HEADER TRANSCRIPTION 04-OCT-24 9GZO TITLE CRYO-EM STRUCTURE OF THE HUMAN MITOCHONDRIAL RNA POLYMERASE TITLE 2 TRANSCRIPTION INITIATION COMPLEX (POLRMT/TFB2M/DNA/RNA) WITHOUT TFAM; TITLE 3 AND WITH A SLIPPED 3-MER RNA, PPPGPGPA (SLIPPED IC3-TFAM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MTRPOL; COMPND 5 EC: 2.7.7.6; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-TEMPLATE STRAND DNA (56-MER); COMPND 9 CHAIN: N; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TEMPLATE STRAND DNA (56-MER); COMPND 13 CHAIN: T; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DIMETHYLADENOSINE TRANSFERASE 2, MITOCHONDRIAL; COMPND 17 CHAIN: B; COMPND 18 SYNONYM: HEPATITIS C VIRUS NS5A-TRANSACTIVATED PROTEIN 5,HCV NS5A- COMPND 19 TRANSACTIVATED PROTEIN 5,MITOCHONDRIAL 12S RRNA DIMETHYLASE 2, COMPND 20 MITOCHONDRIAL TRANSCRIPTION FACTOR B2,H-MTTFB,H-MTTFB2,HTFB2M,MTTFB2, COMPND 21 S-ADENOSYLMETHIONINE-6-N',N'-ADENOSYL(RRNA) DIMETHYLTRANSFERASE 2; COMPND 22 EC: 2.1.1.-; COMPND 23 ENGINEERED: YES; COMPND 24 MOL_ID: 5; COMPND 25 MOLECULE: RNA (5'-D(*(GTP))-R(P*GP*A)-3'); COMPND 26 CHAIN: R; COMPND 27 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLRMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEXHTB; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 GENE: TFB2M, NS5ATP5; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 26 EXPRESSION_SYSTEM_VARIANT: ARCTICEXPRESS; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PT7TEV-HMBP4; SOURCE 29 MOL_ID: 5; SOURCE 30 SYNTHETIC: YES; SOURCE 31 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 32 ORGANISM_TAXID: 32630 KEYWDS POLRMT, TFB2M, TFAM, TRANSCRIPTION INITIATION, POLYMERASE, H-MTRNAP, KEYWDS 2 MTRNAP, RNA POLYMERASE, MITOCHONDRIAL DNA, MITOCHONDRIA, SLIPPAGE, KEYWDS 3 TRANSCRIPTION EXPDTA ELECTRON MICROSCOPY AUTHOR Q.GOOVAERTS,J.SHEN,Y.AJJUGAL,B.DE WIJNGAERT,S.S.PATEL,K.DAS REVDAT 3 03-SEP-25 9GZO 1 JRNL REVDAT 2 06-AUG-25 9GZO 1 JRNL REVDAT 1 30-JUL-25 9GZO 0 JRNL AUTH J.SHEN,Q.GOOVAERTS,Y.AJJUGAL,B.DE WIJNGAERT,K.DAS,S.S.PATEL JRNL TITL HUMAN MITOCHONDRIAL RNA POLYMERASE STRUCTURES REVEAL JRNL TITL 2 TRANSCRIPTION START SITE AND SLIPPAGE MECHANISM. JRNL REF MOL.CELL V. 85 3137 2025 JRNL REFN ISSN 1097-2765 JRNL PMID 40712586 JRNL DOI 10.1016/J.MOLCEL.2025.07.002 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, COOT, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 72.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.150 REMARK 3 NUMBER OF PARTICLES : 277033 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9GZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1292141787. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF THE HUMAN REMARK 245 MITOCHONDRIAL RNA POLYMERASE REMARK 245 TRANSCRIPTION INITIATION REMARK 245 COMPLEX (POLRMT/TFB2M/DNA/RNA) REMARK 245 WITHOUT TFAM; AND WITH A REMARK 245 SLIPPED 3-MER RNA, PPPGPGPA REMARK 245 (SLIPPED IC3-TFAM); DNA- REMARK 245 DIRECTED RNA POLYMERASE, REMARK 245 MITOCHONDRIAL; DNA (56-MER); REMARK 245 DIMETHYLADENOSINE TRANSFERASE 2, REMARK 245 MITOCHONDRIAL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.30 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : INCUBATED ON THE GRID FOR 10 REMARK 245 SECONDS PRIOR TO BACK-BLOTTING REMARK 245 FOR 12 SECONDS REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 150000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, N, T, B, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 PRO A 46 REMARK 465 GLN A 47 REMARK 465 GLU A 48 REMARK 465 GLN A 49 REMARK 465 ASP A 50 REMARK 465 GLN A 51 REMARK 465 ASP A 52 REMARK 465 ARG A 53 REMARK 465 ARG A 54 REMARK 465 LYS A 55 REMARK 465 ASP A 56 REMARK 465 TRP A 57 REMARK 465 GLY A 58 REMARK 465 HIS A 59 REMARK 465 VAL A 60 REMARK 465 