 Y 1 D THR 319 ? A THR 319 120 1 Y 1 D GLU 320 ? A GLU 320 121 1 Y 1 D LEU 321 ? A LEU 321 122 1 Y 1 D SER 322 ? A SER 322 123 1 Y 1 D PRO 323 ? A PRO 323 124 1 Y 1 D VAL 324 ? A VAL 324 125 1 Y 1 D VAL 325 ? A VAL 325 126 1 Y 1 D ALA 326 ? A ALA 326 127 1 Y 1 D LYS 327 ? A LYS 327 128 1 Y 1 D PRO 328 ? A PRO 328 129 1 Y 1 D GLN 329 ? A GLN 329 130 1 Y 1 D ILE 330 ? A ILE 330 131 1 Y 1 D LYS 331 ? A LYS 331 132 1 Y 1 D ALA 332 ? A ALA 332 133 1 Y 1 D SER 333 ? A SER 333 134 1 Y 1 D LYS 334 ? A LYS 334 135 1 Y 1 D THR 335 ? A THR 335 136 1 Y 1 D THR 336 ? A THR 336 137 1 Y 1 D VAL 337 ? A VAL 337 138 1 Y 1 D THR 338 ? A THR 338 139 1 Y 1 D GLY 339 ? A GLY 339 140 1 Y 1 D ASP 340 ? A ASP 340 141 1 Y 1 D LYS 341 ? A LYS 341 142 1 Y 1 D ASP 342 ? A ASP 342 143 1 Y 1 D SER 343 ? A SER 343 144 1 Y 1 D VAL 344 ? A VAL 344 145 1 Y 1 D ASN 345 ? A ASN 345 146 1 Y 1 D LEU 346 ? A LEU 346 147 1 Y 1 D THR 347 ? A THR 347 148 1 Y 1 D CYS 348 ? A CYS 348 149 1 Y 1 D SER 349 ? A SER 349 150 1 Y 1 D THR 350 ? A THR 350 151 1 Y 1 D ASN 351 ? A ASN 351 152 1 Y 1 D ASP 352 ? A ASP 352 153 1 Y 1 D THR 353 ? A THR 353 154 1 Y 1 D GLY 354 ? A GLY 354 155 1 Y 1 D ILE 355 ? A ILE 355 156 1 Y 1 D SER 356 ? A SER 356 157 1 Y 1 D ILE 357 ? A ILE 357 158 1 Y 1 D ARG 358 ? A ARG 358 159 1 Y 1 D TRP 359 ? A TRP 359 160 1 Y 1 D PHE 360 ? A PHE 360 161 1 Y 1 D PHE 361 ? A PHE 361 162 1 Y 1 D LYS 362 ? A LYS 362 163 1 Y 1 D ASN 363 ? A ASN 363 164 1 Y 1 D GLN 364 ? A GLN 364 165 1 Y 1 D SER 365 ? A SER 365 166 1 Y 1 D LEU 366 ? A LEU 366 167 1 Y 1 D PRO 367 ? A PRO 367 168 1 Y 1 D SER 368 ? A SER 368 169 1 Y 1 D SER 369 ? A SER 369 170 1 Y 1 D GLU 370 ? A GLU 370 171 1 Y 1 D ARG 371 ? A ARG 371 172 1 Y 1 D MET 372 ? A MET 372 173 1 Y 1 D LYS 373 ? A LYS 373 174 1 Y 1 D LEU 374 ? A LEU 374 175 1 Y 1 D SER 375 ? A SER 375 176 1 Y 1 D GLN 376 ? A GLN 376 177 1 Y 1 D GLY 377 ? A GLY 377 178 1 Y 1 D ASN 378 ? A ASN 378 179 1 Y 1 D THR 379 ? A THR 379 180 1 Y 1 D THR 380 ? A THR 380 181 1 Y 1 D LEU 381 ? A LEU 381 182 1 Y 1 D SER 382 ? A SER 382 183 1 Y 1 D ILE 383 ? A ILE 383 184 1 Y 1 D ASN 384 ? A ASN 384 185 1 Y 1 D PRO 385 ? A PRO 385 186 1 Y 1 D VAL 386 ? A VAL 386 187 1 Y 1 D LYS 387 ? A LYS 387 188 1 Y 1 D ARG 388 ? A ARG 388 189 1 Y 1 D GLU 389 ? A GLU 389 190 1 Y 1 D ASP 390 ? A ASP 390 191 1 Y 1 D ALA 391 ? A ALA 391 192 1 Y 1 D GLY 392 ? A GLY 392 193 1 Y 1 D THR 393 ? A THR 393 194 1 Y 1 D TYR 394 ? A TYR 394 195 1 Y 1 D TRP 395 ? A TRP 395 196 1 Y 1 D CYS 396 ? A CYS 396 197 1 Y 1 D GLU 397 ? A GLU 397 198 1 Y 1 D VAL 398 ? A VAL 398 199 1 Y 1 D PHE 399 ? A PHE 399 200 1 Y 1 D ASN 400 ? A ASN 400 201 1 Y 1 D PRO 401 ? A PRO 401 202 1 Y 1 D ILE 402 ? A ILE 402 203 1 Y 1 D SER 403 ? A SER 403 204 1 Y 1 D LYS 404 ? A LYS 404 205 1 Y 1 D ASN 405 ? A ASN 405 206 1 Y 1 D GLN 406 ? A GLN 406 207 1 Y 1 D SER 407 ? A SER 407 208 1 Y 1 D ASP 408 ? A ASP 408 209 1 Y 1 D PRO 409 ? A PRO 409 210 1 Y 1 D ILE 410 ? A ILE 410 211 1 Y 1 D MET 411 ? A MET 411 212 1 Y 1 D LEU 412 ? A LEU 412 213 1 Y 1 D ASN 413 ? A ASN 413 214 1 Y 1 D VAL 414 ? A VAL 414 215 1 Y 1 D ASN 415 ? A ASN 415 216 1 Y 1 D TYR 416 ? A TYR 416 217 1 Y 1 D ASN 417 ? A ASN 417 218 1 Y 1 D ALA 418 ? A ALA 418 219 1 Y 1 D LEU 419 ? A LEU 419 220 1 Y 1 D PRO 420 ? A PRO 420 221 1 Y 1 D GLN 421 ? A GLN 421 222 1 Y 1 D GLU 422 ? A GLU 422 223 1 Y 1 D ASN 423 ? A ASN 423 224 1 Y 1 D GLY 424 ? A GLY 424 225 1 Y 1 D LEU 425 ? A LEU 425 226 1 Y 1 D SER 426 ? A SER 426 227 1 Y 1 D PRO 427 ? A PRO 427 228 1 Y 1 D GLY 428 ? A GLY 428 229 1 Y 1 D HIS 429 ? A HIS 429 230 1 Y 1 D HIS 430 ? A HIS 430 231 1 Y 1 D HIS 431 ? A HIS 431 232 1 Y 1 D HIS 432 ? A HIS 432 233 1 Y 1 D HIS 433 ? A HIS 433 234 1 Y 1 D HIS 434 ? A HIS 434 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-08-15 _em_admin.deposition_site PDBE _em_admin.entry_id 9GH6 _em_admin.last_update 2025-04-23 _em_admin.map_release_date 2025-04-02 _em_admin.title 'CEACAM1 (35-234), focused refinement in the complex with CbpF' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.35 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 52.8 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 6334 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1766853 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.4.0 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 2.12 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.4.0 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.21-5207 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.4.0 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.4.0 CLASSIFICATION ? 12 1 ? ? cryoSPARC 4.4.0 RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.4.0 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Leibniz Association' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9GH6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #