HEADER RNA BINDING PROTEIN 10-OCT-24 9H21 TITLE CAS9 IN COMPLEX WITH TRACRRNA AND CRRNA, STREPTOCOCCUS THERMOPHILUS TITLE 2 DGCC 7710 CRISPR3 SYSTEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED ENDONUCLEASE CAS9; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ST-CAS9; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CRRNA (5'- COMPND 9 R(P*GP*AP*AP*GP*AP*GP*GP*AP*CP*AP*GP*UP*UP*UP*UP*AP*GP*AP*GP*CP*UP*G) COMPND 10 -3'); COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TRACRRNA (62-MER); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS THERMOPHILUS DGCC 7710; SOURCE 3 ORGANISM_TAXID: 1268061; SOURCE 4 GENE: CAS9, CSN1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI STR. K-12 SUBSTR. DH10B; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 316385; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS CAS9, CRISPR-CAS, PAM, SPACER ACQUISITION, RNA BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR G.SASNAUSKAS,U.GAIZAUSKAITE,G.TAMULAITIENE REVDAT 1 18-FEB-26 9H21 0 JRNL AUTH G.SASNAUSKAS,U.GAIZAUSKAITE,G.TAMULAITIENE JRNL TITL STRUCTURAL BASIS FOR CAS9-MEDIATED PRESPACER SELECTION IN JRNL TITL 2 CRISPR-CAS ADAPTATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.330 REMARK 3 NUMBER OF PARTICLES : 108160 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9H21 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1292142359. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CAS9:TRACRRNA:CRRNA COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1551 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 92000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 250 REMARK 465 ASP A 251 REMARK 465 PHE A 252 REMARK 465 ARG A 253 REMARK 465 LYS A 254 REMARK 465 CYS A 255 REMARK 465 PHE A 256 REMARK 465 ASN A 257 REMARK 465 LEU A 258 REMARK 465 ASP A 259 REMARK 465 GLU A 260 REMARK 465 LYS A 261 REMARK 465 ALA A 262 REMARK 465 SER A 263 REMARK 465 LEU A 264 REMARK 465 HIS A 265 REMARK 465 PHE A 266 REMARK 465 SER A 267 REMARK 465 LYS A 268 REMARK 465 GLU A 269 REMARK 465 SER A 270 REMARK 465 TYR A 271 REMARK 465 ASP A 272 REMARK 465 GLU A 273 REMARK 465 ASP A 274 REMARK 465 LEU A 275 REMARK 465 GLU A 276 REMARK 465 THR A 277 REMARK 465 LEU A 278 REMARK 465 LEU A 279 REMARK 465 GLY A 280 REMARK 465 TYR A 281 REMARK 465 ILE A 282 REMARK 465 GLY A 283 REMARK 465 ASP A 284 REMARK 465 ASP A 285 REMARK 465 ARG A 766 REMARK 465 GLU A 767 REMARK 465 ASN A 768 REMARK 465 GLN A 769 REMARK 465 TYR A 770 REMARK 465 THR A 771 REMARK 465 ASN A 772 REMARK 465 GLN A 773 REMARK 465 GLY A 774 REMARK 465 LYS A 775 REMARK 465 SER A 776 REMARK 465 GLY A 1386 REMARK 465 GLU A 1387 REMARK 465 GLY A 1388 REMARK 465 LEU A 1389 REMARK 465 GLU A 1390 REMARK 465 GLY A 1391 REMARK 465 HIS A 1392 REMARK 465 HIS A 1393 REMARK 465 HIS A 1394 REMARK 465 HIS A 1395 REMARK 465 HIS A 1396 REMARK 465 HIS A 1397 REMARK 465 C B -20 REMARK 465 