GLU A 61 REMARK 465 LEU A 62 REMARK 465 LEU A 63 REMARK 465 GLU A 64 REMARK 465 VAL A 65 REMARK 465 LEU A 66 REMARK 465 GLN A 67 REMARK 465 ALA A 68 REMARK 465 ARG A 69 REMARK 465 VAL A 70 REMARK 465 ARG A 71 REMARK 465 GLN A 72 REMARK 465 LEU A 73 REMARK 465 GLN A 74 REMARK 465 ALA A 75 REMARK 465 GLU A 76 REMARK 465 SER A 77 REMARK 465 VAL A 78 REMARK 465 SER A 79 REMARK 465 GLU A 80 REMARK 465 VAL A 81 REMARK 465 VAL A 82 REMARK 465 VAL A 83 REMARK 465 ASN A 84 REMARK 465 ARG A 85 REMARK 465 VAL A 86 REMARK 465 ASP A 87 REMARK 465 VAL A 88 REMARK 465 ALA A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 PRO A 92 REMARK 465 GLU A 93 REMARK 465 CYS A 94 REMARK 465 GLY A 95 REMARK 465 SER A 96 REMARK 465 GLY A 97 REMARK 465 ASP A 98 REMARK 465 GLY A 99 REMARK 465 SER A 100 REMARK 465 LEU A 101 REMARK 465 GLN A 102 REMARK 465 PRO A 103 REMARK 465 PRO A 104 REMARK 465 ARG A 105 REMARK 465 LYS A 106 REMARK 465 VAL A 107 REMARK 465 GLN A 108 REMARK 465 MET A 109 REMARK 465 GLY A 110 REMARK 465 ALA A 111 REMARK 465 LYS A 112 REMARK 465 ASP A 113 REMARK 465 ALA A 114 REMARK 465 THR A 115 REMARK 465 PRO A 116 REMARK 465 VAL A 117 REMARK 465 PRO A 118 REMARK 465 CYS A 119 REMARK 465 GLY A 120 REMARK 465 ARG A 121 REMARK 465 TRP A 122 REMARK 465 ALA A 123 REMARK 465 LYS A 124 REMARK 465 ILE A 125 REMARK 465 LEU A 126 REMARK 465 GLU A 127 REMARK 465 LYS A 128 REMARK 465 ASP A 129 REMARK 465 LYS A 130 REMARK 465 ARG A 131 REMARK 465 THR A 132 REMARK 465 GLN A 133 REMARK 465 GLN A 134 REMARK 465 MET A 135 REMARK 465 ARG A 136 REMARK 465 MET A 137 REMARK 465 GLN A 138 REMARK 465 ARG A 139 REMARK 465 LEU A 140 REMARK 465 LYS A 141 REMARK 465 ALA A 142 REMARK 465 LYS A 143 REMARK 465 LEU A 144 REMARK 465 GLN A 145 REMARK 465 MET A 146 REMARK 465 PRO A 147 REMARK 465 PHE A 148 REMARK 465 GLN A 149 REMARK 465 SER A 150 REMARK 465 GLY A 151 REMARK 465 GLU A 152 REMARK 465 PHE A 153 REMARK 465 LYS A 154 REMARK 465 ALA A 155 REMARK 465 LEU A 156 REMARK 465 THR A 157 REMARK 465 ARG A 158 REMARK 465 ARG A 159 REMARK 465 LEU A 160 REMARK 465 GLN A 161 REMARK 465 VAL A 162 REMARK 465 GLU A 163 REMARK 465 PRO A 164 REMARK 465 ARG A 165 REMARK 465 LEU A 166 REMARK 465 LEU A 167 REMARK 465 SER A 168 REMARK 465 LYS A 169 REMARK 465 GLN A 170 REMARK 465 MET A 171 REMARK 465 ALA A 172 REMARK 465 GLY A 173 REMARK 465 CYS A 174 REMARK 465 LEU A 175 REMARK 465 GLU A 176 REMARK 465 ASP A 177 REMARK 465 CYS A 178 REMARK 465 THR A 179 REMARK 465 ARG A 180 REMARK 465 GLN A 181 REMARK 465 ALA A 182 REMARK 465 PRO A 183 REMARK 465 GLU A 184 REMARK 465 SER A 185 REMARK 465 PRO A 186 REMARK 465 TRP A 187 REMARK 465 GLU A 188 REMARK 465 GLU A 189 REMARK 465 GLN A 190 REMARK 465 LEU A 191 REMARK 465 ALA A 192 REMARK 465 ARG A 193 REMARK 465 LEU A 194 REMARK 465 LEU A 195 REMARK 465 GLN A 196 REMARK 465 GLU A 197 REMARK 465 ALA A 198 REMARK 465 PRO A 199 REMARK 465 GLY A 200 REMARK 465 LYS A 201 REMARK 465 LEU A 202 REMARK 465 SER A 203 REMARK 465 LEU A 204 REMARK 465 ASP A 205 REMARK 465 VAL A 206 REMARK 465 GLU A 207 REMARK 465 GLN A 208 REMARK 465 ALA A 209 REMARK 465 PRO A 210 REMARK 465 SER A 211 REMARK 465 GLY A 212 REMARK 465 GLN A 213 REMARK 465 HIS A 214 REMARK 465 SER A 215 REMARK 465 GLN A 216 REMARK 465 ALA A 217 REMARK 465 PRO A 356 REMARK 465 THR A 357 REMARK 465 PHE A 358 REMARK 465 SER A 359 REMARK 465 LEU A 360 REMARK 465 PRO A 361 REMARK 465 PRO A 362 REMARK 465 GLN A 363 REMARK 465 LEU A 364 REMARK 465 PRO A 365 REMARK 465 GLU A 560 REMARK 465 ALA A 561 REMARK 465 LEU A 562 REMARK 465 ARG A 563 REMARK 465 GLU A 564 REMARK 465 GLN A 565 REMARK 465 HIS A 597 REMARK 465 ARG A 598 REMARK 465 GLN A 740 REMARK 465 PRO A 741 REMARK 465 PRO A 742 REMARK 465 GLU A 743 REMARK 465 ALA A 744 