HEADER OXIDOREDUCTASE 06-SEP-24 9GP1 TITLE JUMONJI DOMAIN-CONTAINING PROTEIN 2A WITH CRYSTALLIZATION EPITOPE TITLE 2 MUTATIOS K330R:A334E COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 4A; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A, COMPND 5 JUMONJI DOMAIN-CONTAINING PROTEIN 2A,[HISTONE H3]-TRIMETHYL-L- COMPND 6 LYSINE(36) DEMETHYLASE 4A,[HISTONE H3]-TRIMETHYL-L-LYSINE(9) COMPND 7 DEMETHYLASE 4A; COMPND 8 EC: 1.14.11.66,1.14.11.69; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KDM4A, JHDM3A, JMJD2, JMJD2A, KIAA0677; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRYSTAL EPITOPES, JUMONJI DOMAIN, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.FAIRHEAD,C.STRAIN-DAMERELL,M.YE,S.R.MACKINNON,D.PINKAS,E.M.MACLEAN, AUTHOR 2 L.KOEKEMOER,D.DAMERELL,T.KROJER,C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA, AUTHOR 3 W.YUE,N.BURGESS-BROWN,B.MARSDEN,F.VON DELFT,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 1 16-OCT-24 9GP1 0 JRNL AUTH M.FAIRHEAD,C.STRAIN-DAMERELL,M.YE,S.R.MACKINNON,D.PINKAS, JRNL AUTH 2 E.M.MACLEAN,L.KOEKEMOER,D.DAMERELL,T.KROJER,W.YUE, JRNL AUTH 3 N.BURGESS-BROWN,B.MARSDEN,F.VON DELFT JRNL TITL A FAST, PARALLEL METHOD FOR EFFICIENTLY EXPLORING JRNL TITL 2 CRYSTALLIZATION BEHAVIOUR OF LARGE NUMBERS OF PROTEIN JRNL TITL 3 VARIANTS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.82) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 77788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.077 REMARK 3 FREE R VALUE TEST SET COUNT : 3949 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.21 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.27 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5353 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 317 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11115 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 537 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09800 REMARK 3 B22 (A**2) : -0.86200 REMARK 3 B33 (A**2) : 1.00600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.30300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.319 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.469 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11467 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15600 ; 1.757 ; 1.823 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1396 ; 7.015 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ; 7.302 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1765 ;15.300 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1634 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9076 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 5015 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7851 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 682 ; 0.205 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 10 ; 0.237 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5593 ; 4.814 ; 4.195 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6986 ; 6.938 ; 7.525 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5874 ; 5.491 ; 4.269 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 8614 ; 7.675 ; 7.738 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 6 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 9 A 354 NULL REMARK 3 1 B 9 B 354 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 2 A 9 A 354 NULL REMARK 3 2 C 9 C 354 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 3 A 9 A 354 NULL REMARK 3 3 D 9 D 354 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 4 B 9 B 355 NULL REMARK 3 4 C 9 C 355 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 5 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 5 B 9 B 354 NULL REMARK 3 5 D 9 D 354 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 6 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 6 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 6 C 9 C 354 NULL REMARK 3 6 D 9 D 354 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 9GP1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1292141345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77812 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 101.