G B -19 REMARK 465 C B -18 REMARK 465 U B -17 REMARK 465 A B -16 REMARK 465 A B -15 REMARK 465 A B -14 REMARK 465 G B -13 REMARK 465 A B -12 REMARK 465 G B -11 REMARK 465 U B 12 REMARK 465 G B 13 REMARK 465 U B 14 REMARK 465 U B 15 REMARK 465 G B 16 REMARK 465 U B 17 REMARK 465 U B 18 REMARK 465 U B 19 REMARK 465 C B 20 REMARK 465 G B 21 REMARK 465 C C 1 REMARK 465 G C 2 REMARK 465 A C 3 REMARK 465 A C 4 REMARK 465 A C 5 REMARK 465 C C 6 REMARK 465 A C 7 REMARK 465 A C 8 REMARK 465 C C 9 REMARK 465 A C 10 REMARK 465 U C 73 REMARK 465 U C 74 REMARK 465 U C 75 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 ASP A 180 CG OD1 OD2 REMARK 470 GLN A 182 CG CD OE1 NE2 REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 ASP A 187 CG OD1 OD2 REMARK 470 ASP A 190 CG OD1 OD2 REMARK 470 GLU A 197 CG CD OE1 OE2 REMARK 470 SER A 198 OG REMARK 470 ASP A 199 CG OD1 OD2 REMARK 470 LEU A 200 CG CD1 CD2 REMARK 470 LEU A 202 CG CD1 CD2 REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 ASN A 204 CG OD1 ND2 REMARK 470 SER A 205 OG REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 GLU A 210 CG CD OE1 OE2 REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 ASP A 214 CG OD1 OD2 REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 ILE A 216 CG1 CG2 CD1 REMARK 470 SER A 217 OG REMARK 470 LEU A 219 CG CD1 CD2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 ASP A 223 CG OD1 OD2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 GLU A 240 CG CD OE1 OE2 REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 ASN A 248 CG OD1 ND2 REMARK 470 GLN A 249 CG CD OE1 NE2 REMARK 470 TYR A 286 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 288 CG OD1 OD2 REMARK 470 SER A 303 OG REMARK 470 THR A 307 OG1 CG2 REMARK 470 VAL A 308 CG1 CG2 REMARK 470 THR A 309 OG1 CG2 REMARK 470 ASP A 310 CG OD1 OD2 REMARK 470 ASN A 311 CG OD1 ND2 REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 GLU A 337 CG CD OE1 OE2 REMARK 470 ILE A 342 CG1 CG2 CD1 REMARK 470 GLU A 349 CG CD OE1 OE2 REMARK 470 ASP A 353 CG OD1 OD2 REMARK 470 ASP A 354 CG OD1 OD2 REMARK 470 GLU A 370 CG CD OE1 OE2 REMARK 470 ASP A 371 CG OD1 OD2 REMARK 470 LYS A 377 CG CD CE NZ REMARK 470 ASN A 378 CG OD1 ND2 REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 GLU A 384 CG CD OE1 OE2 REMARK 470 ASP A 387 CG OD1 OD2 REMARK 470 GLU A 391 CG CD OE1 OE2 REMARK 470 ASP A 394 CG OD1 OD2 REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 ASP A 424 CG OD1 OD2 REMARK 470 GLU A 438 CG CD OE1 OE2 REMARK 470 ASP A 461 CG OD1 OD2 REMARK 470 ASN A 470 CG OD1 ND2 REMARK 470 GLU A 471 CG CD OE1 OE2 REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 470 ASP A 480 CG OD1 OD2 REMARK 470 GLU A 485 CG CD OE1 OE2 REMARK 470 GLU A 504 CG CD OE1 OE2 REMARK 470 GLU A 505 CG CD OE1 OE2 REMARK 470 GLU A 523 CG CD OE1 OE2 REMARK 470 GLU A 532 CG CD OE1 OE2 REMARK 470 SER A 533 OG REMARK 470 MET A 534 