REMARK 465 HIS A 745 REMARK 465 LEU A 746 REMARK 465 PRO A 747 REMARK 465 HIS A 748 REMARK 465 SER A 749 REMARK 465 ALA A 750 REMARK 465 ALA A 751 REMARK 465 PRO A 752 REMARK 465 ALA A 753 REMARK 465 ARG A 754 REMARK 465 LYS A 755 REMARK 465 ALA A 756 REMARK 465 GLU A 757 REMARK 465 LEU A 758 REMARK 465 ARG A 759 REMARK 465 ARG A 760 REMARK 465 GLU A 761 REMARK 465 PRO A 1195 REMARK 465 GLN A 1196 REMARK 465 LYS A 1197 REMARK 465 ILE A 1198 REMARK 465 LEU A 1199 REMARK 465 DA N -3 REMARK 465 DT N -2 REMARK 465 DG N -1 REMARK 465 DT N 0 REMARK 465 DG N 1 REMARK 465 DT N 2 REMARK 465 DT N 3 REMARK 465 DA N 4 REMARK 465 DG N 5 REMARK 465 DT N 6 REMARK 465 DT N 7 REMARK 465 DG N 8 REMARK 465 DG N 9 REMARK 465 DG N 10 REMARK 465 DG N 11 REMARK 465 DG N 12 REMARK 465 DG N 13 REMARK 465 DT N 14 REMARK 465 DG N 15 REMARK 465 DA N 16 REMARK 465 DC N 17 REMARK 465 DT N 18 REMARK 465 DG N 19 REMARK 465 DT N 51 REMARK 465 DG N 52 REMARK 465 DA N 53 REMARK 465 DA N 54 REMARK 465 DA N 55 REMARK 465 DT N 56 REMARK 465 DC N 57 REMARK 465 DT N 58 REMARK 465 DG N 59 REMARK 465 DC T -7 REMARK 465 DA T -6 REMARK 465 DG T -5 REMARK 465 DT T -4 REMARK 465 DT T -3 REMARK 465 DT T -2 REMARK 465 DC T -1 REMARK 465 DA T 0 REMARK 465 DC T 32 REMARK 465 DA T 33 REMARK 465 DG T 34 REMARK 465 DT T 35 REMARK 465 DC T 36 REMARK 465 DA T 37 REMARK 465 DC T 38 REMARK 465 DC T 39 REMARK 465 DC T 40 REMARK 465 DC T 41 REMARK 465 DC T 42 REMARK 465 DC T 43 REMARK 465 DA T 44 REMARK 465 DA T 45 REMARK 465 DC T 46 REMARK 465 DT T 47 REMARK 465 DA T 48 REMARK 465 DA T 49 REMARK 465 DC T 50 REMARK 465 DA T 51 REMARK 465 DC T 52 REMARK 465 DA T 53 REMARK 465 DT T 54 REMARK 465 PRO B 60 REMARK 465 PRO B 61 REMARK 465 ARG B 62 REMARK 465 LYS B 63 REMARK 465 ALA B 64 REMARK 465 SER B 65 REMARK 465 LYS B 66 REMARK 465 ALA B 67 REMARK 465 SER B 68 REMARK 465 LEU B 69 REMARK 465 ASP B 70 REMARK 465 LEU B 280 REMARK 465 GLU B 281 REMARK 465 ASN B 282 REMARK 465 PRO B 283 REMARK 465 LYS B 284 REMARK 465 ARG B 285 REMARK 465 ARG B 286 REMARK 465 ASP B 395 REMARK 465 ARG B 396 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 GLN A 311 CG CD OE1 NE2 REMARK 470 ASP A 312 CG OD1 OD2 REMARK 470 GLU A 317 CG CD OE1 OE2 REMARK 470 ARG A 318 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 322 CG CD OE1 NE2 REMARK 470 GLN A 325 CG CD OE1 NE2 REMARK 470 VAL A 337 CG1 CG2 REMARK 470 LEU A 338 CG CD1 CD2 REMARK 470 LEU A 339 CG CD1 CD2 REMARK 470 SER A 340 OG REMARK 470 GLU A 341 CG CD OE1 OE2 REMARK 470 GLU A 342 CG CD OE1 OE2 REMARK 470 ASP A 343 CG OD1 OD2 REMARK 470 LEU A 348 CG CD1 CD2 REMARK 470 HIS A 352 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 353 CG CD CE NZ REMARK 470 GLU A 401 CG CD OE1 OE2 REMARK 470 GLU A 418 CG CD OE1 OE2 REMARK 470 LYS A 595 CG CD CE NZ REMARK 470 GLN A 972 CG CD OE1 NE2 REMARK 470 ILE A1106 CG1 CG2 CD1 REMARK 470 GLU A1177 CG CD OE1 OE2 REMARK 470 PHE B 71 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 LEU B 89 CG CD1 CD2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 ASN B 139 CG OD1 ND2 REMARK 470 LEU B 140 CG CD1 CD2 REMARK 470 ASP B 141 CG OD1 OD2 REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 GLU B 231 CG CD OE1 OE2 REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 ASP B 240 CG OD1 OD2 REMARK 470 TRP B 268 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 268 CZ3 CH2 REMARK 470 SER B 269 OG REMARK 470 SER B 270 OG REMARK 470 ASP B 272 CG OD1 OD2 REMARK 470 ILE B 273 CG1 CG2 CD1 REMARK 470 ARG B 276 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 GLU B 287 CG CD OE1 OE2 REMARK 470 LEU B 288 CG CD1 CD2 REMARK 470 LEU B 289 CG CD1 CD2 REMARK 470 ASP B 290 CG OD1 OD2 REMARK 470 GLN B 291 CG CD OE1 NE2 REMARK 470 GLN B 294 CG CD