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 25% PEG3350, REMARK 280 0.1M BIS-TRIS PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.80000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 MET A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 GLU A 7 REMARK 465 THR A 8 REMARK 465 LYS A 356 REMARK 465 GLU A 357 REMARK 465 SER A 358 REMARK 465 GLU A 359 REMARK 465 LEU A 360 REMARK 465 SER B 1 REMARK 465 GLU B 357 REMARK 465 SER B 358 REMARK 465 GLU B 359 REMARK 465 LEU B 360 REMARK 465 SER C 1 REMARK 465 MET C 2 REMARK 465 ALA C 3 REMARK 465 SER C 4 REMARK 465 GLU C 5 REMARK 465 SER C 6 REMARK 465 GLU C 7 REMARK 465 THR C 8 REMARK 465 GLU C 357 REMARK 465 SER C 358 REMARK 465 GLU C 359 REMARK 465 LEU C 360 REMARK 465 SER D 2 REMARK 465 MET D 3 REMARK 465 ALA D 4 REMARK 465 SER D 5 REMARK 465 GLU D 6 REMARK 465 SER D 7 REMARK 465 THR D 8A REMARK 465 LYS D 356 REMARK 465 GLU D 357 REMARK 465 SER D 358 REMARK 465 GLU D 359 REMARK 465 LEU D 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 ARG A 26 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 30 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 ASP A 65 CG OD1 OD2 REMARK 470 ILE A 68 CG1 CG2 CD1 REMARK 470 THR A 94 OG1 CG2 REMARK 470 PHE A 98 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 ASP A 105 CG OD1 OD2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 TYR A 107 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 111 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 114 CD OE1 OE2 REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 ARG A 120 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ASN A 129 CG OD1 ND2 REMARK 470 VAL A 137 CG1 CG2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 HIS A 145 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 147 CG OD1 OD2 REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 225 CE NZ REMARK 470 GLN A 233 CG CD OE1 NE2 REMARK 470 LYS A 252 NZ REMARK 470 LYS A 311 CG CD CE NZ REMARK 470 ASP A 312 CG OD1 OD2 REMARK 470 MET A 313 CG SD CE REMARK 470 LYS A 315 CG CD CE NZ REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 VAL A 322 CG1 CG2 REMARK 470 ARG A 323 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 324 CG CD CE NZ REMARK 470 PHE A 325 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 326 CG CD OE1 NE2 REMARK 470 GLU A 328 CG CD OE1 OE2 REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 330 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 331 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 332 CG CD1 CD2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 GLU A 335 CG CD OE1 OE2 REMARK 470 LYS A 337 CG CD CE NZ REMARK 470 LYS B 52 CG CD CE NZ REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 ARG B 111 CD NE CZ NH1 NH2 REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 LYS B 163 CG CD CE NZ REMARK 470 ARG B 222 CD NE CZ NH1 NH2 REMARK 470 GLN B 233 CG CD OE1 NE2 REMARK 470 GLU B 236 CG CD OE1 OE2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 ASP B 312 CG OD1 OD2 REMARK 470 MET B 313 CG SD CE REMARK 470 LYS B 315 CG