CG SD CE REMARK 470 ARG A 535 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 536 CG OD1 OD2 REMARK 470 ASP A 541 CG OD1 OD2 REMARK 470 ASP A 561 CG OD1 OD2 REMARK 470 GLU A 566 CG CD OE1 OE2 REMARK 470 TYR A 572 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 575 CG OD1 OD2 REMARK 470 GLU A 578 CG CD OE1 OE2 REMARK 470 LYS A 580 CG CD CE NZ REMARK 470 GLU A 583 CG CD OE1 OE2 REMARK 470 ASN A 601 CG OD1 ND2 REMARK 470 ASP A 602 CG OD1 OD2 REMARK 470 GLU A 604 CG CD OE1 OE2 REMARK 470 ASP A 607 CG OD1 OD2 REMARK 470 SER A 609 OG REMARK 470 GLU A 612 CG CD OE1 OE2 REMARK 470 GLU A 629 CG CD OE1 OE2 REMARK 470 GLU A 639 CG CD OE1 OE2 REMARK 470 ASN A 640 CG OD1 ND2 REMARK 470 ASP A 643 CG OD1 OD2 REMARK 470 LYS A 644 CG CD CE NZ REMARK 470 GLU A 672 CG CD OE1 OE2 REMARK 470 LYS A 673 CG CD CE NZ REMARK 470 ILE A 687 CG1 CG2 CD1 REMARK 470 ASP A 715 CG OD1 OD2 REMARK 470 GLU A 716 CG CD OE1 OE2 REMARK 470 GLU A 763 CG CD OE1 OE2 REMARK 470 ASN A 777 CG OD1 ND2 REMARK 470 SER A 778 OG REMARK 470 GLN A 779 CG CD OE1 NE2 REMARK 470 GLN A 780 CG CD OE1 NE2 REMARK 470 LEU A 782 CG CD1 CD2 REMARK 470 LYS A 783 CG CD CE NZ REMARK 470 ARG A 784 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 785 CG CD1 CD2 REMARK 470 GLU A 786 CG CD OE1 OE2 REMARK 470 LYS A 787 CG CD CE NZ REMARK 470 SER A 788 OG REMARK 470 LYS A 790 CG CD CE NZ REMARK 470 GLU A 791 CG CD OE1 OE2 REMARK 470 SER A 794 OG REMARK 470 LYS A 795 CG CD CE NZ REMARK 470 ILE A 796 CG1 CG2 CD1 REMARK 470 LYS A 804 CG CD CE NZ REMARK 470 LEU A 805 CG CD1 CD2 REMARK 470 SER A 806 OG REMARK 470 LYS A 807 CG CD CE NZ REMARK 470 ILE A 808 CG1 CG2 CD1 REMARK 470 ASP A 809 CG OD1 OD2 REMARK 470 ASN A 810 CG OD1 ND2 REMARK 470 ASN A 811 CG OD1 ND2 REMARK 470 LEU A 818 CG CD1 CD2 REMARK 470 LYS A 827 CG CD CE NZ REMARK 470 ASP A 828 CG OD1 OD2 REMARK 470 THR A 831 OG1 CG2 REMARK 470 ASP A 833 CG OD1 OD2 REMARK 470 ASP A 834 CG OD1 OD2 REMARK 470 LEU A 835 CG CD1 CD2 REMARK 470 ASP A 836 CG OD1 OD2 REMARK 470 ASP A 838 CG OD1 OD2 REMARK 470 ARG A 839 CG CD NE CZ NH1 NH2 REMARK 470 SER A 841 OG REMARK 470 ASN A 842 CG OD1 ND2 REMARK 470 ASP A 844 CG OD1 OD2 REMARK 470 SER A 866 OG REMARK 470 SER A 867 OG REMARK 470 ASN A 870 CG OD1 ND2 REMARK 470 LYS A 873 CG CD CE NZ REMARK 470 SER A 874 OG REMARK 470 ASP A 875 CG OD1 OD2 REMARK 470 ASP A 876 CG OD1 OD2 REMARK 470 SER A 879 OG REMARK 470 GLU A 881 CG CD OE1 OE2 REMARK 470 LYS A 884 CG CD CE NZ REMARK 470 LYS A 885 CG CD CE NZ REMARK 470 ARG A 886 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 892 CG CD OE1 NE2 REMARK 470 SER A 896 OG REMARK 470 LYS A 897 CG CD CE NZ REMARK 470 ASP A 905 CG OD1 OD2 REMARK 470 GLU A 911 CG CD OE1 OE2 REMARK 470 ASP A 919 CG OD1 OD2 REMARK 470 GLU A 944 CG CD OE1 OE2 REMARK 470 ASN A 948 CG OD1 ND2 REMARK 470 LYS A 949 CG CD CE NZ REMARK 470 LYS A 950 CG CD CE NZ REMARK 470 ASP A 951 CG OD1 OD2 REMARK 470 