OE1 NE2 REMARK 470 LYS B 295 CG CD CE NZ REMARK 470 GLU B 394 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 1172 OG SER A 1176 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA N 23 C2' DA N 23 C1' 0.091 REMARK 500 DA N 24 C3' DA N 24 C2' 0.079 REMARK 500 DA N 46 C3' DA N 46 C2' 0.079 REMARK 500 DA T 2 C2' DA T 2 C1' 0.073 REMARK 500 DT T 8 C3' DT T 8 C2' 0.102 REMARK 500 DT T 10 O3' DC T 11 P 0.073 REMARK 500 DT T 26 O3' DT T 27 P -0.099 REMARK 500 DT T 27 C3' DT T 27 C2' 0.169 REMARK 500 DT T 27 C2' DT T 27 C1' 0.079 REMARK 500 DT T 28 O3' DT T 29 P 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 596 CA - N - CD ANGL. DEV. = -12.0 DEGREES REMARK 500 DA N 23 C3' - C2' - C1' ANGL. DEV. = -7.3 DEGREES REMARK 500 DA N 23 C3' - O3' - P ANGL. DEV. = -14.8 DEGREES REMARK 500 DA N 24 C3' - O3' - P ANGL. DEV. = -10.5 DEGREES REMARK 500 DA N 25 O3' - P - OP2 ANGL. DEV. = 9.4 DEGREES REMARK 500 DG N 28 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC N 29 C3' - O3' - P ANGL. DEV. = -11.2 DEGREES REMARK 500 DT N 44 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DA N 47 O3' - P - OP2 ANGL. DEV. = 7.5 DEGREES REMARK 500 DA T 2 C3' - C2' - C1' ANGL. DEV. = -6.3 DEGREES REMARK 500 DT T 4 C3' - O3' - P ANGL. DEV. = 7.7 DEGREES REMARK 500 DT T 6 O3' - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 DT T 8 O3' - P - OP2 ANGL. DEV. = 9.1 DEGREES REMARK 500 DT T 8 C3' - C2' - C1' ANGL. DEV. = -7.2 DEGREES REMARK 500 DT T 8 C3' - O3' - P ANGL. DEV. = -10.3 DEGREES REMARK 500 DC T 9 O3' - P - OP1 ANGL. DEV. = 6.9 DEGREES REMARK 500 DT T 21 O3' - P - OP2 ANGL. DEV. = 6.9 DEGREES REMARK 500 DG T 22 C3' - O3' - P ANGL. DEV. = -10.5 DEGREES REMARK 500 DC T 23 C3' - O3' - P ANGL. DEV. = -13.4 DEGREES REMARK 500 DT T 27 C3' - C2' - C1' ANGL. DEV. = -11.0 DEGREES REMARK 500 DT T 29 C3' - O3' - P ANGL. DEV. = -12.6 DEGREES REMARK 500 DA T 30 O3' - P - OP2 ANGL. DEV. = 8.0 DEGREES REMARK 500 GTP R 1 C3' - O3' - P ANGL. DEV. = -9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 238 57.15 -94.89 REMARK 500 ASP A 310 62.81 61.29 REMARK 500 LYS A 419 73.44 53.14 REMARK 500 ASN A 614 -119.50 59.85 REMARK 500 ALA A 662 -109.43 58.54 REMARK 500 ALA A 723 -62.77 -93.49 REMARK 500 CYS A 726 84.38 -156.62 REMARK 500 LYS A 852 41.30 -108.55 REMARK 500 SER A1086 -61.23 -98.03 REMARK 500 HIS A1150 -27.75 65.22 REMARK 500 ASP A1151 0.22 -154.81 REMARK 500 PRO B 96 2.29 -65.85 REMARK 500 ASN B 103 73.19 53.42 REMARK 500 ASP B 155 70.94 55.45 REMARK 500 SER B 216 -133.84 62.49 REMARK 500 THR B 309 -169.28 -124.96 REMARK 500 ARG B 379 33.11 -98.28 REMARK 500 GLU B 391 -10.63 83.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-51729 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE HUMAN MITOCHONDRIAL RNA POLYMERASE REMARK 900 TRANSCRIPTION INITIATION COMPLEX WITH A SLIPPED 3-MER RNA, PPPGPGPA REMARK 900 (SLIPPED IC3) REMARK 900 RELATED ID: 9GZM RELATED DB: PDB REMARK 900 RELATED ID: 9GZN RELATED DB: PDB REMARK 900 RELATED ID: 9R95 RELATED DB: PDB REMARK 900 RELATED ID: 9R96 RELATED DB: PDB REMARK 900 RELATED ID: EMD-51727 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-51728 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-53853 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-53854 RELATED DB: EMDB DBREF 9GZO A 43 1230 UNP O00411 RPOM_HUMAN 43 1230 DBREF 9GZO N -3 59 PDB 9GZO 9GZO -3 59 DBREF 9GZO T -7 54 PDB 9GZO 9GZO -7 54 DBREF 9GZO B 60 396 UNP Q9H5Q4 TFB2M_HUMAN 60 396 DBREF 9GZO R 1 3 PDB 9GZO 9GZO 1 3 SEQRES 1 A 1188 SER ALA SER PRO GLN GLU GLN ASP GLN ASP ARG ARG LYS SEQRES 2 A 1188 ASP TRP GLY HIS VAL GLU LEU LEU GLU VAL LEU GLN ALA SEQRES 3 A 1188 ARG VAL ARG GLN LEU GLN ALA GLU SER VAL SER GLU VAL SEQRES 4 A 1188 VAL VAL ASN ARG VAL