CD CE NZ REMARK 470 ARG B 331 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 332 CG CD1 CD2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 GLU B 335 CG CD OE1 OE2 REMARK 470 LYS B 337 CG CD CE NZ REMARK 470 LYS C 52 CG CD CE NZ REMARK 470 LYS C 91 CG CD CE NZ REMARK 470 ARG C 96 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 100 CG CD CE NZ REMARK 470 ARG C 111 CD NE CZ NH1 NH2 REMARK 470 GLU C 114 CD OE1 OE2 REMARK 470 LYS C 144 CG CD CE NZ REMARK 470 ARG C 155 NE CZ NH1 NH2 REMARK 470 LYS C 163 CG CD CE NZ REMARK 470 ARG C 295 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 311 CG CD CE NZ REMARK 470 ASP C 312 CG OD1 OD2 REMARK 470 MET C 313 CG SD CE REMARK 470 ASP C 319 CG OD1 OD2 REMARK 470 ARG C 323 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 331 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 334 CG CD CE NZ REMARK 470 GLU C 335 CG CD OE1 OE2 REMARK 470 LYS C 337 CG CD CE NZ REMARK 470 LYS C 356 CG CD CE NZ REMARK 470 ARG D 14 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 23 CG CD OE1 OE2 REMARK 470 LYS D 52 CG CD CE NZ REMARK 470 LYS D 55 CG CD CE NZ REMARK 470 ASP D 61 CG OD1 OD2 REMARK 470 LYS D 100 CG CD CE NZ REMARK 470 LYS D 163 CG CD CE NZ REMARK 470 LYS D 225 CE NZ REMARK 470 GLN D 233 CG CD OE1 NE2 REMARK 470 GLU D 236 CG CD OE1 OE2 REMARK 470 LYS D 311 CG CD CE NZ REMARK 470 ARG D 331 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 355 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER D 211 O HOH D 501 1.95 REMARK 500 O HOH C 584 O HOH C 604 1.96 REMARK 500 O HOH D 696 O HOH D 705 2.02 REMARK 500 CB LYS A 311 O GLY D 166 2.04 REMARK 500 OE1 GLN C 73 O HOH C 501 2.09 REMARK 500 O LYS C 356 O HOH C 502 2.12 REMARK 500 O HOH D 514 O HOH D 684 2.15 REMARK 500 O HOH D 554 O HOH D 636 2.17 REMARK 500 O HOH B 626 O HOH B 632 2.18 REMARK 500 O GLU D 236 O HOH D 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 639 O HOH D 634 2545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 75 CB - CG - CD2 ANGL. DEV. = -10.4 DEGREES REMARK 500 LEU B 82 CB - CG - CD2 ANGL. DEV. = -10.9 DEGREES REMARK 500 LYS B 121 CD - CE - NZ ANGL. DEV. = -15.2 DEGREES REMARK 500 LYS B 260 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG D 222 CG - CD - NE ANGL. DEV. = 13.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 62 23.74 -75.20 REMARK 500 ASP A 64 -31.69 150.86 REMARK 500 SER A 113 -72.47 -93.38 REMARK 500 ARG A 153 81.48 -163.36 REMARK 500 VAL A 172 -61.09 -103.66 REMARK 500 ASP A 338 -71.61 -55.53 REMARK 500 ASN A 339 4.87 87.46 REMARK 500 SER B 113 -70.92 -93.04 REMARK 500 ARG B 153 79.74 -161.56 REMARK 500 VAL B 172 -62.18 -102.45 REMARK 500 MET B 193 15.05 59.93 REMARK 500 ASP B 312 64.29 66.78 REMARK 500 SER C 113 -70.85 -93.37 REMARK 500 ARG C 153 82.36 -165.28 REMARK 500 VAL C 172 -61.29 -103.57 REMARK 500 LYS C 183 4.89 81.19 REMARK 500 ALA C 237 59.75 -150.15 REMARK 500 ASP C 312 63.87 67.90 REMARK 500 LEU D 9 101.92 55.48 REMARK 500 SER D 113 -70.61 -93.73 REMARK 500 ARG D 153 78.99 -164.22 REMARK 500 VAL D 172 -61.88 -104.34 REMARK 500 MET D 193 15.46 59.65 REMARK 500 ALA D 237 59.59 -147.66 REMARK 500 ASP D 312 63.55 69.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 219 0.11 SIDE CHAIN REMARK 500 ARG D 219 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 657 DISTANCE = 6.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 189 NE2 REMARK 620 2 GLU A 191 OE1 106.8 REMARK 620 3 HIS A 277 NE2 89.2 78.7 REMARK 620 4 HOH A 538 O 169.0 84.2 92.4 REMARK 620 5 HOH A 546 O 91.8 160.2 95.4 77.