GLU A 952 CG CD OE1 OE2 REMARK 470 ASN A 953 CG OD1 ND2 REMARK 470 ASN A 954 CG OD1 ND2 REMARK 470 ARG A 955 CG CD NE CZ NH1 NH2 REMARK 470 SER A 967 OG REMARK 470 ASP A 976 CG OD1 OD2 REMARK 470 LYS A1022 CG CD CE NZ REMARK 470 LYS A1030 CG CD CE NZ REMARK 470 ILE A1050 CG1 CG2 CD1 REMARK 470 SER A1051 OG REMARK 470 GLU A1059 CG CD OE1 OE2 REMARK 470 GLU A1068 CG CD OE1 OE2 REMARK 470 GLU A1071 CG CD OE1 OE2 REMARK 470 GLU A1161 CG CD OE1 OE2 REMARK 470 LYS A1162 CG CD CE NZ REMARK 470 LYS A1165 CG CD CE NZ REMARK 470 LYS A1166 CG CD CE NZ REMARK 470 LYS A1167 CG CD CE NZ REMARK 470 ILE A1168 CG1 CG2 CD1 REMARK 470 THR A1169 OG1 CG2 REMARK 470 ASP A1188 CG OD1 OD2 REMARK 470 ASN A1191 CG OD1 ND2 REMARK 470 LEU A1194 CG CD1 CD2 REMARK 470 ASP A1200 CG OD1 OD2 REMARK 470 ASP A1217 CG OD1 OD2 REMARK 470 GLU A1235 CG CD OE1 OE2 REMARK 470 SER A1245 OG REMARK 470 THR A1261 OG1 CG2 REMARK 470 ASN A1263 CG OD1 ND2 REMARK 470 GLU A1264 CG CD OE1 OE2 REMARK 470 ASN A1265 CG OD1 ND2 REMARK 470 GLU A1271 CG CD OE1 OE2 REMARK 470 ASN A1272 CG OD1 ND2 REMARK 470 GLU A1278 CG CD OE1 OE2 REMARK 470 GLU A1286 CG CD OE1 OE2 REMARK 470 LYS A1295 CG CD CE NZ REMARK 470 SER A1303 OG REMARK 470 SER A1307 OG REMARK 470 ASP A1314 CG OD1 OD2 REMARK 470 GLU A1315 CG CD OE1 OE2 REMARK 470 SER A1318 OG REMARK 470 GLU A1327 CG CD OE1 OE2 REMARK 470 ASP A1342 CG OD1 OD2 REMARK 470 ASP A1355 CG OD1 OD2 REMARK 470 ASP A1364 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 22 -61.38 -96.17 REMARK 500 PRO A 28 -177.61 -69.83 REMARK 500 ASP A 199 -120.23 57.26 REMARK 500 LEU A 306 33.89 -92.93 REMARK 500 ILE A 363 -62.93 -94.96 REMARK 500 THR A 404 -169.90 -128.85 REMARK 500 GLU A 583 -125.33 58.32 REMARK 500 ASN A 825 -0.30 70.98 REMARK 500 LYS A1035 -62.79 -93.53 REMARK 500 ARG A1257 35.65 -98.21 REMARK 500 LEU A1331 -4.95 67.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-51787 RELATED DB: EMDB REMARK 900 CAS9 IN COMPLEX WITH TRACRRNA AND CRRNA, STREPTOCOCCUS THERMOPHILUS REMARK 900 DGCC 7710 CRISPR3 SYSTEM DBREF 9H21 A 1 1388 UNP G3ECR1 CAS9_STRTR 22 1409 DBREF 9H21 B -20 21 PDB 9H21 9H21 -20 21 DBREF 9H21 C 1 75 PDB 9H21 9H21 1 75 SEQADV 9H21 LEU A 1389 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 GLU A 1390 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 GLY A 1391 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1392 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1393 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1394 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1395 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1396 UNP G3ECR1 EXPRESSION TAG SEQADV 9H21 HIS A 1397 UNP G3ECR1 EXPRESSION TAG SEQRES 1 A 1397 MET THR LYS PRO TYR SER ILE GLY LEU ASP ILE GLY THR SEQRES 2 A 1397 ASN SER VAL GLY TRP ALA VAL ILE THR ASP ASN TYR LYS SEQRES 3 A 1397 VAL PRO SER LYS LYS MET LYS VAL LEU GLY ASN THR SER SEQRES 4 A 1397 LYS