ASP VAL ALA ARG LEU PRO GLU CYS SEQRES 5 A 1188 GLY SER GLY ASP GLY SER LEU GLN PRO PRO ARG LYS VAL SEQRES 6 A 1188 GLN MET GLY ALA LYS ASP ALA THR PRO VAL PRO CYS GLY SEQRES 7 A 1188 ARG TRP ALA LYS ILE LEU GLU LYS ASP LYS ARG THR GLN SEQRES 8 A 1188 GLN MET ARG MET GLN ARG LEU LYS ALA LYS LEU GLN MET SEQRES 9 A 1188 PRO PHE GLN SER GLY GLU PHE LYS ALA LEU THR ARG ARG SEQRES 10 A 1188 LEU GLN VAL GLU PRO ARG LEU LEU SER LYS GLN MET ALA SEQRES 11 A 1188 GLY CYS LEU GLU ASP CYS THR ARG GLN ALA PRO GLU SER SEQRES 12 A 1188 PRO TRP GLU GLU GLN LEU ALA ARG LEU LEU GLN GLU ALA SEQRES 13 A 1188 PRO GLY LYS LEU SER LEU ASP VAL GLU GLN ALA PRO SER SEQRES 14 A 1188 GLY GLN HIS SER GLN ALA GLN LEU SER GLY GLN GLN GLN SEQRES 15 A 1188 ARG LEU LEU ALA PHE PHE LYS CYS CYS LEU LEU THR ASP SEQRES 16 A 1188 GLN LEU PRO LEU ALA HIS HIS LEU LEU VAL VAL HIS HIS SEQRES 17 A 1188 GLY GLN ARG GLN LYS ARG LYS LEU LEU THR LEU ASP MET SEQRES 18 A 1188 TYR ASN ALA VAL MET LEU GLY TRP ALA ARG GLN GLY ALA SEQRES 19 A 1188 PHE LYS GLU LEU VAL TYR VAL LEU PHE MET VAL LYS ASP SEQRES 20 A 1188 ALA GLY LEU THR PRO ASP LEU LEU SER TYR ALA ALA ALA SEQRES 21 A 1188 LEU GLN CYS MET GLY ARG GLN ASP GLN ASP ALA GLY THR SEQRES 22 A 1188 ILE GLU ARG CYS LEU GLU GLN MET SER GLN GLU GLY LEU SEQRES 23 A 1188 LYS LEU GLN ALA LEU PHE THR ALA VAL LEU LEU SER GLU SEQRES 24 A 1188 GLU ASP ARG ALA THR VAL LEU LYS ALA VAL HIS LYS VAL SEQRES 25 A 1188 LYS PRO THR PHE SER LEU PRO PRO GLN LEU PRO PRO PRO SEQRES 26 A 1188 VAL ASN THR SER LYS LEU LEU ARG ASP VAL TYR ALA LYS SEQRES 27 A 1188 ASP GLY ARG VAL SER TYR PRO LYS LEU HIS LEU PRO LEU SEQRES 28 A 1188 LYS THR LEU GLN CYS LEU PHE GLU LYS GLN LEU HIS MET SEQRES 29 A 1188 GLU LEU ALA SER ARG VAL CYS VAL VAL SER VAL GLU LYS SEQRES 30 A 1188 PRO THR LEU PRO SER LYS GLU VAL LYS HIS ALA ARG LYS SEQRES 31 A 1188 THR LEU LYS THR LEU ARG ASP GLN TRP GLU LYS ALA LEU SEQRES 32 A 1188 CYS ARG ALA LEU ARG GLU THR LYS ASN ARG LEU GLU ARG SEQRES 33 A 1188 GLU VAL TYR GLU GLY ARG PHE SER LEU TYR PRO PHE LEU SEQRES 34 A 1188 CYS LEU LEU ASP GLU ARG GLU VAL VAL ARG MET LEU LEU SEQRES 35 A 1188 GLN VAL LEU GLN ALA LEU PRO ALA GLN GLY GLU SER PHE SEQRES 36 A 1188 THR THR LEU ALA ARG GLU LEU SER ALA ARG THR PHE SER SEQRES 37 A 1188 ARG HIS VAL VAL GLN ARG GLN ARG VAL SER GLY GLN VAL SEQRES 38 A 1188 GLN ALA LEU GLN ASN HIS TYR ARG LYS TYR LEU CYS LEU SEQRES 39 A 1188 LEU ALA SER ASP ALA GLU VAL PRO GLU PRO CYS LEU PRO SEQRES 40 A 1188 ARG GLN TYR TRP GLU GLU LEU GLY ALA PRO GLU ALA LEU SEQRES 41 A 1188 ARG GLU GLN PRO TRP PRO LEU PRO VAL GLN MET GLU LEU SEQRES 42 A 1188 GLY LYS LEU LEU ALA GLU MET LEU VAL GLN ALA THR GLN SEQRES 43 A 1188 MET PRO CYS SER LEU ASP LYS PRO HIS ARG SER SER ARG SEQRES 44 A 1188 LEU VAL PRO VAL LEU TYR HIS VAL TYR SER PHE ARG ASN SEQRES 45 A 1188 VAL GLN GLN ILE GLY ILE LEU LYS PRO HIS PRO ALA TYR SEQRES 46 A 1188 VAL GLN LEU LEU GLU LYS ALA ALA GLU PRO THR LEU THR SEQRES 47 A 1188 PHE GLU ALA VAL ASP VAL PRO MET LEU CYS PRO PRO LEU SEQRES 48 A 1188 PRO TRP THR SER PRO HIS SER GLY ALA PHE LEU LEU SER SEQRES 49 A 1188 PRO THR LYS LEU MET ARG THR VAL GLU GLY ALA THR GLN SEQRES 50 A 1188 HIS GLN GLU LEU LEU GLU THR CYS PRO PRO THR ALA LEU SEQRES 51 A 1188 HIS GLY ALA LEU ASP ALA LEU THR GLN LEU GLY ASN CYS SEQRES 52 A 1188 ALA TRP ARG VAL ASN GLY ARG VAL LEU ASP LEU VAL LEU SEQRES 53 A 1188 GLN LEU PHE GLN ALA LYS GLY CYS PRO GLN LEU GLY VAL SEQRES 54 A 1188 PRO ALA PRO PRO SER GLU ALA PRO GLN PRO PRO GLU ALA SEQRES 55 A 1188 HIS LEU PRO HIS SER ALA ALA PRO ALA ARG LYS ALA GLU SEQRES 56 A 1188 LEU ARG ARG GLU LEU ALA HIS CYS GLN LYS VAL ALA ARG SEQRES 57 A 1188 GLU MET HIS SER LEU ARG ALA GLU ALA LEU TYR ARG LEU SEQRES 58 A 1188 SER LEU ALA GLN HIS LEU ARG