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 235 SG REMARK 620 2 HIS A 241 NE2 113.0 REMARK 620 3 CYS A 307 SG 121.8 111.3 REMARK 620 4 CYS A 309 SG 107.0 86.1 111.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 189 NE2 REMARK 620 2 GLU B 191 OE1 100.3 REMARK 620 3 HIS B 277 NE2 84.9 78.5 REMARK 620 4 HOH B 513 O 91.1 85.6 162.6 REMARK 620 5 HOH B 607 O 165.5 94.1 96.2 91.9 REMARK 620 6 HOH B 635 O 90.6 166.6 94.9 102.1 74.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 235 SG REMARK 620 2 HIS B 241 NE2 110.6 REMARK 620 3 CYS B 307 SG 121.8 115.9 REMARK 620 4 CYS B 309 SG 104.8 84.6 112.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 189 NE2 REMARK 620 2 GLU C 191 OE1 101.3 REMARK 620 3 HIS C 277 NE2 88.0 80.8 REMARK 620 4 HOH C 571 O 80.8 91.4 164.9 REMARK 620 5 HOH C 588 O 158.9 98.2 103.1 90.7 REMARK 620 6 HOH C 600 O 88.6 169.3 103.8 86.1 71.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 235 SG REMARK 620 2 HIS C 241 NE2 108.8 REMARK 620 3 CYS C 307 SG 118.4 119.3 REMARK 620 4 CYS C 309 SG 108.1 89.6 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI D 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 189 NE2 REMARK 620 2 GLU D 191 OE1 102.1 REMARK 620 3 HIS D 277 NE2 88.3 81.7 REMARK 620 4 HOH D 666 O 84.9 105.8 170.8 REMARK 620 5 HOH D 675 O 85.2 168.1 108.1 65.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 235 SG REMARK 620 2 HIS D 241 NE2 111.0 REMARK 620 3 CYS D 307 SG 116.9 114.2 REMARK 620 4 CYS D 309 SG 110.8 90.5 110.5 REMARK 620 N 1 2 3 DBREF 9GP1 A 2 360 UNP O75164 KDM4A_HUMAN 1 359 DBREF 9GP1 B 2 360 UNP O75164 KDM4A_HUMAN 1 359 DBREF 9GP1 C 2 360 UNP O75164 KDM4A_HUMAN 1 359 DBREF 9GP1 D 3 360 UNP O75164 KDM4A_HUMAN 1 359 SEQADV 9GP1 SER A 1 UNP O75164 EXPRESSION TAG SEQADV 9GP1 ARG A 331 UNP O75164 LYS 330 ENGINEERED MUTATION SEQADV 9GP1 GLU A 335 UNP O75164 ALA 334 ENGINEERED MUTATION SEQADV 9GP1 SER B 1 UNP O75164 EXPRESSION TAG SEQADV 9GP1 ARG B 331 UNP O75164 LYS 330 ENGINEERED MUTATION SEQADV 9GP1 GLU B 335 UNP O75164 ALA 334 ENGINEERED MUTATION SEQADV 9GP1 SER C 1 UNP O75164 EXPRESSION TAG SEQADV 9GP1 ARG C 331 UNP O75164 LYS 330 ENGINEERED MUTATION SEQADV 9GP1 GLU C 335 UNP O75164 ALA 334 ENGINEERED MUTATION SEQADV 9GP1 SER D 2 UNP O75164 EXPRESSION TAG SEQADV 9GP1 ARG D 331 UNP O75164 LYS 330 ENGINEERED MUTATION SEQADV 9GP1 GLU D 335 UNP O75164 ALA 334 ENGINEERED MUTATION SEQRES 1 A 360 SER MET ALA SER GLU SER GLU THR LEU ASN PRO SER ALA SEQRES 2 A 360 ARG ILE MET THR PHE TYR PRO THR MET GLU GLU PHE ARG SEQRES 3 A 360 ASN PHE SER ARG TYR ILE ALA TYR ILE GLU SER GLN GLY SEQRES 4 A 360 ALA HIS ARG ALA GLY LEU ALA LYS VAL VAL PRO PRO LYS SEQRES 5 A 360 GLU TRP LYS PRO ARG ALA SER TYR ASP ASP ILE ASP ASP SEQRES 6 A 360 LEU VAL ILE PRO ALA PRO ILE GLN GLN LEU VAL THR GLY SEQRES 7 A 360 GLN SER GLY LEU PHE THR GLN TYR ASN ILE GLN LYS LYS SEQRES 8 A 360 ALA MET THR VAL ARG GLU PHE ARG LYS ILE ALA ASN SER SEQRES 9 A 360 ASP LYS TYR CYS THR PRO ARG TYR SER GLU PHE GLU GLU SEQRES 10 A 360 LEU GLU ARG LYS TYR TRP LYS ASN LEU THR PHE ASN PRO SEQRES 11 A 360 PRO ILE TYR GLY ALA ASP VAL ASN GLY THR LEU TYR GLU SEQRES 12 A 360 LYS HIS VAL ASP GLU TRP ASN ILE GLY ARG LEU ARG THR SEQRES 13 A 360 ILE LEU ASP LEU VAL GLU LYS GLU SER GLY ILE THR ILE SEQRES 14 A 360 GLU GLY VAL ASN THR PRO TYR LEU TYR PHE GLY MET TRP SEQRES 15 A 360 LYS THR SER PHE ALA TRP HIS THR GLU ASP MET ASP LEU SEQRES 16 A 360 TYR SER ILE ASN TYR LEU HIS PHE GLY GLU PRO LYS SER SEQRES 17 A 360 TRP TYR SER VAL PRO PRO GLU HIS GLY LYS ARG LEU GLU SEQRES 18 A 360 ARG LEU ALA LYS GLY PHE PHE PRO GLY SER ALA GLN SER SEQRES 19 A 360 CYS GLU ALA PHE LEU ARG HIS LYS MET THR LEU ILE SER SEQRES 20 A 360 PRO LEU MET LEU