LYS TYR ILE LYS LYS ASN LEU LEU GLY VAL LEU LEU SEQRES 5 A 1397 PHE ASP SER GLY ILE THR ALA GLU GLY ARG ARG LEU LYS SEQRES 6 A 1397 ARG THR ALA ARG ARG ARG TYR THR ARG ARG ARG ASN ARG SEQRES 7 A 1397 ILE LEU TYR LEU GLN GLU ILE PHE SER THR GLU MET ALA SEQRES 8 A 1397 THR LEU ASP ASP ALA PHE PHE GLN ARG LEU ASP ASP SER SEQRES 9 A 1397 PHE LEU VAL PRO ASP ASP LYS ARG ASP SER LYS TYR PRO SEQRES 10 A 1397 ILE PHE GLY ASN LEU VAL GLU GLU LYS VAL TYR HIS ASP SEQRES 11 A 1397 GLU PHE PRO THR ILE TYR HIS LEU ARG LYS TYR LEU ALA SEQRES 12 A 1397 ASP SER THR LYS LYS ALA ASP LEU ARG LEU VAL TYR LEU SEQRES 13 A 1397 ALA LEU ALA HIS MET ILE LYS TYR ARG GLY HIS PHE LEU SEQRES 14 A 1397 ILE GLU GLY GLU PHE ASN SER LYS ASN ASN ASP ILE GLN SEQRES 15 A 1397 LYS ASN PHE GLN ASP PHE LEU ASP THR TYR ASN ALA ILE SEQRES 16 A 1397 PHE GLU SER ASP LEU SER LEU GLU ASN SER LYS GLN LEU SEQRES 17 A 1397 GLU GLU ILE VAL LYS ASP LYS ILE SER LYS LEU GLU LYS SEQRES 18 A 1397 LYS ASP ARG ILE LEU LYS LEU PHE PRO GLY GLU LYS ASN SEQRES 19 A 1397 SER GLY ILE PHE SER GLU PHE LEU LYS LEU ILE VAL GLY SEQRES 20 A 1397 ASN GLN ALA ASP PHE ARG LYS CYS PHE ASN LEU ASP GLU SEQRES 21 A 1397 LYS ALA SER LEU HIS PHE SER LYS GLU SER TYR ASP GLU SEQRES 22 A 1397 ASP LEU GLU THR LEU LEU GLY TYR ILE GLY ASP ASP TYR SEQRES 23 A 1397 SER ASP VAL PHE LEU LYS ALA LYS LYS LEU TYR ASP ALA SEQRES 24 A 1397 ILE LEU LEU SER GLY PHE LEU THR VAL THR ASP ASN GLU SEQRES 25 A 1397 THR GLU ALA PRO LEU SER SER ALA MET ILE LYS ARG TYR SEQRES 26 A 1397 ASN GLU HIS LYS GLU ASP LEU ALA LEU LEU LYS GLU TYR SEQRES 27 A 1397 ILE ARG ASN ILE SER LEU LYS THR TYR ASN GLU VAL PHE SEQRES 28 A 1397 LYS ASP ASP THR LYS ASN GLY TYR ALA GLY TYR ILE ASP SEQRES 29 A 1397 GLY LYS THR ASN GLN GLU ASP PHE TYR VAL TYR LEU LYS SEQRES 30 A 1397 ASN LEU LEU ALA GLU PHE GLU GLY ALA ASP TYR PHE LEU SEQRES 31 A 1397 GLU LYS ILE ASP ARG GLU ASP PHE LEU ARG LYS GLN ARG SEQRES 32 A 1397 THR PHE ASP ASN GLY SER ILE PRO TYR GLN ILE HIS LEU SEQRES 33 A 1397 GLN GLU MET ARG ALA ILE LEU ASP LYS GLN ALA LYS PHE SEQRES 34 A 1397 TYR PRO PHE LEU ALA LYS ASN LYS GLU ARG ILE GLU LYS SEQRES 35 A 1397 ILE LEU THR PHE ARG ILE PRO TYR TYR VAL GLY PRO LEU SEQRES 36 A 1397 ALA ARG GLY ASN SER ASP PHE ALA TRP SER ILE ARG LYS SEQRES 37 A 1397 ARG ASN GLU LYS ILE THR PRO TRP ASN PHE GLU ASP VAL SEQRES 38 A 1397 ILE ASP LYS GLU SER SER ALA GLU ALA PHE ILE ASN ARG SEQRES 39 A 1397 MET THR SER PHE ASP LEU TYR LEU PRO GLU GLU LYS VAL SEQRES 40 A 1397 LEU PRO LYS HIS SER LEU LEU TYR GLU THR PHE ASN VAL SEQRES 41 A 1397 TYR ASN GLU LEU THR LYS VAL ARG PHE ILE ALA GLU SER SEQRES 42 A 1397 MET ARG ASP TYR GLN PHE LEU ASP SER LYS GLN LYS LYS SEQRES 43 A 1397 ASP ILE VAL ARG LEU TYR PHE LYS ASP LYS ARG LYS VAL SEQRES 44 A 1397 THR ASP LYS ASP ILE ILE GLU TYR LEU HIS ALA ILE TYR SEQRES 45 A 1397 GLY TYR ASP GLY ILE GLU LEU LYS GLY ILE GLU LYS GLN SEQRES 46 A 1397 PHE ASN