ASP ARG VAL PHE TRP LEU SEQRES 59 A 1188 PRO HIS ASN MET ASP PHE ARG GLY ARG THR TYR PRO CYS SEQRES 60 A 1188 PRO PRO HIS PHE ASN HIS LEU GLY SER ASP VAL ALA ARG SEQRES 61 A 1188 ALA LEU LEU GLU PHE ALA GLN GLY ARG PRO LEU GLY PRO SEQRES 62 A 1188 HIS GLY LEU ASP TRP LEU LYS ILE HIS LEU VAL ASN LEU SEQRES 63 A 1188 THR GLY LEU LYS LYS ARG GLU PRO LEU ARG LYS ARG LEU SEQRES 64 A 1188 ALA PHE ALA GLU GLU VAL MET ASP ASP ILE LEU ASP SER SEQRES 65 A 1188 ALA ASP GLN PRO LEU THR GLY ARG LYS TRP TRP MET GLY SEQRES 66 A 1188 ALA GLU GLU PRO TRP GLN THR LEU ALA CYS CYS MET GLU SEQRES 67 A 1188 VAL ALA ASN ALA VAL ARG ALA SER ASP PRO ALA ALA TYR SEQRES 68 A 1188 VAL SER HIS LEU PRO VAL HIS GLN ASP GLY SER CYS ASN SEQRES 69 A 1188 GLY LEU GLN HIS TYR ALA ALA LEU GLY ARG ASP SER VAL SEQRES 70 A 1188 GLY ALA ALA SER VAL ASN LEU GLU PRO SER ASP VAL PRO SEQRES 71 A 1188 GLN ASP VAL TYR SER GLY VAL ALA ALA GLN VAL GLU VAL SEQRES 72 A 1188 PHE ARG ARG GLN ASP ALA GLN ARG GLY MET ARG VAL ALA SEQRES 73 A 1188 GLN VAL LEU GLU GLY PHE ILE THR ARG LYS VAL VAL LYS SEQRES 74 A 1188 GLN THR VAL MET THR VAL VAL TYR GLY VAL THR ARG TYR SEQRES 75 A 1188 GLY GLY ARG LEU GLN ILE GLU LYS ARG LEU ARG GLU LEU SEQRES 76 A 1188 SER ASP PHE PRO GLN GLU PHE VAL TRP GLU ALA SER HIS SEQRES 77 A 1188 TYR LEU VAL ARG GLN VAL PHE LYS SER LEU GLN GLU MET SEQRES 78 A 1188 PHE SER GLY THR ARG ALA ILE GLN HIS TRP LEU THR GLU SEQRES 79 A 1188 SER ALA ARG LEU ILE SER HIS MET GLY SER VAL VAL GLU SEQRES 80 A 1188 TRP VAL THR PRO LEU GLY VAL PRO VAL ILE GLN PRO TYR SEQRES 81 A 1188 ARG LEU ASP SER LYS VAL LYS GLN ILE GLY GLY GLY ILE SEQRES 82 A 1188 GLN SER ILE THR TYR THR HIS ASN GLY ASP ILE SER ARG SEQRES 83 A 1188 LYS PRO ASN THR ARG LYS GLN LYS ASN GLY PHE PRO PRO SEQRES 84 A 1188 ASN PHE ILE HIS SER LEU ASP SER SER HIS MET MET LEU SEQRES 85 A 1188 THR ALA LEU HIS CYS TYR ARG LYS GLY LEU THR PHE VAL SEQRES 86 A 1188 SER VAL HIS ASP CYS TYR TRP THR HIS ALA ALA ASP VAL SEQRES 87 A 1188 SER VAL MET ASN GLN VAL CYS ARG GLU GLN PHE VAL ARG SEQRES 88 A 1188 LEU HIS SER GLU PRO ILE LEU GLN ASP LEU SER ARG PHE SEQRES 89 A 1188 LEU VAL LYS ARG PHE CYS SER GLU PRO GLN LYS ILE LEU SEQRES 90 A 1188 GLU ALA SER GLN LEU LYS GLU THR LEU GLN ALA VAL PRO SEQRES 91 A 1188 LYS PRO GLY ALA PHE ASP LEU GLU GLN VAL LYS ARG SER SEQRES 92 A 1188 THR TYR PHE PHE SER SEQRES 1 N 63 DA DT DG DT DG DT DT DA DG DT DT DG DG SEQRES 2 N 63 DG DG DG DG DT DG DA DC DT DG DT DT DA SEQRES 3 N 63 DA DA DA DG DT DG DC DA DT DA DC DC DG SEQRES 4 N 63 DA DA DC DA DA DA DG DA DT DA DA DA DA SEQRES 5 N 63 DT DT DT DG DA DA DA DT DC DT DG SEQRES 1 T 62 DC DA DG DT DT DT DC DA DA DA DT DT DT SEQRES 2 T 62 DT DA DT DC DT DC DC DA DG DG DC DG DG SEQRES 3 T 62 DT DA DT DG DC DA DC DT DT DT DT DA DA SEQRES 4 T 62 DC DA DG DT DC DA DC DC DC DC DC DC DA SEQRES 5 T 62 DA DC DT DA DA DC DA DC DA DT SEQRES 1 B 337 PRO PRO ARG LYS ALA SER LYS ALA SER LEU ASP PHE LYS SEQRES 2 B 337 ARG TYR VAL THR ASP ARG ARG LEU ALA GLU THR LEU ALA SEQRES 3 B 337 GLN ILE TYR LEU GLY LYS PRO SER ARG PRO PRO HIS LEU SEQRES 4 B 337 LEU LEU GLU CYS ASN PRO GLY PRO GLY ILE LEU THR GLN SEQRES 5 B 337 ALA LEU LEU GLU ALA GLY ALA LYS VAL VAL ALA LEU GLU SEQRES 6 B 337 SER ASP LYS THR PHE ILE PRO HIS LEU GLU SER LEU GLY SEQRES 7 B 337 LYS ASN LEU ASP GLY LYS LEU ARG VAL ILE HIS CYS ASP SEQRES 8 B 337 PHE PHE LYS LEU ASP PRO ARG SER GLY GLY VAL ILE LYS SEQRES 9 B 337 PRO PRO ALA MET SER SER ARG GLY LEU PHE LYS ASN LEU SEQRES 10 B 337 GLY ILE GLU ALA VAL PRO TRP THR ALA ASP ILE PRO LEU SEQRES 11 B 337 LYS VAL VAL GLY MET PHE PRO SER ARG GLY GLU LYS ARG SEQRES 12 B 337 ALA LEU TRP LYS LEU ALA TYR ASP LEU TYR SER CYS THR SEQRES 13 B 337 SER ILE TYR LYS PHE GLY ARG ILE GLU VAL ASN MET PHE