LYS LYS TYR GLY ILE PRO PHE ASP LYS SEQRES 21 A 360 VAL THR GLN GLU ALA GLY GLU PHE MET ILE THR PHE PRO SEQRES 22 A 360 TYR GLY TYR HIS ALA GLY PHE ASN HIS GLY PHE ASN CYS SEQRES 23 A 360 ALA GLU SER THR ASN PHE ALA THR ARG ARG TRP ILE GLU SEQRES 24 A 360 TYR GLY LYS GLN ALA VAL LEU CYS SER CYS ARG LYS ASP SEQRES 25 A 360 MET VAL LYS ILE SER MET ASP VAL PHE VAL ARG LYS PHE SEQRES 26 A 360 GLN PRO GLU ARG TYR ARG LEU TRP LYS GLU GLY LYS ASP SEQRES 27 A 360 ASN THR VAL ILE ASP HIS THR LEU PRO THR PRO GLU ALA SEQRES 28 A 360 ALA GLU PHE LEU LYS GLU SER GLU LEU SEQRES 1 B 360 SER MET ALA SER GLU SER GLU THR LEU ASN PRO SER ALA SEQRES 2 B 360 ARG ILE MET THR PHE TYR PRO THR MET GLU GLU PHE ARG SEQRES 3 B 360 ASN PHE SER ARG TYR ILE ALA TYR ILE GLU SER GLN GLY SEQRES 4 B 360 ALA HIS ARG ALA GLY LEU ALA LYS VAL VAL PRO PRO LYS SEQRES 5 B 360 GLU TRP LYS PRO ARG ALA SER TYR ASP ASP ILE ASP ASP SEQRES 6 B 360 LEU VAL ILE PRO ALA PRO ILE GLN GLN LEU VAL THR GLY SEQRES 7 B 360 GLN SER GLY LEU PHE THR GLN TYR ASN ILE GLN LYS LYS SEQRES 8 B 360 ALA MET THR VAL ARG GLU PHE ARG LYS ILE ALA ASN SER SEQRES 9 B 360 ASP LYS TYR CYS THR PRO ARG TYR SER GLU PHE GLU GLU SEQRES 10 B 360 LEU GLU ARG LYS TYR TRP LYS ASN LEU THR PHE ASN PRO SEQRES 11 B 360 PRO ILE TYR GLY ALA ASP VAL ASN GLY THR LEU TYR GLU SEQRES 12 B 360 LYS HIS VAL ASP GLU TRP ASN ILE GLY ARG LEU ARG THR SEQRES 13 B 360 ILE LEU ASP LEU VAL GLU LYS GLU SER GLY ILE THR ILE SEQRES 14 B 360 GLU GLY VAL ASN THR PRO TYR LEU TYR PHE GLY MET TRP SEQRES 15 B 360 LYS THR SER PHE ALA TRP HIS THR GLU ASP MET ASP LEU SEQRES 16 B 360 TYR SER ILE ASN TYR LEU HIS PHE GLY GLU PRO LYS SER SEQRES 17 B 360 TRP TYR SER VAL PRO PRO GLU HIS GLY LYS ARG LEU GLU SEQRES 18 B 360 ARG LEU ALA LYS GLY PHE PHE PRO GLY SER ALA GLN SER SEQRES 19 B 360 CYS GLU ALA PHE LEU ARG HIS LYS MET THR LEU ILE SER SEQRES 20 B 360 PRO LEU MET LEU LYS LYS TYR GLY ILE PRO PHE ASP LYS SEQRES 21 B 360 VAL THR GLN GLU ALA GLY GLU PHE MET ILE THR PHE PRO SEQRES 22 B 360 TYR GLY TYR HIS ALA GLY PHE ASN HIS GLY PHE ASN CYS SEQRES 23 B 360 ALA GLU SER THR ASN PHE ALA THR ARG ARG TRP ILE GLU SEQRES 24 B 360 TYR GLY LYS GLN ALA VAL LEU CYS SER CYS ARG LYS ASP SEQRES 25 B 360 MET VAL LYS ILE SER MET ASP VAL PHE VAL ARG LYS PHE SEQRES 26 B 360 GLN PRO GLU ARG TYR ARG LEU TRP LYS GLU GLY LYS ASP SEQRES 27 B 360 ASN THR VAL ILE ASP HIS THR LEU PRO THR PRO GLU ALA SEQRES 28 B 360 ALA GLU PHE LEU LYS GLU SER GLU LEU SEQRES 1 C 360 SER MET ALA SER GLU SER GLU THR LEU ASN PRO SER ALA SEQRES 2 C 360 ARG ILE MET THR PHE TYR PRO THR MET GLU GLU PHE ARG SEQRES 3 C 360 ASN PHE SER ARG TYR ILE ALA TYR ILE GLU SER GLN GLY SEQRES 4 C 360 ALA HIS ARG ALA GLY LEU ALA LYS VAL VAL PRO PRO LYS SEQRES 5 C 360 GLU TRP LYS PRO ARG ALA SER TYR ASP ASP ILE ASP ASP SEQRES 6 C 360 LEU VAL ILE PRO ALA PRO ILE GLN GLN LEU VAL THR GLY SEQRES 7 C 360 GLN SER GLY LEU PHE THR GLN TYR ASN ILE GLN LYS LYS SEQRES 8 C 360 ALA MET THR VAL ARG GLU PHE ARG LYS ILE ALA ASN SER SEQRES 9 C 360 ASP LYS TYR CYS THR PRO ARG TYR SER GLU PHE GLU GLU SEQRES 10 C 360 LEU GLU ARG LYS TYR TRP LYS ASN LEU THR PHE ASN PRO SEQRES 11 C 360 PRO ILE TYR GLY ALA ASP VAL ASN GLY THR LEU TYR GLU SEQRES 12 C 360 LYS HIS VAL ASP GLU TRP ASN ILE GLY ARG LEU ARG THR SEQRES 13 C 360 ILE LEU ASP LEU VAL GLU LYS GLU SER GLY ILE THR ILE SEQRES 14 C 360 GLU GLY VAL ASN THR PRO TYR LEU TYR PHE GLY MET TRP SEQRES 15 C 360 LYS THR SER PHE ALA TRP HIS THR GLU ASP MET ASP LEU SEQRES 16 C 360 TYR SER ILE ASN TYR LEU HIS PHE GLY GLU PRO LYS SER SEQRES 17 C 360 TRP TYR SER VAL PRO PRO GLU HIS GLY LYS ARG LEU GLU SEQRES 18 C 360 ARG LEU ALA LYS