SER SER LEU SER THR TYR HIS ASP LEU LEU ASN SEQRES 47 A 1397 ILE ILE ASN ASP LYS GLU PHE LEU ASP ASP SER SER ASN SEQRES 48 A 1397 GLU ALA ILE ILE GLU GLU ILE ILE HIS THR LEU THR ILE SEQRES 49 A 1397 PHE GLU ASP ARG GLU MET ILE LYS GLN ARG LEU SER LYS SEQRES 50 A 1397 PHE GLU ASN ILE PHE ASP LYS SER VAL LEU LYS LYS LEU SEQRES 51 A 1397 SER ARG ARG HIS TYR THR GLY TRP GLY LYS LEU SER ALA SEQRES 52 A 1397 LYS LEU ILE ASN GLY ILE ARG ASP GLU LYS SER GLY ASN SEQRES 53 A 1397 THR ILE LEU ASP TYR LEU ILE ASP ASP GLY ILE SER ASN SEQRES 54 A 1397 ARG ASN PHE MET GLN LEU ILE HIS ASP ASP ALA LEU SER SEQRES 55 A 1397 PHE LYS LYS LYS ILE GLN LYS ALA GLN ILE ILE GLY ASP SEQRES 56 A 1397 GLU ASP LYS GLY ASN ILE LYS GLU VAL VAL LYS SER LEU SEQRES 57 A 1397 PRO GLY SER PRO ALA ILE LYS LYS GLY ILE LEU GLN SER SEQRES 58 A 1397 ILE LYS ILE VAL ASP GLU LEU VAL LYS VAL MET GLY GLY SEQRES 59 A 1397 ARG LYS PRO GLU SER ILE VAL VAL GLU MET ALA ARG GLU SEQRES 60 A 1397 ASN GLN TYR THR ASN GLN GLY LYS SER ASN SER GLN GLN SEQRES 61 A 1397 ARG LEU LYS ARG LEU GLU LYS SER LEU LYS GLU LEU GLY SEQRES 62 A 1397 SER LYS ILE LEU LYS GLU ASN ILE PRO ALA LYS LEU SER SEQRES 63 A 1397 LYS ILE ASP ASN ASN ALA LEU GLN ASN ASP ARG LEU TYR SEQRES 64 A 1397 LEU TYR TYR LEU GLN ASN GLY LYS ASP MET TYR THR GLY SEQRES 65 A 1397 ASP ASP LEU ASP ILE ASP ARG LEU SER ASN TYR ASP ILE SEQRES 66 A 1397 ASP HIS ILE ILE PRO GLN ALA PHE LEU LYS ASP ASN SER SEQRES 67 A 1397 ILE ASP ASN LYS VAL LEU VAL SER SER ALA SER ASN ARG SEQRES 68 A 1397 GLY LYS SER ASP ASP PHE PRO SER LEU GLU VAL VAL LYS SEQRES 69 A 1397 LYS ARG LYS THR PHE TRP TYR GLN LEU LEU LYS SER LYS SEQRES 70 A 1397 LEU ILE SER GLN ARG LYS PHE ASP ASN LEU THR LYS ALA SEQRES 71 A 1397 GLU ARG GLY GLY LEU LEU PRO GLU ASP LYS ALA GLY PHE SEQRES 72 A 1397 ILE GLN ARG GLN LEU VAL GLU THR ARG GLN ILE THR LYS SEQRES 73 A 1397 HIS VAL ALA ARG LEU LEU ASP GLU LYS PHE ASN ASN LYS SEQRES 74 A 1397 LYS ASP GLU ASN ASN ARG ALA VAL ARG THR VAL LYS ILE SEQRES 75 A 1397 ILE THR LEU LYS SER THR LEU VAL SER GLN PHE ARG LYS SEQRES 76 A 1397 ASP PHE GLU LEU TYR LYS VAL ARG GLU ILE ASN ASP PHE SEQRES 77 A 1397 HIS HIS ALA HIS ASP ALA TYR LEU ASN ALA VAL ILE ALA SEQRES 78 A 1397 SER ALA LEU LEU LYS LYS TYR PRO LYS LEU GLU PRO GLU SEQRES 79 A 1397 PHE VAL TYR GLY ASP TYR PRO LYS TYR ASN SER PHE ARG SEQRES 80 A 1397 GLU ARG LYS SER ALA THR GLU LYS VAL TYR PHE TYR SER SEQRES 81 A 1397 ASN ILE MET ASN ILE PHE LYS LYS SER ILE SER LEU ALA SEQRES 82 A 1397 ASP GLY ARG VAL ILE GLU ARG PRO LEU ILE GLU VAL ASN SEQRES 83 A 1397 GLU GLU THR GLY GLU SER VAL TRP ASN LYS GLU SER ASP SEQRES 84 A 1397 LEU ALA THR VAL ARG ARG VAL LEU SER TYR PRO GLN VAL SEQRES 85 A 1397 ASN VAL VAL LYS LYS VAL GLU GLU GLN ASN HIS GLY LEU SEQRES 86 A 1397 ASP ARG GLY LYS PRO LYS GLY LEU PHE ASN ALA ASN LEU SEQRES 87 A 1397 SER SER LYS PRO LYS PRO ASN SER ASN GLU ASN LEU VAL SEQRES 88 A 1397 GLY ALA