SEQRES 14 B 337 ILE GLY GLU LYS GLU PHE GLN LYS LEU MET ALA ASP PRO SEQRES 15 B 337 GLY ASN PRO ASP LEU TYR HIS VAL LEU SER VAL ILE TRP SEQRES 16 B 337 GLN LEU ALA CYS GLU ILE LYS VAL LEU HIS MET GLU PRO SEQRES 17 B 337 TRP SER SER PHE ASP ILE TYR THR ARG LYS GLY PRO LEU SEQRES 18 B 337 GLU ASN PRO LYS ARG ARG GLU LEU LEU ASP GLN LEU GLN SEQRES 19 B 337 GLN LYS LEU TYR LEU ILE GLN MET ILE PRO ARG GLN ASN SEQRES 20 B 337 LEU PHE THR LYS ASN LEU THR PRO MET ASN TYR ASN ILE SEQRES 21 B 337 PHE PHE HIS LEU LEU LYS HIS CYS PHE GLY ARG ARG SER SEQRES 22 B 337 ALA THR VAL ILE ASP HIS LEU ARG SER LEU THR PRO LEU SEQRES 23 B 337 ASP ALA ARG ASP ILE LEU MET GLN ILE GLY LYS GLN GLU SEQRES 24 B 337 ASP GLU LYS VAL VAL ASN MET HIS PRO GLN ASP PHE LYS SEQRES 25 B 337 THR LEU PHE GLU THR ILE GLU ARG SER LYS ASP CYS ALA SEQRES 26 B 337 TYR LYS TRP LEU TYR ASP GLU THR LEU GLU ASP ARG SEQRES 1 R 3 GTP G A HET GTP R 1 32 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 5 GTP C10 H16 N5 O14 P3 HELIX 1 AA1 SER A 220 ASP A 237 1 18 HELIX 2 AA2 GLN A 238 GLN A 252 1 15 HELIX 3 AA3 GLN A 252 LYS A 257 1 6 HELIX 4 AA4 THR A 260 ARG A 273 1 14 HELIX 5 AA5 ALA A 276 GLY A 291 1 16 HELIX 6 AA6 ASP A 295 ASP A 310 1 16 HELIX 7 AA7 ASP A 312 MET A 323 1 12 HELIX 8 AA8 LYS A 329 VAL A 337 1 9 HELIX 9 AA9 SER A 340 LYS A 355 1 16 HELIX 10 AB1 LEU A 374 ALA A 379 1 6 HELIX 11 AB2 PRO A 392 SER A 410 1 19 HELIX 12 AB3 SER A 424 TYR A 461 1 38 HELIX 13 AB4 LEU A 467 LEU A 473 1 7 HELIX 14 AB5 ASP A 475 ALA A 489 1 15 HELIX 15 AB6 SER A 496 GLY A 521 1 26 HELIX 16 AB7 GLY A 521 ALA A 538 1 18 HELIX 17 AB8 LEU A 548 LEU A 556 1 9 HELIX 18 AB9 PRO A 568 THR A 587 1 20 HELIX 19 AC1 HIS A 624 ALA A 635 1 12 HELIX 20 AC2 THR A 678 CYS A 687 1 10 HELIX 21 AC3 LEU A 692 CYS A 705 1 14 HELIX 22 AC4 ASN A 710 LYS A 724 1 15 HELIX 23 AC5 ALA A 763 LEU A 789 1 27 HELIX 24 AC6 SER A 818 LEU A 824 1 7 HELIX 25 AC7 HIS A 836 GLY A 850 1 15 HELIX 26 AC8 PRO A 856 VAL A 867 1 12 HELIX 27 AC9 VAL A 867 GLN A 877 1 11 HELIX 28 AD1 LYS A 883 ALA A 888 5 6 HELIX 29 AD2 GLU A 890 ARG A 906 1 17 HELIX 30 AD3 ASP A 909 ALA A 912 5 4 HELIX 31 AD4 CYS A 925 ARG A 936 1 12 HELIX 32 AD5 ASP A 937 VAL A 944 1 8 HELIX 33 AD6 ASP A 954 GLN A 972 1 19 HELIX 34 AD7 MET A 975 LEU A 981 1 7 HELIX 35 AD8 THR A 986 THR A 996 1 11 HELIX 36 AD9 THR A 1002 LEU A 1017 1 16 HELIX 37 AE1 PRO A 1021 GLU A 1023 5 3 HELIX 38 AE2 PHE A 1024 PHE A 1044 1 21 HELIX 39 AE3 SER A 1045 GLY A 1065 1 21 HELIX 40 AE4 ASN A 1111 ASN A 1117 1 7 HELIX 41 AE5 GLY A 1118 ARG A 1141 1 24 HELIX 42 AE6 ASP A 1159 HIS A 1175 1 17 HELIX 43 AE7 PRO A 1178 CYS A 1192 1 15 HELIX 44 AE8 ALA A 1201 ALA A 1210 1 10 HELIX 45 AE9 ASP A 1218 LYS A 1223 5 6 HELIX 46 AF1 ASP B 77 GLY B 90 1 14 HELIX 47 AF2 GLY B 107 ALA B 116 1 10 HELIX 48 AF3 PHE B 129 LEU B 140 1 12 HELIX 49 AF4 SER B 168 GLY B 177 1 10 HELIX 50 AF5 GLY B 199 CYS B 214 1 16 HELIX 51 AF6 THR B 215 PHE B 220 5 6 HELIX 52 AF7 GLY B 230 MET B 238 1 9 HELIX 53 AF8 HIS B 248 LEU B 256 1 9 HELIX 54 AF9 LEU B 288 GLN B 294 1 7 HELIX 55 AG1 ASN B 316 PHE B 328 1 13 HELIX 56 AG2 THR B 334 THR B 343 1 10 HELIX 57 AG3 ASP B 346 ILE B 354 1 9 HELIX 58 AG4 HIS B 366 ARG B 379 1 14 SHEET 1 AA1 2 ARG A 411 VAL A 415 0 SHEET 2 AA1 2 THR A 638 GLU A 642 -1 O LEU A 639 N VAL A 414 SHEET 1 AA2 2 MET A 589 PRO A 590 0 SHEET 2 AA2 2 LEU A 602 VAL A 603 -1 O VAL A 603 N MET A 589 SHEET 1 AA3 2 LEU A 606 ARG A 613 0 SHEET 2 AA3 2 GLN A 616 PRO A 623 -1 O ILE A 620 N VAL A 609 SHEET 1 AA4 3 PHE A 794 TRP A 795 0 SHEET 2 AA4 3 ALA A 706 VAL A 709 -1 N TRP A 707 O PHE A 794 SHEET 3 AA4 3 LEU A 825 GLU A 826 -1 O GLU A 826 N ARG A 708 SHEET 1 AA5 2 HIS A 798 MET A 800 0 SHEET 2 AA5 2 THR A 806 PRO A 808 -1 O TYR A 807 N ASN A 