GLY PHE PHE PRO GLY SER ALA GLN SER SEQRES 19 C 360 CYS GLU ALA PHE LEU ARG HIS LYS MET THR LEU ILE SER SEQRES 20 C 360 PRO LEU MET LEU LYS LYS TYR GLY ILE PRO PHE ASP LYS SEQRES 21 C 360 VAL THR GLN GLU ALA GLY GLU PHE MET ILE THR PHE PRO SEQRES 22 C 360 TYR GLY TYR HIS ALA GLY PHE ASN HIS GLY PHE ASN CYS SEQRES 23 C 360 ALA GLU SER THR ASN PHE ALA THR ARG ARG TRP ILE GLU SEQRES 24 C 360 TYR GLY LYS GLN ALA VAL LEU CYS SER CYS ARG LYS ASP SEQRES 25 C 360 MET VAL LYS ILE SER MET ASP VAL PHE VAL ARG LYS PHE SEQRES 26 C 360 GLN PRO GLU ARG TYR ARG LEU TRP LYS GLU GLY LYS ASP SEQRES 27 C 360 ASN THR VAL ILE ASP HIS THR LEU PRO THR PRO GLU ALA SEQRES 28 C 360 ALA GLU PHE LEU LYS GLU SER GLU LEU SEQRES 1 D 360 SER MET ALA SER GLU SER GLU THR LEU ASN PRO SER ALA SEQRES 2 D 360 ARG ILE MET THR PHE TYR PRO THR MET GLU GLU PHE ARG SEQRES 3 D 360 ASN PHE SER ARG TYR ILE ALA TYR ILE GLU SER GLN GLY SEQRES 4 D 360 ALA HIS ARG ALA GLY LEU ALA LYS VAL VAL PRO PRO LYS SEQRES 5 D 360 GLU TRP LYS PRO ARG ALA SER TYR ASP ASP ILE ASP ASP SEQRES 6 D 360 LEU VAL ILE PRO ALA PRO ILE GLN GLN LEU VAL THR GLY SEQRES 7 D 360 GLN SER GLY LEU PHE THR GLN TYR ASN ILE GLN LYS LYS SEQRES 8 D 360 ALA MET THR VAL ARG GLU PHE ARG LYS ILE ALA ASN SER SEQRES 9 D 360 ASP LYS TYR CYS THR PRO ARG TYR SER GLU PHE GLU GLU SEQRES 10 D 360 LEU GLU ARG LYS TYR TRP LYS ASN LEU THR PHE ASN PRO SEQRES 11 D 360 PRO ILE TYR GLY ALA ASP VAL ASN GLY THR LEU TYR GLU SEQRES 12 D 360 LYS HIS VAL ASP GLU TRP ASN ILE GLY ARG LEU ARG THR SEQRES 13 D 360 ILE LEU ASP LEU VAL GLU LYS GLU SER GLY ILE THR ILE SEQRES 14 D 360 GLU GLY VAL ASN THR PRO TYR LEU TYR PHE GLY MET TRP SEQRES 15 D 360 LYS THR SER PHE ALA TRP HIS THR GLU ASP MET ASP LEU SEQRES 16 D 360 TYR SER ILE ASN TYR LEU HIS PHE GLY GLU PRO LYS SER SEQRES 17 D 360 TRP TYR SER VAL PRO PRO GLU HIS GLY LYS ARG LEU GLU SEQRES 18 D 360 ARG LEU ALA LYS GLY PHE PHE PRO GLY SER ALA GLN SER SEQRES 19 D 360 CYS GLU ALA PHE LEU ARG HIS LYS MET THR LEU ILE SER SEQRES 20 D 360 PRO LEU MET LEU LYS LYS TYR GLY ILE PRO PHE ASP LYS SEQRES 21 D 360 VAL THR GLN GLU ALA GLY GLU PHE MET ILE THR PHE PRO SEQRES 22 D 360 TYR GLY TYR HIS ALA GLY PHE ASN HIS GLY PHE ASN CYS SEQRES 23 D 360 ALA GLU SER THR ASN PHE ALA THR ARG ARG TRP ILE GLU SEQRES 24 D 360 TYR GLY LYS GLN ALA VAL LEU CYS SER CYS ARG LYS ASP SEQRES 25 D 360 MET VAL LYS ILE SER MET ASP VAL PHE VAL ARG LYS PHE SEQRES 26 D 360 GLN PRO GLU ARG TYR ARG LEU TRP LYS GLU GLY LYS ASP SEQRES 27 D 360 ASN THR VAL ILE ASP HIS THR LEU PRO THR PRO GLU ALA SEQRES 28 D 360 ALA GLU PHE LEU LYS GLU SER GLU LEU HET NI A 401 1 HET ZN A 402 1 HET NI B 401 1 HET ZN B 402 1 HET NI C 401 1 HET ZN C 402 1 HET NI D 401 1 HET ZN D 402 1 HETNAM NI NICKEL (II) ION HETNAM ZN ZINC ION FORMUL 5 NI 4(NI 2+) FORMUL 6 ZN 4(ZN 2+) FORMUL 13 HOH *537(H2 O) HELIX 1 AA1 THR A 21 ARG A 26 1 6 HELIX 2 AA2 ASN A 27 GLN A 38 1 12 HELIX 3 AA3 GLY A 39 ALA A 43 5 5 HELIX 4 AA4 VAL A 95 SER A 104 1 10 HELIX 5 AA5 GLU A 114 LEU A 126 1 13 HELIX 6 AA6 THR A 156 LEU A 158 5 3 HELIX 7 AA7 ASP A 159 SER A 165 1 7 HELIX 8 AA8 GLU A 191 LEU A 195 5 5 HELIX 9 AA9 PRO A 213 GLU A 215 5 3 HELIX 10 AB1 HIS A 216 PHE A 228 1 13 HELIX 11 AB2 PHE A 228 CYS A 235 1 8 HELIX 12 AB3 ALA A 237 LYS A 242 5 6 HELIX 13 AB4 SER A 247 TYR A 254 1 8 HELIX 14 AB5 ARG A 296 ALA A 304 1 9 HELIX 15 AB6 MET A 318 GLN A 326 1 9 HELIX 16 AB7 ARG A 329 GLU A 335 1 7 HELIX 17 AB8 THR A 348 LEU A 355 5 8 HELIX 18 AB9 SER B 4 LEU B 9 1 6 HELIX 19 AC1 THR B 21 ARG B 26 1 6 HELIX 20 AC2 ASN B 27 GLN B 38 1 12 HELIX 21 AC3 GLY B 39 ALA B 43 5 5 HELIX 22 AC4 ASP B 62 ASP B 65 5 4 HELIX 23 AC5 VAL B 