LYS GLU TYR LEU ASP PRO LYS LYS TYR GLY GLY SEQRES 89 A 1397 TYR ALA GLY ILE SER ASN SER PHE ALA VAL LEU VAL LYS SEQRES 90 A 1397 GLY THR ILE GLU LYS GLY ALA LYS LYS LYS ILE THR ASN SEQRES 91 A 1397 VAL LEU GLU PHE GLN GLY ILE SER ILE LEU ASP ARG ILE SEQRES 92 A 1397 ASN TYR ARG LYS ASP LYS LEU ASN PHE LEU LEU GLU LYS SEQRES 93 A 1397 GLY TYR LYS ASP ILE GLU LEU ILE ILE GLU LEU PRO LYS SEQRES 94 A 1397 TYR SER LEU PHE GLU LEU SER ASP GLY SER ARG ARG MET SEQRES 95 A 1397 LEU ALA SER ILE LEU SER THR ASN ASN LYS ARG GLY GLU SEQRES 96 A 1397 ILE HIS LYS GLY ASN GLN ILE PHE LEU SER GLN LYS PHE SEQRES 97 A 1397 VAL LYS LEU LEU TYR HIS ALA LYS ARG ILE SER ASN THR SEQRES 98 A 1397 ILE ASN GLU ASN HIS ARG LYS TYR VAL GLU ASN HIS LYS SEQRES 99 A 1397 LYS GLU PHE GLU GLU LEU PHE TYR TYR ILE LEU GLU PHE SEQRES 100 A 1397 ASN GLU ASN TYR VAL GLY ALA LYS LYS ASN GLY LYS LEU SEQRES 101 A 1397 LEU ASN SER ALA PHE GLN SER TRP GLN ASN HIS SER ILE SEQRES 102 A 1397 ASP GLU LEU CYS SER SER PHE ILE GLY PRO THR GLY SER SEQRES 103 A 1397 GLU ARG LYS GLY LEU PHE GLU LEU THR SER ARG GLY SER SEQRES 104 A 1397 ALA ALA ASP PHE GLU PHE LEU GLY VAL LYS ILE PRO ARG SEQRES 105 A 1397 TYR ARG ASP TYR THR PRO SER SER LEU LEU LYS ASP ALA SEQRES 106 A 1397 THR LEU ILE HIS GLN SER VAL THR GLY LEU TYR GLU THR SEQRES 107 A 1397 ARG ILE ASP LEU ALA LYS LEU GLY GLU GLY LEU GLU GLY SEQRES 108 A 1397 HIS HIS HIS HIS HIS HIS SEQRES 1 B 42 C G C U A A A G A G G A A SEQRES 2 B 42 G A G G A C A G U U U U A SEQRES 3 B 42 G A G C U G U G U U G U U SEQRES 4 B 42 U C G SEQRES 1 C 75 C G A A A C A A C A C A G SEQRES 2 C 75 C G A G U U A A A A U A A SEQRES 3 C 75 G G C U U A G U C C G U A SEQRES 4 C 75 C U C A A C U U G A A A A SEQRES 5 C 75 G G U G G C A C C G A U U SEQRES 6 C 75 C G G U G U U U U U HET CA C 101 1 HETNAM CA CALCIUM ION FORMUL 4 CA CA 2+ HELIX 1 AA1 GLU A 60 ALA A 91 1 32 HELIX 2 AA2 ALA A 96 ASP A 103 1 8 HELIX 3 AA3 ASN A 121 PHE A 132 1 12 HELIX 4 AA4 THR A 134 SER A 145 1 12 HELIX 5 AA5 ASP A 150 TYR A 164 1 15 HELIX 6 AA6 ASP A 180 PHE A 196 1 17 HELIX 7 AA7 ASN A 204 LYS A 215 1 12 HELIX 8 AA8 SER A 217 PHE A 229 1 13 HELIX 9 AA9 ILE A 237 VAL A 246 1 10 HELIX 10 AB1 SER A 287 LEU A 306 1 20 HELIX 11 AB2 ALA A 315 SER A 343 1 29 HELIX 12 AB3 LEU A 344 ASP A 353 1 10 HELIX 13 AB4 GLY A 358 ASP A 364 1 7 HELIX 14 AB5 ASN A 368 PHE A 383 1 16 HELIX 15 AB6 ALA A 386 ARG A 395 1 10 HELIX 16 AB7 THR A 404 ILE A 410 5 7 HELIX 17 AB8 PRO A 411 ALA A 427 1 17 HELIX 18 AB9 TYR A 430 ASN A 436 1 7 HELIX 19 AC1 ASN A 436 PHE A 446 1 11 HELIX 20 AC2 ASP A 483 THR A 496 1 14 HELIX 21 AC3 SER A 512 LYS A 526 1 15 HELIX 22 AC4 ASP A 541 PHE A 553 1 13 HELIX 23 AC5 THR A 560 TYR A 572 1 13 HELIX 24 AC6 LEU A 590 ASN A 601 1 12 HELIX 25 AC7 ASP A 602 ASP A 608 1 7 HELIX 26 AC8 ASN A 611 PHE A 625 1 15 HELIX 27 AC9 ASP A 627 LYS A 637 1 11 HELIX 28 AD1 ASP A 643 ARG A 653 1 11 HELIX 29 AD2 ALA