799 SHEET 1 AA6 2 ARG A 831 PRO A 832 0 SHEET 2 AA6 2 VAL A 914 SER A 915 -1 O SER A 915 N ARG A 831 SHEET 1 AA7 3 PRO A 918 GLN A 921 0 SHEET 2 AA7 3 CYS A1152 HIS A1156 -1 O THR A1155 N VAL A 919 SHEET 3 AA7 3 VAL A1147 VAL A1149 -1 N VAL A1147 O TRP A1154 SHEET 1 AA8 2 GLU A1069 VAL A1071 0 SHEET 2 AA8 2 PRO A1077 ILE A1079 -1 O VAL A1078 N TRP A1070 SHEET 1 AA9 2 LYS A1089 ILE A1091 0 SHEET 2 AA9 2 ILE A1098 TYR A1100 -1 O ILE A1098 N ILE A1091 SHEET 1 AB1 2 LYS B 72 VAL B 75 0 SHEET 2 AB1 2 PHE B 271 TYR B 274 -1 O ASP B 272 N TYR B 74 SHEET 1 AB2 5 LEU B 99 GLU B 101 0 SHEET 2 AB2 5 LYS B 190 MET B 194 1 O LYS B 190 N LEU B 100 SHEET 3 AB2 5 GLU B 224 ILE B 229 1 O ASN B 226 N VAL B 191 SHEET 4 AB2 5 LYS B 295 GLN B 300 -1 O ILE B 299 N MET B 227 SHEET 5 AB2 5 LYS B 261 PRO B 267 -1 N GLU B 266 O LEU B 296 SHEET 1 AB3 2 LEU B 123 GLU B 124 0 SHEET 2 AB3 2 ILE B 147 HIS B 148 1 O ILE B 147 N GLU B 124 LINK O3' GTP R 1 P G R 2 1555 1555 1.61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 7627 SER A1230 TER 8268 DT N 50 TER 8901 DA T 31 TER 11377 GLU B 394 HETATM11378 PG GTP R 1 67.201 79.385 60.343 1.00 73.80 P HETATM11379 O1G GTP R 1 66.088 78.420 60.034 1.00 73.80 O HETATM11380 O2G GTP R 1 67.867 79.094 61.665 1.00 73.80 O HETATM11381 O3G GTP R 1 66.774 80.823 60.206 1.00 73.80 O HETATM11382 O3B GTP R 1 68.321 79.151 59.210 1.00 73.80 O HETATM11383 PB GTP R 1 69.752 79.811 58.935 1.00 73.80 P HETATM11384 O1B GTP R 1 69.549 81.156 58.324 1.00 73.80 O HETATM11385 O2B GTP R 1 70.572 79.685 60.174 1.00 73.80 O HETATM11386 O3A GTP R 1 70.327 78.807 57.827 1.00 73.80 O HETATM11387 PA GTP R 1 71.801 78.380 57.355 1.00 73.80 P HETATM11388 O1A GTP R 1 72.510 77.750 58.507 1.00 73.80 O HETATM11389 O2A GTP R 1 72.450 79.538 56.673 1.00 73.80 O HETATM11390 O5' GTP R 1 71.452 77.253 56.271 1.00 73.80 O HETATM11391 C5' GTP R 1 70.721 77.663 55.092 1.00 73.80 C HETATM11392 C4' GTP R 1 69.993 76.477 54.508 1.00 73.80 C HETATM11393 O4' GTP R 1 70.037 75.303 55.404 1.00 73.80 O HETATM11394 C3' GTP R 1 68.511 76.693 54.190 1.00 73.80 C HETATM11395 O3' GTP R 1 68.333 77.309 52.920 1.00 73.80 O HETATM11396 C2' GTP R 1 67.983 75.258 54.265 1.00 73.80 C HETATM11397 O2' GTP R 1 68.358 74.505 53.134 1.00 73.80 O HETATM11398 C1' GTP R 1 68.745 74.742 55.483 1.00 73.80 C HETATM11399 N9 GTP R 1 68.166 75.113 56.768 1.00 73.80 N HETATM11400 C8 GTP R 1 68.842 75.714 57.799 1.00 73.80 C HETATM11401 N7 GTP R 1 68.099 75.929 58.854 1.00 73.80 N HETATM11402 C5 GTP R 1 66.860 75.412 58.506 1.00 73.80 C HETATM11403 C6 GTP R 1 65.665 75.354 59.260 1.00 73.80 C HETATM11404 O6 GTP R 1 65.472 75.759 60.412 1.00 73.80 O HETATM11405 N1 GTP R 1 64.638 74.746 58.541 1.00 73.80 N HETATM11406 C2 GTP R 1 64.748 74.262 57.262 1.00 73.80 C HETATM11407 N2 GTP R 1 63.646 73.713 56.735 1.00 73.80 N HETATM11408 N3 GTP R 1 65.870 74.318 56.546 1.00 73.80 N HETATM11409 C4 GTP R 1 66.885 74.902 57.227 1.00 73.80 C TER 11455 A R 3 CONECT1137811379113801138111382 CONECT1137911378 CONECT1138011378 CONECT1138111378 CONECT113821137811383 CONECT1138311382113841138511386 CONECT1138411383 CONECT1138511383 CONECT113861138311387 CONECT1138711386113881138911390 CONECT1138811387 CONECT1138911387 CONECT113901138711391 CONECT113911139011392 CONECT11392113911139311394 CONECT113931139211398 CONECT11394113921139511396 CONECT113951139411410 CONECT11396113941139711398 CONECT1139711396 CONECT11398113931139611399 CONECT11399113981140011409 CONECT114001139911401 CONECT114011140011402 CONECT11402114011140311409 CONECT11403114021140411405 CONECT1140411403 CONECT114051140311406 CONECT11406114051140711408 CONECT1140711406 CONECT114081140611409 CONECT11409113991140211408 CONECT1141011395 MASTER 600 0 1 58 29 0 0 611450 5 33 129 END