95 SER B 104 1 10 HELIX 24 AC6 GLU B 114 LEU B 126 1 13 HELIX 25 AC7 THR B 156 LEU B 158 5 3 HELIX 26 AC8 ASP B 159 GLY B 166 1 8 HELIX 27 AC9 GLU B 191 LEU B 195 5 5 HELIX 28 AD1 PRO B 213 GLU B 215 5 3 HELIX 29 AD2 HIS B 216 PHE B 228 1 13 HELIX 30 AD3 PHE B 228 CYS B 235 1 8 HELIX 31 AD4 ALA B 237 LYS B 242 5 6 HELIX 32 AD5 SER B 247 TYR B 254 1 8 HELIX 33 AD6 ARG B 296 ALA B 304 1 9 HELIX 34 AD7 MET B 318 GLN B 326 1 9 HELIX 35 AD8 ARG B 329 GLU B 335 1 7 HELIX 36 AD9 THR B 348 GLU B 350 5 3 HELIX 37 AE1 ALA B 351 LYS B 356 1 6 HELIX 38 AE2 THR C 21 ARG C 26 1 6 HELIX 39 AE3 ASN C 27 GLN C 38 1 12 HELIX 40 AE4 GLY C 39 ALA C 43 5 5 HELIX 41 AE5 VAL C 95 SER C 104 1 10 HELIX 42 AE6 GLU C 114 LEU C 126 1 13 HELIX 43 AE7 THR C 156 LEU C 158 5 3 HELIX 44 AE8 ASP C 159 SER C 165 1 7 HELIX 45 AE9 GLU C 191 LEU C 195 5 5 HELIX 46 AF1 PRO C 213 GLU C 215 5 3 HELIX 47 AF2 HIS C 216 PHE C 228 1 13 HELIX 48 AF3 PHE C 228 CYS C 235 1 8 HELIX 49 AF4 ALA C 237 LYS C 242 5 6 HELIX 50 AF5 SER C 247 TYR C 254 1 8 HELIX 51 AF6 ARG C 296 ALA C 304 1 9 HELIX 52 AF7 MET C 318 GLN C 326 1 9 HELIX 53 AF8 ARG C 329 GLU C 335 1 7 HELIX 54 AF9 THR C 348 GLU C 350 5 3 HELIX 55 AG1 ALA C 351 LYS C 356 1 6 HELIX 56 AG2 THR D 21 ARG D 26 1 6 HELIX 57 AG3 ASN D 27 GLN D 38 1 12 HELIX 58 AG4 GLY D 39 ALA D 43 5 5 HELIX 59 AG5 VAL D 95 SER D 104 1 10 HELIX 60 AG6 GLU D 114 LEU D 126 1 13 HELIX 61 AG7 LEU D 158 SER D 165 1 8 HELIX 62 AG8 GLU D 191 LEU D 195 5 5 HELIX 63 AG9 PRO D 213 GLU D 215 5 3 HELIX 64 AH1 HIS D 216 PHE D 228 1 13 HELIX 65 AH2 PHE D 228 CYS D 235 1 8 HELIX 66 AH3 ALA D 237 LYS D 242 5 6 HELIX 67 AH4 SER D 247 TYR D 254 1 8 HELIX 68 AH5 ARG D 296 ALA D 304 1 9 HELIX 69 AH6 MET D 318 GLN D 326 1 9 HELIX 70 AH7 ARG D 329 GLU D 335 1 7 HELIX 71 AH8 THR D 348 LEU D 355 5 8 SHEET 1 AA110 MET A 16 PHE A 18 0 SHEET 2 AA110 LEU A 45 VAL A 48 1 O LYS A 47 N MET A 16 SHEET 3 AA110 PHE A 268 THR A 271 -1 O ILE A 270 N ALA A 46 SHEET 4 AA110 TYR A 196 GLY A 204 -1 N ASN A 199 O MET A 269 SHEET 5 AA110 ASN A 285 PHE A 292 -1 O GLU A 288 N TYR A 200 SHEET 6 AA110 TYR A 176 GLY A 180 -1 N TYR A 176 O SER A 289 SHEET 7 AA110 ILE A 132 ASN A 138 -1 N GLY A 134 O PHE A 179 SHEET 8 AA110 ILE A 72 GLN A 79 -1 N ILE A 72 O TYR A 133 SHEET 9 AA110 LEU A 82 GLN A 89 -1 O TYR A 86 N LEU A 75 SHEET 10 AA110 THR A 244 ILE A 246 -1 O LEU A 245 N PHE A 83 SHEET 1 AA2 2 VAL A 67 ILE A 68 0 SHEET 2 AA2 2 MET A 93 THR A 94 -1 O MET A 93 N ILE A 68 SHEET 1 AA3 4 SER A 185 HIS A 189 0 SHEET 2 AA3 4 TYR A 276 ASN A 281 -1 O GLY A 279 N PHE A 186 SHEET 3 AA3 4 LYS A 207 VAL A 212 -1 N SER A 208 O PHE A 280 SHEET 4 AA3 4 ASP A 259 GLN A 263 -1 O GLN A 263 N LYS A 207 SHEET 1 AA410 THR B 17 PHE B 18 0 SHEET 2 AA410 LEU B 45 VAL B 48 1 O LYS B 47 N PHE B 18 SHEET 3 AA410 PHE B 268 THR B 271 -1 O ILE B 270 N ALA B 46 SHEET 4 AA410 TYR B 196 GLY B 204 -1 N ASN B 199 O MET B 269 SHEET 5 AA410 ASN B 285 PHE B 292 -1 O GLU B 288 N TYR B 200 SHEET 6 AA410 TYR B 176 GLY B 180 -1 N TYR B 176 O SER B 289 SHEET 7 AA410 ILE B 132 ASN B 138 -1 N VAL B 137 O LEU B 177 SHEET 8 AA410 ILE B 72 GLN B 79 -1 N ILE B 72 O TYR B 133 SHEET 9 AA410 LEU B 82 GLN B 89 -1 O TYR B 86 N LEU B 75 SHEET 10 AA410 THR B 244 ILE B 246 -1 O LEU B 245 N PHE B 83 SHEET 1 AA5 2 VAL B 67 ILE B 68 0 SHEET 2 AA5 2 MET B 93 THR B 94 -1 O MET B 93 N ILE B 68 SHEET 1 AA6 4 SER B 185 HIS B 189 0 SHEET 2 AA6 4 TYR B 276 ASN B 281 -1 O GLY B 279 N PHE B 186 SHEET 3 AA6 4 LYS B 207 VAL B 212 -1 N SER B 208 O PHE B 280 SHEET 4 AA6 4 ASP B 259 GLN B 263 -1 O GLN B 263 N LYS B 207 SHEET 1 AA710 THR C 17 PHE C 18 0 SHEET 2 AA710 LEU C 45 VAL C 48 1 O LYS