A 663 GLY A 668 1 6 HELIX 30 AD3 THR A 677 ASP A 684 1 8 HELIX 31 AD4 ASN A 691 HIS A 697 1 7 HELIX 32 AD5 SER A 702 GLY A 719 1 18 HELIX 33 AD6 ASN A 720 SER A 727 1 8 HELIX 34 AD7 SER A 731 MET A 752 1 22 HELIX 35 AD8 GLN A 780 GLY A 793 1 14 HELIX 36 AD9 LYS A 795 ASN A 800 1 6 HELIX 37 AE1 ASN A 815 GLN A 824 1 10 HELIX 38 AE2 SER A 858 ASP A 860 5 3 HELIX 39 AE3 SER A 867 GLY A 872 5 6 HELIX 40 AE4 SER A 879 SER A 896 1 18 HELIX 41 AE5 SER A 900 THR A 908 1 9 HELIX 42 AE6 LEU A 916 VAL A 929 1 14 HELIX 43 AE7 ARG A 932 ASN A 947 1 16 HELIX 44 AE8 ASN A 948 LYS A 950 5 3 HELIX 45 AE9 SER A 967 PHE A 977 1 11 HELIX 46 AF1 ASP A 987 TYR A 1008 1 22 HELIX 47 AF2 LEU A 1011 VAL A 1016 1 6 HELIX 48 AF3 ASN A 1024 LYS A 1035 1 12 HELIX 49 AF4 GLU A 1077 LEU A 1087 1 11 HELIX 50 AF5 ASP A 1138 GLY A 1143 1 6 HELIX 51 AF6 ASP A 1181 ASP A 1188 1 8 HELIX 52 AF7 ASP A 1188 LYS A 1196 1 9 HELIX 53 AF8 SER A 1245 ARG A 1257 1 13 HELIX 54 AF9 GLU A 1264 HIS A 1273 1 10 HELIX 55 AG1 LYS A 1274 TYR A 1291 1 18 HELIX 56 AG2 ALA A 1294 GLN A 1306 1 13 HELIX 57 AG3 SER A 1312 ILE A 1321 1 10 HELIX 58 AG4 THR A 1357 LEU A 1362 1 6 SHEET 1 AA1 4 SER A 6 ILE A 11 0 SHEET 2 AA1 4 VAL A 16 ILE A 21 -1 O ALA A 19 N GLY A 8 SHEET 3 AA1 4 LEU A 48 LEU A 52 -1 O GLY A 49 N TRP A 18 SHEET 4 AA1 4 ASN A1093 LYS A1096 1 O VAL A1095 N LEU A 52 SHEET 1 AA2 7 TYR A 42 ASN A 46 0 SHEET 2 AA2 7 SER A 29 GLY A 36 -1 N MET A 32 O ILE A 43 SHEET 3 AA2 7 GLU A1377 ASP A1381 1 O ARG A1379 N LEU A 35 SHEET 4 AA2 7 ALA A1365 GLN A1370 -1 N LEU A1367 O ILE A1380 SHEET 5 AA2 7 SER A1211 LEU A1215 -1 N GLU A1214 O THR A1366 SHEET 6 AA2 7 ARG A1220 ILE A1226 -1 O LEU A1223 N SER A1211 SHEET 7 AA2 7 GLY A1234 LYS A1238 -1 O HIS A1237 N MET A1222 SHEET 1 AA3 2 VAL A 507 PRO A 509 0 SHEET 2 AA3 2 TRP A 658 SER A 662 -1 O GLY A 659 N LEU A 508 SHEET 1 AA4 3 GLN A 538 PHE A 539 0 SHEET 2 AA4 3 ARG A 528 PHE A 529 -1 N PHE A 529 O GLN A 538 SHEET 3 AA4 3 LEU A 579 LYS A 580 -1 O LYS A 580 N ARG A 528 SHEET 1 AA5 2 ASP A 844 HIS A 847 0 SHEET 2 AA5 2 LYS A 862 VAL A 865 -1 O VAL A 863 N ASP A 846 SHEET 1 AA6 2 SER A1049 SER A1051 0 SHEET 2 AA6 2 VAL A1057 GLU A1059 -1 O ILE A1058 N ILE A1050 SHEET 1 AA7 2 ILE A1063 VAL A1065 0 SHEET 2 AA7 2 SER A1072 ASN A1075 -1 O VAL A1073 N GLU A1064 SHEET 1 AA8 2 GLY A1104 ASP A1106 0 SHEET 2 AA8 2 LYS A1109 LYS A1111 -1 O LYS A1109 N ASP A1106 SHEET 1 AA9 2 VAL A1131 GLY A1132 0 SHEET 2 AA9 2 GLY A1144 TYR A1145 -1 O TYR A1145 N VAL A1131 SHEET 1 AB1 3 ILE A1168 SER A1178 0 SHEET 2 AB1 3 ASN A1150 GLU A1161 -1 N VAL A1154 O GLN A1175 SHEET 3 AB1 3 ASP A1200 LEU A1207 -1 O ILE A1205 N LEU A1155 SHEET 1 AB2 2 PHE A1343 GLU A1344 0 SHEET 2 AB2 2 LYS A1349 ILE A1350 -1 O ILE A1350 N PHE A1343 LINK OP1 U C 24 CA CA C 101 1555 1555 2.09 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT1102512068 CONECT1206811025 MASTER 446 0 1 58 31 0 0 612065 3 2 118 END