C 47 N PHE C 18 SHEET 3 AA710 PHE C 268 THR C 271 -1 O ILE C 270 N ALA C 46 SHEET 4 AA710 TYR C 196 GLY C 204 -1 N ASN C 199 O MET C 269 SHEET 5 AA710 ASN C 285 PHE C 292 -1 O GLU C 288 N TYR C 200 SHEET 6 AA710 TYR C 176 GLY C 180 -1 N TYR C 176 O SER C 289 SHEET 7 AA710 ILE C 132 ASN C 138 -1 N GLY C 134 O PHE C 179 SHEET 8 AA710 ILE C 72 GLN C 79 -1 N ILE C 72 O TYR C 133 SHEET 9 AA710 LEU C 82 GLN C 89 -1 O TYR C 86 N LEU C 75 SHEET 10 AA710 THR C 244 ILE C 246 -1 O LEU C 245 N PHE C 83 SHEET 1 AA8 2 VAL C 67 ILE C 68 0 SHEET 2 AA8 2 MET C 93 THR C 94 -1 O MET C 93 N ILE C 68 SHEET 1 AA9 4 SER C 185 HIS C 189 0 SHEET 2 AA9 4 TYR C 276 ASN C 281 -1 O GLY C 279 N PHE C 186 SHEET 3 AA9 4 LYS C 207 VAL C 212 -1 N SER C 208 O PHE C 280 SHEET 4 AA9 4 ASP C 259 GLN C 263 -1 O GLN C 263 N LYS C 207 SHEET 1 AB110 THR D 17 PHE D 18 0 SHEET 2 AB110 LEU D 45 VAL D 48 1 O LYS D 47 N PHE D 18 SHEET 3 AB110 PHE D 268 THR D 271 -1 O ILE D 270 N ALA D 46 SHEET 4 AB110 TYR D 196 GLY D 204 -1 N ASN D 199 O MET D 269 SHEET 5 AB110 ASN D 285 PHE D 292 -1 O GLU D 288 N TYR D 200 SHEET 6 AB110 TYR D 176 GLY D 180 -1 N TYR D 176 O SER D 289 SHEET 7 AB110 ILE D 132 ASN D 138 -1 N VAL D 137 O LEU D 177 SHEET 8 AB110 ILE D 72 GLN D 79 -1 N ILE D 72 O TYR D 133 SHEET 9 AB110 LEU D 82 GLN D 89 -1 O TYR D 86 N LEU D 75 SHEET 10 AB110 THR D 244 ILE D 246 -1 O LEU D 245 N PHE D 83 SHEET 1 AB2 2 VAL D 67 ILE D 68 0 SHEET 2 AB2 2 MET D 93 THR D 94 -1 O MET D 93 N ILE D 68 SHEET 1 AB3 4 SER D 185 HIS D 189 0 SHEET 2 AB3 4 TYR D 276 ASN D 281 -1 O GLY D 279 N PHE D 186 SHEET 3 AB3 4 LYS D 207 VAL D 212 -1 N SER D 208 O PHE D 280 SHEET 4 AB3 4 ASP D 259 GLN D 263 -1 O GLN D 263 N LYS D 207 LINK NE2 HIS A 189 NI NI A 401 1555 1555 2.11 LINK OE1 GLU A 191 NI NI A 401 1555 1555 2.21 LINK SG CYS A 235 ZN ZN A 402 1555 1555 2.19 LINK NE2 HIS A 241 ZN ZN A 402 1555 1555 2.16 LINK NE2 HIS A 277 NI NI A 401 1555 1555 2.36 LINK SG CYS A 307 ZN ZN A 402 1555 1555 2.15 LINK SG CYS A 309 ZN ZN A 402 1555 1555 2.54 LINK NI NI A 401 O HOH A 538 1555 1555 2.17 LINK NI NI A 401 O HOH A 546 1555 1555 2.12 LINK NE2 HIS B 189 NI NI B 401 1555 1555 2.30 LINK OE1 GLU B 191 NI NI B 401 1555 1555 2.22 LINK SG CYS B 235 ZN ZN B 402 1555 1555 2.24 LINK NE2 HIS B 241 ZN ZN B 402 1555 1555 2.15 LINK NE2 HIS B 277 NI NI B 401 1555 1555 2.35 LINK SG CYS B 307 ZN ZN B 402 1555 1555 2.03 LINK SG CYS B 309 ZN ZN B 402 1555 1555 2.59 LINK NI NI B 401 O HOH B 513 1555 1555 2.30 LINK NI NI B 401 O HOH B 607 1555 1555 2.08 LINK NI NI B 401 O HOH B 635 1555 1555 2.43 LINK NE2 HIS C 189 NI NI C 401 1555 1555 2.28 LINK OE1 GLU C 191 NI NI C 401 1555 1555 2.22 LINK SG CYS C 235 ZN ZN C 402 1555 1555 2.35 LINK NE2 HIS C 241 ZN ZN C 402 1555 1555 2.06 LINK NE2 HIS C 277 NI NI C 401 1555 1555 2.25 LINK SG CYS C 307 ZN ZN C 402 1555 1555 2.09 LINK SG CYS C 309 ZN ZN C 402 1555 1555 2.45 LINK NI NI C 401 O HOH C 571 1555 1555 2.31 LINK NI NI C 401 O HOH C 588 1555 1555 2.60 LINK NI NI C 401 O HOH C 600 1555 1555 2.35 LINK NE2 HIS D 189 NI NI D 401 1555 1555 2.27 LINK OE1 GLU D 191 NI NI D 401 1555 1555 2.17 LINK SG CYS D 235 ZN ZN D 402 1555 1555 2.30 LINK NE2 HIS D 241 ZN ZN D 402 1555 1555 2.08 LINK NE2 HIS D 277 NI NI D 401 1555 1555 2.26 LINK SG CYS D 307 ZN ZN D 402 1555 1555 2.22 LINK SG CYS D 309 ZN ZN D 402 1555 1555 2.38 LINK NI NI D 401 O HOH D 666 1555 1555 2.29 LINK NI NI D 401 O HOH D 675 1555 1555 2.56 CRYST1 57.030 101.600 141.430 90.00 99.38 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017535 0.000000 0.002897 0.00000 SCALE2 0.000000 0.009843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007166 0.00000